mRNA_6090 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|349547
Unique NamemRNA_6090
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
[Close]
BLAST of jgi.p|Trimin1|349547 vs. uniprot
Match: A0A835YS56_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS56_9STRA)

HSP 1 Score: 1084 bits (2803), Expect = 0.000e+0
Identity = 638/638 (100.00%), Postives = 638/638 (100.00%), Query Frame = 1 
Query:    1 MADVTGALSGKFSDDFCPQLIVQCMNRVADLHCRFHGDLRGWNDTEEEEEQPLSHADGDTEAGDDSDAVEGDAPGGEXXXXXADDDXXXXXXXWGERRRKHAQRKRATGAAQAANGLKVLVTVALVVLIVIEVFKRCDAKTLISLAGFLVYAFGLYQKAGGGGGVRMRMGFDVKAAEIGKRHFSFELMNYEFSKDKAALRVAEKQAAAAGAAPTPKQGEAPAAHNVEEMLKSVMAGNKDAAKTNEARKKASPSAKDTPRERVVMWVKQHVFGSGGGGGYDDGDAKHADXXXXXXXXXXXXXXGEAQKPSEGLADKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAKPQRKPHVYVLEFTPQQMLAGISAYLADAASFLIDAADPATDEVVILLTSPGGGVSEYGLATSHLERIRDAGIKLTVCVDTIAASGGYMMAVVASHLVAAPFAMVGSIGVRGGLLNFNKALRERGVESILLTAGKYKAPLTSFNEDAFKAHIKRHRPQIDVDAVGTGEVWLGVYAESHGLVDEVGTSAQYLRRRMTDGGAEVLRLVKYEQPRSMELGLLRKSLLGPFAMVSVMFARMGRLLQAAEIALGTSHAVTDGQSQVAQAVPGPQPMLQYDGSTPALQYQW 1914
            MADVTGALSGKFSDDFCPQLIVQCMNRVADLHCRFHGDLRGWNDTEEEEEQPLSHADGDTEAGDDSDAVEGDAPGGEXXXXXADDDXXXXXXXWGERRRKHAQRKRATGAAQAANGLKVLVTVALVVLIVIEVFKRCDAKTLISLAGFLVYAFGLYQKAGGGGGVRMRMGFDVKAAEIGKRHFSFELMNYEFSKDKAALRVAEKQAAAAGAAPTPKQGEAPAAHNVEEMLKSVMAGNKDAAKTNEARKKASPSAKDTPRERVVMWVKQHVFGSGGGGGYDDGDAKHADXXXXXXXXXXXXXXGEAQKPSEGLADKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAKPQRKPHVYVLEFTPQQMLAGISAYLADAASFLIDAADPATDEVVILLTSPGGGVSEYGLATSHLERIRDAGIKLTVCVDTIAASGGYMMAVVASHLVAAPFAMVGSIGVRGGLLNFNKALRERGVESILLTAGKYKAPLTSFNEDAFKAHIKRHRPQIDVDAVGTGEVWLGVYAESHGLVDEVGTSAQYLRRRMTDGGAEVLRLVKYEQPRSMELGLLRKSLLGPFAMVSVMFARMGRLLQAAEIALGTSHAVTDGQSQVAQAVPGPQPMLQYDGSTPALQYQW
Sbjct:    1 MADVTGALSGKFSDDFCPQLIVQCMNRVADLHCRFHGDLRGWNDTEEEEEQPLSHADGDTEAGDDSDAVEGDAPGGEXXXXXADDDXXXXXXXWGERRRKHAQRKRATGAAQAANGLKVLVTVALVVLIVIEVFKRCDAKTLISLAGFLVYAFGLYQKAGGGGGVRMRMGFDVKAAEIGKRHFSFELMNYEFSKDKAALRVAEKQAAAAGAAPTPKQGEAPAAHNVEEMLKSVMAGNKDAAKTNEARKKASPSAKDTPRERVVMWVKQHVFGSGGGGGYDDGDAKHADXXXXXXXXXXXXXXGEAQKPSEGLADKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAKPQRKPHVYVLEFTPQQMLAGISAYLADAASFLIDAADPATDEVVILLTSPGGGVSEYGLATSHLERIRDAGIKLTVCVDTIAASGGYMMAVVASHLVAAPFAMVGSIGVRGGLLNFNKALRERGVESILLTAGKYKAPLTSFNEDAFKAHIKRHRPQIDVDAVGTGEVWLGVYAESHGLVDEVGTSAQYLRRRMTDGGAEVLRLVKYEQPRSMELGLLRKSLLGPFAMVSVMFARMGRLLQAAEIALGTSHAVTDGQSQVAQAVPGPQPMLQYDGSTPALQYQW 638
[Close]
BLAST of jgi.p|Trimin1|349547 vs. uniprot
Match: D7G353_ECTSI (Putative periplasmic protease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G353_ECTSI)

HSP 1 Score: 195 bits (496), Expect = 1.550e-48
Identity = 114/256 (44.53%), Postives = 163/256 (63.67%), Query Frame = 1 
Query: 1060 KPQRKPHVYVLEF----TPQQMLAGISAYLADAASFLIDAADPATDEVVILLTSPGGGVSEYGLATSHLERIRDAGIKLTVCVDTIAASGGYMMAVVASHLVAAPFAMVGSIGVRGGLLNFNKALRERGVESILLTAGKYKAPLTSFNE-----------------DAFKAHIKRHRPQIDVDAVGTGEVWLGVYAESHGLVDEVGTSAQYLRRRMTDGGAEVLRLVKYEQPRSMELGLLRKSLLGPFAMVSVMFA 1764
            KPQ++  V+V+ F    +P+  +      L++  SFL+   +  TDEVV++L SPGG V+E+GLA + L R++D G +LTVCVD +AASGGYM+A +A  L  APFAM+GSIGV GG+ NFNKAL++ GV+    T+G++K+ +  F E                  AFK H+ R+RP +D++AVGTGE+WLG  A    L D+V T+ +YL+ RMTD  A+V  +  +++  +   GLLR+ LLGP A VS  FA
Sbjct:  528 KPQKR--VFVVSFRPGHSPEATMQKEMDLLSETVSFLVAHGNTTTDEVVVVLESPGGEVTEFGLAAARLARLKDRGFRLTVCVDKVAASGGYMIACIADELTTAPFAMLGSIGVVGGMTNFNKALKKYGVDYFHFTSGQHKSLVGPFQEVTKENKAMQQKQMDAIHSAFKTHVHRYRPSVDIEAVGTGEIWLGQRAVDMRLADKVTTAMEYLQGRMTD--AQVFLVKPHKKKMAAGSGLLRELLLGPLA-VSGRFA 778
[Close]
BLAST of jgi.p|Trimin1|349547 vs. uniprot
Match: A0A6H5KTD1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTD1_9PHAE)

HSP 1 Score: 186 bits (472), Expect = 3.020e-47
Identity = 108/251 (43.03%), Postives = 157/251 (62.55%), Query Frame = 1 
Query: 1060 KPQRKPHVYVLEF----TPQQMLAGISAYLADAASFLIDAADPATDE--VVILLTSPGGGVSEYGLATSHLERIRDAGIKLTVCVDTIAASGGYMMAVVASHLVAAPFAMVGSIGVRGGLLNFNKALRERGVESILLTAGKYKAPLTSFNE-----------------DAFKAHIKRHRPQIDVDAVGTGEVWLGVYAESHGLVDEVGTSAQYLRRRMTDGGAEVLRLVKYEQPRSMELGLLRKSLLGPFA 1743
            KPQ++  V+V+ F    +P+  +      L++  SFL+   +  TDE  VV++L SPGG V+E+GLA + L R++D G +LTVCVD +AASGGYMMA +A  L  APFAM+GSIGV GG+ NFNKAL++ GV+    T+G++K+ +  F E                  AFK H+ R+RP +D++AVGTGE+WLG  A    L D+V T+ +YL+ RM+D  A+V  +  +++  +    LLR+ L GP A
Sbjct:  154 KPQKR--VFVVSFRPGHSPEATMQKEMDLLSETVSFLVAHGNTTTDEASVVVVLESPGGEVTEFGLAAARLARLKDRGFRLTVCVDKVAASGGYMMACIADELTTAPFAMLGSIGVVGGMANFNKALKKYGVDYFQFTSGQHKSLVGPFQEVTKENKAMQQKQMDAIHTAFKTHVHRYRPSVDIEAVGTGEIWLGQRAVEMHLADKVTTAMEYLQGRMSD--AQVFLVKPHKKKMAAGSSLLRELLFGPLA 400
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BLAST of jgi.p|Trimin1|349547 vs. uniprot
Match: A0A357F6V7_9DELT (Protease SohB n=6 Tax=root TaxID=1 RepID=A0A357F6V7_9DELT)

HSP 1 Score: 180 bits (456), Expect = 2.400e-46
Identity = 99/207 (47.83%), Postives = 133/207 (64.25%), Query Frame = 1 
Query: 1081 VYVLEFTPQQMLAGISAYLADAASFLIDAADPATDEVVILLTSPGGGVSEYGLATSHLERIRDAGIKLTVCVDTIAASGGYMMAVVASHLVAAPFAMVGSIGVRGGLLNFNKALRERGVESILLTAGKYKAPLTSFNE-----------------DAFKAHIKRHRPQIDVDAVGTGEVWLGVYAESHGLVDEVGTSAQYLRRRMTD 1650
            VYVL F    M + +   L +  SFL+  A P TDE+V+ +TSPGG V +YGLA+S LER++ AG++  VCVDT+AASGGYMMA VA  ++AAPFA++GSIGV  G+ NF++ L++  V+  L TAGKYK  +T F+E                  AFK HIK  RP +D++A+ TGE WL   A+  GLVDE+ TS  YL  ++ D
Sbjct:  136 VYVLTFIGNIMASEVEQ-LREQISFLLQVAQP-TDEIVVRITSPGGAVPQYGLASSQLERLKQAGLRCVVCVDTVAASGGYMMASVADKIIAAPFAIIGSIGVVAGIPNFHRVLQKNEVDYHLFTAGKYKRTVTPFSEVTDEGKQKLQDDLTAIHKAFKQHIKDGRPDVDIEAIATGEYWLASQAKEKGLVDEIMTSDDYLCSKLDD 340
[Close]
BLAST of jgi.p|Trimin1|349547 vs. uniprot
Match: A0A382DYD4_9ZZZZ (Uncharacterized protein n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382DYD4_9ZZZZ)

HSP 1 Score: 179 bits (455), Expect = 2.520e-46
Identity = 100/207 (48.31%), Postives = 134/207 (64.73%), Query Frame = 1 
Query: 1081 VYVLEFTPQQMLAGISAYLADAASFLIDAADPATDEVVILLTSPGGGVSEYGLATSHLERIRDAGIKLTVCVDTIAASGGYMMAVVASHLVAAPFAMVGSIGVRGGLLNFNKALRERGVESILLTAGKYKAPLTSFNE-----------------DAFKAHIKRHRPQIDVDAVGTGEVWLGVYAESHGLVDEVGTSAQYLRRRMTD 1650
            VYVL F    M A +  +L D  SFL++ A PA DE+VI LTSPGG V +YGLA+S LER++ AG++  VCVDT+AASGGYMMA VA  ++AAPFA++GSIGV  G+ NF++ L++  V+  L TAGKYK  +T F++                 DAFK  IK  RP +D++ + TGE WL   A+  GLVDE+ TS  YL  ++ +
Sbjct:  125 VYVLTFIGNIMAAEVE-HLRDQISFLLEIAQPA-DEIVIRLTSPGGAVPQYGLASSQLERLKQAGLRCVVCVDTVAASGGYMMAAVADKIIAAPFAIIGSIGVVAGIPNFHRVLQKNEVDYHLFTAGKYKRTVTPFSKVTKEGKQKVQDDISAIHDAFKKVIKEGRPDVDIEEIATGEYWLASQAKEKGLVDEIMTSDDYLCSKLDE 329
[Close]
BLAST of jgi.p|Trimin1|349547 vs. uniprot
Match: A0A836QDT0_9PROT (Protease SohB n=11 Tax=root TaxID=1 RepID=A0A836QDT0_9PROT)

HSP 1 Score: 178 bits (452), Expect = 6.530e-46
Identity = 102/225 (45.33%), Postives = 138/225 (61.33%), Query Frame = 1 
Query: 1081 VYVLEFTPQQMLAGISAYLADAASFLIDAADPATDEVVILLTSPGGGVSEYGLATSHLERIRDAGIKLTVCVDTIAASGGYMMAVVASHLVAAPFAMVGSIGVRGGLLNFNKALRERGVESILLTAGKYKAPLTSFNE-----------------DAFKAHIKRHRPQIDVDAVGTGEVWLGVYAESHGLVDEVGTSAQYLRRRMTDGGAEVLRLVKYEQPRSME 1704
            VYVL F    M + +   L D  SFL+  A PA DE+V+ LTSPGG V +YGLA+S LER++ AG++  VCVDT+AASGGYMMA VA  ++AAPFA++GSIGV  G+ NF++ L++  V+  L TAGKYK  +T F E                 +AFK  IK  RP +D++ + TGE WL   A+  GLVDE+ TS  YL  ++ D   EV+ +    +   +E
Sbjct:  125 VYVLTFIGSIMASEVEQ-LRDQISFLLQIAQPA-DEIVVRLTSPGGAVPQYGLASSQLERLKQAGLRCVVCVDTVAASGGYMMAAVADKIIAAPFAIIGSIGVVAGIPNFHRVLQKNEVDYHLFTAGKYKRTVTPFTEVTDEGKQKLQDDITAIHEAFKRLIKEGRPDVDIEEIATGEYWLASQAKEKGLVDEIMTSDDYLGSKLDD--CEVIEITTETEQNRLE 345
[Close]
BLAST of jgi.p|Trimin1|349547 vs. uniprot
Match: A0A7Z9LUT4_9PROT (Protease SohB n=3 Tax=Proteobacteria TaxID=1224 RepID=A0A7Z9LUT4_9PROT)

HSP 1 Score: 177 bits (450), Expect = 1.230e-45
Identity = 99/207 (47.83%), Postives = 133/207 (64.25%), Query Frame = 1 
Query: 1081 VYVLEFTPQQMLAGISAYLADAASFLIDAADPATDEVVILLTSPGGGVSEYGLATSHLERIRDAGIKLTVCVDTIAASGGYMMAVVASHLVAAPFAMVGSIGVRGGLLNFNKALRERGVESILLTAGKYKAPLTSFNE-----------------DAFKAHIKRHRPQIDVDAVGTGEVWLGVYAESHGLVDEVGTSAQYLRRRMTD 1650
            VYVL F    M + +   L D  SFL+  A PA DE+V+ LTSPGG V +YGLA+S LER++ AG++  VCVDT+AASGGYMMA VA  ++AAPFA++GSIGV  G+ NF++ L++  V+  L TAGKYK  +T F+E                 +AFK  IK  RP +D++A+ TGE WL   A+  GLVDE+ TS  YL  ++ +
Sbjct:  125 VYVLTFIGSIMASEVEQ-LRDQISFLLQIAQPA-DEIVVRLTSPGGAVPQYGLASSQLERLKQAGLRCVVCVDTVAASGGYMMAAVADKIIAAPFAIIGSIGVVAGIPNFHRVLQKNEVDYHLFTAGKYKRTVTPFSEVTEEGKQKLQDDLTAIHEAFKKLIKEGRPDVDIEAIATGEYWLASEAKEKGLVDEIMTSDDYLCSKLDE 329
[Close]
BLAST of jgi.p|Trimin1|349547 vs. uniprot
Match: A0A2E5PWB2_9DELT (Protease SohB n=3 Tax=Proteobacteria TaxID=1224 RepID=A0A2E5PWB2_9DELT)

HSP 1 Score: 173 bits (439), Expect = 3.710e-44
Identity = 104/230 (45.22%), Postives = 139/230 (60.43%), Query Frame = 1 
Query: 1081 VYVLEFTPQQMLAGISAYLADAASFLIDAADPATDEVVILLTSPGGGVSEYGLATSHLERIRDAGIKLTVCVDTIAASGGYMMAVVASHLVAAPFAMVGSIGVRGGLLNFNKALRERGVESILLTAGKYKAPLTSFNE-----------------DAFKAHIKRHRPQIDVDAVGTGEVWLGVYAESHGLVDEVGTSAQYLRRRMTDGGAEVLRLVKYEQPRSMELGLLR 1719
            +YVL+F+   M + +  +  D  SFL+  A P TDEVVI L+SPGG V  YGLA+S + R+R   +K TVCVD +AASGGYMMA VA  +VAAPFA++GSIGV  GL NF++ L++  V+  L TAGKYK  +T   E                 ++FK  I  HR +ID++ V TGE WL   A+  GLVDE+ TS  YL  +M D   E++  +  E PR+    LL+
Sbjct:  126 IYVLDFSGNIMASQLDQF-RDEISFLLQVAQP-TDEVVIRLSSPGGAVPNYGLASSQIARLRQRNLKCTVCVDLVAASGGYMMAAVADKIVAAPFAIIGSIGVVAGLPNFHRVLKKHEVDYYLFTAGKYKRTVTPLGEVTEEGQEKMQQDLEAIHESFKKLISDHRTEIDIEEVATGEFWLAQEAKEKGLVDEIQTSDDYLFNKMKD--FEIIE-ISTEDPRNRXEKLLQ 350
[Close]
BLAST of jgi.p|Trimin1|349547 vs. uniprot
Match: A0A1H2HS34_9PSED (Inner membrane peptidase. Serine peptidase. MEROPS family S49 n=1 Tax=Pseudomonas guangdongensis TaxID=1245526 RepID=A0A1H2HS34_9PSED)

HSP 1 Score: 170 bits (431), Expect = 1.960e-43
Identity = 103/230 (44.78%), Postives = 142/230 (61.74%), Query Frame = 1 
Query: 1066 QRKPHVYVLEFTPQQMLAGISAYLADAASFLIDAADPATDEVVILLTSPGGGVSEYGLATSHLERIRDAGIKLTVCVDTIAASGGYMMAVVASHLVAAPFAMVGSIGVRGGLLNFNKALRERGVESILLTAGKYKAPLTSFNEDA-----------------FKAHIKRHRPQIDVDAVGTGEVWLGVYAESHGLVDEVGTSAQYLRRRMTDGGAEVLRLVKYEQPRSME 1704
            + KP VYVL+F    + A    +L    + L+  A P  DEVV+ L S GG V  YGLA+S L RIR AG+ LTVCVD +AASGGYMMA +   ++AAPFA++GSIGV   L NF++ L++  ++  +LTAG+YK  LT F E+                  FK  + R+RPQ+D+DAV TGEVWLG  A    LVDE+ TS +YL +R  +  AE+ +L +Y + +S++
Sbjct:   87 RHKPRVYVLDFDGD-IKASAGEHLRHEVTALLSIATP-EDEVVVRLESGGGMVHSYGLASSQLARIRQAGVPLTVCVDKVAASGGYMMACIGDKILAAPFAILGSIGVVAQLPNFHRLLKKHAIDFEVLTAGEYKRTLTVFGENTDKGREKFQEDLEITHGLFKDFVARYRPQLDIDAVATGEVWLGQAALGQQLVDELQTSDEYLSQRARE--AELFQL-RYHEKKSLQ 311
[Close]
BLAST of jgi.p|Trimin1|349547 vs. uniprot
Match: A0A7X0BVU4_9PSED (Serine protease SohB n=3 Tax=Pseudomonas TaxID=286 RepID=A0A7X0BVU4_9PSED)

HSP 1 Score: 169 bits (429), Expect = 3.690e-43
Identity = 100/223 (44.84%), Postives = 137/223 (61.43%), Query Frame = 1 
Query: 1060 KPQRKPHVYVLEFTPQQMLAGISAYLADAASFLIDAADPATDEVVILLTSPGGGVSEYGLATSHLERIRDAGIKLTVCVDTIAASGGYMMAVVASHLVAAPFAMVGSIGVRGGLLNFNKALRERGVESILLTAGKYKAPLTSFNEDA-----------------FKAHIKRHRPQIDVDAVGTGEVWLGVYAESHGLVDEVGTSAQYLRRRMTDGGAEVLRLV 1677
            KP  KP V+VL+F    + A  +  L    + ++  A P +DEVV+ L S GG V  YGLA+S L R+RDAG+ LTVCVD +AASGGYMMA VA+ ++AAPFA++GSIGV   L N ++ L++  ++  +LTAG++K  LT F E+                  FK  + R+RPQ+D+D V TGEVWLG+ A  H LVD + TS +YL RR  +     LR +
Sbjct:   85 KPVDKPRVFVLDFDGD-IKASATEQLRHEVTAVLSMAQP-SDEVVVRLESGGGMVHAYGLASSQLARLRDAGLPLTVCVDKVAASGGYMMACVANRVLAAPFAVLGSIGVVAQLPNVHRLLKKHDIDVEVLTAGEFKRTLTVFGENTEKGREKFQEDLELTHQLFKGFVSRYRPQLDIDKVATGEVWLGLSALEHELVDALQTSDEYLARRANEAELFQLRFI 305
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349547 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YS56_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G353_ECTSI1.550e-4844.53Putative periplasmic protease n=1 Tax=Ectocarpus s... [more]
A0A6H5KTD1_9PHAE3.020e-4743.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A357F6V7_9DELT2.400e-4647.83Protease SohB n=6 Tax=root TaxID=1 RepID=A0A357F6V... [more]
A0A382DYD4_9ZZZZ2.520e-4648.31Uncharacterized protein n=1 Tax=marine metagenome ... [more]
A0A836QDT0_9PROT6.530e-4645.33Protease SohB n=11 Tax=root TaxID=1 RepID=A0A836QD... [more]
A0A7Z9LUT4_9PROT1.230e-4547.83Protease SohB n=3 Tax=Proteobacteria TaxID=1224 Re... [more]
A0A2E5PWB2_9DELT3.710e-4445.22Protease SohB n=3 Tax=Proteobacteria TaxID=1224 Re... [more]
A0A1H2HS34_9PSED1.960e-4344.78Inner membrane peptidase. Serine peptidase. MEROPS... [more]
A0A7X0BVU4_9PSED3.690e-4344.84Serine protease SohB n=3 Tax=Pseudomonas TaxID=286... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_45contigContig_45:469173..482723 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|349547|estExt_Genemark1.C_Ctg_450059
DescriptionPeptidase family S49 N-terminal
COG categoryOU
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0616@1|root,2R7CR@2759|Eukaryota
Evalue3.62e-50
Seed ortholog2880.D7G353
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPeptidase S49, N-terminal proteobacteria
Ec32 orthologEc-03_004530.1
TranscriptId349869
TrackFilteredModels1
ProteinId349547
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349547gene_6090Tribonema minus UTEX_B_3156 geneContig_45 469173..482723 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349547Trimin1|349547|estExt_Genemark1.C_Ctg_450059Tribonema minus UTEX_B_3156 polypeptideContig_45 469173..482304 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_6090_1exon_6090_1Tribonema minus UTEX_B_3156 exonContig_45 469173..469188 +
exon_6090_2exon_6090_2Tribonema minus UTEX_B_3156 exonContig_45 469595..469687 +
exon_6090_3exon_6090_3Tribonema minus UTEX_B_3156 exonContig_45 470739..470965 +
exon_6090_4exon_6090_4Tribonema minus UTEX_B_3156 exonContig_45 472046..472119 +
exon_6090_5exon_6090_5Tribonema minus UTEX_B_3156 exonContig_45 472800..472863 +
exon_6090_6exon_6090_6Tribonema minus UTEX_B_3156 exonContig_45 473622..473729 +
exon_6090_7exon_6090_7Tribonema minus UTEX_B_3156 exonContig_45 474666..474731 +
exon_6090_8exon_6090_8Tribonema minus UTEX_B_3156 exonContig_45 475412..475465 +
exon_6090_9exon_6090_9Tribonema minus UTEX_B_3156 exonContig_45 476052..476269 +
exon_6090_10exon_6090_10Tribonema minus UTEX_B_3156 exonContig_45 476525..476672 +
exon_6090_11exon_6090_11Tribonema minus UTEX_B_3156 exonContig_45 477070..477247 +
exon_6090_12exon_6090_12Tribonema minus UTEX_B_3156 exonContig_45 477589..477657 +
exon_6090_13exon_6090_13Tribonema minus UTEX_B_3156 exonContig_45 478203..478258 +
exon_6090_14exon_6090_14Tribonema minus UTEX_B_3156 exonContig_45 478684..478740 +
exon_6090_15exon_6090_15Tribonema minus UTEX_B_3156 exonContig_45 479070..479135 +
exon_6090_16exon_6090_16Tribonema minus UTEX_B_3156 exonContig_45 479979..480071 +
exon_6090_17exon_6090_17Tribonema minus UTEX_B_3156 exonContig_45 480399..480519 +
exon_6090_18exon_6090_18Tribonema minus UTEX_B_3156 exonContig_45 480899..480975 +
exon_6090_19exon_6090_19Tribonema minus UTEX_B_3156 exonContig_45 481779..481817 +
exon_6090_20exon_6090_20Tribonema minus UTEX_B_3156 exonContig_45 482212..482723 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_6090CDS_6090Tribonema minus UTEX_B_3156 CDSContig_45 469173..469188 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_6090UTR3_6090Tribonema minus UTEX_B_3156 three_prime_UTRContig_45 482305..482723 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_6090 ID=mRNA_6090|Name=jgi.p|Trimin1|349547|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2336bp|location=Sequence derived from alignment at Contig_45:469173..482723+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCAGATGTCACAGGGGCCCTCAGTGGCAAGTTCTCCGACGACTTCTG
CCCTCAGCTGATCGTACAGTGTATGAACCGTGTCGCCGACCTGCACTGCA
GGTTCCACGGCGACTTGAGGGGCTGGAACGATACGGAAGAGGAAGAGGAG
CAGCCGCTGAGCCATGCGGACGGCGACACCGAGGCTGGCGATGACTCGGA
CGCTGTCGAGGGTGACGCACCTGGCGGTGAAGGGGAGGGGGGCGATGCTG
ATGATGATGGTGATGCCGAGGACAGGGGGTGGGGGGAGAGACGCAGAAAG
CACGCACAGCGCAAGCGGGCGACGGGCGCAGCACAGGCGGCAAACGGGCT
GAAGGTGCTAGTGACGGTGGCGCTTGTGGTGCTCATAGTCATTGAGGTCT
TCAAGCGATGCGACGCCAAGACGCTCATCAGCCTCGCGGGCTTTTTGGTG
TACGCATTCGGCCTGTACCAGAAGGCCGGCGGCGGCGGCGGCGTGCGCAT
GCGCATGGGCTTCGACGTGAAGGCCGCGGAGATCGGCAAACGGCACTTCT
CGTTCGAGCTGATGAACTACGAGTTCAGCAAGGACAAGGCGGCGCTGCGA
GTCGCAGAGAAGCAAGCGGCAGCGGCAGGGGCGGCGCCCACACCCAAGCA
GGGCGAGGCGCCCGCCGCCCACAACGTCGAGGAGATGCTGAAGAGCGTCA
TGGCCGGCAACAAGGACGCCGCCAAAACAAACGAGGCGCGCAAGAAGGCC
TCGCCCAGTGCCAAGGACACGCCGCGCGAGCGGGTGGTGATGTGGGTCAA
GCAGCACGTGTTCGGCAGCGGCGGCGGCGGCGGCTATGACGACGGCGATG
CTAAGCATGCCGACGGTGGCGGTGACTACGACGGCGCCGCCGCCGCCGTG
GCAGATGGAGAGGCGCAGAAGCCGTCTGAGGGGCTAGCGGACAAAGAGGA
GGGGCAAGCGGACAAAGAGGACGGGCAAGCAGACAAACAGGAGGGGCAAG
CGGACACAGACGCCTCCGCCGCCGAGAACAAAGACGCAGCTGCTGCCACC
GCGGATGCCAAACCGCAGCGCAAGCCCCACGTGTATGTCCTGGAATTCAC
GCCTCAGCAGATGCTGGCCGGCATCAGCGCGTACCTCGCCGACGCGGCGA
GCTTCCTCATCGACGCGGCCGACCCCGCCACCGACGAGGTCGTCATCCTG
CTCACCAGCCCCGGCGGCGGCGTCTCCGAGTATGGCCTGGCGACGTCACA
CCTGGAGAGGATCAGGGACGCCGGCATCAAGCTGACGGTCTGCGTGGACA
CCATCGCGGCCAGCGGAGGGTACATGATGGCGGTCGTCGCATCGCACCTC
GTCGCGGCGCCGTTTGCCATGGTCGGCAGCATAGGCGTCAGGGGCGGCCT
CCTCAACTTCAACAAGGCCCTCAGGGAGCGCGGCGTGGAGAGCATCTTGC
TGACCGCTGGCAAGTACAAGGCGCCGCTGACCTCGTTTAATGAGGACGCC
TTCAAGGCGCACATCAAGCGCCACCGGCCGCAGATCGACGTGGACGCCGT
CGGCACGGGGGAGGTCTGGCTCGGCGTGTATGCAGAGAGCCATGGCCTGG
TGGACGAGGTCGGCACCAGCGCTCAGTACCTGCGGCGCCGCATGACGGAC
GGCGGCGCCGAGGTCCTCAGGCTCGTCAAGTACGAGCAGCCGCGCAGCAT
GGAGCTGGGCCTGCTGAGGAAATCTCTGCTGGGACCGTTCGCCATGGTCA
GCGTGATGTTTGCCAGGATGGGCCGCCTTCTGCAGGCGGCGGAGATTGCG
CTGGGAACATCTCATGCTGTCACGGATGGGCAGAGCCAGGTCGCGCAAGC
CGTCCCAGGACCCCAACCGATGCTCCAATATGACGGGAGCACGCCGGCGC
TCCAATATCAGTGGTAGGGAATGACATGATCAGCGGACACAAGCGGTGCG
CGGATTTCCACACAGCTGCAGCACCTTTGCACCATGCGAGGAGCGGTGCC
TTGTGCTTGTTGAAGCACGCAGTACATACATGCACAGTGCAGGTGGACTC
GCAGTGTACGGCCGGTGACACCAGCGGCTTCACTGAGGCCAGACACCGCC
ACTGCCGCAAACTTGAAGCCACTGCAGTTAGGAGTGCCACAAGCCATGCA
TTTTGGTGCATGACAAGGTCGCTCTGCGCTGCACATTGTATTGTTGCGGT
TCACGGCGCTGGCGCTGTTGATACAGATGCACGCTATGCGCGCTCTCTTT
GCCACACACCGGTGCAGCTTTGAACCCACCGGCCACTGTAAATACAACCT
GTACTGCCTGGTGCACATGCATCCAGCACCCCATCA
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protein sequence of jgi.p|Trimin1|349547

>Trimin1|349547|estExt_Genemark1.C_Ctg_450059 ID=Trimin1|349547|estExt_Genemark1.C_Ctg_450059|Name=jgi.p|Trimin1|349547|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=639bp
MADVTGALSGKFSDDFCPQLIVQCMNRVADLHCRFHGDLRGWNDTEEEEE
QPLSHADGDTEAGDDSDAVEGDAPGGEGEGGDADDDGDAEDRGWGERRRK
HAQRKRATGAAQAANGLKVLVTVALVVLIVIEVFKRCDAKTLISLAGFLV
YAFGLYQKAGGGGGVRMRMGFDVKAAEIGKRHFSFELMNYEFSKDKAALR
VAEKQAAAAGAAPTPKQGEAPAAHNVEEMLKSVMAGNKDAAKTNEARKKA
SPSAKDTPRERVVMWVKQHVFGSGGGGGYDDGDAKHADGGGDYDGAAAAV
ADGEAQKPSEGLADKEEGQADKEDGQADKQEGQADTDASAAENKDAAAAT
ADAKPQRKPHVYVLEFTPQQMLAGISAYLADAASFLIDAADPATDEVVIL
LTSPGGGVSEYGLATSHLERIRDAGIKLTVCVDTIAASGGYMMAVVASHL
VAAPFAMVGSIGVRGGLLNFNKALRERGVESILLTAGKYKAPLTSFNEDA
FKAHIKRHRPQIDVDAVGTGEVWLGVYAESHGLVDEVGTSAQYLRRRMTD
GGAEVLRLVKYEQPRSMELGLLRKSLLGPFAMVSVMFARMGRLLQAAEIA
LGTSHAVTDGQSQVAQAVPGPQPMLQYDGSTPALQYQW*
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mRNA from alignment at Contig_45:469173..482723+

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_6090 ID=mRNA_6090|Name=jgi.p|Trimin1|349547|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=13551bp|location=Sequence derived from alignment at Contig_45:469173..482723+ (Tribonema minus UTEX_B_3156 )
ATGGCAGATGTCACAGGTACGACGCGGCAGCTTACCTGAAGTCAGCTGTG
CCAGCAGTCAGGAATACCTGCGGAAACCCTCTTGTGATCTGCAACAATGA
GCGGCAAGAAGGCATGGTTCTTTTGGATCAGTATCCGCACAGCAGTTGTG
CATCATGGCCTGGGCCATGATGTTGGCTCAGGTCGCTGCATCGTCTGCAC
ATGTCTGCAGCACAAGTCAAGGAGGCAGAACTGCAGACCCTTCCTCGTTG
CACTTGACTTATCGTGTTCATGCTGCAGCAAGCAGAACGCTCAGCAAGCC
AGCGCATGTCCACGTATGACACTGCAGTACAAGTCATCGCCTTCTGTACC
TTCATCATGCGTGATGGCCGCACGTGGTAGCGCTTCTTGTCCTCGAACAA
CACCTCCATCCTGCCGGCATAGGGGCCCTCAGTGGCAAGTTCTCCGACGA
CTTCTGCCCTCAGCTGATCGTACAGTGTATGAACCGTGTCGCCGACCTGC
ACTGCAGGTTCCACGGTCGGCGGATACAAGCTCCAGGTGAACCCTTGTTC
GTCGCAGTCACCAGCACCGCTGCTGTCAGTACTGGGCAGAGTGCCTGGCT
GCTCCTCGCTGTGCTGCACTGAATCAGCTTCAAGTACAGACGTCATGACT
GAAAGCTTTAGCCACTAAGTGGGTCAGCTCCGTGCTACGGTCCTCACAGC
TTCACAACCTCGAAGGTCAACTTCAACCGTGAACTTCCATGAGAGAGATC
TTCGTGTCAGGAACATCAGCACACACGGCGCCTTTGCAGCGACATCTCAG
ATCACTGACTGCTCGCGAAGCGGTGCCGATGAAAGGTGCAAGTGGCGGCG
CTGCAATCGCCTCGCTGTGCCTTGCAGCAGCGACAGCTGCAGCAGCGGAA
TCGCAGTATCAGGCGGCGCTGTCTCGTGCTTCGCCTCTGAAGCAAAACCA
CCAGCGGCCTCTTGCCCTGAGAAAGCGCGCACCATTACTTCGGCCGGCCC
TGCTCGTCCGTGGAGGTCGGTGATACAAAAAAGTTCCATTTTCGACCATG
CACAGCAGCAAGGCGTCAATCACGTGTCGCATCATGAGTCATGATAGAGC
GGATTCGCAAGCTGGTGGTGTGCTGTCCAGCTCTTGTGTTGTCAGATTCA
GTTTAGCTTCAGTCATAGCCCGCTGTCGTCATCTAAGTCTCTGGGTGTTG
TGATGGTCGCGTCATCAATGACAACGCCGTGGCAGGACACGCAGGAAGAC
CTTCTGTTGTAGAGCCGATGCTCTCATGGTGATGTGTGGTTTCCCCAGAT
GTGTAAGTACACAATATGTATGCACCCGCTTATGTAGGTGCATCTCCACC
CTGCAGGTAGGGATGTGTATGCACGTCAAACCCACAAGCAACTTGGTCGC
TGCCGATGGACTGCATGACGCTCTTCGATGCAAGCTCCAGGCTTGTGGCG
TTGCTATTGGCATTGAAACGGATTGGCACAGGTCGTTTTCATGTACAGCA
CGGGTCACAACGCAGACGCCATTCGCCGCGTCGTGTGACACCGACACGCA
TGCCACGCGCCTGCAGGCGACTTGAGGGGCTGGAACGATACGGAAGAGGA
AGAGGAGCAGCCGCTGAGCCATGCGGACGGCGACACCGAGGCTGGCGATG
ACTCGGACGCTGTCGAGGGTGACGCACCTGGCGGTGAAGGGGAGGGGGGC
GATGCTGATGATGATGGTGATGCCGAGGACAGGGGGTGGGGGGAGAGACG
CAGAAAGCACGCACAGCGCAAGCGGGCGACGGGCGCAGCACAGGTGAGTC
GTGAAGTTGCGTTTCTACTGCTGATACGTACCTGTGACCTGCGCGAACTG
TGAGTAAGCAGCGCCTGGGCAGTCTGTCGGCACTGCTCTTGCGCCTTGCG
TCTGCAAGTCGACTGCAACCCCCCCTTGGGCGACGGGCGCAACACAGGCA
TGTCATGAAGCGGCATTTCCATAGCTGATGCGTAACTGTGAACCCTGAAC
TGTGTAGAAGCAGCACTAGGGAAGCTCGTTGCCACTACGAACGTGCCTTA
CGCCTGCAAGTTGACCGCAACACCCACTTGCTGTTGTCGAGGACTTCTGC
AGCATGTGATGTGGCGTCTCCCTTCCATACATTCAACATGCATCTGTCGC
ATGTCAGTCTGGCCTTGAATTGCTGCGCAGCAGCTGTTGCAGGTTGACAG
TGATGAACATCGGGGCAGTAATTGAATGCGCTGTGGGACGACAGAGTCTC
GATGTATCACAGGGCTCGAGAGCAGCACATCATATCGTGCTGCGGCTTCC
CTCATCATGCCTTGACTTCATCTTTGCATCTAGACAGTCACTGACCCTTG
ACGCTGTAGCAATGGATGCAATTATGTGCACACCGCTCTCTGCCGTGCTG
CGTTGGCTCTTTGATGGCTGCACCAGCACCAGTGTGTACTGTTCTGAACA
TCTGTTGTTCATCCACTCTCCATGCTGAAAACAGAAGCCTGAACGGAAGG
GGCTGAAACGGATGAAGCTGCCACCCAACATGCTGCTCAAGGCAAGTGTG
TGCCCATTCTTCTGGCACGTCCTATGCCAGCATGGCGTACTTGCTTCCCT
GGCAGTATGTTGCGATTGAGTTGCTCATATGATGGCAACATCTATTTCAC
TGTAGTGTGCTCTGAGGCTGGCATTGCAGAGCAGCACTGTTGCAACGTGG
CCTCTGTGATGTGCTGTCCGCCAACCTCTTGTGCTACGCTCACAGCGGAT
GCCACTGCTGTAATCATTTCAACTGCCTCTGATGGTACTCTGCCGTGCAA
GCAGACTCCCTTCTTGCACGTATCGAATCATTCGTTCCAACTTGTGACCT
GGCGCGCGTGTCTGCTGTTGCAGGCGGCAAACGGGCTGAAGGTGCTAGTG
ACGGTGGCGCTTGTGGTGCTCATAGTCATTGAGGTCTTCAAGCGATGGTG
AGCGCGTATGCTTAAGCGACGGCAAGCAGGAAATGCATGCAACGGCTGTG
CCAGACATTATTTTTGTTGCTATATGCCAACAAGCTGGCACTTTCACAAC
ATAGAGGCAGGCGCATGCAAAGAGTCGGGCTCATGGCAATTTGACGATTC
GTTCATCAGTACAAGACATCCATCGGAGGCTCACCTTGGAGCCTCAAATG
CTGCCACTTGGTGCTTGTTTGCGTGGAATGCCTTTCCGGCAGTGTTCATG
TGAATGTTAATGTTTCACATAGCTTCTCTCACTGCCGCATTGACACATAG
ATAGACTTGTTGTCTTGCAAACACCGGCAGCTGATGTCAGCAAGAGCGGT
CAACTGCATCTCATACATCATGGTTGCAACAGCATACCGCATTCTATCAC
TCACCAGGCATCTGTCCATGCCATGACAATACCAGAGTGCTCTTGCAGTT
GACGAGTCACGTCTTATAGCTCGCGCCACAAAGGGAGTTCTTGTTCACAG
CATGTCATTCACATGACAAACCAGGGTTTTGACATCATTACATGCGAAAC
ACAAGGCTTTGACCTCCCGCCCTTTTCATCGCACGCATCTGCGCCGCGGG
CCTGCCAATGACAGTTCTCATTCGGCGACTTCGATGCATCACGTAATATG
ATTCATGTTGCCGTTCTTCATGTGCAGCGACGCCAAGACGCTCATCAGCC
TCGCGGGCTTTTTGGTGTACGCATTCGGCCTGTACCAGAAGGTGAGCCCG
CCTATACATGCTGTCCATTTTCCGCCACATGACCTGACTTCTGCGCTGCT
GAGTATTGGTGCTAATCACAAAAAGCGTCGAATGCAGCAGCCGCGCTGCG
GTAAATTGAATGAAAAACAAATCAATGGATCGTTGAGCTCTAGAATGCAG
CCTGTCATCCACAATTATATCCCCGGCGGCCCTCGCCCCTCCCCAAACCA
GCTGTCACGTGTGGTTGACCACAGAACCCAGATGAGATTTCCCGCCTTTG
TGGCACTTACTTTGTCTGCCCGTGCCATCAATGCTTGGAGCTGTCCAGTC
TACTCCCGGTCCTGCTTCAGCGCCACCGCAAGCGCGTGCCTGTCCGCATT
CGACAGGTTGCCCGGCATGCTCAAAGCACCGTTCAGGGGGCATCTTTCGC
ATGACTCCCTCCCAGGGCAACGCCTCGACGCCGTGATCTATGGTTGGATC
TGCCACACGAACGATTTCTACAGTCCGTATTGCTGCTGCGCAGCTGAGAC
GTGCTGCACGCGCGCGCACGCCGCAGCGCATCAGCAGCAGCACTGCAACT
GGCGACGTGCCTCGCACGGCCAAGCTTAAAGCGCCGCGATGCGCGTGCTC
TATGCCCATCAGCCGACAGCGTCGACCGCGCGTGTGCCACACTGCTTGAA
CCCTGTTGTCGCTTTGCGTGGCGCAACAACGTGCGCTGCATGTACGCCGG
CGCATCGCCTCATGCATCTGATGCGCGTGACGCGCCGCGCTGCGTGCAGG
CCGGCGGCGGCGGCGGCGTGCGCATGCGCATGGGCTTCGACGTGAAGGCC
GCGGAGATCGGCAAACGGCACTTCTCGTTCGAGCTGATGAACTACGAGTT
CAGCAAGGTGAGGGGGCACTGCTCTTGTGCTTGGAATACCTTCATGAGGA
GAGACAACTCGGGTAGAGAACCAGACGCCCCGAGTTTGCACGCTGTTTGT
CTCGGCGTTTCAGGCCAGATTGACAATTCGCCATCCAGCTAGATTTGTAT
TAGTAGGCTCTGGGAATCCAGAAGAAGGAGAGTTAAGACCACAGTTATTA
GACCGTAATCTTTTTTAGATTGATAAATATCGAAATTATTGAAAAGCCTA
TATTTTAATTTGCTTTTTGTTTACTCACTGTTGGCATTCTCACACGCTGC
CGATGGATCAAGCATATTTAGTCTTGTACGTGAGCGTCTGACCTCTGATC
CGTGGTCGCCCAACAGCAGCGTGTCGCTGCACTTGCACATGATGCCCTGC
GGTACGTAATACAAACACAACACAGCAGCCAGGTCCACTATGCCGATCTG
TTGTAACGGCAGCGCGAACATAGGCCAGCACTGACTTGGCAGAACTCACC
GAATCGACAACTTTTTGTCAGCATCCAAGGGCACGGCCATGACCGTGTGG
CCACAGCTACTTCTCTTGTAATGATGAGCCCCGTGCAGTGTTAGCGTTTC
AGTCCCTGTTTGCCCACATTGTATGCCATACGCTGTGATGGTACCGCCAT
CTGAAGCTATGTATGACTCCATGCATCACCTCAAAGCGTGCGCTCTGCGA
CCAAGCAACTGCGGCCTGCAAACCGATGCAGCCGTCATCACGTTTTCGGC
GCCTCGCTCCCTGCAACAAAAAGCCCCTGGCACTCGCACTGTGCACGTGC
CAAACCGCCTCGACTAACCCCAGGCGCGCCACACGGCGGCACGCGCTCTA
AGCCGACCTCAGCGCGCTGATGACAATACCTCCCCTGGCGATACGCGATT
GCGTCAAACTTAACGCGCTGTCGTCGCCGTCTGTGTGCCGCAGGACAAGG
CGGCGCTGCGAGTCGCAGAGAAGCAAGCGGCAGCGGCAGGGGCGGCGCCC
ACACCCAAGGTGCGTTAATTATATAGTTATGATTAGCGTCTGTGCACGCC
AATAGATATGTTGCTATGTGGCCATTGACGTTACGGCAGGACTGGTGCGC
CCGCTGCGCTCCTCTCTTTGCTCATCGACAGCTCATTGTGACTGGCGTCC
GGCGCACACTTGGGGGTGTGGGGCGCAGGTGCTCGCTCAGGAGCGCACCT
GCATTGTCAGCGCTGGGTAGGCGCACTTCTCTCTGATTAGCACTTCGCCT
GTTGACAGAGACGTGCTGATGAGGCCACTGCCGGTACGCAGCGCCCACAA
TTCCCGCCATCGCGAGCAGAAGCTGTAAAAACGTCTTAAGATGGCCGATA
CCCCGCATGCTGATATTCCCACATATGTAGCTCCATGTCAGTGCTCTCAG
GTCATTCGGGCATCGCCGGGGGCCCTTGTTGCTGCTCCACCGCGCCAAGT
GCAGGGCCCTCTCCCGCTGGCCGCAAGTTGCGTATATTCTACCGACCATG
GCTCCCTCGCCTTGAGCATCTCCATGACGATGCCATGCATTGCTCATAGG
CTGCCATGCATTGCTCATAGGCTCTGTTCAACGCTTGTGCAAATCTTTGA
GGCAATTGTACAAAGCACCGCGCCGCCACTTCCACCAGCTGGATTGTGTA
GTCACTGATTTGGTGTGCATGCGCGTTCTGCCCGCGCAGCAGGGCGAGGC
GCCCGCCGCCCACAACGTCGAGGAGATGCTGAAGAGCGTCATGGTGAGTG
CCGATTGCGGCAGCGGCAGCAATACCGTAAGCGCTGCAGTAGCGCCGTTG
GTGCCGCGTTGGCCGGAGAGCGCCGGTGTACCTACCGTTGTCTTTGCAAG
GCAGCAGGGCGAATGCAGCGGCGCTCGCTGCGGTCCTGACACATGCGCCA
GTGAACAGTAACACAGAAGCCGCGCGGGGCAGCTGCAGAAACTGCACAGG
CTACCTGTGCTGATGCTCCGTTTACTGGCTTTGGAGCACTTGATGAGATG
GGCACGTCTTCGCACAACGGTTGCGATGCAGTGATCGCTGAGACCATCAT
TGTTGAGGAACGCATGTATATCCGAGACAGAAGCAGAAGAGCTCATCAAC
CGCCGTGTGCTTTGACCAGGCGCATGCCGTTGTGCTTGGTACTTCAAAGT
GCGTGTTGGGGGTGCCAGCTGAGCTCAACCAGCCCAACGCTAACACATGC
CTGCGTGCATCACGCAATCCATGTAGGCAAGACGCTTTCCGGACTGTGCA
TCGGCGCCCTTGCCAACTGCCAGCGGCGCATCGTTCATCAACTCAGCCTG
CTCGCTTCCGCTGCACGTGATGTGCTCAGGCCGGCAACAAGGACGCCGCC
AAAACAAACGAGGCGCGCAAGAAGGCCTCGCCCAGTGCCAAGGACACGCC
GCGCGAGCGGGTGGTGATGTGGGTCAAGCAGCACGTGTTCGGCAGCGGCG
GCGGCGGCGGCTATGACGACGGCGATGCTAAGCATGCCGACGGTGGCGGT
GACTACGACGGCGCCGCCGCCGCCGTGGCAGATGGAGAGGCGCAGAAGTG
AGCGCTGCCAATGGTGCTGCTATGTACATACATGCGTACGCCTGGACAAT
GCCATGATGTACAAGCGTGTGTTTGCAATGTCGAGCCCTTGCATCTGGCG
GCGACGGAAGCAGCGAGAGTAAGCCATACGGTGGCGCAAGCGCGCGTGCG
AAAACGTGCGCTGCGGCACAGCAGTCACCCCTCGCACGCCAGCGGTGCGC
GGGTCTGACTAGTGTCTCAAGCGGCGCGTGCGTGCTCTGCCATCGCCTGC
AGGCCGTCTGAGGGGCTAGCGGACAAAGAGGAGGGGCAAGCGGACAAAGA
GGACGGGCAAGCAGACAAACAGGAGGGGCAAGCGGACACAGACGCCTCCG
CCGCCGAGAACAAAGACGCAGCTGCTGCCACCGCGGATGCCAAACCGCAG
GTACGCTACGCGTTGTGTGCGTCCCTCTGTCTCAATGTGCCTGCAGTGAG
CTGGTGGTGGAGGCCACATTGCGCATACTGGCGCAACTGCTCCAGGACAT
TGTACTTCGAAGCATGTATTCTGGTGCCTGAGGCAACATTGCGGCTTGTG
ACCTGTGATAGGCCACTTGACACCGCCGTGGCACCTCCCCGCCGTCATGA
CCATTCGTCGCAGCGCTGCTCGGTCCTTGCGCACCACCACAGCACCTGCG
CAGCCGCCTGCTTGCAGCTGCACGCCAGGTCCTGCACCCCCCAGCGCGCA
CGCATCCCGCCCATCTCATATAACAATGCCAACACACGCGCCAGTACGCG
CCTCACGCTCCCCCCCCCCTGCCCCCCCCCCCCCGCGCGCTGCGCAGCGC
AAGCCCCACGTGTATGTCCTGGAATTCACGCCTCAGCAGATGCTGGCCGG
CATCAGCGCGTACCTCGCCGACGCGGCGAGCTTCCTCATCGACGCGGCCG
ACCCCGCCACCGACGAGGTCGTCATCCTGCTCACCAGCCCCGGCGGCGGC
GTCTCCGAGTATGGCCTGGCGACGTGTGAGTGCGCGCGCTGCGCGGCGCG
CCGCAAGGGCTTTGCTGGCATTTTAATCTGCGTGCACTGCTTGGCGCCAT
GGGGCGTCGGCGGCGCAGCGCGCGCATGCTCGTATCGAGCGTGCGCGTCT
GGTGTTTTGGGCGCGGGTCACACAAAGTCTTGGGGTCAGCATCATGAGGG
TTTGTGGGGTGGGGACCGCGCACCCGTCGCTGATGCACGTCATGTGGCTC
CAGCGTCTTGCCTTGCTGTTCAGCGCCATCCGTCCATGGCTGCATGCGCT
CACGAGCTCCTGCCCTTCTGCCTTTCCCCCACTTCCACCCCCTCTTCTCT
CGCGATCGATGCTCAGCACACCTGGAGAGGATCAGGGACGCCGGCATCAA
GCTGACGGTCTGCGTGGACACCATCGCGGCCAGCGGTAAGTGCGACGCGC
GCATGTCAGACACGCGGTGGCAGTGATGACAAGCGCACGCGTCGCTGCGC
TTCAACGCCGTGCGTACGCGAGCTTGCTGCATATTCCACGTGGGACGCTG
TGGGTACTCAAGGGCGCCATGCTGCAATCACCAGGCTCAGGCAGGCGCTT
TGGTACAGCTCTGAACGCGCGCTGAGACAAGCCAGAAGTGCCGCTCGTAG
CAGAGCGCGCGTCCGCTGTGCAGTGATCGACCGCCACCTGCTGCCGCTCA
ATCCGCCGCTGTGGATGTCCGAGCAGTCTTGCTGTCTGATGAGGTTTGTG
CCACCCATGCAGTGAGCCGCATTGCTGACAGCACATGCCGCTGTGCCATT
CTGGTGACGAAGCACCGCTGGCGGCGCGACAGCTTGCTCTGCACGCACGC
TGCCGTCACACTGAGAGCGCGCGCATCTGCCGCTGCCGCCGTGACTGCTG
CTGTCGTGACTGCCGCTACCACGCCTCTGAGAGCACATGCACCTGCTGCT
GCCGCTGCGCTCGCTGTTGTCGCCGCGCAGGAGGGTACATGATGGCGGTC
GTCGCATCGCACCTCGTCGCGGCGCCGTTTGCCATGGTGAGCAGCGCTCA
ACATGCACTTTTGCAATTTACAACGGCAGTTGCGCATTGTGGCATTGCAA
CTGAGATTACGGCAGGACTGCACATGGAAGGCTGCATTTTGCGTCTGCCA
CGCTGTTTCCTGCGGGGCTCCTGATCAATCGATGTTTCCACGCACCACCA
TCCCTTCTCTAATTTGGCAGGGGGGGTCCGCTGCAAGCGCGCTGCGGCGC
TGAGCCTTTGCCCTGCGACATCAGCGGCAACACCTCCTCCCCGTCTGCGT
ACTCGGAGTGTCGGACCTTGTGTGGGCCAACAAGTCCCATGCACCTCACC
CTCACAGCGCGCTTGATGCCATCGCGTGCGCGCGTACTCGTCGACGCGCC
AGGCGATCGCGCGCCACTCAGCTTTGCACCATGTGCTTCCCCCCCCCCCC
TCTTCGTGCAGGTCGGCAGCATAGGCGTCAGGGGCGGCCTCCTCAACTTC
AACAAGGCCCTCAGGGAGGTGCGTCCTCGCCGCCGCGTGGCGCTGGTCCA
CGCATGCCCGAAACTGCTGCATAATGGCGTTGCTTCAGCGAACTAAGCCG
ATCTGCCATGGCGCGCACGCGCTCATTGAGCGTCGTCTGCCACGCCACGC
TTGCGTCAGCACCAACCAGCTGATGCCATGCTGCAGTGTGTGTTTGAATC
GAAGACTCCAGGTGCTGAATTGGGGGGGCAGAATGGCATCTCTTCGGTGC
GCCGACCTACCTTGCTGCCCTGTCACACGGCTCTTGCTCTCATTACAATA
TTTTTTCGCTGTTTCTGCCGGCGCGCTGTCGCTGATGTTGGCTGCAGCGC
GGCGTGGAGAGCATCTTGCTGACCGCTGGCAAGTACAAGGCGCCGCTGAC
CTCGTTTAATGAGGTGCGTAAACGCATGGTGCACCTGAACTGTTGCTGCT
GCTTCCCATGCTGCTGCTACCGCTGTTGAGACTGACATGGATGATGCGCT
GTTCCTTTAGCATCGCTGCGTACCACGCACTGATGCGTCTGCTCCTGTTG
ACTGTCGCGCGCACAGTGTACGGTCCTAATCTGCATTGCTCCTTTGCCGT
AGGAGCTGTGAGCCAGATACCATGACGATGCCCACTTCTCAAGAGGACTT
TGCTGCCGTGCGAGCCCCTGCTGCTCTCTTTACGACTGAGTTGCTACTGC
TGGCTGTCATTCTCGCGCCGGCATCAAGTTTTTCCGCATGTGTCTGAAAT
GATTCCAGACGCACTGTTAAAAGTGACAAGGACACTACACCTGCGATATG
TCTCATGCATGGTTCCCTATTCATTCCGTTTCTTTTACATGCGTCCATTG
CGGCATGTTGGCTGTGCTTCCGGCCCTCAGGTCACCCCCGAAGGCCTAGC
TAAGCAGCAGCAAGTCATGAATGAGATCCAGGCAAGTCCCCGCGCAGCGC
GGTCGCAGGCGTCACCGCTCGTTTGCCTGCATCGGCACGTCGTGATCCAC
AACGCGCACCAATACTATGTTGCCTGTATGGCCTGTATGTACAGCACTTT
TTCCTGCACCCCAGCGATTTTGCACTGCGCGTGTTGCGTGCATGCGCGTG
CCGCCCTCTCCACTGCGCCCCCCCCCGCCGCCGACTTCGCCGCTGCGCTG
GGCACGCCGCGCCACCAGCAGGGCGAGCACACCTCGCTTTGCCGCTCAGA
GGCACCCGTGACAACCGTTTCGTGACCGCGTAACTGCCGTTTGCCATCCC
CCGCAGGACGCCTTCAAGGCGCACATCAAGCGCCACCGGCCGCAGATCGA
CGTGGACGCCGTCGGCACGGGGGAGGTCTGGCTCGGCGTGTATGCAGAGG
TGCGTCGCCGCTGCATCGCTCCCCTCTCACGCGCAAACTTCAATGATGGC
TGCCGTGAATTGCCGTGCTTGCGCATCACTCGGGGGAAACCGTATCATTC
TGCCGTCAGCTCGTGTTTGTGGACGCTGCAGTAGCGCGCGGACAAACGCT
GGCGTACACTGTGTTTGGGGAATAGGGTTGCGTGGCGCGCGACTGGCAGT
CGGCACTGCTCTGTCGTCAGAGTGTCTGCATGGGGGGGAGGCTGACGTAT
GCGGCCATGACTGTGTTGGTGCAGCGTGTCATCACTTCAAACGCTGAACC
CGCTGCGAGTGCGTGTTCATATTCAGAGCCATGGCCTGGTGGACGAGGTC
GGCACCAGCGCTCAGTACCTGCGGCGCCGCATGACGGACGGCGGCGCCGA
GGTCCTCAGGCTCGTCAAGTACGAGCAGCCGCGCAGCATGGAGCTGGGTG
AGTGACACTCCCTCGCGCGCTGATGATGCACGCGTGCGCGCATTGCACGT
CAAGAATGCTGCCTGCGCTGCTGTCGCGTGCGTCGGCGTGATGCTAGCGG
CGCGTGTTGCGCCATCCAAACGCGCAGCCAGCCGGCCTGCAGTGCCATGA
TTGGAGCATTAACTATGAGCAGCCGCGCGTGGAGCTGGGTGGTGACGCTC
CCTGCTGGCGCTGATACACGCATGTGCGCGTGTACGTCAGGCGTGCTGCT
TGCGCCGCCGTCGCATGCGTCGGCGCGGCGCTGGCGGCACGTTTTGTGCC
ATTCAAGCACACAGCACAGCGCCATGACATGAGGAGCGGTTTTTGACCAT
TGTTGCTCTTCGCCGCTGCTCTGCAGGCCTGCTGAGGAAATCTCTGCTGG
GACCGTTCGCCATGGTCAGCGTGATGTTTGCCAGGATGGGCCGCCTTCTG
CAGGTAACAGTGACACCGGGTGAGGGCGTGTAGTAGTCTGTTGTGCGCGT
GTGTTCAGGTGTGCTGCGGCCGCACAACAGAGGCGCAGCACGTGCTCGTA
CATCCTCTGCACGCGTCAGCCTTGTGCAGCGCTGCGAGGTGCGATTGCGG
TACCGTACGCGTGGCTAGCTGCCGACGATGCGCACCGTGAGGCAGGCACA
CTAGCTGCGACTGCAGCAGCAAAGTGACACGCCCTCGCTCCGAGTGAGAG
CCCTGCCTACGACAGCGTATGATGAGACGCGGGAATCATAAAGAGCAGCC
TCCGCTCGCTCGTTGCTGGAAGTGACTCGTCCTACAAGCAGCATGCACGC
GCGCTGCCCGCAAGGCGCAGTACAGGCTGCCGCTGTCTGACCTGCTTCAT
GTCCGTGATCGTTCCTTAAGCCTTGGTGACCGTCTGGTGGCTAACCCTAA
CTTTAACCCTAACCCTAAGCGTTCAGTCTGCCCGAGCTGATGATTCTAAC
GCCCAACAGGGACGCTGTGGCGCCTGTACACGTGACATGCTCTTGCTGTC
TGGCATCCCCTTGTCGTCAGCTTGAGAGCCTCAGTCTGCATGCTCCCCCT
GCAGCAGGGTTCAATGATGAAATGCGCTTGAGCTGAGCACGTCAGCAGTT
TGGTGGCTGCAGTCAGACCAGCAGCAATTTTGCATCGTGCTACTTGAAAG
CATAAGATTACACCTCCTGTTTTGACTTTCTTTTCTTTTGCTGCACAATT
CTCAGCTAACGTGCTCAAATGTCGCCCTGACCGCTGACCTCACGACGCCC
TTGCAGGCGGCGGAGATTGCGCTGGGAACATCTCATGCTGTCACGGTGAG
CAGTTTGACATGGCATGACAGCACATGACTAGTATAATGCTGGTGTTCAT
GCATAGGCGGCGAATGATCAATACTCCAGTTATGCCAAAGGATGCAGCTT
GTGCTTCTGCTCCTGCCGCTGCAGTGCCACTGCAAAAACAACATTGTCTC
TCAGCACCAGCCGTTGTAAGTGCCAACCATGGGTGTGCTCGCACATGCAT
ATCTGCTCAAGCAACCCAACCTTCCCGGGGAGACGTCATTCGTGCACACT
GTCTTCGAGCCCCGTAACATGCAGCCACCAGCAGAGCGCGCTGTTCTGAC
AGCTGTGGTCCTGCGTGCCATGTCAGCCTTGAGCCACCCGCACCGTTTCC
GCTGATTGCACCGCCGTTTGCCTTGCGCGTGCGCTGCAGGATGGGCAGAG
CCAGGTCGCGCAAGCCGTCCCAGGACCCCAACCGATGCTCCAATATGACG
GGAGCACGCCGGCGCTCCAATATCAGTGGTAGGGAATGACATGATCAGCG
GACACAAGCGGTGCGCGGATTTCCACACAGCTGCAGCACCTTTGCACCAT
GCGAGGAGCGGTGCCTTGTGCTTGTTGAAGCACGCAGTACATACATGCAC
AGTGCAGGTGGACTCGCAGTGTACGGCCGGTGACACCAGCGGCTTCACTG
AGGCCAGACACCGCCACTGCCGCAAACTTGAAGCCACTGCAGTTAGGAGT
GCCACAAGCCATGCATTTTGGTGCATGACAAGGTCGCTCTGCGCTGCACA
TTGTATTGTTGCGGTTCACGGCGCTGGCGCTGTTGATACAGATGCACGCT
ATGCGCGCTCTCTTTGCCACACACCGGTGCAGCTTTGAACCCACCGGCCA
CTGTAAATACAACCTGTACTGCCTGGTGCACATGCATCCAGCACCCCATC
A
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Coding sequence (CDS) from alignment at Contig_45:469173..482723+

>mRNA_6090 ID=mRNA_6090|Name=jgi.p|Trimin1|349547|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1917bp|location=Sequence derived from alignment at Contig_45:469173..482723+ (Tribonema minus UTEX_B_3156 )
ATGGCAGATGTCACAGGGGCCCTCAGTGGCAAGTTCTCCGACGACTTCTG
CCCTCAGCTGATCGTACAGTGTATGAACCGTGTCGCCGACCTGCACTGCA
GGTTCCACGGCGACTTGAGGGGCTGGAACGATACGGAAGAGGAAGAGGAG
CAGCCGCTGAGCCATGCGGACGGCGACACCGAGGCTGGCGATGACTCGGA
CGCTGTCGAGGGTGACGCACCTGGCGGTGAAGGGGAGGGGGGCGATGCTG
ATGATGATGGTGATGCCGAGGACAGGGGGTGGGGGGAGAGACGCAGAAAG
CACGCACAGCGCAAGCGGGCGACGGGCGCAGCACAGGCGGCAAACGGGCT
GAAGGTGCTAGTGACGGTGGCGCTTGTGGTGCTCATAGTCATTGAGGTCT
TCAAGCGATGCGACGCCAAGACGCTCATCAGCCTCGCGGGCTTTTTGGTG
TACGCATTCGGCCTGTACCAGAAGGCCGGCGGCGGCGGCGGCGTGCGCAT
GCGCATGGGCTTCGACGTGAAGGCCGCGGAGATCGGCAAACGGCACTTCT
CGTTCGAGCTGATGAACTACGAGTTCAGCAAGGACAAGGCGGCGCTGCGA
GTCGCAGAGAAGCAAGCGGCAGCGGCAGGGGCGGCGCCCACACCCAAGCA
GGGCGAGGCGCCCGCCGCCCACAACGTCGAGGAGATGCTGAAGAGCGTCA
TGGCCGGCAACAAGGACGCCGCCAAAACAAACGAGGCGCGCAAGAAGGCC
TCGCCCAGTGCCAAGGACACGCCGCGCGAGCGGGTGGTGATGTGGGTCAA
GCAGCACGTGTTCGGCAGCGGCGGCGGCGGCGGCTATGACGACGGCGATG
CTAAGCATGCCGACGGTGGCGGTGACTACGACGGCGCCGCCGCCGCCGTG
GCAGATGGAGAGGCGCAGAAGCCGTCTGAGGGGCTAGCGGACAAAGAGGA
GGGGCAAGCGGACAAAGAGGACGGGCAAGCAGACAAACAGGAGGGGCAAG
CGGACACAGACGCCTCCGCCGCCGAGAACAAAGACGCAGCTGCTGCCACC
GCGGATGCCAAACCGCAGCGCAAGCCCCACGTGTATGTCCTGGAATTCAC
GCCTCAGCAGATGCTGGCCGGCATCAGCGCGTACCTCGCCGACGCGGCGA
GCTTCCTCATCGACGCGGCCGACCCCGCCACCGACGAGGTCGTCATCCTG
CTCACCAGCCCCGGCGGCGGCGTCTCCGAGTATGGCCTGGCGACGTCACA
CCTGGAGAGGATCAGGGACGCCGGCATCAAGCTGACGGTCTGCGTGGACA
CCATCGCGGCCAGCGGAGGGTACATGATGGCGGTCGTCGCATCGCACCTC
GTCGCGGCGCCGTTTGCCATGGTCGGCAGCATAGGCGTCAGGGGCGGCCT
CCTCAACTTCAACAAGGCCCTCAGGGAGCGCGGCGTGGAGAGCATCTTGC
TGACCGCTGGCAAGTACAAGGCGCCGCTGACCTCGTTTAATGAGGACGCC
TTCAAGGCGCACATCAAGCGCCACCGGCCGCAGATCGACGTGGACGCCGT
CGGCACGGGGGAGGTCTGGCTCGGCGTGTATGCAGAGAGCCATGGCCTGG
TGGACGAGGTCGGCACCAGCGCTCAGTACCTGCGGCGCCGCATGACGGAC
GGCGGCGCCGAGGTCCTCAGGCTCGTCAAGTACGAGCAGCCGCGCAGCAT
GGAGCTGGGCCTGCTGAGGAAATCTCTGCTGGGACCGTTCGCCATGGTCA
GCGTGATGTTTGCCAGGATGGGCCGCCTTCTGCAGGCGGCGGAGATTGCG
CTGGGAACATCTCATGCTGTCACGGATGGGCAGAGCCAGGTCGCGCAAGC
CGTCCCAGGACCCCAACCGATGCTCCAATATGACGGGAGCACGCCGGCGC
TCCAATATCAGTGGTAG
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