mRNA_10470 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|349794
Unique Name	mRNA_10470
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|349794 vs. uniprot
Match: A0A836CBZ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBZ3_9STRA)

HSP 1 Score: 1042 bits (2694), Expect = 0.000e+0
Identity = 515/515 (100.00%), Postives = 515/515 (100.00%), Query Frame = 1

Query:    1 MSYSWAQARLILSVLLLLGAHVWAFTPAALTPCQVARNPFSGIAPKRVYGPGSAVRRAAASYSSSPHVYYFNDSDDDDYDEFAGTYCGETYSGRDWMPPLACEDTRNADALTGLSIAVGLPLLVVTAPTFLNSAHLMANDAHRERMRRLKEQEQRPGFATLRVAFFHPEADAAEPSRDAASTPTTCVSDIPVRRRTSKLPGGTWCKTCSDAQYIDGQLRATCARKYGRESRISTVRALPEDEVVNEDGLLVNTTNYGGCTEGGELPGGTWCNSCIDATYVNGELSARCKGQYGRLWDNVRALPSDYVEYDGRRLINRTDYATDDLEVTASVGAAHAAPTVMAALSALAADPALPNNPRLLTRTCAELLRREARWVAVAGGIQQGSEEETDALLQRAVAQERTKWSAEVMTNIQGEEQRAPPPFPAAPVSTYAVVTLLLRWEHTPPGAHRFLQAPLWFGRSRVKDAAEARQLLLWLLSNAHELRLRDVEVLWSPAEAGDVMTEAEAYRKWPELRHG 1545
            MSYSWAQARLILSVLLLLGAHVWAFTPAALTPCQVARNPFSGIAPKRVYGPGSAVRRAAASYSSSPHVYYFNDSDDDDYDEFAGTYCGETYSGRDWMPPLACEDTRNADALTGLSIAVGLPLLVVTAPTFLNSAHLMANDAHRERMRRLKEQEQRPGFATLRVAFFHPEADAAEPSRDAASTPTTCVSDIPVRRRTSKLPGGTWCKTCSDAQYIDGQLRATCARKYGRESRISTVRALPEDEVVNEDGLLVNTTNYGGCTEGGELPGGTWCNSCIDATYVNGELSARCKGQYGRLWDNVRALPSDYVEYDGRRLINRTDYATDDLEVTASVGAAHAAPTVMAALSALAADPALPNNPRLLTRTCAELLRREARWVAVAGGIQQGSEEETDALLQRAVAQERTKWSAEVMTNIQGEEQRAPPPFPAAPVSTYAVVTLLLRWEHTPPGAHRFLQAPLWFGRSRVKDAAEARQLLLWLLSNAHELRLRDVEVLWSPAEAGDVMTEAEAYRKWPELRHG
Sbjct:    1 MSYSWAQARLILSVLLLLGAHVWAFTPAALTPCQVARNPFSGIAPKRVYGPGSAVRRAAASYSSSPHVYYFNDSDDDDYDEFAGTYCGETYSGRDWMPPLACEDTRNADALTGLSIAVGLPLLVVTAPTFLNSAHLMANDAHRERMRRLKEQEQRPGFATLRVAFFHPEADAAEPSRDAASTPTTCVSDIPVRRRTSKLPGGTWCKTCSDAQYIDGQLRATCARKYGRESRISTVRALPEDEVVNEDGLLVNTTNYGGCTEGGELPGGTWCNSCIDATYVNGELSARCKGQYGRLWDNVRALPSDYVEYDGRRLINRTDYATDDLEVTASVGAAHAAPTVMAALSALAADPALPNNPRLLTRTCAELLRREARWVAVAGGIQQGSEEETDALLQRAVAQERTKWSAEVMTNIQGEEQRAPPPFPAAPVSTYAVVTLLLRWEHTPPGAHRFLQAPLWFGRSRVKDAAEARQLLLWLLSNAHELRLRDVEVLWSPAEAGDVMTEAEAYRKWPELRHG 515

[Close]

BLAST of jgi.p|Trimin1|349794 vs. uniprot
Match: A0A6J4KE34_9CYAN (Uncharacterized protein n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A6J4KE34_9CYAN)

HSP 1 Score: 62.4 bits (150), Expect = 2.710e-7
Identity = 51/156 (32.69%), Postives = 73/156 (46.79%), Query Frame = 1

Query: 1075 LLTRTCAELLRREARWVAVAGGIQQ-GSEEETDALLQRAVAQERTKWSAEVMTNIQGE-EQRAPPPFPAAPVSTYAVVTLLLRWEHTPPGAHRFLQAPLWFGRSRVKDAAEARQLLLWLLSNAHELRLRDVEVLWSPAEAGDVMTEAEAYRKWPEL 1536
            LL  T + LL     W  V  G Q   S E+ +AL  +   QER+K+SAE +TN+ G   Q+AP   P++  S Y VVTLLL      P  +        +  S ++D  E   LL           L   E+LW+P +  D +TEA+    + +L
Sbjct:   62 LLQETASTLLENADFWTHVLAGSQTVDSREQAEALFNQYSIQERSKFSAETLTNVNGVVSQKAPVATPSSEQSAYVVVTLLLGTADDAPLFNEI------YSTSLLRDVLEEITLL-------RSRFLLVFELLWTPQDVTDSLTEADLASDYADL 204

[Close]

BLAST of jgi.p|Trimin1|349794 vs. uniprot
Match: UPI00198BC1EE (DUF1517 domain-containing protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=UPI00198BC1EE)

HSP 1 Score: 55.5 bits (132), Expect = 6.120e-5
Identity = 53/170 (31.18%), Postives = 74/170 (43.53%), Query Frame = 1

Query: 1036 ALAADPALPNNP-RLLTRTCAELLRREARWVAVAGGIQQ-GSEEETDALLQRAVAQERTKWSAEVMTNIQGEEQRAPP-PFPAAPVSTYAVVTLLLRWEHTPPGAHRFLQAPLWFGRSRVKDAAEARQLLLWLLSNAHELRLRDVEVLWSPAEAGDVMTEAEAYRKWPEL 1536
            AL A+ A P     LL  T + LL     W  V  G Q   S E  +AL  +   QER K+SAE +TN+ G   + PP P  +   + Y VVTLLL      P  +      L   R  ++D    R   L +            E+LW+P +  D +TEA+    + +L
Sbjct:   48 ALRANTATPEGLFELLQETASVLLENVDFWTHVLAGSQTVDSREAGEALFNKFSLQERAKFSAETLTNVNGVVSQQPPLPRGSGDHAAYIVVTLLLGTADDAPLFNEIYSTSLL--RDVLRDITTLRSRFLLVF-----------ELLWTPQDPIDSLTEADLASDYADL 204

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|349794 vs. uniprot

BLAST of jgi.p|Trimin1|349794 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A836CBZ3_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A6J4KE34_9CYAN	2.710e-7	32.69	Uncharacterized protein n=3 Tax=Cyanobacteria TaxI...	[more]
UPI00198BC1EE	6.120e-5	31.18	DUF1517 domain-containing protein n=1 Tax=Verrucom...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_49	contig	Contig_49:520311..527195 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|349794\|estExt_Genemark1.C_Ctg_490051
Description	membrane
COG category	S
Max annot lvl	1117\|Cyanobacteria
EggNOG OGs	COG4371@1\|root,COG4371@2\|Bacteria,1G17I@1117\|Cyanobacteria,1GYFV@1129\|Synechococcus
Evalue	1.78e-05
Seed ortholog	195250.CM001776_gene3637
Hectar predicted targeting category	chloroplast
Ec32 ortholog description	Protein of unknown function DUF1517
Ec32 ortholog	Ec-21_001970.1
TranscriptId	350116
Track	FilteredModels1
ProteinId	349794

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|349794	gene_10470	Tribonema minus UTEX_B_3156	gene	Contig_49 520311..527195 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|349794	Trimin1\|349794\|estExt_Genemark1.C_Ctg_490051	Tribonema minus UTEX_B_3156	polypeptide	Contig_49 520311..526530 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_10470_1	exon_10470_1	Tribonema minus UTEX_B_3156	exon	Contig_49 520311..520492 +
exon_10470_2	exon_10470_2	Tribonema minus UTEX_B_3156	exon	Contig_49 521543..521887 +
exon_10470_3	exon_10470_3	Tribonema minus UTEX_B_3156	exon	Contig_49 522954..523115 +
exon_10470_4	exon_10470_4	Tribonema minus UTEX_B_3156	exon	Contig_49 523409..523606 +
exon_10470_5	exon_10470_5	Tribonema minus UTEX_B_3156	exon	Contig_49 524323..524444 +
exon_10470_6	exon_10470_6	Tribonema minus UTEX_B_3156	exon	Contig_49 525700..525892 +
exon_10470_7	exon_10470_7	Tribonema minus UTEX_B_3156	exon	Contig_49 526185..527195 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_10470	CDS_10470	Tribonema minus UTEX_B_3156	CDS	Contig_49 520311..520492 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_10470	UTR3_10470	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_49 526531..527195 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_49:520311..527195+
coding sequence from alignment at Contig_49:520311..527195+

spliced messenger RNA

>mRNA_10470 ID=mRNA_10470|Name=jgi.p|Trimin1|349794|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2213bp|location=Sequence derived from alignment at Contig_49:520311..527195+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGAGCTATAGCTGGGCTCAAGCGCGACTGATTCTCAGCGTCCTCCTGCT
GCTAGGGGCACACGTCTGGGCCTTCACGCCTGCAGCTCTGACGCCCTGCC
AGGTCGCCAGGAATCCTTTCTCAGGAATCGCGCCAAAGCGCGTATATGGG
CCCGGCTCTGCCGTTCGGCGCGCGGCAGCCAGCTACAGCAGCAGCCCCCA
TGTGTACTACTTCAACGACAGTGACGACGACGACTACGACGAGTTTGCCG
GCACGTACTGCGGCGAGACGTACAGCGGGCGCGACTGGATGCCGCCCCTC
GCGTGCGAGGACACGCGCAATGCCGACGCGCTGACGGGGCTGTCCATCGC
CGTCGGGCTGCCCTTGCTTGTGGTGACAGCGCCTACATTCCTCAATAGCG
CACACCTTATGGCCAACGACGCTCACCGCGAGCGCATGCGGCGGCTCAAG
GAGCAAGAGCAGCGCCCCGGCTTTGCCACGCTGCGCGTCGCTTTTTTCCA
CCCCGAGGCGGACGCCGCGGAGCCGAGCCGGGACGCCGCGAGCACCCCTA
CCACCTGCGTTTCTGACATTCCAGTTCGACGCCGCACGTCAAAGTTGCCT
GGCGGCACGTGGTGCAAGACCTGCAGCGACGCTCAGTACATCGATGGCCA
GCTGAGGGCGACCTGCGCCCGCAAGTATGGGCGGGAGAGCCGCATAAGCA
CTGTCCGAGCGCTGCCAGAGGATGAGGTCGTCAATGAAGACGGCCTGTTG
GTCAACACGACCAACTACGGGGGTTGCACCGAGGGAGGGGAGCTGCCCGG
CGGCACCTGGTGCAACTCGTGCATCGACGCCACTTACGTGAATGGCGAGC
TGAGCGCCCGCTGCAAGGGCCAGTACGGGAGACTCTGGGACAACGTGCGA
GCGCTCCCTTCGGACTATGTGGAGTATGATGGTCGCCGCCTCATCAACCG
CACCGACTATGCAACAGATGACCTGGAAGTGACGGCATCGGTGGGGGCAG
CGCATGCGGCACCCACGGTCATGGCAGCGCTCAGCGCCCTGGCCGCCGAC
CCCGCCCTGCCCAACAACCCGCGCCTGCTGACGCGCACCTGCGCGGAGCT
GCTGCGGCGGGAGGCGCGGTGGGTGGCGGTGGCGGGGGGCATCCAGCAGG
GCTCTGAGGAGGAGACGGATGCGCTGCTGCAGCGCGCGGTTGCTCAGGAG
AGGACCAAGTGGAGCGCGGAAGTGATGACCAACATCCAGGGGGAGGAGCA
GCGCGCTCCCCCGCCTTTCCCTGCAGCACCCGTCAGCACGTACGCGGTGG
TGACTCTCCTGCTGCGCTGGGAGCACACTCCGCCCGGCGCGCACCGCTTC
CTCCAGGCGCCGCTGTGGTTTGGGCGCAGCCGCGTGAAGGACGCCGCGGA
GGCGCGGCAGCTGCTGCTGTGGCTGCTGAGCAATGCGCACGAGCTGCGCC
TGCGCGACGTGGAGGTGCTGTGGTCGCCCGCGGAGGCCGGCGACGTCATG
ACGGAGGCGGAGGCGTACCGCAAGTGGCCGGAGCTGCGCCATGGCTGACT
CGGAGACAGGCGGTGACATGGGCGGCAACGGCAGACTGTCGGACGGCGCG
CGCTGTGGCACTGCTCAGTGACCGGCAGCAGCGTCGGCGGCATTTTGCTT
CGACCCGCTCACGCCGCAGCAGCAGCCTCGGCAGATGCAGGGTGTATGTA
GGTGCTGCACGAGCGCTGAGCGCGGCTGCGGTTGCATGACAGTACGCTGC
ACGGGCTTGGCGGCGATGCTCCTGCATCCACTTGATGGCATGCGCGTGGC
CGTTGTCAGAGGTGTATGATACCCCCCCACCCCCCAGGTTTAGAGCAATA
GATCTGAATGTGCTTGCAGTGTGCAGCAGTCACGACAGGCTGGCGACTGT
ATTCTGATGGAGACCGCAAGGGATTGAAGTAGGACACGTGGCGGCGGGTG
GACAGGGATTGTGCAGAGCGAGATCAAACCAGCATCTTCGACTTTTGCAC
ATGTGTGCTGGTGCTGACCCTTTCGGCCCCATTTTTCATACATTTTCAGA
TTTCGCGCATTAGTGCAAGGGTTTCAATTCATTGGGCGCCCCCGCGAATA
CATTAGGTACAGGAGCTCCGTTTGTGCCTGGGACTGCTAGAGACAGCAAT
GGGGAGCAGCATCTTATGTCATTTTATACACCTTCATCTGACACAATGCG
ACAGGTGGCGGCA

protein sequence of jgi.p|Trimin1|349794

>Trimin1|349794|estExt_Genemark1.C_Ctg_490051 ID=Trimin1|349794|estExt_Genemark1.C_Ctg_490051|Name=jgi.p|Trimin1|349794|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=516bp
MSYSWAQARLILSVLLLLGAHVWAFTPAALTPCQVARNPFSGIAPKRVYG
PGSAVRRAAASYSSSPHVYYFNDSDDDDYDEFAGTYCGETYSGRDWMPPL
ACEDTRNADALTGLSIAVGLPLLVVTAPTFLNSAHLMANDAHRERMRRLK
EQEQRPGFATLRVAFFHPEADAAEPSRDAASTPTTCVSDIPVRRRTSKLP
GGTWCKTCSDAQYIDGQLRATCARKYGRESRISTVRALPEDEVVNEDGLL
VNTTNYGGCTEGGELPGGTWCNSCIDATYVNGELSARCKGQYGRLWDNVR
ALPSDYVEYDGRRLINRTDYATDDLEVTASVGAAHAAPTVMAALSALAAD
PALPNNPRLLTRTCAELLRREARWVAVAGGIQQGSEEETDALLQRAVAQE
RTKWSAEVMTNIQGEEQRAPPPFPAAPVSTYAVVTLLLRWEHTPPGAHRF
LQAPLWFGRSRVKDAAEARQLLLWLLSNAHELRLRDVEVLWSPAEAGDVM
TEAEAYRKWPELRHG*

mRNA from alignment at Contig_49:520311..527195+

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_10470 ID=mRNA_10470|Name=jgi.p|Trimin1|349794|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6885bp|location=Sequence derived from alignment at Contig_49:520311..527195+ (Tribonema minus UTEX_B_3156 )
ATGAGCTATAGCTGGGCTCAAGCGCGACTGATTCTCAGCGTCCTCCTGCT
GCTAGGGGCACACGTCTGGGCCTTCACGCCTGCAGCTCTGACGCCCTGCC
AGGTCGCCAGGAATCCTTTCTCAGGAATCGCGCCAAAGCGCGTATATGGG
CCCGGCTCTGCCGTTCGGCGCGCGGCAGCCAGGTGCATCGCTCCGCCTGA
GCCGATCCAGAGTGCGTCAAAGCTATCATTGGAGCATGGACGTACTGGTG
AACCAAAGATAACAGCAGAGGCGGTCGCTGCCACGTGGCTGCTGAAAAGT
GTTGCAGTGGCCCTGGTGGTGATGCAGATTGCCCTGGGGGCTGTTATGCC
TGCAGTGGCGGCTAGCACTGGCGGGAGAATCAGATCCAGCAGCGGGCATA
GCTCGTACAGCAGCGGTAGCCGCAGCAGCAGCAGCCGCAGCAGCAGCAGC
AGCCGCAGCAGCAGCGGCAGCCGCAGCAGCTACAGCAGCGGCGGTCATAG
CACTGGCAGTTACAGCACCGGCAGCAGCTACCATCCTTCTAGCAGTTATG
GATCCAGCTCTTATCATGACAGCTCCAGGTATGGCAGCCAAATCACATAC
ATCTGGTCTGGCTGCTTGTGCGCGCGGTAGATATGATAGTAAGCTCATGA
GTGCAGTAGTAGTACATCAGCCGATGATTGTGTGGGAGTTAACAGAGTAT
GTTAGCATGCACGTCTTCAAGTTGGGTATGCCCGAAAGCATCTCGAGTAT
ACACTGAAGTATTCCAGTGTACATGCGCAGTGCCACACACGGTTGATAGA
AAGCCTGTACTAAGGGAACTACTATTTGGCCTGGATACCTCAAAACATAA
CTTACATAACTGTTACATTTGAATATTCCTTTGCTAGTTTGGTAAGGAAT
CTGCCTTGCTTGGTGCACCAGAAGGCACGTGCTGTACAGCTGTCACTGTG
CAGACAGGGCATTCAAAGTTTCCAGGCAGATACTATCGAAGCGCTGAGCA
AGTGTCCCCAACGATAGCTGTCATTGCTGCACTGGCCACCCCAACTTAAA
TGCGCCACATTAACGTAATTTCGGGCCCACATGCCCTTGAAAGCACATCA
GGAGAGAGTGCATGCCTCGCAGTGCATGCATCCCAACTCGAAGTCCCATG
CCAGAGGCTCCACCCTCACCAGCGCTTCCTCTGCCCGCCTCCCCCCCCCC
CCCCTTCCATCGCGCACCCTCTGTGTGACCAGCTACAGCAGCAGCCCCCA
TGTGTACTACTTCAACGACAGTGACGACGACGACTACGACGAGTTTGCCG
GCACGTACTGCGGCGAGACGTACAGCGGGCGCGACTGGATGCCGCCCCTC
GCGTGCGAGGACACGCGCAATGCCGACGCGCTGACGGGGCTGTCCATCGC
CGTCGGGCTGCCCTTGCTTGTGGTGACAGCGCCTACATTCCTCAATAGCG
CACACCTTATGGCCAACGACGCTCACCGCGAGCGCATGCGGCGGCTCAAG
GAGCAAGAGCAGCGCCCCGGCTTTGCCACGCTGCGCGTCGCTTTTTTCCA
CCCCGAGGCGGACGCCGCGGAGCCGAGGTAAGCGGAGCAGTGCTGCTAGC
CCTAGCCCTAGCCTTGGTGCCATGGTGCATGTCAGCAGGTTGTGGTGAGA
TGTGAAGGTGCTGCCTAGGCCGGGGCTCAAGTTAGCTGCTTAGGCCATGG
CGCAGCTTACAAAGTTGCTGATGAGACCGCGCGAGTGTGTCTTCGCTGTG
CATCCGTCAAGTGAGGTTATGTAATGCCATGATGGTAGCAAAGTGTGCTC
AGTGCCAAATCACTTCATGTCATGCAATTTCCTAGTGTGATCGGCTGTCT
CGTGATGTTCCTTGTTATGGTGCAAATCAGCAATGCACTGATGCAAAGCT
GCGCCAGCTTTTACAGCTCTGTTGCTGCAAGGGTTGCCGTGTGTGGCTGC
ATCCATGCTCGACATGTAGCCCGCACAGGCTCGCTGCTACCGGGAGGGCC
CGAACAATGCTAGGTGTCCAATACATTCATGCAGCGGGCACACGCAGGGC
TGCTTTCACGACAACCACCTCAGGGGCACCTTGGCCATGCACCTTCTGTA
CTTGTGGACTTGTATTTATTCTCTTCACCCCTGTGTTCTTGAGCGTTGCG
TAGGAACATTGTATTGTCTCCCCCCCCCCCCGCCTTTGACTCTCACGGCA
ACCTAACCTAATCCGGCGCCATGCATGCGCCCGGGCAAGTGAGAATCAGA
CGCTCAGTGGTGCTCAGCAATGCAAACTCAAATAATTTAGTCAAATTGCT
TATGAACGAATGGGCAAGTGAACGCTGTTGGATGGCGATTTTCAAATCGA
GATCCTTGCTGCACCTCAGACTTGGTGAGTGCTGCGGCAACTGACTTGTT
TAATACGTCAGATTTGTACACAACAGTCTCTCCTCGCGACTTGCTGCAGA
GCGTTCTCGGGCCGTAGTATGCGAGCGCCTGCATCAAAGCATACTGACTG
TCCTCAAGGCACAGCAAGGTTTGTTGCACAACTCTTCCGTTGAAGCGTCC
GCGTGCCTTAGCCTGTAATCACACCCCGGTGGCGGTCTGGAATTTCAACT
TCACCTAGTGTGCTCGGTTTGTGCGGTGCCGCCTGCAACGCAGCCGGGAC
GCCGCGAGCACCCCTACCACCTGCGTTTCTGACATTCCAGTTCGACGCCG
CACGTCAAAGTTGCCTGGCGGCACGTGGTGCAAGACCTGCAGCGACGCTC
AGTACATCGATGGCCAGCTGAGGGCGACCTGCGCCCGCAAGTATGGGCGG
GAGAGGTAATGTGGCCGTCTGCGCATTGTCTGTTTTTGATTGGAAACGAA
TCAGAAGATCGTAGAGCTCTAGGTGACAAGGGATGGTCAGCCGCAAGCGC
CTTCCACCAATAACCGTGGTCGCCGCTGCTGCAGTCATTGGCCACGAGTC
AAACAGTGATGACATGTGCATCCGGTGGTCGTTCAACAAATGCTCAGCCA
GTGCTCAACAGGTACAGGTTGTGGACGCAACATACGACTCCTCGCGACCC
GTTTACGTTGACATCACGTGCATACCTACCCCTACCCCCCCCCCACAGCC
GCATAAGCACTGTCCGAGCGCTGCCAGAGGATGAGGTCGTCAATGAAGAC
GGCCTGTTGGTCAACACGACCAACTACGGGGGTTGCACCGAGGGAGGGGA
GCTGCCCGGCGGCACCTGGTGCAACTCGTGCATCGACGCCACTTACGTGA
ATGGCGAGCTGAGCGCCCGCTGCAAGGGCCAGTACGGGAGACTCTGGTGA
GGCGCCTGAGAAGGGTCACTGCAACAACGGTGCAGTCTAGTGAAGAGGGA
GCTGGTCTTGAAAGTGGCGCTGCAGTGCTTGTTGAGTGCTGTGGAGTGCA
CGGCGGCATTGCTGTGCGTGTTCAAGTTGCTGCTGACGCATGGGTGTACA
AGGGCACCGTAGGGCAACAGGTAGATGCCGCAGCAGCAAATGGTGCAGTG
CTGCGCAGTGTGACTTCATGGGCGGACTAACATGGGTCCCGGAGCACTGC
TGCAGCGGCGGGTGAGTGATGTGTGCATTCGGCCGCCAGATCGCTGCTGA
AAGTGTGATTTGGTGGGTCAAAGTGTACATACCATGGGTGATACGTGAGC
ACGTGCATGGGGTATGGCACTCCTTCTGTTTCACCGCATCAGTGACCACT
TGCTGCATGCATCACTGCTTAGCTCAGCGCGAAAAACACATGGCATGATA
CCTTGCCCACTGACGCAGGCGCTCCACCAGGCGAATATGCAAGCTCGCTG
GCCCCGATTATGTCGCAAGGCAGCAGCTGCGCACTGCAAAGAAAAGTGCG
GGCGACATGTGTAATTCTTGTAACTTGAACTTGTGAAATGGCACTGAGCG
GGATGCCTCATCAGCATCATCAGCCTCATCTATCATGACATTACAGGACT
CTTCAGCAGGCAAAACCAGTTGTTCACGTGACCGTCGCCGCTTGATTGTG
TTCCAACTGCAGGGACAACGTGCGAGCGCTCCCTTCGGACTATGTGGAGT
ATGATGGTCGCCGCCTCATCAACCGCACCGACTATGCAACAGATGACCTG
GAAGTGACGGCATCGGTGGGGGCAGCGCATGCGGGTATGTACATAACTTC
ATGTATGGAAGTACATGTGTGCGTTGAACTAAGGAGTCCTTAAAGGCCAG
TCTGCCCCCATGTTGCAAAATGATCAGCACACTACAGTGACTTGTTCTTG
GGCGTTGCGTGGCCGTTTGCCATTAGCAGCACTACATTGGGTCACTAGAT
GTGTGCCACGCCAGAGACCACACTTGTGTCACACATCAAAAAAAGCCTTC
CATGAGCCGGAACTCCTTGACCGGGTGTACTTCCGATGTGTAATACTTCG
AAGTATTCTTCAACAGATAGTCCGTGGCAGGCAAGTACCACGCATCATCC
TGCAACGCTCCCGCTGATGACATGAATGACGTGGTCGCGTCCACTTCTGC
TGTTTTCAGGAACTGTTGCAACACGGACTACCTGTTTGCCGCTTCAGTGC
ACAATTCCGTCATGTGTGGCAGAGCAGACTGAATTTCAAGCAATGCAGGC
CAGCATTTTTGTGACATCATGAACGAGTAATTACCAAGTAGTTTAGCAAC
TCTAGCCCTACTCAAACCCCTCTACCAATGCCCATGTCATGGCTGCATGC
ACTGATCTAGCCGAGCGCTGAGCCCTATAGTAGCACTCCCCAAGTAGTTG
CAGCATGTGCACCAATAAAATGTTCCCATCCCCCAGCTCTTGCCATTATG
TCCTTGCAGTGCTCACTGCAGCAGCAGCCCCGCTCGTCACCCTTAACCCG
ATACCCCGTCTTTGCAATATTTCTGACCTCAGCCCTGCGCCCCATGGCCA
TGGCAGTGCTCAGCACCCTGGCAGCCGACATGAGCTCTGCAATCGTCATA
TCAAGGCCCGTAACCCTGTCCCAACCCTCGCCGAGACGTCTTGCAGTGCT
CACAGCACCAGCAGCACCACCCCTCCATTAAGCCAGTACTTGACCCTGAT
TCCTAACCCAGCACCAGCAATACCAACCGTACATTAAGCCAGTGCTTCAT
CCCTGATTTCTGAGCTCCCCTCCCCCCCGCCGCCCACAGTCATGGCAACA
CAAACCCTCAATAAGCCAGTACTTCACCCTGATTTCTGACCTAGCCACAG
CAACGCCAACCCTGCATCAAGCCAGTACTTCTGAACCACCTGATTCCCGA
CCTTCGCCCCCCTGCAGCGCCCGCGGTCATGGCAGCGCTCAGCGCCCTGG
CCGCCGACCCCGCCCTGCCCCACCACCCTTCATTAAGCCAGTACAGTAGC
TTCTGAATCACCATGACTCCTGACCCCCCCCCCCCGCAGCACCCACGGTC
ATGGCAGCGCTCAGCGCCCTGGCCGCCGACCCCGCCCTGCCCAACAACCC
GCGCCTGCTGACGCGCACCTGCGCGGAGCTGCTGCGGCGGGAGGCGCGGT
GGGTGGCGGTGGCGGGGGGCATCCAGCAGGGCTCTGAGGAGGAGACGGAT
GCGCTGCTGCAGCGCGCGGTTGCTCAGGAGAGGTGCGTCAGTGCTCACCG
CAATGGATAGTGGTGTCAGGCCACGTTGGCTTGCTGCTGCCTCGGGAGAG
TGCAAGCCTCAGTCGCGCCTCTGCAGATGACTTGAAGCCAGCTGGGGCAC
CACTGTCAAGGAAGCCAACGTTATGAGTCCTGGCAGCTGTTGAATGTTGC
CTGCCAGTGCGTGCGAGGACCCGTATTGATCACCAGCAACGTGCGTGTGC
ATCGAGTGTGAACTCTTGAGTTTTGCATGAGCCATGCTGATCGGTGCCGC
ATTTCACGCCGCCCTGACTGACAGGACCAAGTGGAGCGCGGAAGTGATGA
CCAACATCCAGGGGGAGGAGCAGCGCGCTCCCCCGCCTTTCCCTGCAGCA
CCCGTCAGCACGTACGCGGTGGTGACTCTCCTGCTGCGCTGGGAGCACAC
TCCGCCCGGCGCGCACCGCTTCCTCCAGGCGCCGCTGTGGTTTGGGCGCA
GCCGCGTGAAGGACGCCGCGGAGGCGCGGCAGCTGCTGCTGTGGCTGCTG
AGCAATGCGCACGAGCTGCGCCTGCGCGACGTGGAGGTGCTGTGGTCGCC
CGCGGAGGCCGGCGACGTCATGACGGAGGCGGAGGCGTACCGCAAGTGGC
CGGAGCTGCGCCATGGCTGACTCGGAGACAGGCGGTGACATGGGCGGCAA
CGGCAGACTGTCGGACGGCGCGCGCTGTGGCACTGCTCAGTGACCGGCAG
CAGCGTCGGCGGCATTTTGCTTCGACCCGCTCACGCCGCAGCAGCAGCCT
CGGCAGATGCAGGGTGTATGTAGGTGCTGCACGAGCGCTGAGCGCGGCTG
CGGTTGCATGACAGTACGCTGCACGGGCTTGGCGGCGATGCTCCTGCATC
CACTTGATGGCATGCGCGTGGCCGTTGTCAGAGGTGTATGATACCCCCCC
ACCCCCCAGGTTTAGAGCAATAGATCTGAATGTGCTTGCAGTGTGCAGCA
GTCACGACAGGCTGGCGACTGTATTCTGATGGAGACCGCAAGGGATTGAA
GTAGGACACGTGGCGGCGGGTGGACAGGGATTGTGCAGAGCGAGATCAAA
CCAGCATCTTCGACTTTTGCACATGTGTGCTGGTGCTGACCCTTTCGGCC
CCATTTTTCATACATTTTCAGATTTCGCGCATTAGTGCAAGGGTTTCAAT
TCATTGGGCGCCCCCGCGAATACATTAGGTACAGGAGCTCCGTTTGTGCC
TGGGACTGCTAGAGACAGCAATGGGGAGCAGCATCTTATGTCATTTTATA
CACCTTCATCTGACACAATGCGACAGGTGGCGGCA

Coding sequence (CDS) from alignment at Contig_49:520311..527195+

>mRNA_10470 ID=mRNA_10470|Name=jgi.p|Trimin1|349794|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1548bp|location=Sequence derived from alignment at Contig_49:520311..527195+ (Tribonema minus UTEX_B_3156 )
ATGAGCTATAGCTGGGCTCAAGCGCGACTGATTCTCAGCGTCCTCCTGCT
GCTAGGGGCACACGTCTGGGCCTTCACGCCTGCAGCTCTGACGCCCTGCC
AGGTCGCCAGGAATCCTTTCTCAGGAATCGCGCCAAAGCGCGTATATGGG
CCCGGCTCTGCCGTTCGGCGCGCGGCAGCCAGCTACAGCAGCAGCCCCCA
TGTGTACTACTTCAACGACAGTGACGACGACGACTACGACGAGTTTGCCG
GCACGTACTGCGGCGAGACGTACAGCGGGCGCGACTGGATGCCGCCCCTC
GCGTGCGAGGACACGCGCAATGCCGACGCGCTGACGGGGCTGTCCATCGC
CGTCGGGCTGCCCTTGCTTGTGGTGACAGCGCCTACATTCCTCAATAGCG
CACACCTTATGGCCAACGACGCTCACCGCGAGCGCATGCGGCGGCTCAAG
GAGCAAGAGCAGCGCCCCGGCTTTGCCACGCTGCGCGTCGCTTTTTTCCA
CCCCGAGGCGGACGCCGCGGAGCCGAGCCGGGACGCCGCGAGCACCCCTA
CCACCTGCGTTTCTGACATTCCAGTTCGACGCCGCACGTCAAAGTTGCCT
GGCGGCACGTGGTGCAAGACCTGCAGCGACGCTCAGTACATCGATGGCCA
GCTGAGGGCGACCTGCGCCCGCAAGTATGGGCGGGAGAGCCGCATAAGCA
CTGTCCGAGCGCTGCCAGAGGATGAGGTCGTCAATGAAGACGGCCTGTTG
GTCAACACGACCAACTACGGGGGTTGCACCGAGGGAGGGGAGCTGCCCGG
CGGCACCTGGTGCAACTCGTGCATCGACGCCACTTACGTGAATGGCGAGC
TGAGCGCCCGCTGCAAGGGCCAGTACGGGAGACTCTGGGACAACGTGCGA
GCGCTCCCTTCGGACTATGTGGAGTATGATGGTCGCCGCCTCATCAACCG
CACCGACTATGCAACAGATGACCTGGAAGTGACGGCATCGGTGGGGGCAG
CGCATGCGGCACCCACGGTCATGGCAGCGCTCAGCGCCCTGGCCGCCGAC
CCCGCCCTGCCCAACAACCCGCGCCTGCTGACGCGCACCTGCGCGGAGCT
GCTGCGGCGGGAGGCGCGGTGGGTGGCGGTGGCGGGGGGCATCCAGCAGG
GCTCTGAGGAGGAGACGGATGCGCTGCTGCAGCGCGCGGTTGCTCAGGAG
AGGACCAAGTGGAGCGCGGAAGTGATGACCAACATCCAGGGGGAGGAGCA
GCGCGCTCCCCCGCCTTTCCCTGCAGCACCCGTCAGCACGTACGCGGTGG
TGACTCTCCTGCTGCGCTGGGAGCACACTCCGCCCGGCGCGCACCGCTTC
CTCCAGGCGCCGCTGTGGTTTGGGCGCAGCCGCGTGAAGGACGCCGCGGA
GGCGCGGCAGCTGCTGCTGTGGCTGCTGAGCAATGCGCACGAGCTGCGCC
TGCGCGACGTGGAGGTGCTGTGGTCGCCCGCGGAGGCCGGCGACGTCATG
ACGGAGGCGGAGGCGTACCGCAAGTGGCCGGAGCTGCGCCATGGCTGA