Trimin1|349630|estExt_Genemark1.C_Ctg_460089 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|349630
Unique NameTrimin1|349630|estExt_Genemark1.C_Ctg_460089
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length344
Homology
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BLAST of jgi.p|Trimin1|349630 vs. uniprot
Match: A0A835YRM3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRM3_9STRA)

HSP 1 Score: 587 bits (1513), Expect = 3.130e-210
Identity = 343/343 (100.00%), Postives = 343/343 (100.00%), Query Frame = 0 
Query:    1 MDSGESILIKADNLTASDPIVDLHIADTRLANRDVCHEYSQCLLDAVLSSASGXXXXXXXXAASVLPADPEGIVQLARDAGDHSLLVVRANAIAHHFSLEVVCAPSPXXXXXXXXXXXXXXXXXXXXXXXXRVYARLLQADIRLIVTSGMRDVQKGFTPKDWLSSSGSAWMNEKQLLNFLTKLQRLRVLVTALSEGDLKDCAESLGYTSLAAQRAWAAAVTAPARLKRDGLTLQPGQLDNCASYREEMVRSGYPAHMVVYGGVTSGAPQQLLDFPLDAGEAILRAYLDLFSSDVTAALFVRAVEFRRSDAAWSCVAVGVPPPLPSRESGGAAAAAGDAAVPGM 343
            MDSGESILIKADNLTASDPIVDLHIADTRLANRDVCHEYSQCLLDAVLSSASGXXXXXXXXAASVLPADPEGIVQLARDAGDHSLLVVRANAIAHHFSLEVVCAPSPXXXXXXXXXXXXXXXXXXXXXXXXRVYARLLQADIRLIVTSGMRDVQKGFTPKDWLSSSGSAWMNEKQLLNFLTKLQRLRVLVTALSEGDLKDCAESLGYTSLAAQRAWAAAVTAPARLKRDGLTLQPGQLDNCASYREEMVRSGYPAHMVVYGGVTSGAPQQLLDFPLDAGEAILRAYLDLFSSDVTAALFVRAVEFRRSDAAWSCVAVGVPPPLPSRESGGAAAAAGDAAVPGM
Sbjct:    1 MDSGESILIKADNLTASDPIVDLHIADTRLANRDVCHEYSQCLLDAVLSSASGXXXXXXXXAASVLPADPEGIVQLARDAGDHSLLVVRANAIAHHFSLEVVCAPSPXXXXXXXXXXXXXXXXXXXXXXXXRVYARLLQADIRLIVTSGMRDVQKGFTPKDWLSSSGSAWMNEKQLLNFLTKLQRLRVLVTALSEGDLKDCAESLGYTSLAAQRAWAAAVTAPARLKRDGLTLQPGQLDNCASYREEMVRSGYPAHMVVYGGVTSGAPQQLLDFPLDAGEAILRAYLDLFSSDVTAALFVRAVEFRRSDAAWSCVAVGVPPPLPSRESGGAAAAAGDAAVPGM 343
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349630 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YRM3_9STRA3.130e-210100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_46contigContig_46:567509..569553 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349630mRNA_4642Tribonema minus UTEX_B_3156 mRNAContig_46 567403..569553 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|349630|estExt_Genemark1.C_Ctg_460089 ID=Trimin1|349630|estExt_Genemark1.C_Ctg_460089|Name=jgi.p|Trimin1|349630|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=344bp
MDSGESILIKADNLTASDPIVDLHIADTRLANRDVCHEYSQCLLDAVLSS
ASGGRRSSPPPAASVLPADPEGIVQLARDAGDHSLLVVRANAIAHHFSLE
VVCAPSPPPPPSAATSAAAEQQGPEAQQRRRRVYARLLQADIRLIVTSGM
RDVQKGFTPKDWLSSSGSAWMNEKQLLNFLTKLQRLRVLVTALSEGDLKD
CAESLGYTSLAAQRAWAAAVTAPARLKRDGLTLQPGQLDNCASYREEMVR
SGYPAHMVVYGGVTSGAPQQLLDFPLDAGEAILRAYLDLFSSDVTAALFV
RAVEFRRSDAAWSCVAVGVPPPLPSRESGGAAAAAGDAAVPGM*
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