mRNA_12570 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|349740
Unique NamemRNA_12570
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|349740 vs. uniprot
Match: A0A835YST0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YST0_9STRA)

HSP 1 Score: 489 bits (1260), Expect = 6.060e-174
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 1 
Query:    1 MRCKYTASPGASEMGESLITCCAKAAFDIDCRQQRFLLWTRNMVDYDAGHSHTSFAYHCAFWEAYSLNRTLVLDSFAGMGREWDIAAALKPAYRFGFQVCHPKKRKVEKNTFHEPADLNFTMPKEYRYPTLDYDTSPDGIHKTIEPYVPHGSTLYIATNERDPVTFFKPLEQYYTVLSLAHFPEFLHFENFLPSTLALIDYAVLVSTACDMSIPTFASELSRGFPEYISLSQLLK 705
            MRCKYTASPGASEMGESLITCCAKAAFDIDCRQQRFLLWTRNMVDYDAGHSHTSFAYHCAFWEAYSLNRTLVLDSFAGMGREWDIAAALKPAYRFGFQVCHPKKRKVEKNTFHEPADLNFTMPKEYRYPTLDYDTSPDGIHKTIEPYVPHGSTLYIATNERDPVTFFKPLEQYYTVLSLAHFPEFLHFENFLPSTLALIDYAVLVSTACDMSIPTFASELSRGFPEYISLSQLLK
Sbjct:    1 MRCKYTASPGASEMGESLITCCAKAAFDIDCRQQRFLLWTRNMVDYDAGHSHTSFAYHCAFWEAYSLNRTLVLDSFAGMGREWDIAAALKPAYRFGFQVCHPKKRKVEKNTFHEPADLNFTMPKEYRYPTLDYDTSPDGIHKTIEPYVPHGSTLYIATNERDPVTFFKPLEQYYTVLSLAHFPEFLHFENFLPSTLALIDYAVLVSTACDMSIPTFASELSRGFPEYISLSQLLK 235
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BLAST of jgi.p|Trimin1|349740 vs. uniprot
Match: A0A835ZE24_9STRA (Sulfotransfer_1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE24_9STRA)

HSP 1 Score: 199 bits (507), Expect = 1.070e-55
Identity = 104/217 (47.93%), Postives = 135/217 (62.21%), Query Frame = 1 
Query:  100 QRFLLWTRNMVDYDAGHSHTSFAYHCAFWEAYSLNRTLVLDSFAGMGREWDI--------------------AAALKPAYRFGFQVCHPKKRKVEKNTFHEPADLNFTMPKEYRYPTLDYDTSPDGIHKTIEPYVPHGSTLYIATNERDPVTFFKPLEQYYTVLSLAHFPEFLHFENFLPSTLALIDYAVLVSTACDMSIPTFASELSRGFPEYISL 690
            +R+LLWTRN+ D+ AGHSH  F+  CA WEAYSLNRTLVLD+F GM     +                        +P   +G+Q+CH           +EP  +++ +PKE+RYP LD++TSP GI +TI+ +VPHGSTLYIATNE DPVTFFKPLE++Y + SLAH  + L    FL STL ++DY +L    C M IPTF +E SRGF   +SL
Sbjct:    9 KRYLLWTRNLQDFGAGHSHKWFSLSCALWEAYSLNRTLVLDTFVGMNNTESLKKLPAGGMLYHDFLQDCGKPGILRQPQSIYGYQICHRSDTPDSMGFVNEPG-VDYNLPKEFRYPNLDHETSPAGILETIQQHVPHGSTLYIATNEPDPVTFFKPLEEHYVLQSLAHLTDVLDSSQFLRSTLGVVDYTIL--DRCPMMIPTFRTEKSRGFDTVLSL 222
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BLAST of jgi.p|Trimin1|349740 vs. uniprot
Match: A0A835ZNY4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZNY4_9STRA)

HSP 1 Score: 170 bits (431), Expect = 2.110e-45
Identity = 116/382 (30.37%), Postives = 149/382 (39.01%), Query Frame = 1 
Query:   88 DCRQQRFLLWTRNMVDYDAGHSHTSFAYHCAFWEAYSLNRTLVLDSFAGMG-------------------------------------------------------------------------------------------------------------------------------REWDIAAALKPAYRFGFQVCHPKKRKVEKNTFHEPADLNFTMPKEY----------------------------------------------------RYPTLDYDTSPDGIHKTIEPYVPHGSTLYIATNERDPVTFFKPLEQYYTVLSLAHFPEFLHFENFLPSTLALIDYAVLVSTACDMSIPTFASELSRGFPEYISLSQ 696
            DCR+QRFLLWTRNM D+ AGHSH  F+  CAFWEA +LNRTL++DSFAGM                                                                                                                                REWD    L P  +FGFQVCH K         H    +++T+PK+                                                     RYP LDY+TSP+GI  TIEP+V HGS LYIATN++DPV FF PL+  YT ++L HFP+ +    +LPS++A++DY V+    CD  IPTFASE S+GFP+++SLS+
Sbjct:  139 DCREQRFLLWTRNMADFMAGHSHKRFSMSCAFWEAQALNRTLIIDSFAGMNKEHTQTEISVEAPFAAWYSTKLFDLLSAGGMLYHQFVQGCGAPGVLQEVRISLPYVLTHDSDIHLLLNRLLRAFDHHSNARRTLPHWFVVVGGASKALQEAAGDVAIMPSGSSHAEMVAQAGVPLLVREWDRRVKLTPEAKFGFQVCHQKPE-------HREEGVDYTLPKKLWNVWYAKWVYRIVDGIMRDMKKETALSTTKDAMVVCLHVRRGDKLTIEVDKERYPNLDYETSPEGIMATIEPFVSHGSVLYIATNQQDPVAFFAPLQARYTAMTLYHFPKRIPAHRYLPSSMAMVDYEVM--DKCDRLIPTFASEESKGFPQHVSLSK 511
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BLAST of jgi.p|Trimin1|349740 vs. uniprot
Match: A0A835Z745_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z745_9STRA)

HSP 1 Score: 162 bits (410), Expect = 1.600e-41
Identity = 122/367 (33.24%), Postives = 153/367 (41.69%), Query Frame = 1 
Query:   88 DCRQQRFLLWTRNMVDYDAGHSHTSFAYHCAFWEAYSLNRTLVLDSFAGMG---------------------------------------------------------------------------REWDI------AAALKPA-----YRFGFQVCH-PKKRKVE-KNTFHEPADLNFTMPK-------------------------------------------------------------------------EYRYPTLDYDTSPDGIHKTIEPYVPHGSTLYIATNERDPVTFFKPLEQYYTVLSLAHFPEFLHFENFLPSTLALIDYAVLVSTACDMSIPTFASELSRGFPEYISLSQLLK 705
            +CR QRFLLWTRN +DY+AGHSHT+F+  CAFWEA  LNRTLVLDSFAG+                                                                            R+W        AAAL+ A      RFGFQVCH P++ + +  + F EP  +++ +P                                                                            +YP LD+DTSP GI++TI  YVP GSTL+IATNERDPV FF+PLE +Y V SLAH+P  L    FL STLAL+DY +L    C + IPTF  E +RGF   ++LS L K
Sbjct:  316 ECRSQRFLLWTRNWLDYNAGHSHTTFSLSCAFWEAQRLNRTLVLDSFAGINKLHFGGNFHGDVPYKAWFNPACLSKLDRGGMFYHEFARGCGAPGVLPEESGDAVVMPSGATHAEMLAHADAPLLVRQWQYDQGDYAAAALRSAPDAFTSRFGFQVCHRPERARADYPSVFKEPG-VDYALPPGIWSRIYSEWVYRTAKVIAGDLWRTTRARGDAAAAAAAVDSAQHGAAPAAAAVTGMVVCLHVRRGDKITNPNVSKKYPDLDFDTSPAGIYRTISLYVPDGSTLFIATNERDPVAFFRPLEAHYRVTSLAHYPTILAPGAFLGSTLALVDYTIL-GGQCPLLIPTFTGETARGFDYDLALSLLHK 680
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BLAST of jgi.p|Trimin1|349740 vs. uniprot
Match: A0A835Z0A5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0A5_9STRA)

HSP 1 Score: 154 bits (390), Expect = 7.230e-40
Identity = 118/373 (31.64%), Postives = 150/373 (40.21%), Query Frame = 1 
Query:   91 CRQQRFLLWTRNMVDYDAGHSHTSFAYHCAFWEAYSLNRTLVLDSFAGMGR--------------EW--------------------------------------------------------------------------------------DIAA------------------ALKPAYRFGFQVCHPKKRKVEK--NTFHEPADLNFTMP-----KEY-------------------------------------------RYPTLDYDTSPDGIHKTIEPYVPHGSTLYIATNERDPVTFFKPLEQYYTVLSLAHFPEFLHFENFLPSTLALIDYAVLVSTACDMSIPTFASELSRGFPEYISLSQLLK 705
            CR QRF+LWTRN +D++ GHSH  ++ HCAFWEAYSLNRTLVLDSF GM R               W                                                                                      D+AA                  A +PA+RFGFQVCHP +    +      EP  ++++ P     K+Y                                           RYP LDYDTSP+GI +TI+P++  GSTLY ATN++D   FF PLE  Y V +L H+ + L  E FL  +LAL+DYAVL+   C   +PTF SE SRGF  ++SLS L K
Sbjct:   92 CRSQRFMLWTRNSMDHEVGHSHKWYSLHCAFWEAYSLNRTLVLDSFLGMSRIHADEDYNAEVPYPVWYSTKGLERARAGAMFYHDFVRDCGAPGVFHVLSSLVAVLSVCTXXXXXXXXXXVGGRGILATASGAATAAAAVPDVALMPSGSTHADMAARADVPLLVRHWDHDDRSNATRPAFRFGFQVCHPPETADARYPTGAREPG-VDYSFPRKLWGKKYAPWVYDMARYILSDMWKDKKPGLKIACIHVRRGDKVELESQKQRYPNLDYDTSPEGIRRTIKPWLNPGSTLYFATNQKDAKAFFAPLEDEYIVRTLEHYSDVLPPEKFLSPSLALVDYAVLIG-GCPTLLPTFVSEESRGFGPHLSLSPLPK 462
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BLAST of jgi.p|Trimin1|349740 vs. uniprot
Match: A0A835ZJK4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJK4_9STRA)

HSP 1 Score: 123 bits (309), Expect = 6.670e-30
Identity = 59/105 (56.19%), Postives = 81/105 (77.14%), Query Frame = 1 
Query:  379 RYPTLDYDTSPDGIHKTIEPYVPHGSTLYIATNERDPVTFFKPLEQYYTVLSLAHFPEFLHFENFLPSTLALIDYAVLVSTACDMSIPTFASELSRGFPEYISLS 693
            +YP L+Y+TSP+GI KTIEP+VPHGS LY+ATNE DPV +F+PL ++Y V+SLAHF   L  + +L S+L L+DY +L    C  +IPTFASE ++GF +++SLS
Sbjct:  150 KYPNLNYETSPEGILKTIEPHVPHGSVLYLATNEPDPVAYFEPLRKHYDVVSLAHFARLLSTDLYLLSSLGLVDYEILGK--CQRTIPTFASEDAKGFKQHVSLS 252
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BLAST of jgi.p|Trimin1|349740 vs. uniprot
Match: A0A836CEQ0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEQ0_9STRA)

HSP 1 Score: 122 bits (306), Expect = 6.880e-29
Identity = 58/103 (56.31%), Postives = 78/103 (75.73%), Query Frame = 1 
Query:  373 EYRYPTLDYDTSPDGIHKTIEPYVPHGSTLYIATNERDPVTFFKPLEQYYTVLSLAHFPEFLHFENFLPSTLALIDYAVLVSTACDMSIPTFASELSRGFPEY 681
            ++RYP LDY+TSP+GI K IE +VPHGS LYIATN+ DPV FF+PL+ +YT ++L HFP+ +    +LPS++AL+DY V+    CD  IP FASE SRGF ++
Sbjct:  197 QFRYPNLDYETSPEGILKAIELFVPHGSVLYIATNQEDPVAFFEPLQAHYTAVTLYHFPKRILPHKYLPSSMALVDYEVM--DKCDRLIPKFASEESRGFEQH 297
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BLAST of jgi.p|Trimin1|349740 vs. uniprot
Match: A0A835ZFK4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFK4_9STRA)

HSP 1 Score: 112 bits (279), Expect = 4.840e-27
Identity = 59/117 (50.43%), Postives = 79/117 (67.52%), Query Frame = 1 
Query:  346 ADLNFTMPKEYRYPTLDYDTSPDGIHKTIEPYVPHGSTLYIATNERDPVTFFKPLEQYYTVLSLAHFPEFLHFENFLPSTLALIDYAVLVSTACDMSIPTFASELSRGFPEYISLSQ 696
             D   T   + RYP L  +TSP+GI  TIEP+VPHGS L+IATNE    TFF PL ++Y V +L H P+ L+ ++FL S+LA+IDY VL    C   IPTF SE ++GF ++I+LS+
Sbjct:    8 GDKIATPKNQERYPNLAAETSPEGILATIEPHVPHGSVLFIATNEPQVRTFFDPLREHYEVFTLVHVPDILNPDDFLGSSLAMIDYEVL--DKCQQVIPTFYSEHTKGFDQHITLSK 122
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BLAST of jgi.p|Trimin1|349740 vs. uniprot
Match: A0A835Z813_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z813_9STRA)

HSP 1 Score: 111 bits (277), Expect = 9.540e-24
Identity = 69/140 (49.29%), Postives = 85/140 (60.71%), Query Frame = 1 
Query:  379 RYPTLDYDTSPDGIHKTIEPYVPHGSTLYIATNERDPVTFFKPLEQYYTVLSLAHFPEFLHFENFLPSTLALIDYAVLVSTACDMSIPTFASELSRGFPEYISLSQLLK*AWPPSR*TI*ATAEVVYTLVAQ---VEGLC 789
            RYPTLD DTSP  I   + P+VP G+ LYIATNE D   FF  L  +YT ++LA FP     + +LPS+LAL+DYAV+  + C   +PTFASE SRGF   +SLSQL K   PP+     A    V  L A+   V GLC
Sbjct:  216 RYPTLDRDTSPAHILDVLRPHVPEGALLYIATNEPDAAAFFADLWPHYTAVTLADFPHLAPPDAYLPSSLALVDYAVI--SRCRRLVPTFASERSRGFDAPLSLSQLQK---PPAEALTTAALNSVICLRARRTRVCGLC 350
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BLAST of jgi.p|Trimin1|349740 vs. uniprot
Match: A0A835YJ14_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ14_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 1.440e-16
Identity = 45/66 (68.18%), Postives = 49/66 (74.24%), Query Frame = 1 
Query:  406 SPDGIHKTIEPYVPHGSTLYIATNERDPVTFFKPLEQYYTVLSLAHFPEFLHFENFLPSTLALIDY 603
            SPDGI   IE  VPHGS L+IATNE DPV FF PL  YY VLSLAHF E L+   FLPS+LAL+DY
Sbjct:  122 SPDGIRAAIERLVPHGSVLFIATNEPDPVAFFAPLGAYYEVLSLAHFAERLNTTRFLPSSLALVDY 187
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349740 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A835YST0_9STRA6.060e-174100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZE24_9STRA1.070e-5547.93Sulfotransfer_1 domain-containing protein n=1 Tax=... [more]
A0A835ZNY4_9STRA2.110e-4530.37Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z745_9STRA1.600e-4133.24Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z0A5_9STRA7.230e-4031.64Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZJK4_9STRA6.670e-3056.19Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CEQ0_9STRA6.880e-2956.31Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZFK4_9STRA4.840e-2750.43Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z813_9STRA9.540e-2449.29Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YJ14_9STRA1.440e-1668.18Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_48contigContig_48:2646..8837 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|349740|estExt_Genemark1.C_Ctg_480001
Max annot lvl35493|Streptophyta
EggNOG OGs28P4T@1|root,2QS14@2759|Eukaryota,37MZH@33090|Viridiplantae,3GDVV@35493|Streptophyta
Evalue5.92e-06
Seed ortholog88036.EFJ23060
Hectar predicted targeting categoryother localisation
TranscriptId350062
TrackFilteredModels1
ProteinId349740
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349740gene_12570Tribonema minus UTEX_B_3156 geneContig_48 2646..8837 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349740Trimin1|349740|estExt_Genemark1.C_Ctg_480001Tribonema minus UTEX_B_3156 polypeptideContig_48 2879..8837 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_12570_7exon_12570_7Tribonema minus UTEX_B_3156 exonContig_48 2646..2979 -
exon_12570_6exon_12570_6Tribonema minus UTEX_B_3156 exonContig_48 3672..3898 -
exon_12570_5exon_12570_5Tribonema minus UTEX_B_3156 exonContig_48 5155..5292 -
exon_12570_4exon_12570_4Tribonema minus UTEX_B_3156 exonContig_48 6538..6618 -
exon_12570_3exon_12570_3Tribonema minus UTEX_B_3156 exonContig_48 6959..7032 -
exon_12570_2exon_12570_2Tribonema minus UTEX_B_3156 exonContig_48 7777..7821 -
exon_12570_1exon_12570_1Tribonema minus UTEX_B_3156 exonContig_48 8796..8837 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_12570UTR3_12570Tribonema minus UTEX_B_3156 three_prime_UTRContig_48 2646..2878 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_12570CDS_12570Tribonema minus UTEX_B_3156 CDSContig_48 8796..8837 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_12570 ID=mRNA_12570|Name=jgi.p|Trimin1|349740|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=941bp|location=Sequence derived from alignment at Contig_48:2646..8837- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGAGGTGCAAGTACACGGCATCCCCAGGCGCCAGCGAGATGGGCGAATC
GTTGATCACCTGCTGCGCCAAGGCGGCGTTCGACATAGATTGCAGGCAGC
AGCGGTTCCTGCTATGGACGCGCAATATGGTGGACTATGACGCTGGACAC
AGCCACACCAGCTTTGCTTACCACTGTGCCTTCTGGGAGGCGTACAGCCT
GAATAGGACGCTGGTGTTGGACAGCTTTGCGGGCATGGGACGAGAATGGG
ACATTGCGGCGGCACTCAAGCCTGCCTACCGCTTTGGCTTCCAGGTTTGC
CACCCTAAAAAACGGAAAGTGGAGAAGAACACTTTCCACGAGCCAGCAGA
CCTCAACTTCACCATGCCAAAAGAATACCGATATCCCACCTTGGATTATG
ACACATCACCAGATGGCATACACAAGACGATAGAGCCCTATGTGCCCCAT
GGGTCTACCCTGTACATTGCCACCAACGAGCGGGACCCGGTCACCTTTTT
CAAGCCACTGGAGCAGTACTACACTGTGCTGTCACTGGCGCACTTTCCCG
AGTTTCTGCACTTTGAGAACTTCCTGCCATCGACACTGGCCCTTATTGAC
TATGCAGTACTGGTGAGCACTGCCTGCGACATGAGCATACCTACCTTTGC
GTCGGAGCTGTCAAGGGGGTTTCCAGAGTATATCAGCCTTTCTCAACTCC
TCAAATGAGCGTGGCCGCCATCACGCTAGACAATCTGAGCCACAGCAGAG
GTGGTGTATACTTTAGTTGCGCAGGTTGAAGGACTGTGCTCGTGAAGGCA
TGCATTGAAGCAGCACATGTATACATTGACCGTCTCGTGGTACCAGTGCC
CTGCGCAGACTTTGACAATGAGCAGCGTACAGCCGCGGCCTGGCCGATTG
CCAGAGGTTATTAGTGCATGCACAAGTGGCCCTTTGTGGCA
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protein sequence of jgi.p|Trimin1|349740

>Trimin1|349740|estExt_Genemark1.C_Ctg_480001 ID=Trimin1|349740|estExt_Genemark1.C_Ctg_480001|Name=jgi.p|Trimin1|349740|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=236bp
MRCKYTASPGASEMGESLITCCAKAAFDIDCRQQRFLLWTRNMVDYDAGH
SHTSFAYHCAFWEAYSLNRTLVLDSFAGMGREWDIAAALKPAYRFGFQVC
HPKKRKVEKNTFHEPADLNFTMPKEYRYPTLDYDTSPDGIHKTIEPYVPH
GSTLYIATNERDPVTFFKPLEQYYTVLSLAHFPEFLHFENFLPSTLALID
YAVLVSTACDMSIPTFASELSRGFPEYISLSQLLK*
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mRNA from alignment at Contig_48:2646..8837-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_12570 ID=mRNA_12570|Name=jgi.p|Trimin1|349740|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6192bp|location=Sequence derived from alignment at Contig_48:2646..8837- (Tribonema minus UTEX_B_3156 )
ATGAGGTGCAAGTACACGGCATCCCCAGGCGCCAGCGAGATGGTGCGTGG
AATTGCCTCTATAGCCTCATACGTGCTGATAGAGTTGGATGCAGTTGTCA
GCGCTGCATTGCCGACAGCCTCAGCAATGTCATAGATGGCTCTAGCACAG
CATTGCACTGCTGCGCTGTCTTGCAGCCCACTGCAAGGGTCGGGATCAGC
TGGAGGGCCTGATCTCCCTTGCTGTGGCAGTGCCAGTAGCAGCAACAGCA
GTAGCAGCTGCTGGCGTTGAAATCGTTTCCTGCGATGTCGCACTATCATG
GGAGACTGTTGCTGCTGAAGTGGGATCTTCTATCGCCTGTGAAGAACAGG
ATCGAGAGGTATATGGAAGTTCATGGTCGGTAGGTTTGCACAAAGCAAAT
TGACTTGCATGCAGCGAAACACTGGCAGCGTTGCACGAGTTGATAATGAG
TTTGGACCAGCTCATGCATTGGAACGGCACATAGGGATCGTGACCACATT
GTTGCGCAACAAATTTCAACAATGTACAAAGTACCTACCTTTGCAGCAAG
ACACCACCGCGCTGCCGCCGTGCCGCCCGCACCGGAGATCTCGCAATGAT
TGAATAGCACTTAGTGTACTGAGTGTCGCCTTTGAGGCGTCGTTGTGTTG
CTCTCATTGCTCTTGAACTTCAATCAGCGCCTGACCGAACTCAACGGGGT
TCCGCCAGGAAGTTGAAGTTGCTAAGTTTGGCCAGGGAGAACCAGCGCCA
GCGTGCAGCACCGGCTCGCAAGGGCGGCACATATATCTCATTACCTCCAC
TAGTAACGTCCAGCAGCAATACCGCAGGTCGCCCACCGACGCGTTCATTT
CGATTCGCAGGCAAACATGACAGGAGCACGAACACGCAGCCTGCCTCTGC
TGGCGCTACTACTAGCGGTAGGGGTATTACGCTTGAGAGCGGGCTCAGGA
GAGCCGGAATTGGCGAGCCATCTGGACACCGATGTGTATGAGCCAGGCCC
GTGCGGCGGCCTCCAGGGCGAATCGTTGATCACCTGCTGCGCCAAGGCGG
CGTTCGACATAGTACGACACACCGAAACAGCAATTTTGTGGATTGCTGCA
AAGCAGACGGAGCCGGGGGACGCGGAGTTCGCTCGCATGACAGCTGACTG
CATGCGAAGGAAGCGACATTTGGCGAGCAACACGGATTGTGCAGCTGTGA
AGTTCCAATACCGCAGGCACAAATACCAGGACTACTACTGCACAAATGCT
CCGTTTACGGACGACAAGTACCTGCTCGAGACTGGTATGCTGCCAGGGCT
ATCAACATCATCACAACTAGAGGTGAGATTTGTGATTGAACGTGAACCAT
GGCGAGTTTGTTGGCTTGGCTTGTACGATGGTTGCTGCTGAAGCACTCTT
GCGACGCGGTGACACTTTTGCGGGAGTCGTTGGCTTATGTTTGATTCATT
CTTGGCTCATTTGCTTGCTTTGAGGGCTGGCAGTCCCTGCACAGCGCCTC
ATATATGCAATCACGGCTATCATTTTCTGTTGGCATCAAGGTCCTGCTGT
GCCGCCGCAACCCACTTGTCAGACAACACATCCTTCACATGCACTGATGT
GGCCGCAGTGGCCTCTTAATGCTGCTTGCTGATGAATTAGTGCTCAAACG
TCCCAGGTTATCCTGCTAATGCAACACACCTATTCTCTGCCATTTTACAC
ACATCCCAGCCAGTGAGCGCCAGTAGGTGAGGGTGGTGACAAGCAGCAGC
AGTTGCCACTGCTTGAATAACTTCATTCATAGTTACCGTCATACCTCTGC
TGCAGGATTGCAGGCAGCAGCGGTTCCTGCTATGGACGCGCAATATGGTG
GACTATGACGCTGGACACAGCCACACCAGGTGATGTGCCCCTGCTTCAAC
CGATTCCAGTGCTCCCCTCTGTGAGATGTCAGTTAATCTACTTGGCGCAT
TCTGGCCCGAGGTTAAAAAAGTTCGGCGATGTTATGCTTTGAAGCTTGTG
TGAAGGTGATGAAGGTGATGGGACATTTATGATTTTGACGTGATGCTGTG
AACGAGGTGAACGAGAGGTGGTGATGCTGTAAACCGAGTGCAGTGCACAG
GCATGCAATGATGTGGTTGTGTGAAGTGGTTGTTGATGTTTTTGAAGTGA
CAGCTCAAAGCAACAGTGCTTAACGTTTGTTGTTCGCTGCATTGAAATTT
GTCGCTTGCTCCTTTGCAGCTTTGCTTACCACTGTGCCTTCTGGGAGGCG
TACAGCCTGAATAGGACGCTGGTGTTGGACAGCTTTGCGGGCATGGGACG
GTCAGTGCAATAACTTGAAGTGATGCAATTGAAGTAATGGTAAAGGTTTG
ATGTCATTGCTGCAAACGTCGAGGTGGATGCACATGATTGAGAGGCAAGC
AGTATATATGGGCCCGGTGCAGATGCGTGCTTCATGTGGGTGTAAATGGC
AGTGCTGGTAAGGCATACAGTCCATTTGCCTGCGGTCAGCAGCCACTCGC
ATCTTCCTGCTGATGCTGCTGTGTGTTTGTGCGTGCATAGGAGCCCTAAC
AAGTGACTGCCGTCAGCATCATCATCATTGTGCGTGTGCTTGCGTCACGC
GAGGCATGCATCACGAAGGCATACATGGCTTTTTCAATCGGCCTCAATTT
CACATGTCACAATCGCCCATGCGCAGAATTCATTCCGGCGGAGACTACAA
TGCAGAGGTGCCATATACAGCATGGTATGGCACGGGGGGGTTAACAAAGC
TACCGGAAGGGGGGATGCTGTACCACGAGTTTGTCAAAGGCTGTGGAGCT
CCAGGCCTGATGCAAGAGGTGTGTTTGTGTGCGTGTGGCAATACATGCAA
GTCAATTTGCATGCACCTCTGTAGCGCGTTGCGCAGTGACTGAACTGAGC
TGCGTGACATAAAAACATCATCAATTGTTGAATGATATTGGCAGGGCGGT
GGTGTGCAGCAACGTCCGTCATCCACTGACAATCGACTTGACCACCCTCT
GCACATTATACGTTGTACCACATTGCACTCTCACATTCATCCTCTCATTC
CTGCAAGATACCGCTTGAAGATGGCACTTTGCTGCAGAGCTACTACCGGC
TGGACCAAGGAGGGACACATCAATCAGCCTTTCACTACTTGTGTTTGATG
AGGATCATCCACACTCCTCAATATGTTAAGCTCGTGGCTCAATCGGCTAC
AGCAGCAGCCACTGCATCTTCTACTTTAGGCCATAGCTGTACGCAAACGT
TACCAACGGCTTTCAGCTGACCATGGCCCCGCGGACATGCCCACGAGTCA
GCGCTCAGGTATCATTTGCTCTCCGCAACCGTACGTGCGTGCTCAAACAC
GACAATTGAGAGCCATGTGCTCCATACATGCAGCGCAAAGTGGTTGAGGG
TGTTGTTTTCTCACACCTGTACTGATGCTGCCTGTTTGTCTATTCTCATT
GGGCGACTGCAGGCCAATGGAGACCTGGCAATCATGCCCTCTGGCTCAAC
TCACCGGCAGATGGTCGCCAAATCCCATGTGCCCCTTCTCGTGAGAGAAT
GGGACATTGCGGCGGCACTCAAGCCTGCCTACCGCTTTGGCTTCCAGGTT
TGCCACCCTAAAAAACGGAAAGTGGAGAAGAACACTTTCCACGAGCCAGC
AGACCTCAACTTCACCATGCCAAAAGAATACCGGTAAGCGCGAGAGTTGA
CACCCTGGGGTGCTCCTGCTGCCTTGGAGTAGGCGATGTATGCGTGACCA
GACATTCGATGGTTGCTGTGCCAGCAACACGAATGCTGCTGAGACGGGCC
GTTATACATGATGCATGCATTGCTGCTACTGAGGCTTGTGTTGCACATTG
ATTCACTCTAGCAGCAAGGGTTCTTACGCGATTGCATGACGGGTGGTGCA
TGCCTGCAGGATATACCGAGGCCACTTGTGACAACACTGAGTCAGCAATG
GCTGGTTTGCAGTTGTTCAACTCATGTATTGTTTGCTGTGAGAGTTCATG
CCCAAGATCACAGTCATCTCGAATAGTTCGAGCGCTTGAACTGAGCTGAG
TGCACTCAGGCACATCGGACATGCAGCCAACATGCACCAACAAAGGCGCA
TGTGGCAATGAGTTGTACGCCGAGTACTTTACATCTTTACTGTGGGTTCT
TTGCTCTGGCTGGCCACTCACCTGCGTTCAATGCGTATTTTTCCGCAATA
CTGTTGGTAACAGGGGCAAGCCATACGCTGACTGGGTGTACCAGACAGCG
GGGGCAATCCAAGGCGGCATGTGGCAAGTTACTCCAGAGGGGAACTACGC
AGTGTGCTTGCATGTGCGGAGAGGCGACAAAGTCCGGCTTGAATCGCAAA
TCAAGAAGTGAGTGGCATGAAATGCTGTGTTGAGCACGTTTGCTGCACTC
AAGGACACAAGCGTCGTCATGAACTAGGTCTGTACTTGCGCCTCTGACTC
GCAAGCCACTGCGTCTTGGTCTGCACCACGTTTATCCCCCTGCACCACGT
GAACTGTCTTGTCGATAATTAAGGCCCCGGGACGATATTTTGGTATGTTT
TTACTGCAGCACCAATAAGATGCACGCCCGCCCCCCTCTTGCGCCAAGAT
CGAAATAGCGTCCCGGGGCCTTGATTATCGACAAGACGGTTTATGCTGAC
GCGTATGAGCCATGTGACCGGCAGGCCGTGGACTGCGGAGATTGTATTGA
AAATCGCTGAGGGAGCGCTTGTGACAGCCTGGTGCTTGCTGTGTGTCAGG
GGCACGTTGTACCACTAGCATACCAGCGCAACAATGACGCATGTACAAGA
GTACTACGTATCTCAATGCTCAATGCGCCATAGGCTCTTGGTGCCCTTGT
ACTATCCCTTTTTTTGTCCCCGCTACCAGCAGTGCTGACCAACTTCGCAT
GCTGAACGGGGTTGCTGCCCCTGCCTTCTTTTGATGCAGATATCCCACCT
TGGATTATGACACATCACCAGATGGCATACACAAGACGATAGAGCCCTAT
GTGCCCCATGGGTCTACCCTGTACATTGCCACCAACGAGCGGGACCCGGT
CACCTTTTTCAAGCCACTGGAGCAGTACTACACTGTGCTGTCACTGGCGC
ACTTTCCCGAGTTTCTGCACTTTGAGAACTTCCTGCCATCGACACTGGCC
CTTATTGACTATGCAGGTGGGTGATCAGAATTGCAGTGAGGTTTTACCTA
ACCCACACCCAAACTCTAATCTAACCCAAGTAAAACAGCTCTGCATGTCA
TCACTGACTGCAAGTTGCTTGTCGCTGTTGTTTGTACTGCAGCACTTGCA
TGCTTGTACTGAACATGCACAGTCAGGGCCGCAGTTGCTAACCCTTGTTT
GGCAACAAAGTGCTGAACTTTGCCTCGTTGCTCATGCAAGCTGCTGCTGT
AGCCTGGACTCGCCCTTACTCTTTTGAATTTGCGGTCTAAATGGCTGTGC
TGCCCATGGTTGCAGCCAATCTGGTGTAGAGTCTGCAGCCTTCTGCGGTT
TTTGCATATTGCATACCTACACAGCAAACCTGTTTGCTTCGTCTCCTATG
CAGTGAGGGGGTACCATCATGTTCTCACACATGCAAGCCCCTCGCAAGTG
GGGTCCATTGCTTAGTATGTGGAGGAGAGCAAGGCGTAGCGTTAGGTCTT
GCTTGCTTTGAAGAAAGACACTGTCTATAACTTGCTGGTGCTGGTGCCTT
GTGGATACGATATAGTGACCCATTATGCAGCGTGCTGCATGAACTGATTG
AATACACCGTGTGGCTCAAGTTTGTGGCTTACATGGACTGTCATGCCGCA
ACACCAGAACACTGCACTGACAGTTGGTTCTCATTTCTCTGTCCTTCTGC
ACCCTCAGTACTGGTGAGCACTGCCTGCGACATGAGCATACCTACCTTTG
CGTCGGAGCTGTCAAGGGGGTTTCCAGAGTATATCAGCCTTTCTCAACTC
CTCAAATGAGCGTGGCCGCCATCACGCTAGACAATCTGAGCCACAGCAGA
GGTGGTGTATACTTTAGTTGCGCAGGTTGAAGGACTGTGCTCGTGAAGGC
ATGCATTGAAGCAGCACATGTATACATTGACCGTCTCGTGGTACCAGTGC
CCTGCGCAGACTTTGACAATGAGCAGCGTACAGCCGCGGCCTGGCCGATT
GCCAGAGGTTATTAGTGCATGCACAAGTGGCCCTTTGTGGCA
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Coding sequence (CDS) from alignment at Contig_48:2646..8837-

>mRNA_12570 ID=mRNA_12570|Name=jgi.p|Trimin1|349740|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=708bp|location=Sequence derived from alignment at Contig_48:2646..8837- (Tribonema minus UTEX_B_3156 )
ATGAGGTGCAAGTACACGGCATCCCCAGGCGCCAGCGAGATGGGCGAATC
GTTGATCACCTGCTGCGCCAAGGCGGCGTTCGACATAGATTGCAGGCAGC
AGCGGTTCCTGCTATGGACGCGCAATATGGTGGACTATGACGCTGGACAC
AGCCACACCAGCTTTGCTTACCACTGTGCCTTCTGGGAGGCGTACAGCCT
GAATAGGACGCTGGTGTTGGACAGCTTTGCGGGCATGGGACGAGAATGGG
ACATTGCGGCGGCACTCAAGCCTGCCTACCGCTTTGGCTTCCAGGTTTGC
CACCCTAAAAAACGGAAAGTGGAGAAGAACACTTTCCACGAGCCAGCAGA
CCTCAACTTCACCATGCCAAAAGAATACCGATATCCCACCTTGGATTATG
ACACATCACCAGATGGCATACACAAGACGATAGAGCCCTATGTGCCCCAT
GGGTCTACCCTGTACATTGCCACCAACGAGCGGGACCCGGTCACCTTTTT
CAAGCCACTGGAGCAGTACTACACTGTGCTGTCACTGGCGCACTTTCCCG
AGTTTCTGCACTTTGAGAACTTCCTGCCATCGACACTGGCCCTTATTGAC
TATGCAGTACTGGTGAGCACTGCCTGCGACATGAGCATACCTACCTTTGC
GTCGGAGCTGTCAAGGGGGTTTCCAGAGTATATCAGCCTTTCTCAACTCC
TCAAATGA
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