Trimin1|349734|estExt_Genemark1.C_Ctg_470115 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|349734
Unique NameTrimin1|349734|estExt_Genemark1.C_Ctg_470115
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length444
Homology
BLAST of jgi.p|Trimin1|349734 vs. uniprot
Match: A0A836CC67_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC67_9STRA)

HSP 1 Score: 448 bits (1152), Expect = 3.680e-152
Identity = 443/443 (100.00%), Postives = 443/443 (100.00%), Query Frame = 0
Query:    1 MKHWLLAIIATTLLLANEANGFITPAGGGLSTRPSCRLNVASQSAEKYQSMRASEIKAELDSMGVRYDDCFEKSELVARLAEAKANPAAAXXXXXXXXXXXXXXXXXXXXAAGGRAGSIGEIQSMRMSEIKKELEERGVDYSGLLEKSEFVARLADARARNGTKPQQQRSTAXXXXXXXXXXXXXXXXXXXXGRPKDPNEYDPSYRDVKVQRMKKPEPQQPSGGAPQQPPFGXXXXXXXXXXXTGAGAGSSXXXXXXXXXXXXXXXXXXXXXXXLGSLLGGLSGXXXXXXLXXXXXXXXXXGPAPGRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAGGARSGGMGGVGDMLSKVMGNPKAMAALQXXXXXXXXXXXXXXXXXXXSAIGKYARDPDIMTVIQEIRSIL 443
            MKHWLLAIIATTLLLANEANGFITPAGGGLSTRPSCRLNVASQSAEKYQSMRASEIKAELDSMGVRYDDCFEKSELVARLAEAKANPAAAXXXXXXXXXXXXXXXXXXXXAAGGRAGSIGEIQSMRMSEIKKELEERGVDYSGLLEKSEFVARLADARARNGTKPQQQRSTAXXXXXXXXXXXXXXXXXXXXGRPKDPNEYDPSYRDVKVQRMKKPEPQQPSGGAPQQPPFGXXXXXXXXXXXTGAGAGSSXXXXXXXXXXXXXXXXXXXXXXXLGSLLGGLSGXXXXXXLXXXXXXXXXXGPAPGRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAGGARSGGMGGVGDMLSKVMGNPKAMAALQXXXXXXXXXXXXXXXXXXXSAIGKYARDPDIMTVIQEIRSIL
Sbjct:    1 MKHWLLAIIATTLLLANEANGFITPAGGGLSTRPSCRLNVASQSAEKYQSMRASEIKAELDSMGVRYDDCFEKSELVARLAEAKANPAAAXXXXXXXXXXXXXXXXXXXXAAGGRAGSIGEIQSMRMSEIKKELEERGVDYSGLLEKSEFVARLADARARNGTKPQQQRSTAXXXXXXXXXXXXXXXXXXXXGRPKDPNEYDPSYRDVKVQRMKKPEPQQPSGGAPQQPPFGXXXXXXXXXXXTGAGAGSSXXXXXXXXXXXXXXXXXXXXXXXLGSLLGGLSGXXXXXXLXXXXXXXXXXGPAPGRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAGGARSGGMGGVGDMLSKVMGNPKAMAALQXXXXXXXXXXXXXXXXXXXSAIGKYARDPDIMTVIQEIRSIL 443          
BLAST of jgi.p|Trimin1|349734 vs. uniprot
Match: D7G5D2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5D2_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 1.680e-9
Identity = 49/115 (42.61%), Postives = 61/115 (53.04%), Query Frame = 0
Query:   51 MRASEIKAELDSMGVRYDDCFEKSELVARLAEAKANPAAAXXXXXXXXXXXXXXXXXXXXAAGGRAGSIGEIQSMRMSEIKKELEERGVDYSGLLEKSEFVARLADARARNGTKP 165
            M A +IKAELD++GV Y    EKSE V +LAEA+      X                   A+     +  E  +M +S IK+EL+ERGV Y GL EKSEFV  L DARA+  T P
Sbjct:  272 MTAGQIKAELDALGVSYVSLLEKSEFVMKLAEAEDEKKEKXEEA----------------ASPAGEDAADEASAMLVSAIKEELDERGVRYRGLFEKSEFVDLLVDARAKGITAP 370          
BLAST of jgi.p|Trimin1|349734 vs. uniprot
Match: D7G4D5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D5_ECTSI)

HSP 1 Score: 68.2 bits (165), Expect = 1.760e-8
Identity = 60/139 (43.17%), Postives = 71/139 (51.08%), Query Frame = 0
Query:   51 MRASEIKAELDSMGVRYDDCFEKSELVARLAEAKANPAAAXXXXXXXXXXXXXXXXXXXXA------------------------AGGRAGSIGEIQSMRMSEIKKELEERGVDYSGLLEKSEFVARLADARARNGTKP 165
            M A +IKAELD++GV Y    EKSE V +LAEA+ +                XXXXXXXX                         AG  A    E+ +MR+S IKKEL+ERGV Y GL EKSEFV  L DARA+  T P
Sbjct:  537 MTAGQIKAELDALGVGYVGLLEKSEFVMKLAEARVDGGGKAALEGESSDAVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGEDAAD--EVSAMRVSAIKKELDERGVGYRGLFEKSEFVDLLVDARAKGITAP 673          
BLAST of jgi.p|Trimin1|349734 vs. uniprot
Match: A0A7R9ZLA2_9STRA (Hypothetical protein n=2 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZLA2_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 9.290e-7
Identity = 56/152 (36.84%), Postives = 76/152 (50.00%), Query Frame = 0
Query:   32 TRPSCRLNVASQSAEKYQSMRASEIKAELDSMGVRYDDCFEKSELVARLAEAKAN---PAAAXXXXXXXXXXXXXXXXXXXXAAGGRAGSIGEIQ---------SMRMSEIKKELEERGVDYSGLLEKSEFVARLADARARNGTKPQQQRST 171
            +R + RL  +S S  +  +MRA EIK EL+S GV      EKSELV+ L +A+++   P AA             XX           G   EI+         +M+ SE+KKELEERGV      EKSEFV  LA+AR  +G + + +  T
Sbjct:   56 SRQTSRL-FSSTSLPEISAMRAGEIKKELESYGVSTKAFLEKSELVSALKKARSDGMTPKAAASTASTTADAGTSXXSGTAAKQENDDGRPREIRLQEEMDKCKAMKASELKKELEERGVSTKTFFEKSEFVKALAEARV-DGVQKKDEEET 205          
BLAST of jgi.p|Trimin1|349734 vs. uniprot
Match: A0A1Z5KBL5_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KBL5_FISSO)

HSP 1 Score: 61.2 bits (147), Expect = 1.250e-6
Identity = 74/182 (40.66%), Postives = 100/182 (54.95%), Query Frame = 0
Query:    1 MKHWLLAIIATTLLLANEANGFITPAGGGLSTRPSCRLNVASQSAEK------YQSMRASEIKAELDSMGVRYDDCFEKSELVARLAEAKAN---PAAAXXXXXXXXXXXXXXXXXXXXAAGGRAGS------IGEIQSMRMSEIKKELEERGVDYSGLLEKSEFVARLADARARNGTKPQQ 167
            ++ WLL    T  LLA+  + F+          P+      S +A+K       ++MRA EIK EL+S G+      EKSELV  L +A+A    P  +   XXXXXXXXXXXXXXXXX   G+  S      + ++QSM+ SE+KKELEE GV      EK EF+  LA+AR  +G K ++
Sbjct:    8 LRRWLLTY--TGFLLASSVHAFVPHRP----VMPAFAWQHHSMTADKATDLPMIETMRAGEIKKELESYGISTVSFLEKSELVNALTKARAEGLTPKVSSASXXXXXXXXXXXXXXXXXXXXGKPRSERIREEMEKLQSMKASEMKKELEELGVSTKSFFEKQEFMKALAEARV-DGVKNEE 182          
BLAST of jgi.p|Trimin1|349734 vs. uniprot
Match: A0A7S3SC83_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SC83_EMIHU)

HSP 1 Score: 59.7 bits (143), Expect = 1.410e-6
Identity = 58/120 (48.33%), Postives = 76/120 (63.33%), Query Frame = 0
Query:   40 VASQSAEKYQSMRASEIKAELDSMGVRYDD-CFEKSELVARLAEAKANPAAAXXXXXXXXXXXXXXXXXXXXAAGGRAGSIGEIQSMRMSEIKKELEERGVDYSGLLEKSEFVARLADAR 158
            ++S+ A   + M+  EIK ELDS GV +   CFE++ELVA L +A++ PA A  XXXXXXXXXXXX      AA G A     I +M +  I++EL+ RGV  +G  EK+EFVA L  AR
Sbjct:   58 LSSEVAMPPEEMKLKEIKEELDSRGVTWRGVCFERTELVAALTQARSMPAPAAPXXXXXXXXXXXXSATP--AAEGDA-----IGAMSLKAIREELQRRGVTTTGFFEKAEFVAALRLAR 170          
BLAST of jgi.p|Trimin1|349734 vs. uniprot
Match: A0A7S0DDV7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DDV7_9EUKA)

HSP 1 Score: 60.8 bits (146), Expect = 1.610e-6
Identity = 47/141 (33.33%), Postives = 58/141 (41.13%), Query Frame = 0
Query:   51 MRASEIKAELDSMGVRYDDCFEKSELVARLAEAKANPAAAXXXXXXXXXXXXXXXXXXXXAAGGRAGSIG------------------------------EIQSMRMSEIKKELEERGVDYSGLLEKSEFVARLADARARN 161
            MR SEI+ ELD  GVRY D  EK E V RL +A+                           +G  A S G                              ++  M++ EIK EL+ERGVDY GLLEKSE+V  L  A+  N
Sbjct:  109 MRVSEIRKELDDFGVRYKDLLEKKEYVERLYQARTG---TIDPQYKTKPGEASGPTSSTAQSGFSASSKGXXXXXXXXXXXXXXXXXXXXXKITKEEAKEQVSKMKIKEIKAELDERGVDYKGLLEKSEYVNLLVQAKVDN 246          
BLAST of jgi.p|Trimin1|349734 vs. uniprot
Match: A0A0M0JM96_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JM96_9EUKA)

HSP 1 Score: 59.7 bits (143), Expect = 2.990e-6
Identity = 59/122 (48.36%), Postives = 75/122 (61.48%), Query Frame = 0
Query:   50 SMRASEIKAELDSMGVRYDD-CFEKSELVARLAEAKANPAAAXXXXXXXXXXXXXXXXXXXX-----AAGGRAGSIGEIQSMRMSEIKKELEERGVDYSGLLEKSEFVARLADARARNGTKP 165
            SMR  E+K ELD  GV +    FEK EL   L +A++ P A+   XXXXXXXXXXXXXXXX      AA     S+G +++M++++IK EL+  GVD S L EK+E VA L  ARA     P
Sbjct:   10 SMRLKELKDELDKRGVTWRGIAFEKEELARLLVDARSRPPASSAPXXXXXXXXXXXXXXXXAKAAQDAAWASRSSMGNVETMKVADIKAELKSLGVDTSALFEKTELVAALIKARASKPPTP 131          
BLAST of jgi.p|Trimin1|349734 vs. uniprot
Match: A0A7S2RC63_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RC63_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 3.750e-6
Identity = 44/121 (36.36%), Postives = 56/121 (46.28%), Query Frame = 0
Query:   42 SQSAEKYQSMRASEIKAELDSMGVRYDDCFEKSELVARLAEAK-ANPAAAXXXXXXXXXXXXXXXXXXXXAAGGRAGSIGEIQSMRMSEIKKELEERGVDYSGLLEKSEFVARLADARARN 161
            S SA    SM A EIK EL  +G   +  F+K  L A L  A+ A P                        +      +  I+ MR+ EIKKEL+ RGV  + LLEK EFV  LA+AR R+
Sbjct:   42 SASASDATSMSAREIKQELKDLGYPTEGLFDKESLAAALQRAREAGPRGPAERAAAPPPNPAPAESSDSGLS--MEAEVDAIKGMRLGEIKKELQTRGVSTASLLEKGEFVTALAEARIRD 160          
BLAST of jgi.p|Trimin1|349734 vs. uniprot
Match: A0A6H5KUZ2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUZ2_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 4.370e-5
Identity = 29/45 (64.44%), Postives = 34/45 (75.56%), Query Frame = 0
Query:  121 EIQSMRMSEIKKELEERGVDYSGLLEKSEFVARLADARARNGTKP 165
            E+ +MR+S IKKEL+ERGV Y GL EKSEFV  L DARA+  T P
Sbjct:  692 EVSAMRISAIKKELDERGVGYRGLFEKSEFVDLLVDARAKGITAP 736          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349734 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A836CC67_9STRA3.680e-152100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G5D2_ECTSI1.680e-942.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G4D5_ECTSI1.760e-843.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7R9ZLA2_9STRA9.290e-736.84Hypothetical protein n=2 Tax=Craspedostauros austr... [more]
A0A1Z5KBL5_FISSO1.250e-640.66Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S3SC83_EMIHU1.410e-648.33Hypothetical protein (Fragment) n=1 Tax=Emiliania ... [more]
A0A7S0DDV7_9EUKA1.610e-633.33Hypothetical protein (Fragment) n=1 Tax=Amorphochl... [more]
A0A0M0JM96_9EUKA2.990e-648.36Uncharacterized protein n=1 Tax=Chrysochromulina t... [more]
A0A7S2RC63_9STRA3.750e-636.36Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A6H5KUZ2_9PHAE4.370e-564.44Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003034SAP domainSMARTSM00513sap_9coord: 122..158
e-value: 0.044
score: 22.9
coord: 48..84
e-value: 10.0
score: 8.7
NoneNo IPR availableGENE3D1.10.260.100coord: 384..443
e-value: 1.2E-16
score: 62.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 296..387
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 161..186
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 315..343
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 199..214
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 156..270
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 90..105
IPR041243STI1 domainPFAMPF17830STI1coord: 385..437
e-value: 2.1E-7
score: 30.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_47contigContig_47:844384..847873 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349734mRNA_6296Tribonema minus UTEX_B_3156 mRNAContig_47 844384..848446 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|349734|estExt_Genemark1.C_Ctg_470115 ID=Trimin1|349734|estExt_Genemark1.C_Ctg_470115|Name=jgi.p|Trimin1|349734|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=444bp
MKHWLLAIIATTLLLANEANGFITPAGGGLSTRPSCRLNVASQSAEKYQS
MRASEIKAELDSMGVRYDDCFEKSELVARLAEAKANPAAAPKQSQKQTRT
EPATGAKTSAAAGGRAGSIGEIQSMRMSEIKKELEERGVDYSGLLEKSEF
VARLADARARNGTKPQQQRSTAQSSSTSSGAKPGSGGGSSSGGRPKDPNE
YDPSYRDVKVQRMKKPEPQQPSGGAPQQPPFGGAAPQQSPFGGTGAGAGS
SPFGGGMGGANPFGGAGGASGGFDLGSLLGGLSGLMGGGGLGGMGGMGSM
GGPAPGRPGPTAGRQTPNAGRQAPNAGRQAPNVGRQTPNAGRQAPNAGRP
ASGAGRPAQSAGRPAPNSGGGAGGARSGGMGGVGDMLSKVMGNPKAMAAL
QKAQSNPKVMAAVRDVMANPSAIGKYARDPDIMTVIQEIRSIL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003034SAP_dom
IPR041243STI1