mRNA_6218 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|166949
Unique Name	mRNA_6218
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|166949 vs. uniprot
Match: A0A836CDM4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDM4_9STRA)

HSP 1 Score: 1114 bits (2882), Expect = 0.000e+0
Identity = 740/740 (100.00%), Postives = 740/740 (100.00%), Query Frame = 1

Query:    1 MATAAGQASLLAAVEAKRSKIEVPPPTLKKLEREAERKKEFWNQNVIIKCVDANGIAVPNCSWRLQRRKLTPDFIKLLCQRCPLAINIDYLRDAATAEVVWLEDMQAVCKPAPWAYTVIPKEERRVADDRADAHYVGDTHLMLLQAPLRTENEEFDEDVEISGARDLIAQMTQQMEALDKKLGRVAAVQHGHTEAQQEAAREAMYATIVMEKEILAASLKASRAYFCEEAADVLASITEARRATPFALRRSAIDAARATCTYLITVGGAAGPALEDALVAKRNWPGIKLAVAHAENPAWAGRGTVPDGSKAYLPCYTRHGANMRGAALCRLAHGFGQHRAVRPLRRVATAAGGARAGNTKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGEEFLEHVPFCGARFAFYSGQFHEGTRTGAGVLYGEGGALWGAFEGGHARGACGEHRSDGTRLAGDWSAAARLPVEPSNPYAIGVLDGAARIVFPDGAVYEGEVSAGRVSGEGTYCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVLRRGNVKTVYDAHTGGQRPMANRVYEGTFRGGGLEGGGAVTVHRTRRMHCVAAREGDRWGRGAVRTARREAAAXXXXXXXXXXXXXXXXXXXATAEAEKRRVARKQVRRAEADIVADYHEPLTLEHVRSVSAKSTSASSC 2220
            MATAAGQASLLAAVEAKRSKIEVPPPTLKKLEREAERKKEFWNQNVIIKCVDANGIAVPNCSWRLQRRKLTPDFIKLLCQRCPLAINIDYLRDAATAEVVWLEDMQAVCKPAPWAYTVIPKEERRVADDRADAHYVGDTHLMLLQAPLRTENEEFDEDVEISGARDLIAQMTQQMEALDKKLGRVAAVQHGHTEAQQEAAREAMYATIVMEKEILAASLKASRAYFCEEAADVLASITEARRATPFALRRSAIDAARATCTYLITVGGAAGPALEDALVAKRNWPGIKLAVAHAENPAWAGRGTVPDGSKAYLPCYTRHGANMRGAALCRLAHGFGQHRAVRPLRRVATAAGGARAGNTKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGEEFLEHVPFCGARFAFYSGQFHEGTRTGAGVLYGEGGALWGAFEGGHARGACGEHRSDGTRLAGDWSAAARLPVEPSNPYAIGVLDGAARIVFPDGAVYEGEVSAGRVSGEGTYCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVLRRGNVKTVYDAHTGGQRPMANRVYEGTFRGGGLEGGGAVTVHRTRRMHCVAAREGDRWGRGAVRTARREAAAXXXXXXXXXXXXXXXXXXXATAEAEKRRVARKQVRRAEADIVADYHEPLTLEHVRSVSAKSTSASSC
Sbjct:    1 MATAAGQASLLAAVEAKRSKIEVPPPTLKKLEREAERKKEFWNQNVIIKCVDANGIAVPNCSWRLQRRKLTPDFIKLLCQRCPLAINIDYLRDAATAEVVWLEDMQAVCKPAPWAYTVIPKEERRVADDRADAHYVGDTHLMLLQAPLRTENEEFDEDVEISGARDLIAQMTQQMEALDKKLGRVAAVQHGHTEAQQEAAREAMYATIVMEKEILAASLKASRAYFCEEAADVLASITEARRATPFALRRSAIDAARATCTYLITVGGAAGPALEDALVAKRNWPGIKLAVAHAENPAWAGRGTVPDGSKAYLPCYTRHGANMRGAALCRLAHGFGQHRAVRPLRRVATAAGGARAGNTKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGEEFLEHVPFCGARFAFYSGQFHEGTRTGAGVLYGEGGALWGAFEGGHARGACGEHRSDGTRLAGDWSAAARLPVEPSNPYAIGVLDGAARIVFPDGAVYEGEVSAGRVSGEGTYCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVLRRGNVKTVYDAHTGGQRPMANRVYEGTFRGGGLEGGGAVTVHRTRRMHCVAAREGDRWGRGAVRTARREAAAXXXXXXXXXXXXXXXXXXXATAEAEKRRVARKQVRRAEADIVADYHEPLTLEHVRSVSAKSTSASSC 740

[Close]

BLAST of jgi.p|Trimin1|166949 vs. uniprot
Match: D8LJB5_ECTSI (MORN domain repeat containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJB5_ECTSI)

HSP 1 Score: 301 bits (770), Expect = 4.080e-87
Identity = 285/736 (38.72%), Postives = 394/736 (53.53%), Query Frame = 1

Query:    1 MATAAGQASLLAAVEAKRSKIEVPPPTLKKLEREAERKKEFWNQNVIIKCVDANGIAVPNCSWRLQRRKLTPDFIKLLCQRCPLAINIDYLRDAATAEVVWLEDMQAVCKPAPWAYTVIPKEERRVADDRADAHYVGDTHLMLLQAPLRTENEEFDEDVEISGARDLIAQMTQQMEALDKKLGRVAAVQH----GHTEAQQEAAREAMYATIVMEKEILAASLKASRAYFCEEAADVLASITEARRATPFALRRSAIDAARATCTYLITVGGAAGPALEDALVAKRNWPGIKLAVAHAENPAWAGRGTVPDGSKAYLPCYTRHGANMRGAALCRLAHGFGQHRAVRPLRRVATAAGGARAGNTKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGEEFLEHVPFCGARFAFYSGQFHEGTRTGAGVLYGEGGALWGAFEGGHARGACGEHRSDGTRLAGDWSAAARLPVEPS--NPYAIGVLDGAARIVFPDGAVYEGEVSAGRVSGEGTYCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVLRRGNVKTVYDAHTGGQRPMANRVYEGTFRGGGLEGGGAVTVHRTRRMHCVAAREGDRWGRGAVRTARREAAAXXXXXXXXXXXXXXXXXXXATAEAEKRRVARKQVRRAEADIVADYHEPLTLEHVRSV 2190
            M+   G A++  A+EA+RSKI+ P  +LK LER+A RKK +WN+ + I C+D +G  +  C+W++ RR+LT   ++ +C  CP  + I+YL+D  T ++VW    Q  C P PW Y V+  EE+ V D   D  Y GD  +M+   PL T NE+ +       AR+++  +  + + ++ +L RV  ++     G  + +++   +   A    E+    ++               L  I +  + TP  L +  +      CTY ++  G  GP LED + AK +WPGIKLA AH + P WAGRG +PDGSK+Y+  YT H  NMR   +CRL HGFGQH+     R  AT A  + A  +                                   G E  + +PF G  F FY G+F EG ++G G+ +      +G ++ G   G      ++G R+ G++ +  R P   S  NPY  GV  G   I +  G  Y GE+  GR++G+G +      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     G L RGNVK VYD  +G +   +NR+YEG +R   L  G  VT+ +    HC    +G  + R   R  RRE                         + +K R+  KQV++A  D++ D+ + +T E +R V
Sbjct:    1 MSVPEGTAAIREAIEARRSKIKTPGESLKTLERDASRKKAWWNEKIQIACMDKDGEPIQGCAWKVPRRRLTEVVLRNMCLTCPEHVKIEYLKDQTTGDIVWPPHAQMHCHPLPWNYAVVAMEEKEVIDRSRDPTYYGDVQIMIFNVPLNTNNEKTE-------AREIVRTLEAEAKMVEHQLSRVGYMKFTKKTGFGKDEKQLLTDEEQAAKREERNEALSAXXXXXXXXXXXXXXXLEGILKKTKDTPVHLEQGNVQKKVGNCTYYVSFPGFYGPTLEDIVCAKTDWPGIKLAAAHDDLPPWAGRGEIPDGSKSYIKRYTEHAINMRAVQICRLQHGFGQHKTPLSTRGGATPAPTSPANASLAVRPLRDTSSAPRPPTATGGNVTGGQAKEGGQGKGVE--DELPFAGKEFYFYHGEFAEGLKSGFGMEFTNADVYYGEYKKGKRNGVGALQCANGDRIEGNFVSETRFPEAGSEPNPYTAGVSHGIVEINYASGGTYRGEMKHGRITGKGEFVSCLGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRSGPGTLFRGNVKRVYDPRSGKKAIKSNRIYEGNWRASELRTGSMVTMTKAGVTHCAGPNKGVWYNRAVDRIKRRETQTHRKTVESLDFYGRYQTLLRTEVQKKKSRLYSKQVKQANQDLINDHVKKITAEELREV 727

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|166949 vs. uniprot

BLAST of jgi.p|Trimin1|166949 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A836CDM4_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
D8LJB5_ECTSI	4.080e-87	38.72	MORN domain repeat containing protein n=1 Tax=Ecto...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_47	contig	Contig_47:288347..292343 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|166949\|e_gw1.47.235.1
Description	1-phosphatidylinositol-4-phosphate 5-kinase activity
COG category	T
Max annot lvl	2759\|Eukaryota
EggNOG OGs	COG5253@1\|root,KOG0229@2759\|Eukaryota
Evalue	6.69e-88
Seed ortholog	2880.D8LJB5
Hectar predicted targeting category	other localisation
Ec32 ortholog description	MORN motif containing protein
Ec32 ortholog	Ec-02_005460.1
TranscriptId	167271
Track	FilteredModels1
ProteinId	166949

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|166949	gene_6218	Tribonema minus UTEX_B_3156	gene	Contig_47 288347..292343 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|166949	Trimin1\|166949\|e_gw1.47.235.1	Tribonema minus UTEX_B_3156	polypeptide	Contig_47 288347..292343 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_6218_1	exon_6218_1	Tribonema minus UTEX_B_3156	exon	Contig_47 288347..288814 +
exon_6218_2	exon_6218_2	Tribonema minus UTEX_B_3156	exon	Contig_47 288863..289078 +
exon_6218_3	exon_6218_3	Tribonema minus UTEX_B_3156	exon	Contig_47 289349..289699 +
exon_6218_4	exon_6218_4	Tribonema minus UTEX_B_3156	exon	Contig_47 289964..290817 +
exon_6218_5	exon_6218_5	Tribonema minus UTEX_B_3156	exon	Contig_47 291337..291565 +
exon_6218_6	exon_6218_6	Tribonema minus UTEX_B_3156	exon	Contig_47 292239..292343 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_6218	CDS_6218	Tribonema minus UTEX_B_3156	CDS	Contig_47 288347..288814 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_47:288347..292343+
coding sequence from alignment at Contig_47:288347..292343+

spliced messenger RNA

>mRNA_6218 ID=mRNA_6218|Name=jgi.p|Trimin1|166949|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2223bp|location=Sequence derived from alignment at Contig_47:288347..292343+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGACTGCTGCAGGGCAGGCGAGCCTGCTTGCCGCAGTGGAGGCCAA
GCGCTCGAAGATAGAGGTCCCGCCTCCAACTCTAAAGAAGCTGGAGCGAG
AAGCAGAGAGGAAAAAGGAGTTCTGGAACCAGAATGTGATCATCAAGTGC
GTCGACGCCAACGGCATCGCCGTGCCCAATTGCAGCTGGCGCCTGCAGAG
ACGCAAGCTGACTCCTGACTTCATCAAGCTGCTGTGTCAGCGCTGCCCCC
TGGCCATCAACATTGACTACCTGAGAGATGCCGCAACGGCCGAGGTGGTG
TGGCTGGAGGACATGCAGGCGGTCTGCAAGCCCGCCCCCTGGGCCTACAC
CGTCATCCCCAAAGAGGAGCGCAGGGTCGCGGACGACAGGGCCGACGCGC
ACTACGTCGGGGACACGCACCTGATGCTCCTGCAGGCACCGCTGCGCACG
GAGAACGAGGAGTTTGACGAGGACGTGGAGATTAGCGGCGCGAGGGACCT
CATTGCTCAGATGACGCAGCAGATGGAGGCGCTGGACAAGAAGCTCGGCA
GGGTCGCCGCGGTGCAGCACGGGCACACGGAGGCGCAGCAGGAGGCGGCG
CGCGAGGCCATGTACGCGACCATCGTCATGGAGAAGGAGATCCTCGCCGC
GAGTCTCAAGGCGAGTCGTGCTTACTTTTGTGAGGAGGCCGCAGACGTGC
TGGCGTCCATCACGGAGGCGCGCCGCGCGACGCCCTTCGCGCTGCGCCGC
AGCGCCATCGACGCCGCGCGCGCCACCTGCACCTACCTCATCACCGTGGG
CGGCGCCGCGGGCCCCGCGCTCGAGGACGCGCTCGTGGCCAAGCGCAACT
GGCCGGGCATCAAGCTCGCCGTCGCGCACGCGGAGAACCCTGCGTGGGCG
GGTCGCGGAACGGTCCCGGATGGTTCCAAGGCGTACCTCCCGTGCTACAC
GCGCCACGGCGCCAACATGCGCGGCGCGGCGCTGTGCCGCCTCGCGCACG
GGTTCGGGCAGCACCGCGCCGTGCGGCCGCTGCGCCGCGTCGCGACGGCA
GCAGGCGGCGCCCGCGCCGGCAACACCAAGACAGCAGCGCCGCCATCGCA
GCGCAGCGGCGGCGGCGCGCCCTCGCCACGCAGCGCGGCGCGGGCGGGGG
ACGGCAGCAGCGGCGGTGGCGGCGGCGGCAGCGGCGAGGAATTCTTGGAG
CACGTTCCGTTCTGCGGCGCGCGCTTCGCCTTCTACAGCGGGCAGTTCCA
CGAGGGCACGCGCACGGGCGCGGGCGTGCTGTACGGTGAGGGCGGGGCGC
TGTGGGGGGCGTTCGAGGGGGGGCACGCGCGCGGCGCGTGCGGCGAGCAC
CGTTCCGACGGAACGCGCCTCGCGGGGGACTGGTCCGCGGCGGCGCGCCT
TCCGGTGGAACCTTCCAACCCGTACGCGATCGGCGTTCTGGATGGGGCCG
CGCGCATCGTCTTCCCCGACGGCGCCGTCTACGAAGGTGAAGTTTCCGCG
GGGAGGGTCTCGGGGGAGGGGACGTACTGCGGGCCTGGGGGGGAGATCAC
GACGGGGACGTTTGTAGATGGGGTGCTGGAGGGCTGGGGGGAGCACCAGG
ACACGCTTGGAACGGTCTGGGAAGGTTCCTGGAGGAACGGCGCGCTGCAC
GGTCAGGGGCGCGTCGCCAGCGCCAAGTGGGGGTCGTACGCGGGGGACTG
GGAGGGGGGGGTGCGGTGCGGCAAGGGGACGGCGGTGCTGCGGGATGGGT
CCATGCACACGGGGTTTTATCTGGATGGGGAGCGCTGCGGTCCGGGCGTG
CTGCGGCGCGGCAACGTGAAGACGGTGTACGACGCGCACACGGGGGGGCA
GCGGCCCATGGCTAACAGGGTGTACGAGGGCACATTCAGGGGGGGCGGCC
TCGAGGGCGGCGGCGCCGTGACCGTACACCGCACGCGCCGCATGCACTGC
GTCGCGGCGCGCGAGGGGGACAGGTGGGGGCGCGGCGCGGTGCGGACGGC
GCGGCGGGAGGCAGCGGCGCGGCGCGCGGCGGCGGCGCGGCGCGAGTTCC
TGGCGCGGCTGGAGGCGCTCGTGCGCGCGACGGCGGAGGCGGAGAAGCGG
CGCGTGGCACGCAAGCAGGTGCGGCGCGCTGAAGCCGACATTGTGGCCGA
CTACCATGAGCCCTTGACGCTGGAGCACGTCCGCTCGGTGAGTGCCAAGT
CGACTTCAGCATCAAGTTGTTGA

protein sequence of jgi.p|Trimin1|166949

>Trimin1|166949|e_gw1.47.235.1 ID=Trimin1|166949|e_gw1.47.235.1|Name=jgi.p|Trimin1|166949|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=741bp
MATAAGQASLLAAVEAKRSKIEVPPPTLKKLEREAERKKEFWNQNVIIKC
VDANGIAVPNCSWRLQRRKLTPDFIKLLCQRCPLAINIDYLRDAATAEVV
WLEDMQAVCKPAPWAYTVIPKEERRVADDRADAHYVGDTHLMLLQAPLRT
ENEEFDEDVEISGARDLIAQMTQQMEALDKKLGRVAAVQHGHTEAQQEAA
REAMYATIVMEKEILAASLKASRAYFCEEAADVLASITEARRATPFALRR
SAIDAARATCTYLITVGGAAGPALEDALVAKRNWPGIKLAVAHAENPAWA
GRGTVPDGSKAYLPCYTRHGANMRGAALCRLAHGFGQHRAVRPLRRVATA
AGGARAGNTKTAAPPSQRSGGGAPSPRSAARAGDGSSGGGGGGSGEEFLE
HVPFCGARFAFYSGQFHEGTRTGAGVLYGEGGALWGAFEGGHARGACGEH
RSDGTRLAGDWSAAARLPVEPSNPYAIGVLDGAARIVFPDGAVYEGEVSA
GRVSGEGTYCGPGGEITTGTFVDGVLEGWGEHQDTLGTVWEGSWRNGALH
GQGRVASAKWGSYAGDWEGGVRCGKGTAVLRDGSMHTGFYLDGERCGPGV
LRRGNVKTVYDAHTGGQRPMANRVYEGTFRGGGLEGGGAVTVHRTRRMHC
VAAREGDRWGRGAVRTARREAAARRAAAARREFLARLEALVRATAEAEKR
RVARKQVRRAEADIVADYHEPLTLEHVRSVSAKSTSASSC*

mRNA from alignment at Contig_47:288347..292343+

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_6218 ID=mRNA_6218|Name=jgi.p|Trimin1|166949|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3997bp|location=Sequence derived from alignment at Contig_47:288347..292343+ (Tribonema minus UTEX_B_3156 )
ATGGCGACTGCTGCAGGGCAGGCGAGCCTGCTTGCCGCAGTGGAGGCCAA
GCGCTCGAAGATAGAGGTCCCGCCTCCAACTCTAAAGAAGCTGGAGCGAG
AAGCAGAGAGGAAAAAGGAGTTCTGGAACCAGAATGTGATCATCAAGTGC
GTCGACGCCAACGGCATCGCCGTGCCCAATTGCAGCTGGCGCCTGCAGAG
ACGCAAGCTGACTCCTGACTTCATCAAGCTGCTGTGTCAGCGCTGCCCCC
TGGCCATCAACATTGACTACCTGAGAGATGCCGCAACGGCCGAGGTGGTG
TGGCTGGAGGACATGCAGGCGGTCTGCAAGCCCGCCCCCTGGGCCTACAC
CGTCATCCCCAAAGAGGAGCGCAGGGTCGCGGACGACAGGGCCGACGCGC
ACTACGTCGGGGACACGCACCTGATGCTCCTGCAGGCACCGCTGCGCACG
GAGAACGAGGAGTTTGACGTCACGCCCGAGGACATTCGCGCGTGGCTCCT
GTTCGGCTTGATGGAGGAGGACGTGGAGATTAGCGGCGCGAGGGACCTCA
TTGCTCAGATGACGCAGCAGATGGAGGCGCTGGACAAGAAGCTCGGCAGG
GTCGCCGCGGTGCAGCACGGGCACACGGAGGCGCAGCAGGAGGCGGCGCG
CGAGGCCATGTACGCGACCATCGTCATGGAGAAGGAGATCCTCGCCGCGA
GTCTCAAGGCGAGTCGTGCTTACTTTTGTGAGGTCTGCTGAGACCTGCTG
CAGATATGTGCTGCGCACACGCGTCATGCCAAAACCGTGTGGTTGGCGAC
CATTGTGTCGCCGCGAGTATCATTAACTTCAAGCGTTCCGCGTGCAGCTT
CCCGCGTGCAGCCTTTGCACACTCCACCAGGCATGCGCTGCGACAACTGC
CCATGAAGCTGCCATTCGGCATCCACTCATTCAACCCCCAGGCTGCTGCA
GCTCCTCAAACGCGAGACTCATCGCGGCCTCTGCCCCCCCGCCGCAACAC
AGGAGGCCGCAGACGTGCTGGCGTCCATCACGGAGGCGCGCCGCGCGACG
CCCTTCGCGCTGCGCCGCAGCGCCATCGACGCCGCGCGCGCCACCTGCAC
CTACCTCATCACCGTGGGCGGCGCCGCGGGCCCCGCGCTCGAGGACGCGC
TCGTGGCCAAGCGCAACTGGCCGGGCATCAAGCTCGCCGTCGCGCACGCG
GAGAACCCTGCGTGGGCGGGTCGCGGAACGGTCCCGGATGGTTCCAAGGC
GTACCTCCCGTGCTACACGCGCCACGGCGCCAACATGCGCGGCGCGGCGC
TGTGCCGCCTCGCGCACGGGTTCGGGCAGCACCGCGCCGTGCGGCCGCTG
CGCGTGGCAGCGGCAGCAGCGCTCAGCGGTGCAAGGACCGACGGCGACGA
AAACGACGACCCGGCATTCAGCCCGCCGGGCACGCCGGGCAGCAGCGCTC
AACAACTGCAGAGTGGCAGCGCTCATTCACCGCTTTCGACGCCGGCCGCC
GCTCCCGCCGCGGCGCCGACGAAGCGCGGCGGCGGCGGCGGCGGCCTGCT
GCGCGACATCGGCAACCTCGCGCGCACCGTGGACGCCATGGTGGACACGG
CCGCGGAGACGCTGGAGCGCGTCGCGACGGCAGCAGGCGGCGCCCGCGCC
GGCAACACCAAGACAGCAGCGCCGCCATCGCAGCGCAGCGGCGGCGGCGC
GCCCTCGCCACGCAGCGCGGCGCGGGCGGGGGACGGCAGCAGCGGCGGTG
GCGGCGGCGGCAGCGGCGAGGAATTCTTGGAGCACGTTCCGTTCTGCGGC
GCGCGCTTCGCCTTCTACAGCGGGCAGTTCCACGAGGGCACGCGCACGGG
CGCGGGCGTGCTGTACGGTGAGGGCGGGGCGCTGTGGGGGGCGTTCGAGG
GGGGGCACGCGCGCGGCGCGTGCGGCGAGCACCGTTCCGACGGAACGCGC
CTCGCGGGGGACTGGTCCGCGGCGGCGCGCCTTCCGGTGGAACCTTCCAA
CCCGTACGCGATCGGCGTTCTGGATGGGGCCGCGCGCATCGTCTTCCCCG
ACGGCGCCGTCTACGAAGGTGAAGTTTCCGCGGGGAGGGTCTCGGGGGAG
GGGACGTACTGCGGGCCTGGGGGGGAGATCACGACGGGGACGTTTGTAGA
TGGGGTGCTGGAGGGCTGGGGGGAGCACCAGGACACGCTTGGAACGGTCT
GGGAAGGTTCCTGGAGGAACGGCGCGCTGCACGGTCAGGGGCGCGTCGCC
AGCGCCAAGTGGGGGTCGTACGCGGGGGACTGGGAGGGGGGGGTGCGGTG
CGGCAAGGGGACGGCGGTGCTGCGGGATGGGTCCATGCACACGGGGTTTT
ATCTGGATGGGGAGCGCTGCGGTCCGGGCGTGCTGCGGCGCGGCAACGTG
AAGACGGTGTACGACGCGCACACGGGGGGGCAGCGGCCCATGGCTAACAG
GGTGTACGAGGGCACATTCAGGTATGTAGGTTTGGTGATTCTCTAACCCG
AAGTGCCGCTAGGGCAAGGAACTGGTTGCGCTGAGTCGGAGGGCTTCAAG
ATCGTTCCTCGACAAAAGCACTTGTGTCAGAAGAGGAAATTGTCAATTCA
CACTTGAAGTATGACGTGCGGTTTGAGCGATGGCAACCTGTTTTGACACG
CCAACCTCGGGCACAGCATCATGATCAATCGCCACATCCTATTAAGACCG
GGCTTCTACTATATGTCGCTTGCCTTTAGACCTTTCCACTATATGCAGGC
AGCGGTGCGCGGCATGTGAAGTGCGCCGTGAGCAAGTTGACAGACTATAC
ATACCTTACCTACCCCTACCCCCAACTGCTGCCCATCTGCTGTGATCGGA
CAGCAGAACGACGTGCCGCCATCGCATTCAGGGGTAGCGATAGATGTATA
GAATCAACGCATCTGTCGCACAGGCGGCCAGCATGGTCGCACCACGTGTA
CCAAAACATCTCATGGCAATCACCAATCGCTTTCGCCCAGGGGGGGCGGC
CTCGAGGGCGGCGGCGCCGTGACCGTACACCGCACGCGCCGCATGCACTG
CGTCGCGGCGCGCGAGGGGGACAGGTGGGGGCGCGGCGCGGTGCGGACGG
CGCGGCGGGAGGCAGCGGCGCGGCGCGCGGCGGCGGCGCGGCGCGAGTTC
CTGGCGCGGCTGGAGGCGCTCGTGCGCGCGACGGCGGAGGCGGAGAAGCG
GCGCGTGGCACGCAAGCAGGTGAGCTGATCGGCAGCTGAATGTTGATGTT
ACATGTTGAAGTTTTCTGGTTGAAGTTTCTGGTTGAAGTTGGGATACAGC
GCGGCGCAGCGCAGTTGCTGGCGCGGCTGGAGGTGCTCGTGAGGGCGACG
GCGGAGGAGGAGAAGCAGGTGGGGACTGAGCGCTGTGTGTGCGGTGATGG
GGTGATGGGAATATGGGAAGTTCAGTTTTCAAGTTTGATGTTGAAGTTTG
CAGTTGAAGTTGTGGGTAGAGCACGGTGGCGCAGCGCGAGTTTCTGGCGC
GGCTGGTGAAATGCTGGTGCGAGGAGCGGCAGAGGGGGAAACGCGTCGCG
CAGCGCGCAAGCAGGTGCGCCTGAGCCGTGCTGCGCTGCTGGGAAGTGCA
ATGACGAAGTTAGAATGATTGAAGTTGTGGGCTAGGAGCGCGGCGCGCGC
AGCGGTTAGTTTTGCCAAGGGCATGAAGAAACCCAGATTTCTAGTCTACT
TGATGCGTTACTGCATGGGTTGATGCTGTACAGTAGATCAGAACGTACCT
CTCTAGCAGCTGAAGGCTATGAGCCCACATCACCTCAGCATCGCTTCACG
TTCTACATGCACTTGACAGACTTTCCATGCTGCTTCTACTGTGTATGTGT
AGCCCCAACTCTGACCTAACCCTAACCCTCACCCTAACTCAGGTGCGGCG
CGCTGAAGCCGACATTGTGGCCGACTACCATGAGCCCTTGACGCTGGAGC
ACGTCCGCTCGGTGAGTGCCAAGTCGACTTCAGCATCAAGTTGTTGA

Coding sequence (CDS) from alignment at Contig_47:288347..292343+

>mRNA_6218 ID=mRNA_6218|Name=jgi.p|Trimin1|166949|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2223bp|location=Sequence derived from alignment at Contig_47:288347..292343+ (Tribonema minus UTEX_B_3156 )
ATGGCGACTGCTGCAGGGCAGGCGAGCCTGCTTGCCGCAGTGGAGGCCAA
GCGCTCGAAGATAGAGGTCCCGCCTCCAACTCTAAAGAAGCTGGAGCGAG
AAGCAGAGAGGAAAAAGGAGTTCTGGAACCAGAATGTGATCATCAAGTGC
GTCGACGCCAACGGCATCGCCGTGCCCAATTGCAGCTGGCGCCTGCAGAG
ACGCAAGCTGACTCCTGACTTCATCAAGCTGCTGTGTCAGCGCTGCCCCC
TGGCCATCAACATTGACTACCTGAGAGATGCCGCAACGGCCGAGGTGGTG
TGGCTGGAGGACATGCAGGCGGTCTGCAAGCCCGCCCCCTGGGCCTACAC
CGTCATCCCCAAAGAGGAGCGCAGGGTCGCGGACGACAGGGCCGACGCGC
ACTACGTCGGGGACACGCACCTGATGCTCCTGCAGGCACCGCTGCGCACG
GAGAACGAGGAGTTTGACGAGGACGTGGAGATTAGCGGCGCGAGGGACCT
CATTGCTCAGATGACGCAGCAGATGGAGGCGCTGGACAAGAAGCTCGGCA
GGGTCGCCGCGGTGCAGCACGGGCACACGGAGGCGCAGCAGGAGGCGGCG
CGCGAGGCCATGTACGCGACCATCGTCATGGAGAAGGAGATCCTCGCCGC
GAGTCTCAAGGCGAGTCGTGCTTACTTTTGTGAGGAGGCCGCAGACGTGC
TGGCGTCCATCACGGAGGCGCGCCGCGCGACGCCCTTCGCGCTGCGCCGC
AGCGCCATCGACGCCGCGCGCGCCACCTGCACCTACCTCATCACCGTGGG
CGGCGCCGCGGGCCCCGCGCTCGAGGACGCGCTCGTGGCCAAGCGCAACT
GGCCGGGCATCAAGCTCGCCGTCGCGCACGCGGAGAACCCTGCGTGGGCG
GGTCGCGGAACGGTCCCGGATGGTTCCAAGGCGTACCTCCCGTGCTACAC
GCGCCACGGCGCCAACATGCGCGGCGCGGCGCTGTGCCGCCTCGCGCACG
GGTTCGGGCAGCACCGCGCCGTGCGGCCGCTGCGCCGCGTCGCGACGGCA
GCAGGCGGCGCCCGCGCCGGCAACACCAAGACAGCAGCGCCGCCATCGCA
GCGCAGCGGCGGCGGCGCGCCCTCGCCACGCAGCGCGGCGCGGGCGGGGG
ACGGCAGCAGCGGCGGTGGCGGCGGCGGCAGCGGCGAGGAATTCTTGGAG
CACGTTCCGTTCTGCGGCGCGCGCTTCGCCTTCTACAGCGGGCAGTTCCA
CGAGGGCACGCGCACGGGCGCGGGCGTGCTGTACGGTGAGGGCGGGGCGC
TGTGGGGGGCGTTCGAGGGGGGGCACGCGCGCGGCGCGTGCGGCGAGCAC
CGTTCCGACGGAACGCGCCTCGCGGGGGACTGGTCCGCGGCGGCGCGCCT
TCCGGTGGAACCTTCCAACCCGTACGCGATCGGCGTTCTGGATGGGGCCG
CGCGCATCGTCTTCCCCGACGGCGCCGTCTACGAAGGTGAAGTTTCCGCG
GGGAGGGTCTCGGGGGAGGGGACGTACTGCGGGCCTGGGGGGGAGATCAC
GACGGGGACGTTTGTAGATGGGGTGCTGGAGGGCTGGGGGGAGCACCAGG
ACACGCTTGGAACGGTCTGGGAAGGTTCCTGGAGGAACGGCGCGCTGCAC
GGTCAGGGGCGCGTCGCCAGCGCCAAGTGGGGGTCGTACGCGGGGGACTG
GGAGGGGGGGGTGCGGTGCGGCAAGGGGACGGCGGTGCTGCGGGATGGGT
CCATGCACACGGGGTTTTATCTGGATGGGGAGCGCTGCGGTCCGGGCGTG
CTGCGGCGCGGCAACGTGAAGACGGTGTACGACGCGCACACGGGGGGGCA
GCGGCCCATGGCTAACAGGGTGTACGAGGGCACATTCAGGGGGGGCGGCC
TCGAGGGCGGCGGCGCCGTGACCGTACACCGCACGCGCCGCATGCACTGC
GTCGCGGCGCGCGAGGGGGACAGGTGGGGGCGCGGCGCGGTGCGGACGGC
GCGGCGGGAGGCAGCGGCGCGGCGCGCGGCGGCGGCGCGGCGCGAGTTCC
TGGCGCGGCTGGAGGCGCTCGTGCGCGCGACGGCGGAGGCGGAGAAGCGG
CGCGTGGCACGCAAGCAGGTGCGGCGCGCTGAAGCCGACATTGTGGCCGA
CTACCATGAGCCCTTGACGCTGGAGCACGTCCGCTCGGTGAGTGCCAAGT
CGACTTCAGCATCAAGTTGTTGA