Trimin1|166576|e_gw1.45.91.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|166576
Unique NameTrimin1|166576|e_gw1.45.91.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length83
Homology
BLAST of jgi.p|Trimin1|166576 vs. uniprot
Match: A0A835YVU6_9STRA (Heat shock transcription factor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVU6_9STRA)

HSP 1 Score: 163 bits (412), Expect = 6.000e-51
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0
Query:    1 MSCVLLLHLQAPALFISALVEILGGLNNDIVSWTASGKGFIIKDSDRFANEILQRHFKHNRLSSFQRQLNLYGFRKVRYTRP 82
            MSCVLLLHLQAPALFISALVEILGGLNNDIVSWTASGKGFIIKDSDRFANEILQRHFKHNRLSSFQRQLNLYGFRKVRYTRP
Sbjct:    1 MSCVLLLHLQAPALFISALVEILGGLNNDIVSWTASGKGFIIKDSDRFANEILQRHFKHNRLSSFQRQLNLYGFRKVRYTRP 82          
BLAST of jgi.p|Trimin1|166576 vs. uniprot
Match: A0A835ZDM3_9STRA (HSF-type DNA-binding-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDM3_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 2.310e-23
Identity = 44/67 (65.67%), Postives = 57/67 (85.07%), Query Frame = 0
Query:   11 APALFISALVEILGGLNNDIVSWTASGKGFIIKDSDRFANEILQRHFKHNRLSSFQRQLNLYGFRKV 77
            APALF+SALV+IL G   DI++W  SG  F+I+D++RF++E+L  HFKHN+LSSFQRQLNLYGFRK+
Sbjct:   32 APALFLSALVDILRGGYEDIIAWNPSGTCFMIRDAERFSDEVLVHHFKHNKLSSFQRQLNLYGFRKI 98          
BLAST of jgi.p|Trimin1|166576 vs. uniprot
Match: A0A7S2BSE7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BSE7_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 8.880e-17
Identity = 38/67 (56.72%), Postives = 46/67 (68.66%), Query Frame = 0
Query:   11 APALFISALVEILGGLNNDIVSWTASGKGFIIKDSDRFANEILQRHFKHNRLSSFQRQLNLYGFRKV 77
            AP +F   L EIL     DI+ WT SGK FIIK+ + F   IL ++F+H + SSFQRQLNLYGFRKV
Sbjct:   11 APQVFPRKLYEILSTEREDIIGWTDSGKSFIIKEMETFVTNILMKYFRHQKYSSFQRQLNLYGFRKV 77          
BLAST of jgi.p|Trimin1|166576 vs. uniprot
Match: A0A7S2G7U9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G7U9_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 1.970e-16
Identity = 37/67 (55.22%), Postives = 48/67 (71.64%), Query Frame = 0
Query:   11 APALFISALVEILGGLNNDIVSWTASGKGFIIKDSDRFANEILQRHFKHNRLSSFQRQLNLYGFRKV 77
            AP +F   L EIL    +D++ WT+SGK FII + + F NEIL  +F+H + SSFQRQLNLYGFRK+
Sbjct:  103 APQVFPRKLYEILTNERSDVIGWTSSGKSFIILEMEIFVNEILMNYFRHQKYSSFQRQLNLYGFRKI 169          
BLAST of jgi.p|Trimin1|166576 vs. uniprot
Match: A0A6H5JVV9_9PHAE (HSF_DOMAIN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JVV9_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 2.230e-16
Identity = 40/67 (59.70%), Postives = 50/67 (74.63%), Query Frame = 0
Query:   11 APALFISALVEILGGLNNDIVSWTASGKGFIIKDSDRFANEILQRHFKHNRLSSFQRQLNLYGFRKV 77
            AP  F S L EIL G N DIV WTA+G+GF ++D  R ++E+L R FK ++ SSFQRQLNLYGFRK+
Sbjct:   58 APQAFPSKLYEILEGENPDIVGWTATGRGFEVRDHARLSSEVLGRFFKQDKFSSFQRQLNLYGFRKI 124          
BLAST of jgi.p|Trimin1|166576 vs. uniprot
Match: A0A7S2CXJ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CXJ7_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 1.900e-15
Identity = 37/67 (55.22%), Postives = 50/67 (74.63%), Query Frame = 0
Query:   11 APALFISALVEILGGLNNDIVSWTASGKGFIIKDSDRFANEILQRHFKHNRLSSFQRQLNLYGFRKV 77
            AP +F   L EIL   ++DI+SWT +G  F+I++ D F NEIL ++F+H + SSFQRQLNLYGFRK+
Sbjct:   81 APQVFPRKLYEILTLESSDIISWTENGTSFVIQEMDDFVNEILMKYFRHRKYSSFQRQLNLYGFRKI 147          
BLAST of jgi.p|Trimin1|166576 vs. uniprot
Match: A0A7S2R5C8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5C8_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 6.470e-15
Identity = 35/67 (52.24%), Postives = 46/67 (68.66%), Query Frame = 0
Query:   11 APALFISALVEILGGLNNDIVSWTASGKGFIIKDSDRFANEILQRHFKHNRLSSFQRQLNLYGFRKV 77
            AP +F   L EIL   + D +SWT SG  F+IKD + F   +L ++F+H + SSFQRQLNLYGFRK+
Sbjct:   73 APQVFPRKLYEILDNESEDTISWTESGHSFVIKDMETFVTSVLMKYFRHQKFSSFQRQLNLYGFRKI 139          
BLAST of jgi.p|Trimin1|166576 vs. uniprot
Match: A0A6V1QFS1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QFS1_HETAK)

HSP 1 Score: 77.4 bits (189), Expect = 8.020e-15
Identity = 35/67 (52.24%), Postives = 48/67 (71.64%), Query Frame = 0
Query:   11 APALFISALVEILGGLNNDIVSWTASGKGFIIKDSDRFANEILQRHFKHNRLSSFQRQLNLYGFRKV 77
            AP  F   L EIL     D++SW A+G  F ++D DRF+ EIL ++F+H++ +SFQRQLNLYGFRK+
Sbjct:   11 APQAFARKLYEILEVEPGDLLSWNAAGNAFFVRDIDRFSKEILMKYFRHSKFASFQRQLNLYGFRKI 77          
BLAST of jgi.p|Trimin1|166576 vs. uniprot
Match: A0A835Z6Z9_9STRA (HSF-type DNA-binding-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Z9_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 1.710e-14
Identity = 34/67 (50.75%), Postives = 45/67 (67.16%), Query Frame = 0
Query:   11 APALFISALVEILGGLNNDIVSWTASGKGFIIKDSDRFANEILQRHFKHNRLSSFQRQLNLYGFRKV 77
            AP  F   L E+L   +  +VSW  +G+GFII D D F N  L ++F+HN+ +SFQRQ NLYGFRK+
Sbjct:    5 APQAFPRRLYELLQEEDASVVSWIKNGEGFIINDMDTFVNTTLVKYFQHNKYTSFQRQCNLYGFRKI 71          
BLAST of jgi.p|Trimin1|166576 vs. uniprot
Match: A0A6V2VRS5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2VRS5_HETAK)

HSP 1 Score: 75.5 bits (184), Expect = 3.750e-14
Identity = 33/67 (49.25%), Postives = 46/67 (68.66%), Query Frame = 0
Query:   11 APALFISALVEILGGLNNDIVSWTASGKGFIIKDSDRFANEILQRHFKHNRLSSFQRQLNLYGFRKV 77
            AP +F   L +IL   + D++ W   G  F IKD DRF+ E+L ++F+HN  SSFQRQ+NLYGF+K+
Sbjct:   18 APQVFARKLYQILLTESKDVICWNEPGTAFFIKDMDRFSQEVLMKYFRHNNYSSFQRQMNLYGFKKI 84          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|166576 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YVU6_9STRA6.000e-51100.00Heat shock transcription factor n=1 Tax=Tribonema ... [more]
A0A835ZDM3_9STRA2.310e-2365.67HSF-type DNA-binding-domain-containing protein n=1... [more]
A0A7S2BSE7_9STRA8.880e-1756.72Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S2G7U9_9STRA1.970e-1655.22Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A6H5JVV9_9PHAE2.230e-1659.70HSF_DOMAIN domain-containing protein n=2 Tax=Ectoc... [more]
A0A7S2CXJ7_9STRA1.900e-1555.22Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S2R5C8_9STRA6.470e-1552.24Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6V1QFS1_HETAK8.020e-1552.24Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A835Z6Z9_9STRA1.710e-1450.75HSF-type DNA-binding-domain-containing protein (Fr... [more]
A0A6V2VRS5_HETAK3.750e-1449.25Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000232Heat shock factor (HSF)-type, DNA-bindingPRINTSPR00056HSFDOMAINcoord: 14..37
score: 15.0
coord: 65..77
score: 78.46
coord: 52..64
score: 51.87
IPR000232Heat shock factor (HSF)-type, DNA-bindingSMARTSM00415hsfneu3coord: 11..82
e-value: 9.6E-11
score: 51.7
IPR000232Heat shock factor (HSF)-type, DNA-bindingPFAMPF00447HSF_DNA-bindcoord: 15..78
e-value: 2.0E-20
score: 73.2
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 12..82
e-value: 8.5E-22
score: 79.0
IPR027725Heat shock transcription factor familyPANTHERPTHR10015HEAT SHOCK TRANSCRIPTION FACTORcoord: 15..79
NoneNo IPR availablePANTHERPTHR10015:SF349HEAT SHOCK FACTOR PROTEINcoord: 15..79
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 14..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_45contigContig_45:380378..380832 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|166576mRNA_6080Tribonema minus UTEX_B_3156 mRNAContig_45 380378..380832 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|166576|e_gw1.45.91.1 ID=Trimin1|166576|e_gw1.45.91.1|Name=jgi.p|Trimin1|166576|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=83bp
MSCVLLLHLQAPALFISALVEILGGLNNDIVSWTASGKGFIIKDSDRFAN
EILQRHFKHNRLSSFQRQLNLYGFRKVRYTRP*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000232HSF_DNA-bd
IPR036388WH-like_DNA-bd_sf
IPR027725HSF_fam
IPR036390WH_DNA-bd_sf