Trimin1|349668|estExt_Genemark1.C_Ctg_470011 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|349668
Unique NameTrimin1|349668|estExt_Genemark1.C_Ctg_470011
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length140
Homology
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BLAST of jgi.p|Trimin1|349668 vs. uniprot
Match: A0A835Z0Q6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0Q6_9STRA)

HSP 1 Score: 263 bits (672), Expect = 8.520e-89
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0 
Query:    1 MEAPDALADAGDDASGAAGTTFSNALMKRLAAQALPQGAALDPDAVSMLNQCCTGFIRAMAGHLQGPKTVTPDAVDALLAEMGFGEYAAAAAAQAESTDETTHRKKKRAKVKYTDEEIAERIAEQEKLCAASWKQMYGD 139
            MEAPDALADAGDDASGAAGTTFSNALMKRLAAQALPQGAALDPDAVSMLNQCCTGFIRAMAGHLQGPKTVTPDAVDALLAEMGFGEYAAAAAAQAESTDETTHRKKKRAKVKYTDEEIAERIAEQEKLCAASWKQMYGD
Sbjct:    1 MEAPDALADAGDDASGAAGTTFSNALMKRLAAQALPQGAALDPDAVSMLNQCCTGFIRAMAGHLQGPKTVTPDAVDALLAEMGFGEYAAAAAAQAESTDETTHRKKKRAKVKYTDEEIAERIAEQEKLCAASWKQMYGD 139
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349668 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835Z0Q6_9STRA8.520e-89100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 18..138
e-value: 6.3E-12
score: 47.3
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 21..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_47contigContig_47:93475..94110 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349668mRNA_6179Tribonema minus UTEX_B_3156 mRNAContig_47 93475..94114 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|349668|estExt_Genemark1.C_Ctg_470011 ID=Trimin1|349668|estExt_Genemark1.C_Ctg_470011|Name=jgi.p|Trimin1|349668|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=140bp
MEAPDALADAGDDASGAAGTTFSNALMKRLAAQALPQGAALDPDAVSMLN
QCCTGFIRAMAGHLQGPKTVTPDAVDALLAEMGFGEYAAAAAAQAESTDE
TTHRKKKRAKVKYTDEEIAERIAEQEKLCAASWKQMYGD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009072Histone-fold