Trimin1|349509|estExt_Genemark1.C_Ctg_450007 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|349509
Unique Name	Trimin1\|349509\|estExt_Genemark1.C_Ctg_450007
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	917

Homology

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BLAST of jgi.p|Trimin1|349509 vs. uniprot
Match: A0A835YVR4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVR4_9STRA)

HSP 1 Score: 1340 bits (3467), Expect = 0.000e+0
Identity = 916/916 (100.00%), Postives = 916/916 (100.00%), Query Frame = 0

Query:    1 MGSLSCSGRLDILDARELECLDLCCRAVCVLLRNAGRLLLATLPTEDLSAPAAVETISTDTTVIAGTEWQLLDGPAVVSVSPLTDTRSRVLVRRQPEGGGVANAQRAAAGRAQLTAHPLGHLRTLLLSNCSDCNVDGRVQLLLTLCEDDTGGCAFASVAPWPPPLPPSTEHAATPAXXXXXXXCACAASPRPQADLYAGAADAQLXXXXXXXXXXXXXXXXXXXXXXQLASVDDAGGAVVVTLASASASAADAVEEAAQPPSQRCVHLLACDELQHATVVSFDGASAAHVADFLGTGRQQVAVVPAGGKASLAAVAKHIVVTDGWTVWRDGSAQRIPSSGHTYVLATTTSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAKHTGRERRRNARAQQDAAQHRAAQLQEVAAALAALEATEAARLAHMRRECAAKRQLLCAGEGLLAEMAEAAAVXXXXXXXXXXAREPAALFAPFTGDLVPLFSSAQPADTMLTQHRSAPAPPGAPPPQCLSSALQLAAATADFDAASGTLSISALVRNASAAALARRVCISAAPAIGALRSDLMLPPAAVDAQHGYSLCVTSDVIATLRPGAAAQLLATARVPRRLLRGAPLTLPLLLHCAGGSTAGGSDTQHPPQRRAVPCGSVAVSAAALVGLTDAVADEQAQHPLPPLAAAPPPLPPRHWRAATLALRSRARGLTDLPSQLGALSRGAQGRLFALRARLAARVHCRTLATLRVHVKDATLLAPLLQAVRQLLPADVSLSAHPCDARLLALAADGLTGIEAELPGARAAPASGAYDTGGGATRSSERQAHTDLCAARLVSAFAAL 916
            MGSLSCSGRLDILDARELECLDLCCRAVCVLLRNAGRLLLATLPTEDLSAPAAVETISTDTTVIAGTEWQLLDGPAVVSVSPLTDTRSRVLVRRQPEGGGVANAQRAAAGRAQLTAHPLGHLRTLLLSNCSDCNVDGRVQLLLTLCEDDTGGCAFASVAPWPPPLPPSTEHAATPAXXXXXXXCACAASPRPQADLYAGAADAQLXXXXXXXXXXXXXXXXXXXXXXQLASVDDAGGAVVVTLASASASAADAVEEAAQPPSQRCVHLLACDELQHATVVSFDGASAAHVADFLGTGRQQVAVVPAGGKASLAAVAKHIVVTDGWTVWRDGSAQRIPSSGHTYVLATTTSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAKHTGRERRRNARAQQDAAQHRAAQLQEVAAALAALEATEAARLAHMRRECAAKRQLLCAGEGLLAEMAEAAAVXXXXXXXXXXAREPAALFAPFTGDLVPLFSSAQPADTMLTQHRSAPAPPGAPPPQCLSSALQLAAATADFDAASGTLSISALVRNASAAALARRVCISAAPAIGALRSDLMLPPAAVDAQHGYSLCVTSDVIATLRPGAAAQLLATARVPRRLLRGAPLTLPLLLHCAGGSTAGGSDTQHPPQRRAVPCGSVAVSAAALVGLTDAVADEQAQHPLPPLAAAPPPLPPRHWRAATLALRSRARGLTDLPSQLGALSRGAQGRLFALRARLAARVHCRTLATLRVHVKDATLLAPLLQAVRQLLPADVSLSAHPCDARLLALAADGLTGIEAELPGARAAPASGAYDTGGGATRSSERQAHTDLCAARLVSAFAAL
Sbjct:    1 MGSLSCSGRLDILDARELECLDLCCRAVCVLLRNAGRLLLATLPTEDLSAPAAVETISTDTTVIAGTEWQLLDGPAVVSVSPLTDTRSRVLVRRQPEGGGVANAQRAAAGRAQLTAHPLGHLRTLLLSNCSDCNVDGRVQLLLTLCEDDTGGCAFASVAPWPPPLPPSTEHAATPAXXXXXXXCACAASPRPQADLYAGAADAQLXXXXXXXXXXXXXXXXXXXXXXQLASVDDAGGAVVVTLASASASAADAVEEAAQPPSQRCVHLLACDELQHATVVSFDGASAAHVADFLGTGRQQVAVVPAGGKASLAAVAKHIVVTDGWTVWRDGSAQRIPSSGHTYVLATTTSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAKHTGRERRRNARAQQDAAQHRAAQLQEVAAALAALEATEAARLAHMRRECAAKRQLLCAGEGLLAEMAEAAAVXXXXXXXXXXAREPAALFAPFTGDLVPLFSSAQPADTMLTQHRSAPAPPGAPPPQCLSSALQLAAATADFDAASGTLSISALVRNASAAALARRVCISAAPAIGALRSDLMLPPAAVDAQHGYSLCVTSDVIATLRPGAAAQLLATARVPRRLLRGAPLTLPLLLHCAGGSTAGGSDTQHPPQRRAVPCGSVAVSAAALVGLTDAVADEQAQHPLPPLAAAPPPLPPRHWRAATLALRSRARGLTDLPSQLGALSRGAQGRLFALRARLAARVHCRTLATLRVHVKDATLLAPLLQAVRQLLPADVSLSAHPCDARLLALAADGLTGIEAELPGARAAPASGAYDTGGGATRSSERQAHTDLCAARLVSAFAAL 916

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|349509 vs. uniprot

BLAST of jgi.p|Trimin1|349509 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835YVR4_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 477..497
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 343..374
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 470..484
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 395..433
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 468..489

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_45	contig	Contig_45:31442..36637 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|349509	mRNA_6034	Tribonema minus UTEX_B_3156	mRNA	Contig_45 31442..36775 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|349509|estExt_Genemark1.C_Ctg_450007 ID=Trimin1|349509|estExt_Genemark1.C_Ctg_450007|Name=jgi.p|Trimin1|349509|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=917bp
MGSLSCSGRLDILDARELECLDLCCRAVCVLLRNAGRLLLATLPTEDLSA
PAAVETISTDTTVIAGTEWQLLDGPAVVSVSPLTDTRSRVLVRRQPEGGG
VANAQRAAAGRAQLTAHPLGHLRTLLLSNCSDCNVDGRVQLLLTLCEDDT
GGCAFASVAPWPPPLPPSTEHAATPAAAAAAVVCACAASPRPQADLYAGA
ADAQLLLCAPGGVPRCATPLPARAVDVQLASVDDAGGAVVVTLASASASA
ADAVEEAAQPPSQRCVHLLACDELQHATVVSFDGASAAHVADFLGTGRQQ
VAVVPAGGKASLAAVAKHIVVTDGWTVWRDGSAQRIPSSGHTYVLATTTS
EPTAPSSKKRKKGRAAGAATDGGGGGNGGGAADVGATATAAAAADGAGGD
GPEDGGAAAPSKKKQKKRRDIAAAGGVQEQTGATTTGDGAAAAVAGGEAE
GAAAAAAAAAAAAAAGATAKHTGRERRRNARAQQDAAQHRAAQLQEVAAA
LAALEATEAARLAHMRRECAAKRQLLCAGEGLLAEMAEAAAVAAAEAGAV
AGAREPAALFAPFTGDLVPLFSSAQPADTMLTQHRSAPAPPGAPPPQCLS
SALQLAAATADFDAASGTLSISALVRNASAAALARRVCISAAPAIGALRS
DLMLPPAAVDAQHGYSLCVTSDVIATLRPGAAAQLLATARVPRRLLRGAP
LTLPLLLHCAGGSTAGGSDTQHPPQRRAVPCGSVAVSAAALVGLTDAVAD
EQAQHPLPPLAAAPPPLPPRHWRAATLALRSRARGLTDLPSQLGALSRGA
QGRLFALRARLAARVHCRTLATLRVHVKDATLLAPLLQAVRQLLPADVSL
SAHPCDARLLALAADGLTGIEAELPGARAAPASGAYDTGGGATRSSERQA
HTDLCAARLVSAFAAL*