Trimin1|349572|estExt_Genemark1.C_Ctg_450098 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|349572
Unique NameTrimin1|349572|estExt_Genemark1.C_Ctg_450098
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length97
Homology
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BLAST of jgi.p|Trimin1|349572 vs. uniprot
Match: A0A835YS88_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS88_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 1.230e-22
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0 
Query:    1 AAAVIPFPTCLQRRRSRDVDGRCGRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGRDGRLSXXXXXXXXXXVTGLPAAAGQLAKWSR 96
            AAAVIPFPTCLQRRRSRDVDGRCGRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGRDGRLSXXXXXXXXXXVTGLPAAAGQLAKWSR
Sbjct:    1 AAAVIPFPTCLQRRRSRDVDGRCGRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGRDGRLSXXXXXXXXXXVTGLPAAAGQLAKWSR 96
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349572 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YS88_9STRA1.230e-22100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_45contigContig_45:764548..765467 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349572mRNA_6138Tribonema minus UTEX_B_3156 mRNAContig_45 764401..765469 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|349572|estExt_Genemark1.C_Ctg_450098 ID=Trimin1|349572|estExt_Genemark1.C_Ctg_450098|Name=jgi.p|Trimin1|349572|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=97bp
AAAVIPFPTCLQRRRSRDVDGRCGRGGGSGAGCQAREQAAVRSAAGRGRT
RARAQQRRYRSSSGRDGRLSAAAAAAAAAAVTGLPAAAGQLAKWSR*
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