Trimin1|349626|estExt_Genemark1.C_Ctg_460083 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|349626
Unique NameTrimin1|349626|estExt_Genemark1.C_Ctg_460083
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length114
Homology
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BLAST of jgi.p|Trimin1|349626 vs. uniprot
Match: A0A836CBJ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBJ9_9STRA)

HSP 1 Score: 229 bits (583), Expect = 4.640e-76
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0 
Query:    1 MLDQQVHALNRPTQPQRGHEAPRPHLHFRIDRMLAWDILEAPERPLVIVQLCALLQQPRDTPYAALQRAYRAQVKRCHPDVLAPDADAEAAIAHFHALVAAWDRALPALKRGG 113
            MLDQQVHALNRPTQPQRGHEAPRPHLHFRIDRMLAWDILEAPERPLVIVQLCALLQQPRDTPYAALQRAYRAQVKRCHPDVLAPDADAEAAIAHFHALVAAWDRALPALKRGG
Sbjct:    1 MLDQQVHALNRPTQPQRGHEAPRPHLHFRIDRMLAWDILEAPERPLVIVQLCALLQQPRDTPYAALQRAYRAQVKRCHPDVLAPDADAEAAIAHFHALVAAWDRALPALKRGG 113
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349626 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CBJ9_9STRA4.640e-76100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036869Chaperone J-domain superfamilyGENE3D1.10.287.110DnaJ domaincoord: 49..109
e-value: 1.9E-5
score: 26.7
IPR036869Chaperone J-domain superfamilySUPERFAMILY46565Chaperone J-domaincoord: 49..104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
IPR001623DnaJ domainCDDcd06257DnaJcoord: 53..103
e-value: 2.92165E-5
score: 36.7545

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_46contigContig_46:540589..541016 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349626mRNA_4636Tribonema minus UTEX_B_3156 mRNAContig_46 540583..541016 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|349626|estExt_Genemark1.C_Ctg_460083 ID=Trimin1|349626|estExt_Genemark1.C_Ctg_460083|Name=jgi.p|Trimin1|349626|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=114bp
MLDQQVHALNRPTQPQRGHEAPRPHLHFRIDRMLAWDILEAPERPLVIVQ
LCALLQQPRDTPYAALQRAYRAQVKRCHPDVLAPDADAEAAIAHFHALVA
AWDRALPALKRGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036869J_dom_sf
IPR001623DnaJ_domain