Trimin1|349507|estExt_Genemark1.C_Ctg_450005 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|349507
Unique NameTrimin1|349507|estExt_Genemark1.C_Ctg_450005
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length488
Homology
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BLAST of jgi.p|Trimin1|349507 vs. uniprot
Match: A0A835Z1A0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1A0_9STRA)

HSP 1 Score: 830 bits (2145), Expect = 1.120e-301
Identity = 463/463 (100.00%), Postives = 463/463 (100.00%), Query Frame = 0 
Query:    1 MERRRAAACGGAAGGSCGVPDARSSMCTGFTRSVGGQARKLAFKSTANGPRGLLNTSHRVRAPVIGAAAGGAGWQLVSEFCAAQDASARALAKQLLGARLPPIGRALVSGSGPVQLVLAKAGWSGTDAGLLVGYHAGLLPLAVAATIAGQLACLAVTYALLRTLLAGGAEVRRDPAALRAPSAAPPSLREVADWAAFNATRSAVDRVAAQRNATLAFGGAGGAHPGVGGHAAQPLAARDLGVSLLTALYRKPPALAPAAXXXXXAAAMRIDALAEVRGFDLSSTSGQLLAQAVVEGMARGGGADGGGGYGETARPLTALLDARMLAELREMEGTRVGGYTLVSTRGGRDPAVTRMAAAAALAGPRWALLAAVLLRVRPAAAATGVASGIALSAMAVASLVTAGQAHAAVLYCVVRDCVGSPARALLQVRGVRRVEWLMRLLVGKYLLLELQRTFKRSLQRSRA 463
            MERRRAAACGGAAGGSCGVPDARSSMCTGFTRSVGGQARKLAFKSTANGPRGLLNTSHRVRAPVIGAAAGGAGWQLVSEFCAAQDASARALAKQLLGARLPPIGRALVSGSGPVQLVLAKAGWSGTDAGLLVGYHAGLLPLAVAATIAGQLACLAVTYALLRTLLAGGAEVRRDPAALRAPSAAPPSLREVADWAAFNATRSAVDRVAAQRNATLAFGGAGGAHPGVGGHAAQPLAARDLGVSLLTALYRKPPALAPAAXXXXXAAAMRIDALAEVRGFDLSSTSGQLLAQAVVEGMARGGGADGGGGYGETARPLTALLDARMLAELREMEGTRVGGYTLVSTRGGRDPAVTRMAAAAALAGPRWALLAAVLLRVRPAAAATGVASGIALSAMAVASLVTAGQAHAAVLYCVVRDCVGSPARALLQVRGVRRVEWLMRLLVGKYLLLELQRTFKRSLQRSRA
Sbjct:    1 MERRRAAACGGAAGGSCGVPDARSSMCTGFTRSVGGQARKLAFKSTANGPRGLLNTSHRVRAPVIGAAAGGAGWQLVSEFCAAQDASARALAKQLLGARLPPIGRALVSGSGPVQLVLAKAGWSGTDAGLLVGYHAGLLPLAVAATIAGQLACLAVTYALLRTLLAGGAEVRRDPAALRAPSAAPPSLREVADWAAFNATRSAVDRVAAQRNATLAFGGAGGAHPGVGGHAAQPLAARDLGVSLLTALYRKPPALAPAAXXXXXAAAMRIDALAEVRGFDLSSTSGQLLAQAVVEGMARGGGADGGGGYGETARPLTALLDARMLAELREMEGTRVGGYTLVSTRGGRDPAVTRMAAAAALAGPRWALLAAVLLRVRPAAAATGVASGIALSAMAVASLVTAGQAHAAVLYCVVRDCVGSPARALLQVRGVRRVEWLMRLLVGKYLLLELQRTFKRSLQRSRA 463
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349507 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835Z1A0_9STRA1.120e-301100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 458..487
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..17
score: 7.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_45contigContig_45:22895..27396 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349507mRNA_6032Tribonema minus UTEX_B_3156 mRNAContig_45 22584..27396 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|349507|estExt_Genemark1.C_Ctg_450005 ID=Trimin1|349507|estExt_Genemark1.C_Ctg_450005|Name=jgi.p|Trimin1|349507|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=488bp
MERRRAAACGGAAGGSCGVPDARSSMCTGFTRSVGGQARKLAFKSTANGP
RGLLNTSHRVRAPVIGAAAGGAGWQLVSEFCAAQDASARALAKQLLGARL
PPIGRALVSGSGPVQLVLAKAGWSGTDAGLLVGYHAGLLPLAVAATIAGQ
LACLAVTYALLRTLLAGGAEVRRDPAALRAPSAAPPSLREVADWAAFNAT
RSAVDRVAAQRNATLAFGGAGGAHPGVGGHAAQPLAARDLGVSLLTALYR
KPPALAPAAAAAATAAAMRIDALAEVRGFDLSSTSGQLLAQAVVEGMARG
GGADGGGGYGETARPLTALLDARMLAELREMEGTRVGGYTLVSTRGGRDP
AVTRMAAAAALAGPRWALLAAVLLRVRPAAAATGVASGIALSAMAVASLV
TAGQAHAAVLYCVVRDCVGSPARALLQVRGVRRVEWLMRLLVGKYLLLEL
QRTFKRSLQRSRARRLQLQHQRQQLQQQYEDQEQQQR*
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