Trimin1|349700|estExt_Genemark1.C_Ctg_470061 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|349700
Unique NameTrimin1|349700|estExt_Genemark1.C_Ctg_470061
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length238
Homology
BLAST of jgi.p|Trimin1|349700 vs. uniprot
Match: A0A835YS68_9STRA (Aquaporin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS68_9STRA)

HSP 1 Score: 457 bits (1175), Expect = 2.940e-162
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0
Query:    1 MVAGVWAAVVAAMVACLSHVCQAHFNPALSLATKLLTPDALSWRRLGRITLSQLLGAAIGAAATLIAFSPPLAAFETARGLVRGNFNSQRSASALAPFYPNPNAHTYFMLGIGAGYPGAARAFATEAVGAAALAFVWFSLRHPRNRGMAGDGALGVKALLFGLTMGGLMSVMAPITMAGLNPARDIAARLLCCAAGWGRYAFPTGGPFCSLMVYTVAPLLGALLGGSVAICLGDTQQ 237
            MVAGVWAAVVAAMVACLSHVCQAHFNPALSLATKLLTPDALSWRRLGRITLSQLLGAAIGAAATLIAFSPPLAAFETARGLVRGNFNSQRSASALAPFYPNPNAHTYFMLGIGAGYPGAARAFATEAVGAAALAFVWFSLRHPRNRGMAGDGALGVKALLFGLTMGGLMSVMAPITMAGLNPARDIAARLLCCAAGWGRYAFPTGGPFCSLMVYTVAPLLGALLGGSVAICLGDTQQ
Sbjct:    1 MVAGVWAAVVAAMVACLSHVCQAHFNPALSLATKLLTPDALSWRRLGRITLSQLLGAAIGAAATLIAFSPPLAAFETARGLVRGNFNSQRSASALAPFYPNPNAHTYFMLGIGAGYPGAARAFATEAVGAAALAFVWFSLRHPRNRGMAGDGALGVKALLFGLTMGGLMSVMAPITMAGLNPARDIAARLLCCAAGWGRYAFPTGGPFCSLMVYTVAPLLGALLGGSVAICLGDTQQ 237          
BLAST of jgi.p|Trimin1|349700 vs. uniprot
Match: A0A835YMP0_9STRA (Aquaporin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMP0_9STRA)

HSP 1 Score: 224 bits (570), Expect = 6.430e-70
Identity = 127/234 (54.27%), Postives = 160/234 (68.38%), Query Frame = 0
Query:    2 VAGVWAAVVAAMVACLSHVCQAHFNPALSLATKLLTPDALSWRRLGRITLSQLLGAAIGAAATLIAFSPPLAAFETARGLVRGNFNSQRSASALAPFYPNPNAHTYFML-GIGAGYPGAARAFATEAVGAAALAFVWFSLRHPRNRGMAGDGALGVKALLFGLTMGGLMSVMAPITMAGLNPARDIAARLLCCAAGWGRYAFPTGGPFCSLMVYTVAPLLGALLGGSVAICLGD 234
            VA VWA  + AM+ACLSHVC AHFNPA+S+A+K+L P +LSWR +G    SQ LGA  G+  TL AF+ P+AA E ++G +R  F  +RSA+ LA FYPNPNA  Y +L G GA +PG A A A E  G A LAFV FSL HPR++   G      K LL GLT+  +++V+ PITMAGLNPARDI AR++    GWG  A P  G   S++VYTVAP++GA+LGG +A  LGD
Sbjct:   30 VAAVWAWTITAMIACLSHVCGAHFNPAISIASKVLQPRSLSWRTVGLYCASQTLGAGAGSLFTLSAFAAPIAALEASQGALRAGFGGRRSAAILALFYPNPNALDYVILNGQGAPFPGMAAAAALEVAGTALLAFVAFSLGHPRSKVTQG-----AKPLLIGLTVASIITVLGPITMAGLNPARDIGARVIAYFGGWGSMALPHNGIIGSIVVYTVAPIVGAILGGKLAHRLGD 258          
BLAST of jgi.p|Trimin1|349700 vs. uniprot
Match: A0A0L0FW34_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FW34_9EUKA)

HSP 1 Score: 124 bits (312), Expect = 1.850e-31
Identity = 83/215 (38.60%), Postives = 118/215 (54.88%), Query Frame = 0
Query:   19 HVCQAHFNPALSLATKLLTPDALSWRRLGRITLSQLLGAAIGAAATLIAFSPPLAAFETARGLVRGNFNSQRSASALAPFYPNPNAHTYFMLGIGAGYPGAARAFATEAVGAAALAFVWFSLRHPRNRGMAGDGALGVKALLFGLTMGGLMSVMAPITMAGLNPARDIAARLLCCAAGWGRYAFPTGGPFCSLMVYTVAPLLGALLGGSVA-ICL 232
            HV  AH NP++S A  L+      WRR G   L+Q +GA +G+      FS  +A +E    +VRG   S+R+A     ++PNP ++      IG G     +AF  E +G A LAFV FS+  P N  +  + A     L  G T+  ++S++AP+T AGLNPARD + RLL    GWG  A P  GP     +Y +AP+LGA +GG +A +C+
Sbjct:    9 HVSGAHLNPSISFAFALIDHKDFGWRRFGYYVLAQFVGAFLGSLLVWSLFSGAVAHYEGVNNMVRGQPGSERTAMMFGEYFPNPASYPNQNEVIGIG-----QAFWAEMLGTAFLAFVIFSVTAPCNNVIPPNFA----PLFIGFTVSIIISLIAPLTQAGLNPARDFSPRLLALILGWGDIAIP--GPRNGFWIYLLAPMLGAPIGGFLANVCI 212          
BLAST of jgi.p|Trimin1|349700 vs. uniprot
Match: A0A6N9GML6_9CHLR (Aquaporin family protein n=3 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6N9GML6_9CHLR)

HSP 1 Score: 125 bits (315), Expect = 2.750e-31
Identity = 88/224 (39.29%), Postives = 112/224 (50.00%), Query Frame = 0
Query:    2 VAGVWAAVVAAMVACLSHVCQAHFNPALSLATKLLTPDALSWRRLGRITLSQLLGAAIGAAATLIAFSPPLAAFETARGLVRGNFNSQRSASALAPFYPNPNAHTYFMLGIGAGYPGAARAFATEAVGAAALAFVWFSLRHPRNRGMAGDGALGVKALLFGLTMGGLMSVMAPITMAGLNPARDIAARLLCCAAGWGRYAFPTGGPFCSLMVYTVAPLLGALLG 225
            VA VW   V   +     V  AH NPA+SL+  +   D     RL     +QL+GA I     LI F+P +  FET   +VRG   SQRSA A   ++PNP      +  +         AFA EA G A LAFV F+L   RN G+  +G +       G T+  L+S+ APIT  G NPARD   R++   AGWG  A P  GP     VY + PL+GA LG
Sbjct:   53 VAAVWGFGVTLAIYVSGAVSGAHLNPAVSLSFAIFRRDQFPLNRLFAYWAAQLIGAVIAGVVVLILFNPFIDRFETENDIVRGEAGSQRSAMAFGEYFPNPGMFDSAIFSVSP-----LHAFAVEAFGTAILAFVIFALTERRNAGIPTNGMV---PFFIGFTVAALISLFAPITQGGWNPARDFGPRIVSWLAGWGDIAIP--GPEGGFWVYILGPLVGAPLG 266          
BLAST of jgi.p|Trimin1|349700 vs. uniprot
Match: A0A1X7VQ25_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7VQ25_AMPQE)

HSP 1 Score: 125 bits (314), Expect = 9.870e-31
Identity = 84/215 (39.07%), Postives = 110/215 (51.16%), Query Frame = 0
Query:   16 CLS-HVCQAHFNPALSLATKLLTPDALSWRRLGRITLSQLLGAAIGAAATLIAFSPPLAAFETARGLVRGNFNSQRSASALAPFYPNPNAHTYFMLGIGAGYPGAARAFATEAVGAAALAFVWFSLRHPRNRGMAGDGALGVKALLFGLTMGGLMSVMAPITMAGLNPARDIAARLLCCAAGWGRYAFPTGGPFCSLMVYTVAPLLGALLGGSVA 229
            C+S H   AH NPA+SLA  ++      W RLG   L+Q LG+        IA+   + AFE AR + RG   SQ SA A   ++PNP     F      G      AF  E  G   L FV FS+ HP N  ++ +   G+   + GLT+  L+SV  P+TMAGLNPARD   R++   AGWG  A P  GP     +Y V P +G +LGG  +
Sbjct:  121 CISAHFSDAHLNPAVSLAFAVIRFKKFHWFRLGPYILAQFLGSLFAGLTVFIAYRGSINAFEDARNITRGEPGSQLSAMAFGEYFPNP---AVFNPNEFTGITSVFEAFLIETWGTFILVFVIFSVTHPSNAIISNN--KGLIPFVIGLTVAILISVYGPLTMAGLNPARDFGPRVIAAIAGWGTIAIP--GPRNGFWLYIVGPFIGGVLGGGAS 328          
BLAST of jgi.p|Trimin1|349700 vs. uniprot
Match: A0A507DB14_9FUNG (Aquaporin n=2 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507DB14_9FUNG)

HSP 1 Score: 123 bits (309), Expect = 2.010e-30
Identity = 88/229 (38.43%), Postives = 122/229 (53.28%), Query Frame = 0
Query:    2 VAGVWAAVVAAMVACLSHVCQAHFNPALSLATKLLTPDALSWRRLGRITLSQLLGAAIGAAATLIAFSPPLAAFETARGLVRGNFNSQRSASALAPFYPNPNAHTYFMLGIGAGYPGAARAFATEAVGAAALAFVWFSLRHPRNRGMAGDGALGVKALLFGLTMGGLMSVMAPITMAGLNPARDIAARLLCCAAGWGRYAFPTGGPFCSLMVYTVAPLLGALLGGSVAI 230
            VA VW   +A  +   SH+  AH NPA++LA  L   +   W ++    L+Q+LGA +  AA L  +   +A FE    + RG+  S RSA A   ++PNP A +   L           AF  E +G A LAF+ FSL   RN+ +AG  A      L G T+  L+SV+AP+T A LNPARDI  R++   AGWG  AF   GP  + +VY V P++GA +G    +
Sbjct:   73 VATVWGFGLALAIYVSSHISGAHLNPAMTLA--LAVWNEFPWNKVPGYILAQVLGALVAGAANLALYGSVIADFELQHNITRGSPESIRSAMAFGEYFPNPAAFSNPNL------VSTQVAFIAEVLGTAILAFMIFSLTDRRNKTLAGSEA--AIPFLIGFTVAVLISVIAPLTQACLNPARDIGPRIIAYYAGWGNVAF---GPSSTFIVYYVGPIVGAQIGAGFQV 288          
BLAST of jgi.p|Trimin1|349700 vs. uniprot
Match: A0A6B0Z1Y7_9CHLR (Aquaporin (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6B0Z1Y7_9CHLR)

HSP 1 Score: 119 bits (299), Expect = 1.020e-29
Identity = 83/199 (41.71%), Postives = 103/199 (51.76%), Query Frame = 0
Query:   27 PALSLATKLLTPDALSWRRLGRITLSQLLGAAIGAAATLIAFSPPLAAFETARGLVRGNFNSQRSASALAPFYPNPNAHTYFMLGIGAGYPGAARAFATEAVGAAALAFVWFSLRHPRNRGMAGDGALGVKALLFGLTMGGLMSVMAPITMAGLNPARDIAARLLCCAAGWGRYAFPTGGPFCSLMVYTVAPLLGALLG 225
            PA+SLA  +   D     RL     +QL+GA I     LI F+P +  FE   G+VRG   SQRSA A   ++PNP      M    A       AFA EA G A LAFV F+L   RN G+  +G +       G T+  L+S+ APIT AG NPARD   R++   AGWG  A P  GP     VY + PL+GA LG
Sbjct:    1 PAVSLAFAIFRRDQFPVNRLFAYWGAQLIGAVIAGVVVLILFNPFIDRFEMENGIVRGELGSQRSAMAFGEYFPNPG-----MFDSAAFSVSPLHAFAVEAFGTAILAFVIFALTERRNAGIPTNGMV---PFFIGFTVAALISLFAPITQAGWNPARDFGPRIVSWLAGWGDIAIP--GPEGGFWVYILGPLIGAPLG 189          
BLAST of jgi.p|Trimin1|349700 vs. uniprot
Match: A0A1E7EUJ1_9STRA (Major intrinsic protein family transmembrane channel n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EUJ1_9STRA)

HSP 1 Score: 122 bits (306), Expect = 1.700e-29
Identity = 80/228 (35.09%), Postives = 121/228 (53.07%), Query Frame = 0
Query:    2 VAGVWAAVVAAMVACLSHVCQAHFNPALSLATKLLTPD-ALSWRRLGRITLSQLLGAAIGAAATLIAFSPPLAAFETARGLVRGNFNSQRSASALAPFYPNPNAHTYFMLGIGAGYPGAARAFATEAVGAAALAFVWFSLRHPRNRGMAGDGALGVKALLFGLTMGGLMSVMAPITMAGLNPARDIAARLLCCAAGWGRYAFPTGGPFCSLMVYTVAPLLGALLGGSV 228
            VA VW   V   +   + +  AH NPA+S+A  ++ P  + +WR++   ++SQL GA +G+   L+ +S  +AAFET  G++R   +   SA A   ++ +P                   AF  E++G   LAFV F+L HP+N  M      G    L GLT+G L+S++AP+T AG NPARD   R++   AGW   AF       S  VY +AP++GA +G ++
Sbjct:  133 VASVWIIAVTIAICATASISGAHLNPAISIAFAIVRPSKSFNWRKVIPYSISQLGGAILGSWLNLVLYSSTIAAFETKNGIIRSGVSGLASARAFGEYFVSPVTTV--------------TAFLAESIGTCILAFVIFALTHPKNDTMKS----GFVPPLIGLTVGALISIIAPLTQAGFNPARDFGPRIVAWFAGWKTVAFT------SSWVYIIAPIVGASIGAAL 336          
BLAST of jgi.p|Trimin1|349700 vs. uniprot
Match: A0A1X6NYN3_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NYN3_PORUM)

HSP 1 Score: 119 bits (298), Expect = 3.470e-29
Identity = 84/224 (37.50%), Postives = 110/224 (49.11%), Query Frame = 0
Query:    2 VAGVWAAVVAAMVACLSHVCQAHFNPALSLATKLLTPDALSWRRLGRITLSQLLGAAIGAAATLIAFSPPLAAFETARGLVRGNFNSQRSASALAPFYPNPNAHTYFMLGIGAGYPGAARAFATEAVGAAALAFVWFSLRHPRNRGMAGDGALGVKALLFGLTMGGLMSVMAPITMAGLNPARDIAARLLCCAAGWGRYAFPTGGPFCSLMVYTVAPLLGALLG 225
            VA VW   VA  + C + V  AH NPA+SLA  L  PD   W++L     +Q  G  +G A  L  F P  AA+E   G+VRG   S  +A+A   ++PNP     F   +       A A A EA G   L FV  ++   R + M G   +       G T+  L+S+ AP+T AG NPARD   R++   AGWG  A P  GP     V+ V P +GA LG
Sbjct:   25 VATVWGFGVALAILCTASVSGAHLNPAVSLAFALFRPDDFPWKKLLPYWAAQYAGGVLGGALNLALFGPLFAAYEAREGIVRGEGGSVVTAAAFGEYFPNPG----FAKTVPPSAVSPAHALAVEAWGTGVLMFVILAIIDGRQKLMGGKEMI---PFYIGFTVAVLISLYAPLTQAGWNPARDFGPRIVAALAGWGSIAIP--GPRNGFWVFIVGPKIGAPLG 239          
BLAST of jgi.p|Trimin1|349700 vs. uniprot
Match: A0A3L7Q9X2_9BACT (Aquaporin family protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7Q9X2_9BACT)

HSP 1 Score: 119 bits (298), Expect = 7.280e-29
Identity = 88/241 (36.51%), Postives = 119/241 (49.38%), Query Frame = 0
Query:    2 VAGVWAAVVAAMVACLSHVCQAHFNPALSLATKLLTPDALSWRRLGRITLSQLLGAAIGAAATLIAFSPPLAAFETARGLVRGNFNSQRSASALAPFYPNPNAHTYFMLGIGA--------------GYPGAARAFATEAVGAAALAFVWFSLRHPRNRGMAGDGALGVKALLFGLTMGGLMSVMAPITMAGLNPARDIAARLLCCAAGWGRYAFPTGGPFCSLMVYTVAPLLGALLGGSV 228
            VA VW   +   +  +  +  AH NPA+++A  L       W+ +G     QL GA + A    I FSP LAA E  +G+ RG   S+ +A     ++P P +     LG G               G PG  +AF  E +G A LAFV F++   RN G     A G   +  GLT+  L+SV+AP+T A  NPARD+  RL    AGWG  A P       L VY VAP+ G+L+GG+V
Sbjct:   46 VAIVWGVAIMLAIYSIGSISGAHINPAMTIA--LAVHRGFPWKNVGPYIAGQLTGAILAAGTLFILFSPHLAALEKLKGVERGQPGSEMTAMCYGEYFPAPGS-----LGSGTEPYSAEKHAELKAKGNPG--QAFLAELLGTAVLAFVVFAVTDDRNSGRP---AAGQAPIFIGLTVAVLISVIAPLTQACFNPARDLGPRLFAYFAGWGAIALPGFTDLSWLTVYIVAPMAGSLVGGAV 274          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349700 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YS68_9STRA2.940e-162100.00Aquaporin-like protein n=1 Tax=Tribonema minus Tax... [more]
A0A835YMP0_9STRA6.430e-7054.27Aquaporin-like protein n=1 Tax=Tribonema minus Tax... [more]
A0A0L0FW34_9EUKA1.850e-3138.60Uncharacterized protein n=1 Tax=Sphaeroforma arcti... [more]
A0A6N9GML6_9CHLR2.750e-3139.29Aquaporin family protein n=3 Tax=Chloroflexi bacte... [more]
A0A1X7VQ25_AMPQE9.870e-3139.07Uncharacterized protein n=1 Tax=Amphimedon queensl... [more]
A0A507DB14_9FUNG2.010e-3038.43Aquaporin n=2 Tax=Synchytrium endobioticum TaxID=2... [more]
A0A6B0Z1Y7_9CHLR1.020e-2941.71Aquaporin (Fragment) n=1 Tax=Chloroflexi bacterium... [more]
A0A1E7EUJ1_9STRA1.700e-2935.09Major intrinsic protein family transmembrane chann... [more]
A0A1X6NYN3_PORUM3.470e-2937.50Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A3L7Q9X2_9BACT7.280e-2936.51Aquaporin family protein n=1 Tax=Planctomycetes ba... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000425Major intrinsic proteinPRINTSPR00783MINTRINSICPcoord: 6..30
score: 29.74
coord: 45..64
score: 30.17
coord: 162..184
score: 34.55
coord: 212..232
score: 29.36
coord: 125..143
score: 24.06
IPR000425Major intrinsic proteinPFAMPF00230MIPcoord: 2..227
e-value: 5.4E-21
score: 75.3
IPR023271Aquaporin-likeGENE3D1.20.1080.10Glycerol uptake facilitator protein.coord: 1..233
e-value: 3.6E-36
score: 126.6
IPR023271Aquaporin-likeSUPERFAMILY81338Aquaporin-likecoord: 2..229
NoneNo IPR availablePANTHERPTHR43829AQUAPORIN OR AQUAGLYCEROPORIN RELATEDcoord: 4..228
IPR022357Major intrinsic protein, conserved sitePROSITEPS00221MIPcoord: 24..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_47contigContig_47:438631..441130 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349700mRNA_6237Tribonema minus UTEX_B_3156 mRNAContig_47 438356..441932 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|349700|estExt_Genemark1.C_Ctg_470061 ID=Trimin1|349700|estExt_Genemark1.C_Ctg_470061|Name=jgi.p|Trimin1|349700|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=238bp
MVAGVWAAVVAAMVACLSHVCQAHFNPALSLATKLLTPDALSWRRLGRIT
LSQLLGAAIGAAATLIAFSPPLAAFETARGLVRGNFNSQRSASALAPFYP
NPNAHTYFMLGIGAGYPGAARAFATEAVGAAALAFVWFSLRHPRNRGMAG
DGALGVKALLFGLTMGGLMSVMAPITMAGLNPARDIAARLLCCAAGWGRY
AFPTGGPFCSLMVYTVAPLLGALLGGSVAICLGDTQQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000425MIP
IPR023271Aquaporin-like
IPR022357MIP_CS