Trimin1|167047|e_gw1.48.18.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|167047
Unique NameTrimin1|167047|e_gw1.48.18.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length184
Homology
BLAST of jgi.p|Trimin1|167047 vs. uniprot
Match: A0A835Z0N7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0N7_9STRA)

HSP 1 Score: 385 bits (988), Expect = 1.520e-135
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0
Query:    1 MPFYQNVFTCKWRTPPEQLTRLYRRLCNTVLEDGGMVRCVENHGVKDLAYRFRARTAMSGSENRYHTRGRWVSMYFDARPETLDKIDADLKMQDFYLRSNTIKPVVKMNWISTRHKTNPWERDATDPLPFYMVPSNSLAYRPGEAPSAAAYADSVTDASGFRHAGYVRMASEYQDREKVEVRC 183
            MPFYQNVFTCKWRTPPEQLTRLYRRLCNTVLEDGGMVRCVENHGVKDLAYRFRARTAMSGSENRYHTRGRWVSMYFDARPETLDKIDADLKMQDFYLRSNTIKPVVKMNWISTRHKTNPWERDATDPLPFYMVPSNSLAYRPGEAPSAAAYADSVTDASGFRHAGYVRMASEYQDREKVEVRC
Sbjct:    1 MPFYQNVFTCKWRTPPEQLTRLYRRLCNTVLEDGGMVRCVENHGVKDLAYRFRARTAMSGSENRYHTRGRWVSMYFDARPETLDKIDADLKMQDFYLRSNTIKPVVKMNWISTRHKTNPWERDATDPLPFYMVPSNSLAYRPGEAPSAAAYADSVTDASGFRHAGYVRMASEYQDREKVEVRC 183          
BLAST of jgi.p|Trimin1|167047 vs. uniprot
Match: D8LLJ6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLJ6_ECTSI)

HSP 1 Score: 105 bits (261), Expect = 1.490e-25
Identity = 49/124 (39.52%), Postives = 78/124 (62.90%), Query Frame = 0
Query:    1 MPFYQNVFTCKWRTPPEQLTRLYRRLCNTVLEDGGMVRCVENHGVKDLAYRFRARTAMSGSENRYHTRGRWVSMYFDARPETLDKIDADLKMQDFYLRSNTIKPVVKMNWISTRH-KTNPWERD 123
            M FYQ + T + RT P  LT ++RR    +LE+GG+VR V NHGV+ L YRF ++  +   ++R+ + GRW S Y+DA P    K++  L  +D  +R +T +P  KM+ I++ H ++NPW+ +
Sbjct:    1 MVFYQQIVTLRPRTNPTDLTNIFRRAAAVILEEGGVVRSVANHGVRVLPYRFHSKHDIKEKDDRWFSSGRWASAYYDASPAVAKKMEEQLWAEDKVIRVSTRRPATKMDRIASTHERSNPWDME 124          
BLAST of jgi.p|Trimin1|167047 vs. uniprot
Match: A0A1E7FMF6_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FMF6_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 2.450e-20
Identity = 43/120 (35.83%), Postives = 78/120 (65.00%), Query Frame = 0
Query:    1 MPFYQNVFTCKWRTPPEQLTRLYRRLCNTVLEDGGMVRCVENHGVKDLAYRFRARTAMSGSENRYHTRGRWVSMYFDARPETLDKIDADLKMQDFYLRSNTIKPVVKMNWISTRHKTNPW 120
            M FY+ V + K  T  + LT L +++   V+E+GG+VR ++NHG++   +RF+A+     ++ RY+ +GR++S+Y+D+ P TL +++  L M D  LR   +K   K++WI+ +H+ NP+
Sbjct:    1 MVFYECVLSTKHTTHFKALTALMKQVSLKVVENGGIVRSIQNHGLRTFPHRFKAKYPDYLTQQRYYEQGRFISIYYDSNPTTLKQVETVLTMNDQVLRVTHLKSRSKLDWINYKHEKNPY 120          
BLAST of jgi.p|Trimin1|167047 vs. uniprot
Match: A0A7S2MDE9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MDE9_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 1.820e-19
Identity = 45/129 (34.88%), Postives = 71/129 (55.04%), Query Frame = 0
Query:    1 MPFYQNVFTCKWRTPPEQLTRLYRRLCNTVLEDGGMVRCVENHGVKDLAYRFRARTAMSGSENRYHTRGRWVSMYFDARPETLDKIDADLKMQDFYLRSNTIKPVVKMNWISTRHKTNPWERDATDPLP 129
            MP Y +V     R PP+++  +  R C  + + GG VR  ENHGV+DL YRFR+    +  E+RY  + R+ S+Y+DA   T   +D  L+M +  LRS T +P   ++ + ++ + N W   A   +P
Sbjct:   15 MPLYHSVIITLERMPPKEMLGMLHRTCFKIFDQGGWVRGCENHGVRDLPYRFRS--PFAPEEDRYQNKARFFSLYYDAPVATKADVDTSLRMNEMVLRSMTFRPKSVLDEVRSKKRGNVWNTMAGIEIP 141          
BLAST of jgi.p|Trimin1|167047 vs. uniprot
Match: A0A7S2IGM9_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IGM9_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 2.730e-19
Identity = 45/121 (37.19%), Postives = 78/121 (64.46%), Query Frame = 0
Query:    1 MPFYQNVFTCKWRTPPEQLTRLYRRLCNTVLEDGGMVRCVENHGVKDLAYRFRARTAMSGSENRYHTRGRWVSMYFDARPETLDKIDADLKMQDFYLRSNTIKPVVKMNWIS-TRHKTNPW 120
            M FY+ V T K   P   LT+L + + +TV+E+GG+VR V+NHG+++L +RF+A+       NRY+ +GR++S+++DA P  L K++ ++++ D  LR   +K   K+ +I+    K NP+
Sbjct:    1 MVFYECVLTAKNTAPFTSLTKLMKTISSTVVENGGIVRTVQNHGIRNLPHRFKAKYP-DKEGNRYYKKGRFISVWYDASPRVLAKVENEIRLDDQILRHTHLKARNKLWYINIASEKKNPY 120          
BLAST of jgi.p|Trimin1|167047 vs. uniprot
Match: A0A1Z5JK56_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JK56_FISSO)

HSP 1 Score: 89.0 bits (219), Expect = 2.790e-19
Identity = 45/120 (37.50%), Postives = 74/120 (61.67%), Query Frame = 0
Query:    1 MPFYQNVFTCKWRTPPEQLTRLYRRLCNTVLEDGGMVRCVENHGVKDLAYRFRARTAMSGSENRYHTRGRWVSMYFDARPETLDKIDADLKMQDFYLRSNTIKPVVKMNWISTRHKTNPW 120
            M FY+ V T K       LT L + + + ++E GG+VR V NHG++ L +RF+A T      NRY+++GR+ S+Y+DA P+T+ ++D  LKM +  LRS  ++    +++I+ R   NP+
Sbjct:    1 MVFYECVVTAKNTAHFHTLTNLVKLVSHEIVEGGGIVRAVHNHGIRTLPHRFKA-TYPDREGNRYYSKGRFFSIYYDANPDTMSQVDTILKMDEEVLRSTHLRARSTLDFINLREDRNPY 119          
BLAST of jgi.p|Trimin1|167047 vs. uniprot
Match: A0A448Z259_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z259_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 3.610e-17
Identity = 36/91 (39.56%), Postives = 62/91 (68.13%), Query Frame = 0
Query:   30 VLEDGGMVRCVENHGVKDLAYRFRARTAMSGSENRYHTRGRWVSMYFDARPETLDKIDADLKMQDFYLRSNTIKPVVKMNWISTRHKTNPW 120
            V+E+GG++R ++NHG++   +RF+A+     ++ RY+ +GR++S+Y+DA P TL K++  L M D  LR   +K   K++WI+ RH  NP+
Sbjct:    8 VVENGGIIRSIQNHGLRTFPHRFKAKYPDYLTQQRYYEQGRFISVYYDANPATLKKVENILNMNDQVLRVTHLKSRSKLDWINYRHDKNPY 98          
BLAST of jgi.p|Trimin1|167047 vs. uniprot
Match: A0A6T7JZ88_9STRA (Hypothetical protein n=2 Tax=Bacillariophyta TaxID=2836 RepID=A0A6T7JZ88_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 5.630e-17
Identity = 44/121 (36.36%), Postives = 73/121 (60.33%), Query Frame = 0
Query:    1 MPFYQNVFTCKWRTPPEQLTRLYRRLCNTVLEDGGMVRCVENHGVKDLAYRFRARTAMSGSENRYHTRGRWVSMYFDARPETLDKIDADLKMQDFYLRSNTIKPVVKMNWIS-TRHKTNPW 120
            M FY+ V T K   P   LT L + +   V+E GG+VR V+NHG++DL +RF+A+       NRY+ +GR++S+++DA P   +++ A L + +  LR+  +KP  K+ + +    K NP+
Sbjct:    1 MVFYECVLTAKNTAPFMNLTNLMKTVSLKVVERGGIVRSVQNHGIRDLPHRFKAKYP-DKEGNRYYKKGRFISVFYDASPHAREEVQAILDLDEEVLRNTHLKPRNKVTYANIVNEKKNPY 120          
BLAST of jgi.p|Trimin1|167047 vs. uniprot
Match: A0A6S8YXD6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8YXD6_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 1.030e-16
Identity = 43/121 (35.54%), Postives = 74/121 (61.16%), Query Frame = 0
Query:    1 MPFYQNVFTCKWRTPPEQLTRLYRRLCNTVLEDGGMVRCVENHGVKDLAYRFRARTAMSGSENRYHTRGRWVSMYFDARPETLDKIDADLKMQDFYLRSNTIKPVVKMNWIST-RHKTNPW 120
            M FY+ V T K       LT   + + + V+E GG+VR V+NHG+++L +RF+AR       NRY+  GR++S+++DA P TL++++ ++++ D  LR   +K   K+ +I+    K NP+
Sbjct:    1 MVFYECVLTAKNTASFASLTNTVKSISSIVVESGGIVRTVQNHGIRNLPHRFKARYP-DKEGNRYYKEGRFISVWYDASPRTLNQVENEIRLDDQILRYTHLKARNKLWYINNPNEKKNPY 120          
BLAST of jgi.p|Trimin1|167047 vs. uniprot
Match: A0A7S2V599_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V599_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 5.050e-16
Identity = 46/121 (38.02%), Postives = 65/121 (53.72%), Query Frame = 0
Query:    1 MPFYQNVFTCKWRTPPEQLTRLYRRLCNTVLEDGGMVRCVENHGVKDLAYRFRARTAMSGSENRYHTRGRWVSMYFDARPETLDKIDADLKMQDFYLRSNTIKPVVKMNWISTRHKTNPWE 121
            MP Y    T K     + L +  +     + ++GG+VR VENHG++ L YRFR+R A  G E RY   GR++S +FDA P TL ++D  L + +  LR   +KP   M   +   K N WE
Sbjct:    1 MPLYHQFLTMKPEAASKDLLKTLKACIQVIQKNGGVVRQVENHGIRTLPYRFRSRHASPG-EGRYFYFGRFISTFFDASPTTLKELDDILGLDENMLRRTNLKPKSLME-AARASKHNLWE 119          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|167047 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
A0A835Z0N7_9STRA1.520e-135100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LLJ6_ECTSI1.490e-2539.52Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A1E7FMF6_9STRA2.450e-2035.83Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A7S2MDE9_9STRA1.820e-1934.88Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2IGM9_9STRA2.730e-1937.19Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A1Z5JK56_FISSO2.790e-1937.50Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A448Z259_9STRA3.610e-1739.56Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A6T7JZ88_9STRA5.630e-1736.36Hypothetical protein n=2 Tax=Bacillariophyta TaxID... [more]
A0A6S8YXD6_9STRA1.030e-1635.54Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2V599_9STRA5.050e-1638.02Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014717Translation elongation factor EF1B/ribosomal protein S6GENE3D3.30.70.60coord: 1..123
e-value: 7.7E-19
score: 69.6
IPR000529Ribosomal protein S6PFAMPF01250Ribosomal_S6coord: 4..103
e-value: 2.9E-13
score: 49.9
IPR035980Ribosomal protein S6 superfamilySUPERFAMILY54995Ribosomal protein S6coord: 1..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_48contigContig_48:621821..626028 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|167047mRNA_12621Tribonema minus UTEX_B_3156 mRNAContig_48 621821..626028 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|167047|e_gw1.48.18.1 ID=Trimin1|167047|e_gw1.48.18.1|Name=jgi.p|Trimin1|167047|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=184bp
MPFYQNVFTCKWRTPPEQLTRLYRRLCNTVLEDGGMVRCVENHGVKDLAY
RFRARTAMSGSENRYHTRGRWVSMYFDARPETLDKIDADLKMQDFYLRSN
TIKPVVKMNWISTRHKTNPWERDATDPLPFYMVPSNSLAYRPGEAPSAAA
YADSVTDASGFRHAGYVRMASEYQDREKVEVRC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014717Transl_elong_EF1B/ribosomal_S6
IPR000529Ribosomal_S6
IPR035980Ribosomal_S6_sf