mRNA_12633 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|349769
Unique NamemRNA_12633
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|349769 vs. uniprot
Match: A0A835YRG6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRG6_9STRA)

HSP 1 Score: 809 bits (2089), Expect = 1.340e-287
Identity = 609/609 (100.00%), Postives = 609/609 (100.00%), Query Frame = 2 
Query:   38 MASSSKVSATVVGHHFIKSFYGEVLPRKPLELHRFYSEQSTFCHAEGNKQEQPVMGLENIKEKIRGLGLADATVDLDCGSVDIQASQNGSILLMVTGAITLRGQAPRQFAQTFLLATHRQMDGRHNFFVLNDVFRLLDTIPEVLEAALAKARPAPAVARPAAPRPPLLQAPCGAATPPAAGASPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTRAWDGAAASGGXXXXXXXXXXXXGDGGWGQGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKQASRRARSPSSAPVDETPQAKSWAAIVTKGAGDSPASPAXXXXXXXXXXXXXXXKPKHSPVLVPAEAPAAXXXPAAEAPPLAAAAAQXXXXXXXXXXXXXXXXXXRQTAGSPRAAAIATNSLFVKNIDPSTQSSEVATAFERFGTVTQVDLKPRPERCFAFVAFSSPDAVAEAIRVRDAGEEITLTERTLHYELRVDQPARSARGGHRGXXXXXXXXXXXXXXDRPAGDRPAALDKPAAAFSDKPAAADGGSSEAKPNGDGGEASRGEGRGGXXXXXGPRDYRGGRGASRQSPPHAQPQQQQAKPTSSA 1864
            MASSSKVSATVVGHHFIKSFYGEVLPRKPLELHRFYSEQSTFCHAEGNKQEQPVMGLENIKEKIRGLGLADATVDLDCGSVDIQASQNGSILLMVTGAITLRGQAPRQFAQTFLLATHRQMDGRHNFFVLNDVFRLLDTIPEVLEAALAKARPAPAVARPAAPRPPLLQAPCGAATPPAAGASPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTRAWDGAAASGGXXXXXXXXXXXXGDGGWGQGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKQASRRARSPSSAPVDETPQAKSWAAIVTKGAGDSPASPAXXXXXXXXXXXXXXXKPKHSPVLVPAEAPAAXXXPAAEAPPLAAAAAQXXXXXXXXXXXXXXXXXXRQTAGSPRAAAIATNSLFVKNIDPSTQSSEVATAFERFGTVTQVDLKPRPERCFAFVAFSSPDAVAEAIRVRDAGEEITLTERTLHYELRVDQPARSARGGHRGXXXXXXXXXXXXXXDRPAGDRPAALDKPAAAFSDKPAAADGGSSEAKPNGDGGEASRGEGRGGXXXXXGPRDYRGGRGASRQSPPHAQPQQQQAKPTSSA
Sbjct:    1 MASSSKVSATVVGHHFIKSFYGEVLPRKPLELHRFYSEQSTFCHAEGNKQEQPVMGLENIKEKIRGLGLADATVDLDCGSVDIQASQNGSILLMVTGAITLRGQAPRQFAQTFLLATHRQMDGRHNFFVLNDVFRLLDTIPEVLEAALAKARPAPAVARPAAPRPPLLQAPCGAATPPAAGASPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTRAWDGAAASGGXXXXXXXXXXXXGDGGWGQGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKQASRRARSPSSAPVDETPQAKSWAAIVTKGAGDSPASPAXXXXXXXXXXXXXXXKPKHSPVLVPAEAPAAXXXPAAEAPPLAAAAAQXXXXXXXXXXXXXXXXXXRQTAGSPRAAAIATNSLFVKNIDPSTQSSEVATAFERFGTVTQVDLKPRPERCFAFVAFSSPDAVAEAIRVRDAGEEITLTERTLHYELRVDQPARSARGGHRGXXXXXXXXXXXXXXDRPAGDRPAALDKPAAAFSDKPAAADGGSSEAKPNGDGGEASRGEGRGGXXXXXGPRDYRGGRGASRQSPPHAQPQQQQAKPTSSA 609
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BLAST of jgi.p|Trimin1|349769 vs. uniprot
Match: A0A835Z9L7_9STRA (NTF2 domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9L7_9STRA)

HSP 1 Score: 201 bits (511), Expect = 2.450e-55
Identity = 102/151 (67.55%), Postives = 120/151 (79.47%), Query Frame = 2 
Query:   38 MASSS---KVSATVVGHHFIKSFYGEVLPRKPLELHRFYSEQSTFCHAEGNKQEQPVMGLENIKEKIRGLGLADATVDLDCGSVDIQASQNGSILLMVTGAITLRGQAPRQFAQTFLLATHRQMDGRHNFFVLNDVFRLLDTIPEVLEAAL 481
            MASS+   + SA VVG HFIK +YG+VLP KP EL RFY E+STFCHA+G+ QE PV GLENIK KI  LGLADATVDLDCGSVD Q S +  I+LMVTG+I L+GQ  RQFAQTF LA   Q +GRHN+ V+ND+FRLLDTIP+VL+AA+
Sbjct:    1 MASSTVDTQPSAAVVGGHFIKQYYGQVLPNKPTELFRFYHEKSTFCHADGSSQEDPVTGLENIKAKILSLGLADATVDLDCGSVDAQPSVDDGIILMVTGSIKLQGQRLRQFAQTFFLALQLQKNGRHNYVVMNDIFRLLDTIPDVLKAAV 151
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BLAST of jgi.p|Trimin1|349769 vs. uniprot
Match: A0A6H5L110_9PHAE (NTF2 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L110_9PHAE)

HSP 1 Score: 190 bits (483), Expect = 1.650e-50
Identity = 91/142 (64.08%), Postives = 111/142 (78.17%), Query Frame = 2 
Query:   68 VVGHHFIKSFYGEVLPRKPLELHRFYSEQSTFCHAEGNKQEQPVMGLENIKEKIRGLGLADATVDLDCGSVDIQASQNGSILLMVTGAITLRGQAPRQFAQTFLLATHRQMDGRHNFFVLNDVFRLLDTIPEVLEAALAKAR 493
            VVG HF+K +YGEVL +KP+ELHRFY ++STFCHA G K+E+PV GLE+IK KI+ LGL  ATVDL CGSVD Q S+ G +LLMVTG+IT+    PRQF QTF LA   Q + RHN+FV ND+FR LD +PEV++AAL KAR
Sbjct:   12 VVGSHFVKQYYGEVLSKKPVELHRFYKDESTFCHASGTKEEEPVSGLEDIKAKIKHLGLGGATVDLGCGSVDAQPSEGGGVLLMVTGSITIANTDPRQFCQTFFLARQHQDNDRHNYFVRNDIFRFLDVLPEVVQAAL-KAR 152
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BLAST of jgi.p|Trimin1|349769 vs. uniprot
Match: D7FJI2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJI2_ECTSI)

HSP 1 Score: 190 bits (483), Expect = 1.010e-48
Identity = 91/142 (64.08%), Postives = 111/142 (78.17%), Query Frame = 2 
Query:   68 VVGHHFIKSFYGEVLPRKPLELHRFYSEQSTFCHAEGNKQEQPVMGLENIKEKIRGLGLADATVDLDCGSVDIQASQNGSILLMVTGAITLRGQAPRQFAQTFLLATHRQMDGRHNFFVLNDVFRLLDTIPEVLEAALAKAR 493
            VVG HF+K +YGEVL +KP+ELHRFY ++STFCHA G K+E+PV GLE+IK KI+ LGL  ATVDL CGSVD Q S+ G +LLMVTG+IT+    PRQF QTF LA   Q + RHN+FV ND+FR LD +PEV++AAL KAR
Sbjct:   12 VVGSHFVKQYYGEVLSKKPVELHRFYKDESTFCHASGTKEEEPVSGLEDIKAKIKHLGLGGATVDLGCGSVDAQPSEGGGVLLMVTGSITIANTDPRQFCQTFFLARQHQDNDRHNYFVRNDIFRFLDVLPEVVQAAL-KAR 152
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BLAST of jgi.p|Trimin1|349769 vs. uniprot
Match: A0A7S2RRZ8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RRZ8_9STRA)

HSP 1 Score: 114 bits (285), Expect = 2.180e-25
Identity = 62/146 (42.47%), Postives = 89/146 (60.96%), Query Frame = 2 
Query:   50 SKVSATVVGHHFIKSFYGEVLPRKPLELHRFYSEQSTFCHAEGNKQEQPVMGLENIKEKIRGLGLADATVDLDCGSVDIQASQNGSILLMVTGAITLRGQAPRQFAQTFLLATHRQMDGRH-NFFVLNDVFRLLDTIPEVLEAALA 484
            SKVSA  V   F+ ++Y E L  +PL +H FY E+S   + +G   + PV G++ IKE IR  G     +DL+ GSVD Q S++G +LL+VTG +T + Q PRQF QTF LA+    +G   ++++LND  R+LD +     AA A
Sbjct:   52 SKVSAAKVATQFVSTYY-ERLKNEPLRMHLFYQEESQVQYVDGANAQGPVGGMQKIKEVIRQRGSEHWVLDLESGSVDAQPSKDGGVLLLVTGILTTQNQPPRQFVQTFFLASQASTNGTSASYYILNDTLRILDPVHPPPAAAAA 196
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BLAST of jgi.p|Trimin1|349769 vs. uniprot
Match: A0A1V9YQR1_9STRA (Ras GTPase-activating protein-binding protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YQR1_9STRA)

HSP 1 Score: 114 bits (285), Expect = 4.010e-23
Identity = 63/136 (46.32%), Postives = 83/136 (61.03%), Query Frame = 2 
Query:   44 SSSKVSATVVGHHFIKSFYGEVLPRKPLELHRFYSEQSTFCHAEGNKQEQPVMGLENIKEKIRGLGLADATVDLDCGSVDIQASQNGSILLMVTGAITLRGQAPRQFAQTFLLATHRQMDGRHNFFVLNDVFRLLD 451
            ++S V    VG+ F+K +Y  +L   P  LHRFY + S F HA G++ E+P+ G E IKE I G       VDLD GS+D  ASQ+G +++MVTG I L+  AP  F QTF LA   Q +G   +FVLNDV R L+
Sbjct:    5 AASAVHPVTVGNTFVKQYYN-LLTEAPQNLHRFYKDISRFSHATGSQMEEPISGQEAIKEVILGKNYMGTRVDLDNGSIDCHASQDGGVIVMVTGIIKLKNAAPTHFVQTFFLAV--QPNG---YFVLNDVLRFLE 134
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BLAST of jgi.p|Trimin1|349769 vs. uniprot
Match: A0A024GD52_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GD52_9STRA)

HSP 1 Score: 115 bits (288), Expect = 1.020e-22
Identity = 68/143 (47.55%), Postives = 90/143 (62.94%), Query Frame = 2 
Query:   47 SSKVSATVVGHHFIKSFYGEVLPRKPLELHRFYSEQSTFCHAEGNKQEQPVMGLENIKEKIRGLGLADATVDLDCGSVDIQASQNGSILLMVTGAITLRGQA-PRQFAQTFLLATHRQMDGRHNFFVLNDVFRLLDTIPEVLE 472
            S  VS T VG+ F+K +Y  +L   P +LHRFY + ST+CH  G++ EQ ++G + I ++I   G     VDLD GS+D QAS +GSIL++VTG +TLR  A P+ F QTF LA   Q  G   +FVLNDV R L+  P  LE
Sbjct:   15 SEAVSPTAVGNAFVKQYY-HLLSETPEQLHRFYKDVSTWCHGNGSQMEQSILGQKAINDQIMIRGYIGTRVDLDRGSIDCQASLHGSILVLVTGVMTLRSSATPKPFVQTFYLAV--QPTG---YFVLNDVLRFLEA-PSPLE 150
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BLAST of jgi.p|Trimin1|349769 vs. uniprot
Match: F0W2Q5_9STRA (Serine/threonine protein kinase putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W2Q5_9STRA)

HSP 1 Score: 115 bits (287), Expect = 1.340e-22
Identity = 69/150 (46.00%), Postives = 93/150 (62.00%), Query Frame = 2 
Query:   56 VSATVVGHHFIKSFYGEVLPRKPLELHRFYSEQSTFCHAEGNKQEQPVMGLENIKEKIRGLGLADATVDLDCGSVDIQASQNGSILLMVTGAITLRGQA-PRQFAQTFLLATHRQMDGRHNFFVLNDVFRLLDTIPEVLEAALAKARPAP 502
            VS T VG+ F+K +Y  +L   P +LHRFY + ST+CH  G++ EQ ++G + I ++I   G     VDLD GS+D QAS +GSIL++VTG +TLR  A P+ F QTF LA   Q  G   +FVLNDV R L+  P   EA  + + P P
Sbjct:   18 VSPTAVGNAFVKQYY-HLLSETPEQLHRFYKDISTWCHGNGSQMEQSILGQKAINDQIMIRGYIGTRVDLDRGSIDCQASLHGSILVLVTGVMTLRSSAIPKPFVQTFYLAV--QPTG---YFVLNDVLRFLEA-PSPSEAGTSASIPIP 160
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BLAST of jgi.p|Trimin1|349769 vs. uniprot
Match: A0A3R7BPW0_9STRA (NTF2 domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7BPW0_9STRA)

HSP 1 Score: 103 bits (258), Expect = 3.760e-21
Identity = 64/159 (40.25%), Postives = 89/159 (55.97%), Query Frame = 2 
Query:   41 ASSSKVSATVVGHHFIKSFYGEVLPRKPLELHRFYSEQSTFCHAEGNKQEQPVMGLENIKEKIRGLGLADATVDLDCGSVDIQASQNGSILLMVTGAITLRGQAPRQFAQTFLLATHRQMDGRHNFFVLNDVFRLLDTIPEVLE-----AALAKARPAP 502
            A+++    T VG+ F+K +Y  +L   P +LHRFY E+STF H  G+  E+ V G   I   I     + A V LD GS+D Q SQ G ++++VTG ITL+  AP  F Q+F LA        + +FVLNDV R+L +IP   +     +   KA PAP
Sbjct:    5 ATAAVPHPTTVGNTFVKQYYS-LLTGSPEKLHRFYKEESTFSHGLGSHPEESVSGQTAINSTILKKHYSGAVVHLDHGSIDCQGSQQGGVVVLVTGVITLQRSAPSHFVQSFFLAVQE-----NGYFVLNDVLRIL-SIPSTKQQQSPASPTKKAAPAP 156
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BLAST of jgi.p|Trimin1|349769 vs. uniprot
Match: A0A1W0A8H8_9STRA (Ras GTPase-activating protein-binding protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A8H8_9STRA)

HSP 1 Score: 103 bits (257), Expect = 9.960e-20
Identity = 62/152 (40.79%), Postives = 85/152 (55.92%), Query Frame = 2 
Query:   47 SSKVSATVVGHHFIKSFYGEVLPRKPLELHRFYSEQSTFCHAEGNKQEQPVMGLENIKEKIRGLGLADATVDLDCGSVDIQASQNGSILLMVTGAITLRGQAPRQFAQTFLLATHRQMDGRHNFFVLNDVFRLLDTIPEVLEAALAKARPAP 502
            S  V    VG+ F+K +Y  +L   P +LHRFY + S F H  G++ E+P+ G + I + I       A VDLD GS+D  ASQNG +++MVTG I L+      F QTF LA   Q +G   +FVLNDV R L+    +  + + K  PAP
Sbjct:    2 SVNVHPVTVGNTFVKQYYN-LLTESPEKLHRFYKDISRFSHVTGSQMEEPISGQKEINDAIMAKNYNGARVDLDNGSIDCHASQNGGVIVMVTGIIKLKHGNATHFVQTFFLAP--QPNG---YFVLNDVLRFLEVTGAL--SPVTKVAPAP 145
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BLAST of jgi.p|Trimin1|349769 vs. uniprot
Match: A0A836CBW6_9STRA (CRC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBW6_9STRA)

HSP 1 Score: 1931 bits (5002), Expect = 0.000e+0
Identity = 1262/1262 (100.00%), Postives = 1262/1262 (100.00%), Query Frame = 1 
Query:    1 MGFASPPGVHAPSARSAAQGGGAQPGPLKKQNSLVAELALTQHRQQQRWQLRSSNGGAMHSAMPAPAQPRVRNEDVMAAPGGGAMGGPNREAQTPSRHSYDSPTGSPRRGPARGVAEDGEIPXXXXXXXXXXXXXWGLMDMKSPKNVTAELTLLQPLAAQGXXXXXXXKNGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLEFADHQRETPPSTPIKSNGRGGGAFNPFNTVVGDAMSYSHXXXXXXXXXXXXXXXXXXXXXTPPGPHPGMLSPGMCSPSLFFAMTPNANGSAMSPMNTSLLLGGDDSVRTPVAARLAQRGXXXXXSDGVLEGGDPGYRSGSSXXXXXXXXXXXXXXXXXXQSSSGGDXXXXXXXXXXXXXXXXXXXXSPICNEAALGPEGSIGTTRRTRSSMRKGAAAAAAPATPKALKSNGHSASTPDANRINTLVHALVAETPGTSDTSSGSRGGPPQTPEGERYHLLSDRGSGGGGGMSPGFISPMRLDHLGSPVPAVPAGSPVKAPQQQQELSAGEEQAWDETAAAATXXXXDAHETAAAAAEIAAIRAEAGVRGAGMGMGMVGNPGWRVTDKEAEVVLGGPFVPQMLAIINSRIWGADEPDPTELSECLTAGTVREATGLSSAHRKTTIYFGRGVTGGTIALSGAVTHGQRCRSEALLSSFTVEGGVARTASDAASHPYATSTAEHFDERPALPARSSARHSDGGSGSKRGRGRGLLPGLLEAPGSDAKKSRATPPSSAPRSILKQELASPSQLARPPRMSLCSPPPPTPKKRPRVSISSAEPSVQQFGKEPPIAVEQLQPPXXXXXXXXXXXXXXXSCNCKKSRCLKLYCECFQRRERCGPACNCQNCHNTIETEAERLAAIAACIERNPAAFKTKLQVTALPAGAALGKLQVPTALSKGQGDSPPLQCKRSACLKRYCECYQGGAFCTNRCKCDGCKNRSSVEQATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSECGGGTAFRXXXXXXXXXXXXXXXXXLRPRLYIATTXXXXXXXXXXXXXXXVAHIQQPPFSNLNYHPAAPHALLTAEDEAAAAEAAAGSLGAYFPGTPLVGIGTSNDARGYADESPLPTFIGDLGGPIEGTSXXXXXXXXGVLKENSSSVAERNRSRSASPTELKLTLLPLRQRRWDAACTPVQRDRYCRPFGRQPRLLMYRGSMVNVLSFLNNADLAAAARVAKSWSNFAANAALWEDAPTDAAPPL 3786
            MGFASPPGVHAPSARSAAQGGGAQPGPLKKQNSLVAELALTQHRQQQRWQLRSSNGGAMHSAMPAPAQPRVRNEDVMAAPGGGAMGGPNREAQTPSRHSYDSPTGSPRRGPARGVAEDGEIPXXXXXXXXXXXXXWGLMDMKSPKNVTAELTLLQPLAAQGXXXXXXXKNGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLEFADHQRETPPSTPIKSNGRGGGAFNPFNTVVGDAMSYSHXXXXXXXXXXXXXXXXXXXXXTPPGPHPGMLSPGMCSPSLFFAMTPNANGSAMSPMNTSLLLGGDDSVRTPVAARLAQRGXXXXXSDGVLEGGDPGYRSGSSXXXXXXXXXXXXXXXXXXQSSSGGDXXXXXXXXXXXXXXXXXXXXSPICNEAALGPEGSIGTTRRTRSSMRKGAAAAAAPATPKALKSNGHSASTPDANRINTLVHALVAETPGTSDTSSGSRGGPPQTPEGERYHLLSDRGSGGGGGMSPGFISPMRLDHLGSPVPAVPAGSPVKAPQQQQELSAGEEQAWDETAAAATXXXXDAHETAAAAAEIAAIRAEAGVRGAGMGMGMVGNPGWRVTDKEAEVVLGGPFVPQMLAIINSRIWGADEPDPTELSECLTAGTVREATGLSSAHRKTTIYFGRGVTGGTIALSGAVTHGQRCRSEALLSSFTVEGGVARTASDAASHPYATSTAEHFDERPALPARSSARHSDGGSGSKRGRGRGLLPGLLEAPGSDAKKSRATPPSSAPRSILKQELASPSQLARPPRMSLCSPPPPTPKKRPRVSISSAEPSVQQFGKEPPIAVEQLQPPXXXXXXXXXXXXXXXSCNCKKSRCLKLYCECFQRRERCGPACNCQNCHNTIETEAERLAAIAACIERNPAAFKTKLQVTALPAGAALGKLQVPTALSKGQGDSPPLQCKRSACLKRYCECYQGGAFCTNRCKCDGCKNRSSVEQATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSECGGGTAFRXXXXXXXXXXXXXXXXXLRPRLYIATTXXXXXXXXXXXXXXXVAHIQQPPFSNLNYHPAAPHALLTAEDEAAAAEAAAGSLGAYFPGTPLVGIGTSNDARGYADESPLPTFIGDLGGPIEGTSXXXXXXXXGVLKENSSSVAERNRSRSASPTELKLTLLPLRQRRWDAACTPVQRDRYCRPFGRQPRLLMYRGSMVNVLSFLNNADLAAAARVAKSWSNFAANAALWEDAPTDAAPPL
Sbjct:    1 MGFASPPGVHAPSARSAAQGGGAQPGPLKKQNSLVAELALTQHRQQQRWQLRSSNGGAMHSAMPAPAQPRVRNEDVMAAPGGGAMGGPNREAQTPSRHSYDSPTGSPRRGPARGVAEDGEIPXXXXXXXXXXXXXWGLMDMKSPKNVTAELTLLQPLAAQGXXXXXXXKNGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLEFADHQRETPPSTPIKSNGRGGGAFNPFNTVVGDAMSYSHXXXXXXXXXXXXXXXXXXXXXTPPGPHPGMLSPGMCSPSLFFAMTPNANGSAMSPMNTSLLLGGDDSVRTPVAARLAQRGXXXXXSDGVLEGGDPGYRSGSSXXXXXXXXXXXXXXXXXXQSSSGGDXXXXXXXXXXXXXXXXXXXXSPICNEAALGPEGSIGTTRRTRSSMRKGAAAAAAPATPKALKSNGHSASTPDANRINTLVHALVAETPGTSDTSSGSRGGPPQTPEGERYHLLSDRGSGGGGGMSPGFISPMRLDHLGSPVPAVPAGSPVKAPQQQQELSAGEEQAWDETAAAATXXXXDAHETAAAAAEIAAIRAEAGVRGAGMGMGMVGNPGWRVTDKEAEVVLGGPFVPQMLAIINSRIWGADEPDPTELSECLTAGTVREATGLSSAHRKTTIYFGRGVTGGTIALSGAVTHGQRCRSEALLSSFTVEGGVARTASDAASHPYATSTAEHFDERPALPARSSARHSDGGSGSKRGRGRGLLPGLLEAPGSDAKKSRATPPSSAPRSILKQELASPSQLARPPRMSLCSPPPPTPKKRPRVSISSAEPSVQQFGKEPPIAVEQLQPPXXXXXXXXXXXXXXXSCNCKKSRCLKLYCECFQRRERCGPACNCQNCHNTIETEAERLAAIAACIERNPAAFKTKLQVTALPAGAALGKLQVPTALSKGQGDSPPLQCKRSACLKRYCECYQGGAFCTNRCKCDGCKNRSSVEQATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSECGGGTAFRXXXXXXXXXXXXXXXXXLRPRLYIATTXXXXXXXXXXXXXXXVAHIQQPPFSNLNYHPAAPHALLTAEDEAAAAEAAAGSLGAYFPGTPLVGIGTSNDARGYADESPLPTFIGDLGGPIEGTSXXXXXXXXGVLKENSSSVAERNRSRSASPTELKLTLLPLRQRRWDAACTPVQRDRYCRPFGRQPRLLMYRGSMVNVLSFLNNADLAAAARVAKSWSNFAANAALWEDAPTDAAPPL 1262
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BLAST of jgi.p|Trimin1|349769 vs. uniprot
Match: A0A7S0RP90_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0RP90_9CHLO)

HSP 1 Score: 126 bits (316), Expect = 3.520e-28
Identity = 65/128 (50.78%), Postives = 80/128 (62.50%), Query Frame = 1 
Query: 2506 CNCKKSRCLKLYCECFQRRERCGPACNCQNCHNTIETEAERLAAIAACIERNPAAFKTKLQVTALPAGAALGKLQVPTALSKGQGDSPPLQCKRSACLKRYCECYQGGAFCTNRCKCDGCKNRSSVEQ 2889
            CNCK SRCLKLYCECF     C   CNC NC+N  E E  R++A+ A +ERNP AF+ K+Q       AA  +L  P A + G+  S    CK+SACLK+YCEC+Q G FC++ CKC  CKN    EQ
Sbjct:   17 CNCKNSRCLKLYCECFASGRYCD-GCNCSNCYNNRENEHVRMSAVEAILERNPNAFRPKIQAQEEVVAAA-PRLAAPPADAGGK-HSKGCNCKKSACLKKYCECFQAGVFCSDSCKCVECKNYEGSEQ 141
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BLAST of jgi.p|Trimin1|349769 vs. uniprot
Match: A0A7S3YLM9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YLM9_HETAK)

HSP 1 Score: 115 bits (289), Expect = 9.990e-26
Identity = 60/122 (49.18%), Postives = 72/122 (59.02%), Query Frame = 1 
Query: 2506 CNCKKSRCLKLYCECFQRRERCGPACNCQNCHNTIETEAERLAAIAACIERNPAAFKTKLQVTALPAGAALGKLQVPTALSKGQGDSPPLQCKRSACLKRYCECYQGGAFCTNRCKCDGCKN 2871
            CNCKKS+CLKLYCECF   + CG ACNC +C N   TEA+R  AI A +ERNP AF +K+   AL                  Q  S    CK+S+CLK+YCEC+Q G  C+ RCKC  C N
Sbjct:   46 CNCKKSKCLKLYCECFAAGKYCG-ACNCVDCQNAPATEAQRQDAIKAILERNPKAFSSKINREAL----------------HKQHHSTGCNCKKSSCLKKYCECFQAGVPCSARCKCAACLN 150
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BLAST of jgi.p|Trimin1|349769 vs. uniprot
Match: A0A8C7XQT5_9TELE (Lin-54 DREAM MuvB core complex component n=1 Tax=Oryzias sinensis TaxID=183150 RepID=A0A8C7XQT5_9TELE)

HSP 1 Score: 117 bits (293), Expect = 1.330e-25
Identity = 64/134 (47.76%), Postives = 77/134 (57.46%), Query Frame = 1 
Query: 2506 CNCKKSRCLKLYCECFQRRERCGPACNCQNCHNTIETEAERLAAIAACIERNPAAFKTKLQVTALPAGAALGKLQVPTALSKGQGD---SPPLQCKRSACLKRYCECYQGGAFCTNRCKCDGCKN-RSSVEQAT 2895
            CNC KS+CLKLYC+CF   E C   CNC NC N +E E ERL AI  C++RNP AFK K+           GK +      +G+ D   S    CKRS CLK YCECY+    C++ CKC GCKN   S E+ T
Sbjct:   21 CNCTKSQCLKLYCDCFANGEFCN-MCNCNNCFNNLEHETERLKAIKTCLDRNPEAFKPKI-----------GKGK------EGESDRRHSKGCNCKRSGCLKNYCECYEAKIMCSSICKCIGCKNFEESPERKT 136
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BLAST of jgi.p|Trimin1|349769 vs. uniprot
Match: A0A7S3AJR0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AJR0_9EUKA)

HSP 1 Score: 115 bits (287), Expect = 1.960e-25
Identity = 59/127 (46.46%), Postives = 76/127 (59.84%), Query Frame = 1 
Query: 2506 CNCKKSRCLKLYCECFQRRERCGPACNCQNCHNTIETEAERLAAIAACIERNPAAFKTKLQVTALPAGAALGKLQVPTALSKGQGDSPPLQCKRSACLKRYCECYQGGAFCTNRCKCDGCKNRSSVE 2886
            CNCK SRCLKLYCECF   + C  ACNCQ+CHN  E + +R  AI + +ERNP AF+ K+      AG  L +             +    C++S+CLK+YCEC+QGG  CT  CKC GCKN   ++
Sbjct:    7 CNCKNSRCLKLYCECFASGQYCL-ACNCQSCHNNPENDDKRKRAIKSTLERNPQAFRPKIN----HAGDTLRR------------HTRGCHCRKSSCLKKYCECFQGGIKCTAMCKCAGCKNYEDLD 116
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BLAST of jgi.p|Trimin1|349769 vs. uniprot
Match: A7SAT6_NEMVE (Predicted protein (Fragment) n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SAT6_NEMVE)

HSP 1 Score: 115 bits (289), Expect = 2.790e-25
Identity = 65/134 (48.51%), Postives = 77/134 (57.46%), Query Frame = 1 
Query: 2506 CNCKKSRCLKLYCECFQRRERCGPACNCQNCHNTIETEAERLAAIAACIERNPAAFKTKLQVTALPAGAALGKLQVPTALSKGQGD---SPPLQCKRSACLKRYCECYQGGAFCTNRCKCDGCKN-RSSVEQAT 2895
            CNC KS+CLKLYC+CF + E C   CNC NC N IE E ER  AI AC+ERNP AF  K+           GK +V      G+ +   +    CKRS CLK YCECY+    CT+ CKC GCKN   S E+ T
Sbjct:    7 CNCTKSQCLKLYCDCFAQGEFCSN-CNCVNCSNNIEHERERSKAIKACLERNPHAFHPKI-----------GKGKV------GESERRHNKGCHCKRSGCLKNYCECYEAKILCTSLCKCTGCKNFEESPERKT 122
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BLAST of jgi.p|Trimin1|349769 vs. uniprot
Match: UPI0018851BD6 (LOW QUALITY PROTEIN: protein lin-54 homolog n=1 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI0018851BD6)

HSP 1 Score: 116 bits (290), Expect = 3.420e-25
Identity = 58/126 (46.03%), Postives = 74/126 (58.73%), Query Frame = 1 
Query: 2506 CNCKKSRCLKLYCECFQRRERCGPACNCQNCHNTIETEAERLAAIAACIERNPAAFKTKLQVTALPAGAALGKLQVPTALSKGQGDSPPLQCKRSACLKRYCECYQGGAFCTNRCKCDGCKNRSSV 2883
            CNC KS+CLKLYC+CF   E C   CNC NC+N+++ E ER  AI +C++RNP AFK K+           GK    T     +       CK+S CLK YCECY+   FC+++CKC GCKN  S 
Sbjct:   30 CNCTKSQCLKLYCDCFASGEFCNN-CNCTNCYNSLDHEEERQRAIRSCLDRNPYAFKPKI-----------GKSDNET-----RKHQKGCNCKKSGCLKNYCECYEAKIFCSSQCKCMGCKNHESA 138
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BLAST of jgi.p|Trimin1|349769 vs. uniprot
Match: A0A1R2CI72_9CILI (CRC domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CI72_9CILI)

HSP 1 Score: 117 bits (292), Expect = 3.480e-25
Identity = 58/122 (47.54%), Postives = 75/122 (61.48%), Query Frame = 1 
Query: 2506 CNCKKSRCLKLYCECFQRRERCGPACNCQNCHNTIETEAERLAAIAACIERNPAAFKTKLQVTALPAGAALGKLQVPTALSKGQGDSPPLQCKRSACLKRYCECYQGGAFCTNRCKCDGCKN 2871
            C C KS+CLK+YCECF R   C   CNC NCHNT+E E  R  A+++ +ERNP AFK+K+          +G+ +  +  SKG        C +SACLK YCEC+Q  A CT+ C+C GCKN
Sbjct:  146 CTCPKSKCLKMYCECFSRGNYCD-GCNCVNCHNTLEYENIRREAVSSLLERNPNAFKSKISTV-------VGEGEELSVHSKG------CHCTKSACLKNYCECFQNSAVCTDMCQCTGCKN 253
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BLAST of jgi.p|Trimin1|349769 vs. uniprot
Match: A0A2L2YNU1_PARTP (Protein lin-54-like protein (Fragment) n=1 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=A0A2L2YNU1_PARTP)

HSP 1 Score: 115 bits (289), Expect = 3.800e-25
Identity = 65/138 (47.10%), Postives = 77/138 (55.80%), Query Frame = 1 
Query: 2506 CNCKKSRCLKLYCECFQRRERCGPACNCQNCHNTIETEAERLAAIAACIERNPAAFKTKLQVTALPAGAALGKLQVPTALSKGQGDSPP-------LQCKRSACLKRYCECYQGGAFCTNRCKCDGCKN-RSSVEQAT 2895
            CNC KS+CLKLYC+CF   E C  +CNC NC+N +  E ER  AI AC++RNP AF  K+           GK +V      G G+S           CKRS CLK YCECY+    CTN CKC GCKN   S E+ T
Sbjct:   12 CNCTKSQCLKLYCDCFANGEFCN-SCNCTNCYNNLSHEEERQKAIKACLDRNPYAFHPKI-----------GKSRV------GGGNSDQERRHTKGCNCKRSYCLKNYCECYEAKILCTNLCKCVGCKNFEDSSERKT 131
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BLAST of jgi.p|Trimin1|349769 vs. uniprot
Match: A0A7S3CVV7_9EUKA (Hypothetical protein n=2 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3CVV7_9EUKA)

HSP 1 Score: 122 bits (307), Expect = 4.320e-25
Identity = 60/130 (46.15%), Postives = 73/130 (56.15%), Query Frame = 1 
Query: 2506 CNCKKSRCLKLYCECFQRRERCGPACNCQNCHNTIETEAERLAAIAACIERNPAAFKTKLQVTALPAGAALGKLQVPTALSKGQGDSPPLQCKRSACLKRYCECYQGGAFCTNRCKCDGCKNRSSVEQAT 2895
            CNCK SRCLKLYCECF     C   CNCQNCHN      ER+A I   +ER+P AFK K++   +  GA  G   V              +CK+S C K+YCEC+Q G  CT+RCKC+ C N   V + T
Sbjct:  132 CNCKNSRCLKLYCECFAAGRMCTVECNCQNCHNCDSHNGERMAVINTILERDPNAFKPKVKRGVVQGGAGEGGGAVVPGGDDQHVHIKGCRCKKSGCTKKYCECFQAGVKCTDRCKCEKCHNPHGVREKT 261
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349769 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YRG6_9STRA1.340e-287100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z9L7_9STRA2.450e-5567.55NTF2 domain-containing protein (Fragment) n=1 Tax=... [more]
A0A6H5L110_9PHAE1.650e-5064.08NTF2 domain-containing protein (Fragment) n=1 Tax=... [more]
D7FJI2_ECTSI1.010e-4864.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2RRZ8_9STRA2.180e-2542.47Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A1V9YQR1_9STRA4.010e-2346.32Ras GTPase-activating protein-binding protein n=1 ... [more]
A0A024GD52_9STRA1.020e-2247.55Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
F0W2Q5_9STRA1.340e-2246.00Serine/threonine protein kinase putative n=1 Tax=A... [more]
A0A3R7BPW0_9STRA3.760e-2140.25NTF2 domain-containing protein n=2 Tax=Aphanomyces... [more]
A0A1W0A8H8_9STRA9.960e-2040.79Ras GTPase-activating protein-binding protein (Fra... [more]

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BLAST of jgi.p|Trimin1|349769 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CBW6_9STRA0.000e+0100.00CRC domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S0RP90_9CHLO3.520e-2850.78Hypothetical protein (Fragment) n=1 Tax=Chlamydomo... [more]
A0A7S3YLM9_HETAK9.990e-2649.18Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A8C7XQT5_9TELE1.330e-2547.76Lin-54 DREAM MuvB core complex component n=1 Tax=O... [more]
A0A7S3AJR0_9EUKA1.960e-2546.46Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
A7SAT6_NEMVE2.790e-2548.51Predicted protein (Fragment) n=1 Tax=Nematostella ... [more]
UPI0018851BD63.420e-2546.03LOW QUALITY PROTEIN: protein lin-54 homolog n=1 Ta... [more]
A0A1R2CI72_9CILI3.480e-2547.54CRC domain-containing protein n=1 Tax=Stentor coer... [more]
A0A2L2YNU1_PARTP3.800e-2547.10Protein lin-54-like protein (Fragment) n=1 Tax=Par... [more]
A0A7S3CVV7_9EUKA4.320e-2546.15Hypothetical protein n=2 Tax=Palpitomonas bilix Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_48contigContig_48:866922..880360 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|349769|estExt_Genemark1.C_Ctg_480084
BRITEko00000,ko00001,ko00002,ko01000,ko01006,ko03019,ko04131,ko04147
KEGG ModuleM00430
KEGG Pathwayko03013,ko03015,ko04139,map03013,map03015,map04139
KEGG koko:K14050,ko:K14328,ko:K17265,ko:K19718
EC2.5.1.60,3.6.4.12,3.6.4.13
GOsGO:0000003,GO:0000375,GO:0000377,GO:0000398,GO:0000932,GO:0001654,GO:0001736,GO:0001738,GO:0001745,GO:0001751,GO:0001752,GO:0001754,GO:0002009,GO:0002064,GO:0002065,GO:0002066,GO:0003002,GO:0003006,GO:0003674,GO:0003676,GO:0003678,GO:0003723,GO:0003724,GO:0003729,GO:0003824,GO:0004003,GO:0004004,GO:0004386,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006139,GO:0006355,GO:0006396,GO:0006397,GO:0006464,GO:0006508,GO:0006725,GO:0006807,GO:0006914,GO:0006996,GO:0007154,GO:0007163,GO:0007164,GO:0007165,GO:0007253,GO:0007264,GO:0007265,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007389,GO:0007399,GO:0007423,GO:0008026,GO:0008069,GO:0008094,GO:0008104,GO:0008150,GO:0008152,GO:0008186,GO:0008380,GO:0009056,GO:0009653,GO:0009798,GO:0009887,GO:0009888,GO:0009889,GO:0009893,GO:0009950,GO:0009953,GO:0009966,GO:0009968,GO:0009987,GO:0010467,GO:0010468,GO:0010494,GO:0010556,GO:0010604,GO:0010628,GO:0010646,GO:0010648,GO:0016043,GO:0016070,GO:0016071,GO:0016236,GO:0016318,GO:0016333,GO:0016334,GO:0016462,GO:0016579,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0019538,GO:0019953,GO:0022008,GO:0022412,GO:0022414,GO:0022607,GO:0022613,GO:0022618,GO:0023051,GO:0023052,GO:0023057,GO:0030111,GO:0030154,GO:0030159,GO:0030178,GO:0030182,GO:0030707,GO:0030855,GO:0031323,GO:0031326,GO:0032088,GO:0032386,GO:0032392,GO:0032501,GO:0032502,GO:0032504,GO:0032508,GO:0032879,GO:0032947,GO:0032991,GO:0033036,GO:0034063,GO:0034517,GO:0034622,GO:0034641,GO:0035556,GO:0035770,GO:0035973,GO:0036211,GO:0036464,GO:0040008,GO:0042067,GO:0042623,GO:0042706,GO:0042994,GO:0043021,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043412,GO:0043433,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0044703,GO:0044877,GO:0045165,GO:0045185,GO:0045570,GO:0045571,GO:0045926,GO:0046483,GO:0046530,GO:0046552,GO:0046620,GO:0046621,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048592,GO:0048609,GO:0048638,GO:0048640,GO:0048663,GO:0048699,GO:0048729,GO:0048731,GO:0048749,GO:0048856,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051049,GO:0051090,GO:0051093,GO:0051171,GO:0051179,GO:0051220,GO:0051235,GO:0051239,GO:0051241,GO:0051252,GO:0051276,GO:0051704,GO:0051716,GO:0060255,GO:0060341,GO:0060429,GO:0060627,GO:0060628,GO:0060828,GO:0061912,GO:0061919,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070035,GO:0070646,GO:0070647,GO:0070925,GO:0071103,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090090,GO:0090304,GO:0090596,GO:0097159,GO:0140097,GO:0140098,GO:1901360,GO:1901363,GO:1901564,GO:1903506,GO:1905538,GO:1990861,GO:1990904,GO:2000026,GO:2000112,GO:2000156,GO:2001141
Preferred nameG3BP2
Descriptionras GTPase-activating protein-binding protein
COG categoryO
Max annot lvl2759|Eukaryota
EggNOG OGsKOG0116@1|root,KOG0116@2759|Eukaryota
Evalue3.98e-50
Seed ortholog2880.D7FJI2
Hectar predicted targeting categoryother localisation
TranscriptId350091
TrackFilteredModels1
ProteinId349769
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349769gene_12633Tribonema minus UTEX_B_3156 geneContig_48 866922..880360 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349769Trimin1|349769|estExt_Genemark1.C_Ctg_480084Tribonema minus UTEX_B_3156 polypeptideContig_48 867412..880112 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_12633_1exon_12633_1Tribonema minus UTEX_B_3156 exonContig_48 866922..866948 +
exon_12633_2exon_12633_2Tribonema minus UTEX_B_3156 exonContig_48 867402..867528 +
exon_12633_3exon_12633_3Tribonema minus UTEX_B_3156 exonContig_48 868170..868317 +
exon_12633_4exon_12633_4Tribonema minus UTEX_B_3156 exonContig_48 872080..872249 +
exon_12633_5exon_12633_5Tribonema minus UTEX_B_3156 exonContig_48 872763..872800 +
exon_12633_6exon_12633_6Tribonema minus UTEX_B_3156 exonContig_48 872853..872886 +
exon_12633_7exon_12633_7Tribonema minus UTEX_B_3156 exonContig_48 873035..873068 +
exon_12633_8exon_12633_8Tribonema minus UTEX_B_3156 exonContig_48 873741..874135 +
exon_12633_9exon_12633_9Tribonema minus UTEX_B_3156 exonContig_48 874738..875022 +
exon_12633_10exon_12633_10Tribonema minus UTEX_B_3156 exonContig_48 875553..875675 +
exon_12633_11exon_12633_11Tribonema minus UTEX_B_3156 exonContig_48 876364..876462 +
exon_12633_12exon_12633_12Tribonema minus UTEX_B_3156 exonContig_48 877049..877137 +
exon_12633_13exon_12633_13Tribonema minus UTEX_B_3156 exonContig_48 878398..878606 +
exon_12633_14exon_12633_14Tribonema minus UTEX_B_3156 exonContig_48 880024..880360 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_12633UTR5_12633Tribonema minus UTEX_B_3156 five_prime_UTRContig_48 866922..866948 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_12633CDS_12633Tribonema minus UTEX_B_3156 CDSContig_48 867412..867528 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_12633UTR3_12633Tribonema minus UTEX_B_3156 three_prime_UTRContig_48 880113..880360 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_12633 ID=mRNA_12633|Name=jgi.p|Trimin1|349769|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2115bp|location=Sequence derived from alignment at Contig_48:866922..880360+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GCCACACAGGTCTGCCATCCTTTCCAGGCAGTGAGACATGGCATCGTCCT
CCAAGGTCTCTGCAACAGTAGTCGGTCACCACTTTATAAAGTCTTTTTAC
GGAGAGGTCCTGCCGCGCAAGCCTCTCGAGCTCCACCGCTTCTACTCTGA
GCAGAGTACCTTTTGCCATGCGGAGGGGAACAAGCAGGAGCAGCCTGTGA
TGGGGTTGGAGAACATCAAGGAGAAGATCAGGGGGCTGGGGCTTGCGGAT
GCCACCGTGGATCTGGACTGCGGATCTGTGGACATACAGGCGTCACAGAA
CGGCAGCATCCTCCTGATGGTGACGGGCGCAATCACGCTGCGCGGGCAGG
CGCCGCGCCAGTTTGCGCAGACGTTCCTGCTGGCGACGCACCGCCAGATG
GACGGCCGCCACAACTTCTTTGTCCTCAACGACGTCTTCCGCCTCCTGGA
CACCATCCCGGAGGTGCTCGAGGCGGCGTTGGCGAAGGCCCGTCCTGCGC
CGGCAGTTGCGCGCCCCGCGGCGCCGCGACCCCCCCTGCTGCAGGCGCCC
TGTGGCGCCGCCACCCCCCCTGCTGCAGGCGCCTCCCCGCCACCCCCCGC
CCCCCCCGCGCGCGCCCGCTCCCCCTCCCCCGCACGCCCCAAAACCCCCC
CTCCGCAGCCCAAGGCCCCCCCAGCCCCCGCGCCAGTCCCCCAACCGTCG
TCCCCCACGCCAAACCCTAGCACCAGGGCTTGGGACGGGGCCGCAGCCAG
CGGCGGCTGGGAATCAGGGGGGGCGTCGGGCGGGTGGGATTCGGGGGACG
GCGGTTGGGGGCAGGGTGCTGCTGCGGCTGCTCCCGCGGCTGCGCCGGCG
CCGGCAGCGCCTGCGGCAGCAGCGTCGCCGCCGCCGCCGGCAGCAGCGCC
TGCGCCGGCGGCAGCAGTGGCGGCAGCACCGGCGAAGCAGGCGTCGCGGC
GCGCGCGTTCCCCTTCCTCTGCGCCTGTGGACGAAACCCCCCAGGCCAAG
TCCTGGGCGGCGATTGTCACAAAGGGCGCTGGTGACTCTCCCGCATCCCC
CGCCCCCGCGGCCACCGCCCCCCCCGCCGCCGCCACCCCCACCGTCGCAA
AGCCAAAGCACAGCCCGGTGCTCGTGCCTGCAGAGGCGCCTGCTGCTGCG
CCGGCTCCTGCTGCGGAAGCTCCGCCGCTGGCGGCAGCGGCTGCGCAGCA
ACCCGCAGCGCCTGCCGCCGCCGCCGCTGCTGCTGCCATGCAGCAGCCTA
TCCGACAGACTGCGGGCAGCCCAAGAGCCGCCGCGATCGCGACCAACAGC
CTCTTTGTCAAGAACATCGACCCCTCTACGCAGAGCTCTGAAGTCGCGAC
GGCGTTTGAGAGGTTCGGCACCGTCACACAGGTGGACTTGAAACCTCGCC
CGGAGCGCTGTTTCGCGTTTGTGGCCTTCTCATCTCCGGACGCTGTTGCC
GAGGCCATCAGGGTCCGCGACGCCGGCGAGGAGATCACATTGACTGAGCG
AACGCTGCACTACGAGCTGCGGGTCGACCAGCCTGCGAGGAGCGCGCGGG
GGGGGCACCGTGGCGACAGGCGGTATGGACGCGGTTTCGGCCGTGGCCGC
GGCCGCGACCGGCCAGCCGGCGACAGGCCAGCAGCGCTCGACAAACCTGC
GGCGGCTTTCAGCGATAAGCCCGCAGCAGCGGATGGTGGCTCCTCTGAGG
CCAAGCCAAATGGCGATGGAGGGGAGGCTTCGCGGGGAGAGGGGAGGGGG
GGGCGCGGACGCGGCAGGGGCCCCAGAGATTACAGGGGCGGCCGCGGCGC
CTCCCGACAGAGCCCACCGCACGCGCAGCCGCAGCAGCAGCAGGCAAAGC
CGACGTCATCCGCTTAGCGGCGTGTGTGCGTGGGTGGAGGCGAGCGCCGC
CACACAAACTTCAACTTGAGGTTGACGCGGCGCGCGGCTGCCGCGCACGG
AAACCTGGGTTTGCGCGTGCGCGCCGCGCACTTTGCAGAAAAGAAACAAG
AAACGTCCTTAAAAAACAACAATCACACAGAAATTGGCAGCTGCTGCGGG
TGGGAAGGCACGGGCAGCTGCCCCCTGCATCAAGTCCGGGGCTCTCTTGA
GAGCACTGGCAAGAG
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protein sequence of jgi.p|Trimin1|349769

>Trimin1|349769|estExt_Genemark1.C_Ctg_480084 ID=Trimin1|349769|estExt_Genemark1.C_Ctg_480084|Name=jgi.p|Trimin1|349769|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=610bp
MASSSKVSATVVGHHFIKSFYGEVLPRKPLELHRFYSEQSTFCHAEGNKQ
EQPVMGLENIKEKIRGLGLADATVDLDCGSVDIQASQNGSILLMVTGAIT
LRGQAPRQFAQTFLLATHRQMDGRHNFFVLNDVFRLLDTIPEVLEAALAK
ARPAPAVARPAAPRPPLLQAPCGAATPPAAGASPPPPAPPARARSPSPAR
PKTPPPQPKAPPAPAPVPQPSSPTPNPSTRAWDGAAASGGWESGGASGGW
DSGDGGWGQGAAAAAPAAAPAPAAPAAAASPPPPAAAPAPAAAVAAAPAK
QASRRARSPSSAPVDETPQAKSWAAIVTKGAGDSPASPAPAATAPPAAAT
PTVAKPKHSPVLVPAEAPAAAPAPAAEAPPLAAAAAQQPAAPAAAAAAAA
MQQPIRQTAGSPRAAAIATNSLFVKNIDPSTQSSEVATAFERFGTVTQVD
LKPRPERCFAFVAFSSPDAVAEAIRVRDAGEEITLTERTLHYELRVDQPA
RSARGGHRGDRRYGRGFGRGRGRDRPAGDRPAALDKPAAAFSDKPAAADG
GSSEAKPNGDGGEASRGEGRGGRGRGRGPRDYRGGRGASRQSPPHAQPQQ
QQAKPTSSA*
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mRNA from alignment at Contig_48:866922..880360+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_12633 ID=mRNA_12633|Name=jgi.p|Trimin1|349769|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=13439bp|location=Sequence derived from alignment at Contig_48:866922..880360+ (Tribonema minus UTEX_B_3156 )
GCCACACAGGTCTGCCATCCTTTCCAGGTGAGAGCCACAGTGCTTCGCCG
GTGCCGGATCTCTTGCGGCACCTGCAGCGCCTCCGCTGCAGTGCGTGTTG
CTTGCCACAGGGTGTGTGCGGCTCTGATTTGATTTTCGGGACAGGGCATC
TGCTCAACTTTCGGATTGCGGCTGCAGCAGGAGAGGTGGCGCCGCAATGG
CCTTGCATAATGGTTTTGGAGATGGCATCGTCGTGGCCGCCGCTGCCTGC
ATGCTCAGCAATTGCCCGAGACCCTCAGAACTGGTACCACGCTCATCACT
GCCTCCGATGTCACCTTGGTCGCATAGGCTGTGATCCACAGCAACAAGCG
ATGGTACCGTACCGCGCTTGATAGCATGCCGCCAGCAACTTGAGCTGGTG
TCTCTCATGGGCTGGATCTCGACTGATTAAAAAAGCCGATTTGCTTTTTG
ATGTGCTGCTTCATTTTGATGTTGCCACAGGCAGTGAGACATGGCATCGT
CCTCCAAGGTCTCTGCAACAGTAGTCGGTCACCACTTTATAAAGTCTTTT
TACGGAGAGGTCCTGCCGCGCAAGCCTCTCGAGCTCCACCGCTTCTACTC
TGAGCAGGTGAGTGCGGGAGTGGGCACCCGGACTGCGTTCGCCAACGTTT
AGGCATACGTGCAGCAGGCATTGGCTATTGCGTTCAGTCATGTGCGCCAC
CTCCTTGGAGTACACTGAAAACAGCCTTCCTGCTAATTCTGCGGCAAAAG
CCACCGTGATGTCACCGCCAACTACAGACATCCGCAGCTTCAGAGGCGAT
CGCTGCCCCACGATTATAGACATGAAAGCGCAGCTCTGCTCTGCAGGATA
TGGCGTCTAGTTGCTGCACCACTAGCGCCGTACACTTGCACTGCAGGGCG
CTGCTATCCATTCTTCATGTTTGTCTCTGCCGTGAAGCGCATTTGCCTGC
TGTGGTTCAGGGGGATGAACCCTTGTTGAAGTGATGGAGCGGCAGTTACG
AAAACTGCGCTCACAGAGCTGGTGCCGCTGCAGGAGGTGCAGGTCATACA
GTGGTGGCTCACTGCGGCTCATCGTGGACTGGTGCAGACTTCGTGTTCAA
TAAAGGGTGCAGGTTAGGGTTAGGGTTAGGTGTTGGCCACGATGCTGTGT
GCATGCTCATCGTGAGCTCATCTTCACCAAACAACATTCCTCACACACAC
ATATGTCCGCGTTCCCCACCGCTGGTGCTGCTGCCGCCGATACTGCAGAG
TACCTTTTGCCATGCGGAGGGGAACAAGCAGGAGCAGCCTGTGATGGGGT
TGGAGAACATCAAGGAGAAGATCAGGGGGCTGGGGCTTGCGGATGCCACC
GTGGATCTGGACTGCGGATCTGTGGACATACAGGCGTCACAGAACGGTGA
GCGTCGTGTGCAAACTTCAACTTCAGTGCTTCCTTGTCTACGTCCATTAC
CAGTTGCAGTTGCAATCAGCATGGAATGATCTGAGAATGTTGGACATACA
AGCGTCACAGAACGGTAAGCAGCGTGCAAAAATCAACTTCAGTGGGTGCT
TCCTGATGTCCATTACAAGTTGCAGTTGCACGGTGAGCGTTGGGCATATA
GGCGTCGCAGAACGACGAGCGTGCAAACTTCAACTTTCAGGTGTCCTCGT
TCATCTCCATTGTGAGTTGCAGCTGCGAATACCAATGTGAGACTTGGACA
TACAGGCGTCACAGAATGGCAAGCGCACATACAATCTTCCACTTCAGTGC
GTCCTCGTCTTACGTCCAGTACGAGTTGCAGCTGTAAATGCCACCGTGAG
TCTTGGACACAGGCGTCCCAGACCGTAGACGGTGCAAACTTCAACTTCAG
TGGTTCTTATATTTCCACGACAAGTTGCAGTTGCGAATGCCGCCGTGGAT
CTGGACCGCGGATCTGCGGGCATGCAGGTGTCGCCCAACGGCACGCATGG
CAGAACCTCAGCTGCAAAGTTGTTGGTGACGCGCTACAGCAGGCTTCCAT
ATTACAAATCTGTTTTCTTTCGCGATGACCTGGAGGCGCATACGCTACAG
TGGATGAACACGGACTGTGAATCATATATATATATATAGAACCTCAGCTG
CAAAGTTGTTGGTGATCTACATATATGAAGAACCTCAGTTGCAAAGTTGT
TGGTGACGCGCCACAGCAGGCTTCACGACAACGAGTCCATTTTCTTCCAT
GATGACCTGGAGGTGCAGACGCTAACAGTGGCTGGTGATTGTGGAGCTGT
TGACACACAGGTCTTGCAGAAGTGATGCACGCGACAGTGCCTTGCTGTTG
AGGTGGTGGGAAGGTGGCCGGTGACGTGCCGCAACAGACTTGAAGTTCAA
CCTTCTGTGTCGAATTCCACCATAAAGCGTCACGCACATTTTTTGGCAGC
TGTTGAGTTGCCTGGAGGACCTGTATATGGCTCGCCGCTTAGGGCTAGGG
TTTGGAGCTTTAGGGTTTGGAGCTTAGGGCTAGGGTTTGAAGCTCTGTGA
GCAAACTGCAGCTTGCAGACTCTGCATACCTACCAGGTGTGGACTGCGGA
CGCCTCAACATGTTCATAGTGACGTCCCACAGCGGCCTTGACACTTCCAA
TCGCTTTGCCGTGGCGAGCTGCGCTTTGCAGGCGCTGTATTGTATATCCA
CTAGATCTGGACTGCGGATGAGTCGACTTGCAGGCCTTGCATAATGGTTT
GGTAACTCTCAGCAGCTGTTGAGGTAGCAGCAGAATTGTTGGTGTCTGGC
GGCAGCAGCAGTGTTTGCAAGCTCCCGCATGTTTTCCTTTCTGTCTGTGG
TGAGCAGCCTGCAACCAGACATTGCGGATTTATTCGGCAGACCGAGTCGT
GAATCGATTTTTGACCGAGTTCTACTCGCAACTCGGGGTCCCGGACACAC
CGATTAAAATCGGTGATAAATCACTCGGTCTGCTAGAGATGCTACAAAAA
ATTACTCGGTGTGGTGTCCCACACCGATTCTTCGAAGCTGCACATGTGGT
GTGTGGTGTGGTGGGGCCTTTCTGAAACGACGGAAGTCCCGAAAGGTCGA
ATCAAATCTTTTTATTCCGAAGTCGGGCCGACTTCGGGGTTACCGGGTTG
GTGTGCCAAAAATACGCTGTGCAGCAGAAAAAGCTGCAGTAGCAGATGCA
CTACAAAGCTGGAAGTCCCACCCCACTGCCTGCAGCCACATGCTCTAAGC
GCCTTCATGAAAAATGGCACGTGTGTGGAGTTTAGTATACTCAGTCATCG
AACGCAACAATGCTTCGGAGGTCGAGGACGCGCATCTCATGGAAGAGCAG
AAGCCTTTGGGAGGCTTCTGTAAGCTGCTGCAGCATAAAAGCTTGGCAAG
AAACGCGACGTAACTCGTCACATCAAGTTCGACAAAACCAGCAACAGCCT
GTTCCTCAGAAACTAGACTAATGCAACTTTCCTGTTTGAGGCGTGATCGA
ATCAAGAAGGACTCCGAGACGACGATGGACATTGCAATGCAATTGTAAAA
ATCGAATCATGTTGCCGCATTACTCGCCATTACTCGCCTAGCGAGGTGCT
GGTCATTTACTCGGGGGTCGAGTACAAATCGACTCGCTCTTTGGCTGACC
ACATTAATCATGACTCGGGCTGTTTGGCAGAGGGAGTTTACTCGGTGGCA
AATCGACTCGGATTTCACAAGTCACCCCAGCAACTCTACTCGGGGGTCAA
ACCTCATAAATCAGCAATGTCTGCCTGCAACAGCTTTTACGATTGCACGC
GGAATGTCATCTTGAAGATACATATCCGCGTTGGCAGCGTTCGTCACTTG
CGCCTCTTCGTTGCCAACGCTGCTCATCAGTATCTCAAGGGGGGTGACGT
CAGTGTTGAATCCAATCTCGGACTGCAGCTGAAATTCAAACCGCGGGTTG
AAGTTAGGGTTGAATCCGATCTCATACAGCTGATATCCAAACCGACAGCA
CCTCTGATGGTGATTATTGAGCAGGCAAAAAACCTCCAACTTTAACTCAT
TTGGCATGACATGTCAAACGCGCCCGTCTGACGGTGGCGGCACAGATATA
GTTTACGTGCGAGTGCAGGCACAGCGCCAGAAGAGCGCTGTCGTGCGACA
CATTGCGCTTCAACTCTAATGTGCTATGTTTGCACACCAGTTGTCACGAT
GAGTTCTTCACTTGACTGTGCAGGACTCCAAGTCTCAGTCATGTCATTTC
CTCGCTCTACCGACAGCAGCAGGTTTTTGTCAAGCATGCATGAGGTTGAT
CAGTAGGAGCAGCAGATGTCCAGATTGTGACGCTGCAGTTGAAGTTGCAG
TTGCAGTTGTGGTGCGACTGCAAGTGCGCATGTGCCGCTGCTGCAGACCC
ATCTCTGCCGAACAACTCTGAACCCTCCAACTCCAACCTCAAAGCTCGTA
CCATTCAACGGTTTGGAACCTCGAGCACACCGCCTGGTGGTGATGGCAGC
CGCCACAACTGCCTTGCCAGTTTTATCAAATTCAGCTCTGTCATAGTGGG
TCGGAGGATATGGTGTCCTTGTGATGGTGATGGGCATAAACCCACTGCGC
CAAGGCGCGATCCGCCTCAACCTTGCTAACTTCAAAATATTCACCATCGC
GCTGCCATACATTCAAGCACGCCGCCTGATGGTAATCGTCACGACTGGTT
TGTGAGCTTCAACTTCAGTCATCTAGCACCTCCATCTCAGGCAGCACCTG
GCGATGGTAGCGGGCACGCAATTGCACTGCGCCGTCAGGAAAGTGCACAC
CTCAAACTTTGCTAACTTCATCTTCAACTGTAATTCACGAAAACCACAGA
CAGCATCGTGCTTGATGGTGGCGGACGCGATCACGCTGCTGCAGTCGGAA
GTCAGTTTCAGCTATGCCAACTTCAACTTCAACTGCTGCCGTCATGACCC
ACCACAGGCAGTCCTCCTGCTGATGGTGACGGGCACGATCACGCCAGGCC
AGATGGCGAATGTCGGTTCGCTTCTTTACTTCAACTTTGATTGCCGTCAC
TTCAAGATAAACCACAGCATCTGCTTAACAACAACTTCAATTTGTGACAC
ATCACAGGCAGCAAGCTTCCTCCTGATGGTGATGGGCGCGTTATGCTTCA
GTCAAGCCAACCTCACTAATGCCAACTTCAACTTCAATTGTTGTCTGACA
TACTACAGGCAGCATCCTCCTGATGGTGACGGGCGCAATCACGCTGCGCG
GGCAGGCGCCGCGCCAGTTTGCGCAGACGTTCCTGCTGGCGACGCACCGC
CAGATGGACGGCCGCCACAACTTCTTTGTCCTCAACGACGTCTTCCGCCT
CCTGGACACCATCCCGGAGGTGCTCGAGGTGAGATTTACCGCCTGCGCCG
CTGACTTGCGTGTATACGCTGTTGCCGCCATGACGTCTGTTGCTTCCTGG
AGATGAGAGCGGCCGCCTGCGCCGCTGACTACGTGTCCCGATCTCACCAA
GCGGGCTGGCATGTACTTTTTATTAATTCTCGCTCAGGGCGCGAAAAAGC
CCAGATGAATGGCATCTAACTTGAAGCTTGCTGTACGGCATCTACATGTC
GTATGACAGTCTGAAAGTGTCTCAACTGTCCGTGTGACAACCTCTCAAAC
GCCGCCGCCGCCAAAACTGGCATGTACTCCTGGTGTACTCCTGGTGCACT
CACAAGCCCGTGCCCTGACTCGCCTGCTCTCTCATCACTCCTGTGTACCT
TTAACTTCAATTTGAAGTTCACCTCTTGCAGTGCTGACAACGCCCCTGTC
ACCCCCCTGGCGCTGCCCACCTCTCCTGCTTGCGAATGCGTGAACTGCTG
CCGCGTTTCTCACACACTCCCATGCTGCGCCCCCCTCGCAGGCGGCGTTG
GCGAAGGCCCGTCCTGCGCCGGCAGTTGCGTCGCCTGCAGCCGCGGCGCG
CCCAACGCCCCCCCCCTCCCCCCCTCGTGAGGCGCCCCGCGGCGCCGCGA
CCCCCCCTGCTGCAGGTGAGCCTGGTAGGAACCAAGTAAGGTAGGGGGAA
TGGAGTTTGAGCTAGGGGGAATGGGGTTTGGGTTTGGGTAAATATTGAAG
TATTTGCACACTCCCCAGCGGCCAGCAGCATGCATCATGCCCCCCCTCTC
TCCCCCGCGCGAGGCGCCCTGTGGCGCCGCCACCCCCCCTGCTGCAGGTG
AGCGTGGTGGGAGTTAGGTTTTATGTAGGGGGTGACGAAATCAGGGTGAC
GTTTGTGACCAGCCACCCGCCAGCGGTGCAGCTATATATGTCTGTTCACC
TGTTGTAACGACTTTACTCCAGCTCCATTTTTCAACTGCACGTGAGCCAC
GAGGCTAGTTGCCCCCCTTACCTCGGCCTTGCAGCCATCATCGCAGGCCT
TTAACTTGTACCTCAAGTAGAAGTTGTATAGCAAGTAGAAGCAATAGCGC
TGTTTCTTCGATAAGAGCCGTGCTTGCACCAGTACGTTCGCCCGCTACTG
CAGGCAGATGCAGGTGCAAAGCCACCTGACACTAACTTTCACTTACCCCG
AGCACTGCACCGGCCCGGAATCGTGCGACCAGAAGCAGGCGCCTGTCCGC
CACCGAAGAGCACACCTTGTCATGCCACCTTACAAGACGCTGAAGCTACA
TTGAGTTCAAATTTGAGGTAACAGTTGCGGTGCGTCAACCATGCTCATGT
ATGCACCCCCCACCCCCCGCCGCACGCAGGCGCCTCCCCGCCACACAATG
TCATGCCAACTTCAAAGGCACAAAAGCTGCAACTCATACTTTGAGTTCAA
ATCAGAAGTTACACTTTCTGGTGCGTCACCACACTCACGTATGCACCCCC
CACCCCCCACCACACGCAGGCGCCTCCCCGCCACCCCCCGCCCCCCCCGC
GCGCGCCCGCTCCCCCTCCCCCGCACGCCCCAAAACCCCCCCTCCGCAGC
CCAAGGCCCCCCCAGCCCCCGCGCCAGTCCCCCAACCGTCGTCCCCCACG
CCAAACCCTAGCACCAGGGCTTGGGACGGGGCCGCAGCCAGCGGCGGCTG
GGAATCAGGGGGGGCGTCGGGCGGGTGGGATTCGGGGGACGGCGGTTGGG
GGCAGGGTGCTGCTGCGGCTGCTCCCGCGGCTGCGCCGGCGCCGGCAGCG
CCTGCGGCAGCAGCGTCGCCGCCGCCGCCGGCAGCAGCGCCTGCGCCGGC
GGCAGCAGTGGCGGCAGCACCGGCGAAGCAGGCGTCGCGGCGCGCGCGTT
CCCCTTCCTCTGCGGTGAGTTCTTGAAGGGCGCAGTGCGGATTACATGTT
GAAGTTTCCAATTTGAAGTTTGTAGTTGAGTGACCTACCGATGTGCAGGC
GGAGTGAGTTCAGGGTTGCGTCTGGTGTCGGCGCAGCGCTGTTAAGCGTG
CAATGTGAGGGGCCGTCTACGCGCGATCGGCCGCTCGCTGAGCACTGACA
CTCATGTGCCAGTGACTCTCCTTCATAAAACGAGGTGAACCAGCCGCACC
CTCTCACGTGAACCCCCATGTTGCAAGCCTTGGCATGCTCCCCAAGTGCC
TGTATCGAATGTGTCTCCTCGCTGCACGAGCTCCGCAATCCCACCTGCAG
GTAACAACTTCAATTATCAGTTCAACTGCTTGAAGTACGCCCTGTCAGGG
TATGGCTGCCTAATGCGGATGGCATTACATATGGGCTTCCTTGCTTTTTC
ACAAGTTAGCTTTAGCTTTAGCTTTATGGTATCGGACAGGAACTGCAACA
AGCAATGATTCCACATGCGTGAATTGATGTTCTGAAGTACCGCGCATAAA
AACTCAAGACCATCTGCTTCTGCAGAAAAAAAACATGATTGCTTGCGTTT
CTCCGCTTCTGTGCAGCCTGTGGACGAAACCCCCCAGGCCAAGTCCTGGG
CGGCGATTGTCACAAAGGGCGCTGGTGACTCTCCCGCATCCCCCGCCCCC
GCGGCCACCGCCCCCCCCGCCGCCGCCACCCCCACCGTCGCAAAGCCAAA
GCACAGCCCGGTGCTCGTGCCTGCAGAGGCGCCTGCTGCTGCGCCGGCTC
CTGCTGCGGAAGCTCCGCCGCTGGCGGCAGCGGCTGCGCAGCAACCCGCA
GCGCCTGCCGCCGCCGCCGCTGCTGCTGCCATGCAGCAGCCTATCCGACA
GGTGAGGGCCGCGCGCACTGGTTAGTGTTGCTCGCTTGCTTGGCGGTCGG
TGCTGCAGCGTGCCGCCAGCTGAGCTGTTGTGATTGATGCTGTGCATTGA
TATCCACAGTGTTCAGTGGCTCGGACTTATGTGTTGCATTTGTTGGTGCA
TGCGCAAAGCGTCCAGTACTTTACGCTGCCCTTGTTTGCTCAGTGAACTT
GCGCTTGCGCGCACGCCGCGTGCTGCATGCTGATCGCTGCAGCTCCTGTG
CCAACGACAGGCTCAGATCAGTGAGATTTCAATGCTTAGCAAACCCACAA
TGCACCTTACTCAGCCACGGCAGCAATTGTACTCGCACAAAACATGCGAC
GCTCTGGCTTGCACATAATTTTGTGTCATGGACCTTGCCTACCTAGTGTA
GTCTAGTCTAGGCTGCATGTCGCCTCGTGCTGTGCAATGCCCCCCCTCCC
CCCGCCCCCCGTCCCCTGCAAGTTTACAAGTGTACTCACTCTGGACTGGA
CTGTGCTGTACTGTGCTGCGCCGTGCTGCAGACTGCGGGCAGCCCAAGAG
CCGCCGCGATCGCGACCAACAGCCTCTTTGTCAAGAACATCGACCCCTCT
ACGCAGAGCTCTGAAGTCGCGACGGCGTTTGAGAGGTTCGGCACCGTCAC
ACAGGTGAGCGCTTCTGCAGCTGATTGAGCAATGCTGCTCTGCGTTGACA
AACGTGACTGATCAGTGCAGTGTTAGCGTTATTATCAGGGTGACAACGCC
GTTCTTGAGAGATCTGGCACGTTCACACAGGCAAGCGCTGCTGCTTTGCA
CCGACAAACATGGCTCGGTCAGCGCAGCGTTCGCGATTTGTTAGGGTGGC
AATGGGATTTGCCAGGTTTGGCGCAGTCACACACGTGCATGCGTGCTGCT
GCAGCTTGTTGAGCAATGCGGGTTGTTGCCGAGATATACGGGCTCGATCA
TTTTGCAGCATATGCTTTTAGGCAGGGTCGCGACGGCGTTTTAGGAGGTT
CGGCACTGTCACACAGGTGAGCACTGCTGCAGCTTGTTGAGCTATGCTGG
TTGTTGCCGAGAATACACGAGGCACGGTCATCTGCAGCACGTGCTTCGTA
GGCAGGGTGGCGACGGCATTTAGTGAGGTTTGGCATACGTCTGCTTGTTG
AGTACCACTGCTTTGCGCAGACAAAGGCACCTACGGTATTTCAAGTGTCG
CCATGCTCTGCGACATGCATCTTCAACTGCAATCTTCAACTCCCCACGTG
TAGGCGCCTTGCGGCTCTTCGCCTGGCGATCTGGTTTGCGTTGTACTACA
CCGACTGAGCTTAACTTTCCAACAACATACATGCTGTGGCAGGTGGACTT
GAAACCTCGCCCGGAGCGCTGTTTCGCGTTTGTGGCCTTCTCATCTCCGG
ACGCTGTTGCCGAGGCCATCAGGGTCCGCGACGCCGGCGAGGTAAACTTC
AATTACTTGAAGTTCAATGCAGGACTTGAAGAAGTTTGATGCCATGCGCG
CACTGAGGCTGGTTTTGTGGGAAGCAGACAGAGGAACTGACGGCTTGAGC
GTGTGATACGTACGTGCATACTGCAGTCCAAGTGGTGATTTTGCTGCGAT
GGTTTCAGAACTTCAATTGCGAAGTCGAATCAGCGTCAAGCATAGTCTGT
TGCCATTGCCGAGCTGGGAATGCTAGCACAAGTGCCAGAGCAGCGTCTGA
TCACGTTGTCACTCTACCCGTGCAATCGGCGGTGAGAGGAGGTCAGTGTA
TAGACTTGCGGTGCACAGCAACCTGATTGATGTGATTAGTAATAGCTTAG
GTGCGTGATGATTCACGAGTACCTTTTATGTACGTGCACCTCAAATTCGC
TCATGGGGCACAGCACCCCCTCCTGTCCTGATCCTGCAGACAGGTGGTTT
GGACTTGTAGTCTTGCTAGGGGTGTGCACCTCATGCCAATGTCACCCGAT
CCTTGAGCGGCCCTGCAGCAACAATGCTAACCTCAATTTCAACTTCAACT
TGCTGGCCGCCGTCTCTGCCGCAGCAGGAGATCACATTGACTGAGCGAAC
GCTGCACTACGAGCTGCGGGTCGACCAGCCTGCGAGGAGCGCGCGGGGGG
GGCACCGTGGCGACAGGTAGGTTGAAGTTGAAGTTGAACTTTGTCTCACT
TGAACTTGAAGTTGTTGGCTTCATATGAGCTGCGGGTAGACCAGCCTGCG
AGCAGTGCGCGGGGGAGACACCGCGGTGACAGGTAGGTTGAAGTTGAACT
TTAGCATGAGTTGAAGGGGCAGCACTTGAACTTTAAGATGCGGAGTTTGA
CAACATCACGATCAGGCTGCTGCGCTTCGATAATGCAGTATGTGTGTAAC
TGTGATGTTGAAGTAAAGCGTGAGCTTGCGGCTGTGGTGACAGGTCGGCA
GGTGACCTATACTTTGGCATGACTTCTGCGCAGAGTAGCCGACACGCCAA
GCTGACGTGATGATTCTGCCTCAGCATCTGACGCTCAGACTCTATTACGC
ATGTGCACCAGACAGCTGACCTCGTTCGCATCGTATTCAACGCAAGCCTG
CAAGTGCCAGATGAACTGTAATGAAATCCCAGAGACACTCGCCAGATGCC
ATACATGTACTGACCCCAATCCGATCTCCAGCCCTAAATTGTGGCTTACT
GACCCCAAATCTATCAGGGGTTGTCACGACTCCTCAAAACCTGGACAACT
CCGACTCCGCTCCGGGGAGCAGTGACTCGCGGGCCTACGACTCCGACTCC
GCTCCGAGGAGGTGGCACCAATCGTTGGACGACTCCGACTCCAACTCCGG
GAAGCAATGAGCCGGCCCAAACGACTCCACTCCGCTCCGGCCGGAGTGGA
GTGGAGTCGGAGCGGAGTCACCGACGACTCCGGTCCGACTCCGCTCCTGC
CTATTAGTAGCCAATACCACCTTACACAACGTCTGTCGCTCAGCCCAGCT
ACTTGCAGCCACAGTCCGGCACCGCATTGCACCGTTGCACCGAATATATG
CGTGTTTGCGCACGTGCATGCGTGCTCCAGGAGTCGGGGCCATATGCTCC
GGAGCAACTGTTTGACTCCGCTCCGACTTCGGCCGGAGCAACTTGCTCGG
CAAACGACTCCAACTCCGCGGAGCAATGAGATATGCCGAGCGACTCCGAC
TCCGCTCCGTTCGGAGCAGAGTCGGAGCGGAATCAGAGACGACTCCGAGC
GGGGAGTCGTGACAACCCCTGAAATCTATCCCTAGCCTTAGATTAAACCT
CATTGCATCGCACTGCCCAGAGGCACCCGCCATGTGCCATAAATTGACCC
CAATCCCATCCCCAACGCTCACCCTAAGGTATCGCATCTAACCCTAAGTT
CATCGCATCTGGTCACGGTGCTGCAGGCGGTATGGACGCGGTTTCGGCCG
TGGCCGCGGCCGCGACCGGCCAGCCGGCGACAGGCCAGCAGCGCTCGACA
AACCTGCGGCGGCTTTCAGCGATAAGCCCGCAGCAGCGGATGGTGGCTCC
TCTGAGGCCAAGCCAAATGGCGATGGAGGGGAGGCTTCGCGGGGAGAGGG
GAGGGGGGGGCGCGGACGCGGCAGGGGCCCCAGAGGTATGTAGGGTATGG
TGCGCCTATGCAGGGTACGGAGCGCCCAATGTCTGCAGCATCAGTCGTTT
TGGTGGCATCGAATTTAGGCGGTGGTATGCAAGGGGGAGGGGGGGGGGGG
GGGGGGGCGCTCACGCGGCAGGGGCCCCAGAGGTATGTAGGGTATGGTGC
GTCTGTTGTCTGAGTGTTGTTGTTGCGGTTTGCATCGTTTTGTGGTGAGG
GTGTGCAAGGGGGACGAGAGGGAAGCGGCAGATGCTCAGAGGCCCTAGGC
GTGCGGCGTGCATCATATCTTGGTGGTAATAGGCAAGGGGGAGAGGGGGG
GGGGCGCGGATGCGGCAGGGGCCCCAGAGGTATGTAGGGTATGGCGCGCA
TAATGTCTGCGCGTTGGTGTTGCAGTTTGCATCGAATTTTGGTGTTGGGT
TGCAAGTGTTGTTGCGGCTTGCATTGTACCGTGGTGGCAGTAGTATGCAA
GGGGGAGGGGAGGGGGGGGGGCGGCAGACGCGGCAGGGGGCCCAGAGGTA
TGTAGGGTACGGCGTGCCTGGTGTCTGAGCACTGTTGTTGCGGTTGGCAT
CGTATTGTGGTGGTGGTGTGCAAGAGGGATGAGAGGGGAGGGGCAGATGC
TCAGGAGCCCCAGAAGATATGGAGTCCACAATCGACTCCTCCCTGCTGCC
TGCCTAATGTCTGCAGCATTGTCTCTTGCGGCTTGCTTCGGATTGTGGTG
GTGGTGTGCGAGGGGGATCGGTGATCTTTGCGGTTCGCATTGAATTGTGG
TGGCGGTTTGCAAGTGTTCTTGCGACTTGCATTTACGGTGGTGATGACAC
TATGCAAGGGGGAGGGGCCAAGGGCTCCAGAGGTATGTAGGGTATGCTGG
CTTATATCTGCGCGTTGGTCATAACAGCTAGGATCGTGTTGTAATGGTAT
GCAAGTTGGGGGGCGGGGGGGTGGGGGGGGGGGCGCGGGATATACCGGGT
CCCCAGAGCTATGTAAGTAAGGTTTGCCAAGTTTGGCGGTGAGTTATAGC
TTGTATCGCAGTGGTAGTGGTACACAAGTGGAGAACCGCGGACGTGACAG
GGCCCCAGAGCTATGAAGGGCCTGATGGAGGGACAGTTACATGGTGGTTT
CGCGGGATTGGCGTCGTCTAGTTGGTGACGCTCAGAGTATGCATGATATA
TGTGTAGGTATACATGTATGGCCTGCATCCCATGCACGCGGATGACAGAG
GCAGTGCTGAGCACAGCTCTGGTGATACAGAGAAGGCCATATTGGCTCAA
CTATACATGGAGCGATACATCGCCTAGCGCACCAATGACTGCACTGCTCC
GGTGTGGTGCCTAATCAACACCTTTATCAGCACCAAAGTGCATAATGAGA
TGCTCATACCCCCCCCCCCCCGCCCCGCCCCCCCCGTTTCTCCTCATCGC
AGATTACAGGGGCGGCCGCGGCGCCTCCCGACAGAGCCCACCGCACGCGC
AGCCGCAGCAGCAGCAGGCAAAGCCGACGTCATCCGCTTAGCGGCGTGTG
TGCGTGGGTGGAGGCGAGCGCCGCCACACAAACTTCAACTTGAGGTTGAC
GCGGCGCGCGGCTGCCGCGCACGGAAACCTGGGTTTGCGCGTGCGCGCCG
CGCACTTTGCAGAAAAGAAACAAGAAACGTCCTTAAAAAACAACAATCAC
ACAGAAATTGGCAGCTGCTGCGGGTGGGAAGGCACGGGCAGCTGCCCCCT
GCATCAAGTCCGGGGCTCTCTTGAGAGCACTGGCAAGAG
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Coding sequence (CDS) from alignment at Contig_48:866922..880360+

>mRNA_12633 ID=mRNA_12633|Name=jgi.p|Trimin1|349769|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1830bp|location=Sequence derived from alignment at Contig_48:866922..880360+ (Tribonema minus UTEX_B_3156 )
ATGGCATCGTCCTCCAAGGTCTCTGCAACAGTAGTCGGTCACCACTTTAT
AAAGTCTTTTTACGGAGAGGTCCTGCCGCGCAAGCCTCTCGAGCTCCACC
GCTTCTACTCTGAGCAGAGTACCTTTTGCCATGCGGAGGGGAACAAGCAG
GAGCAGCCTGTGATGGGGTTGGAGAACATCAAGGAGAAGATCAGGGGGCT
GGGGCTTGCGGATGCCACCGTGGATCTGGACTGCGGATCTGTGGACATAC
AGGCGTCACAGAACGGCAGCATCCTCCTGATGGTGACGGGCGCAATCACG
CTGCGCGGGCAGGCGCCGCGCCAGTTTGCGCAGACGTTCCTGCTGGCGAC
GCACCGCCAGATGGACGGCCGCCACAACTTCTTTGTCCTCAACGACGTCT
TCCGCCTCCTGGACACCATCCCGGAGGTGCTCGAGGCGGCGTTGGCGAAG
GCCCGTCCTGCGCCGGCAGTTGCGCGCCCCGCGGCGCCGCGACCCCCCCT
GCTGCAGGCGCCCTGTGGCGCCGCCACCCCCCCTGCTGCAGGCGCCTCCC
CGCCACCCCCCGCCCCCCCCGCGCGCGCCCGCTCCCCCTCCCCCGCACGC
CCCAAAACCCCCCCTCCGCAGCCCAAGGCCCCCCCAGCCCCCGCGCCAGT
CCCCCAACCGTCGTCCCCCACGCCAAACCCTAGCACCAGGGCTTGGGACG
GGGCCGCAGCCAGCGGCGGCTGGGAATCAGGGGGGGCGTCGGGCGGGTGG
GATTCGGGGGACGGCGGTTGGGGGCAGGGTGCTGCTGCGGCTGCTCCCGC
GGCTGCGCCGGCGCCGGCAGCGCCTGCGGCAGCAGCGTCGCCGCCGCCGC
CGGCAGCAGCGCCTGCGCCGGCGGCAGCAGTGGCGGCAGCACCGGCGAAG
CAGGCGTCGCGGCGCGCGCGTTCCCCTTCCTCTGCGCCTGTGGACGAAAC
CCCCCAGGCCAAGTCCTGGGCGGCGATTGTCACAAAGGGCGCTGGTGACT
CTCCCGCATCCCCCGCCCCCGCGGCCACCGCCCCCCCCGCCGCCGCCACC
CCCACCGTCGCAAAGCCAAAGCACAGCCCGGTGCTCGTGCCTGCAGAGGC
GCCTGCTGCTGCGCCGGCTCCTGCTGCGGAAGCTCCGCCGCTGGCGGCAG
CGGCTGCGCAGCAACCCGCAGCGCCTGCCGCCGCCGCCGCTGCTGCTGCC
ATGCAGCAGCCTATCCGACAGACTGCGGGCAGCCCAAGAGCCGCCGCGAT
CGCGACCAACAGCCTCTTTGTCAAGAACATCGACCCCTCTACGCAGAGCT
CTGAAGTCGCGACGGCGTTTGAGAGGTTCGGCACCGTCACACAGGTGGAC
TTGAAACCTCGCCCGGAGCGCTGTTTCGCGTTTGTGGCCTTCTCATCTCC
GGACGCTGTTGCCGAGGCCATCAGGGTCCGCGACGCCGGCGAGGAGATCA
CATTGACTGAGCGAACGCTGCACTACGAGCTGCGGGTCGACCAGCCTGCG
AGGAGCGCGCGGGGGGGGCACCGTGGCGACAGGCGGTATGGACGCGGTTT
CGGCCGTGGCCGCGGCCGCGACCGGCCAGCCGGCGACAGGCCAGCAGCGC
TCGACAAACCTGCGGCGGCTTTCAGCGATAAGCCCGCAGCAGCGGATGGT
GGCTCCTCTGAGGCCAAGCCAAATGGCGATGGAGGGGAGGCTTCGCGGGG
AGAGGGGAGGGGGGGGCGCGGACGCGGCAGGGGCCCCAGAGATTACAGGG
GCGGCCGCGGCGCCTCCCGACAGAGCCCACCGCACGCGCAGCCGCAGCAG
CAGCAGGCAAAGCCGACGTCATCCGCTTAG
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