Trimin1|166761|e_gw1.46.60.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|166761
Unique NameTrimin1|166761|e_gw1.46.60.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length305
Homology
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BLAST of jgi.p|Trimin1|166761 vs. uniprot
Match: A0A835YRV8_9STRA (Armadillo-type protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRV8_9STRA)

HSP 1 Score: 110 bits (276), Expect = 9.010e-25
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0 
Query:    1 MRQYAEQTTGSPQAAGEIVAAMQAHVPNSEVQQHGAWAVAILAAKNDENRRTXXXXXXXXXXXXXXXXXXXXXXXXXXXLVAVVNLAAN 89
            MRQYAEQTTGSPQAAGEIVAAMQAHVPNSEVQQHGAWAVAILAAKNDENRRTXXXXXXXXXXXXXXXXXXXXXXXXXXXLVAVVNLAAN
Sbjct:    1 MRQYAEQTTGSPQAAGEIVAAMQAHVPNSEVQQHGAWAVAILAAKNDENRRTXXXXXXXXXXXXXXXXXXXXXXXXXXXLVAVVNLAAN 89
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|166761 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YRV8_9STRA9.010e-25100.00Armadillo-type protein (Fragment) n=1 Tax=Tribonem... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000225ArmadilloSMARTSM00185arm_5coord: 133..175
e-value: 0.046
score: 22.9
coord: 264..305
e-value: 170.0
score: 3.7
coord: 46..88
e-value: 86.0
score: 6.0
coord: 89..131
e-value: 5.8
score: 15.1
coord: 177..219
e-value: 0.058
score: 22.5
coord: 221..263
e-value: 410.0
score: 0.8
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 144..188
score: 9.1174
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 188..232
score: 8.8724
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 100..144
score: 8.8024
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 7..201
e-value: 4.3E-31
score: 109.9
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 202..305
e-value: 3.5E-12
score: 48.2
NoneNo IPR availablePANTHERPTHR22895:SF7PROTEIN AARDVARKcoord: 131..219
NoneNo IPR availablePANTHERPTHR22895UNCHARACTERIZEDcoord: 17..131
NoneNo IPR availablePANTHERPTHR22895:SF7PROTEIN AARDVARKcoord: 17..131
NoneNo IPR availablePANTHERPTHR22895UNCHARACTERIZEDcoord: 131..219
coord: 219..305
NoneNo IPR availablePANTHERPTHR22895:SF7PROTEIN AARDVARKcoord: 219..305
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 27..305

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_46contigContig_46:407878..408792 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|166761mRNA_4610Tribonema minus UTEX_B_3156 mRNAContig_46 407878..408792 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|166761|e_gw1.46.60.1 ID=Trimin1|166761|e_gw1.46.60.1|Name=jgi.p|Trimin1|166761|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=305bp
MRQYAEQTTGSPQAAGEIVAAMQAHVPNSEVQQHGAWAVAILAAKNDENR
RTLGSAGACAAVLGAMQAHLSSSEVQHRGLVAVVNLAANDDNGRTLGSAG
ACAAVVGAMQAHVSNSEVRQYGAWAVANLAANNDDNRRTLGSAGACAAVV
GAMQAHVSNSEVQQYGAWAVANLAANNDDNRRTLGSAGACAAVVGAMQAH
LSSSEVQQYGAWAVANLAANNDDNRRTLGSAGACAAVLGAMQAHLSSSEV
QHRGLVAVVILAANDENGRTLGSAGVCAAVVGAMQAHVSNSEVQQYGAWA
VANLA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000225Armadillo
IPR011989ARM-like
IPR016024ARM-type_fold