mRNA_6112 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|166523
Unique NamemRNA_6112
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|166523 vs. uniprot
Match: A0A835YSL8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSL8_9STRA)

HSP 1 Score: 308 bits (790), Expect = 3.580e-106
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 1 
Query:    1 MAFNVRQSAVKFLEGFTRASSKPNLYSNRSQRGMYAGKDVRFGNKTCFSAKKSRRKWLPNVQSKRLWSELLREHIPLKVTTAALRGVDKAGGLDNYLLYTTDDRLRSSQVSAINGRVVEAIEEAGDEDDEGGREGEGEGADAGLHVQGDKAGTMPSMS 474
            MAFNVRQSAVKFLEGFTRASSKPNLYSNRSQRGMYAGKDVRFGNKTCFSAKKSRRKWLPNVQSKRLWSELLREHIPLKVTTAALRGVDKAGGLDNYLLYTTDDRLRSSQVSAINGRVVEAIEEAGDEDDEGGREGEGEGADAGLHVQGDKAGTMPSMS
Sbjct:    1 MAFNVRQSAVKFLEGFTRASSKPNLYSNRSQRGMYAGKDVRFGNKTCFSAKKSRRKWLPNVQSKRLWSELLREHIPLKVTTAALRGVDKAGGLDNYLLYTTDDRLRSSQVSAINGRVVEAIEEAGDEDDEGGREGEGEGADAGLHVQGDKAGTMPSMS 158
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BLAST of jgi.p|Trimin1|166523 vs. uniprot
Match: A0A6H5KS33_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KS33_9PHAE)

HSP 1 Score: 112 bits (279), Expect = 1.570e-28
Identity = 71/149 (47.65%), Postives = 88/149 (59.06%), Query Frame = 1 
Query:   13 VRQSAVKFLEGFTRASSKPNL--YSNRSQRGMYAGKDVRFGNKTCFSAKKSRRKWLPNVQSKRLWSELLREHIPLKVTTAALRGVDKAGGLDNYLLYTTDDRLRSSQVSAINGRVVEAIEEAGDEDDE---GGREGEGEGADAGLHVQG 444
            +R++ V  L+   R    P    +S RSQ G+YAGKD+ FGN   FS KK+RR W PNVQ K L+SE L E I   +TT ALR VD+AGG+D YLL T D+ L S Q S    ++ EA+   GD   E   G  EG   GADAGL  +G
Sbjct:    4 LRRNTVGCLQTLARGCKNPKKPQHSKRSQIGLYAGKDIGFGNTISFSHKKNRRTWKPNVQKKALYSETLDEWIKFNLTTHALRCVDRAGGIDKYLLKTPDEWLNSVQGSKAKRKIEEALAARGDSSGELHAGEEEG---GADAGLRAEG 149
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BLAST of jgi.p|Trimin1|166523 vs. uniprot
Match: A0A7S2HHC9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HHC9_9STRA)

HSP 1 Score: 106 bits (264), Expect = 9.550e-27
Identity = 53/111 (47.75%), Postives = 73/111 (65.77%), Query Frame = 1 
Query:   34 FLEGFTRASSKPNLYSNRSQRGMYAGKDVRFGNKTCFSAKKSRRKWLPNVQSKRLWSELLREHIPLKVTTAALRGVDKAGGLDNYLLYTTDDRLRSSQVSAINGRVVEAIE 366
            F  GFT   + P   S R+ RG++ GKDVRFGNK   S +K+RR W PNVQ K+LWSE L++++   +T  A+R VDKAGG+DNYLL   D  L+S Q  A   +++E ++
Sbjct:    1 FSFGFTMFRTIPARTSGRALRGLFGGKDVRFGNKVSHSERKTRRMWKPNVQRKKLWSETLQDYLRFNMTVHAMRCVDKAGGVDNYLLAIPDKDLKSDQGLAAKCKIIEKLQ 111
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BLAST of jgi.p|Trimin1|166523 vs. uniprot
Match: A0A8K1CD55_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CD55_PYTOL)

HSP 1 Score: 104 bits (259), Expect = 7.870e-26
Identity = 55/117 (47.01%), Postives = 76/117 (64.96%), Query Frame = 1 
Query:   22 SAVKFLEGFTRASSKPNLYSNRSQRGMYAGKDVRFGNKTCFSAKKSRRKWLPNVQSKRLWSELLREHIPLKVTTAALRGVDKAGGLDNYLLYTTDDRLRSSQVSAINGRVVEAIEEA 372
            ++++FLE FTR+++K    S R+ RG++AG+D  FGN   FS +K+RR W  N Q K L+SE L E + L VTT  LR +DKAGGLDNYLL    +R    +  A   R++EA+E A
Sbjct:    2 ASMQFLEAFTRSAAKREHISGRALRGLFAGRDKAFGNNVSFSKRKTRRSWKVNHQWKHLYSEALDEKVGLNVTTHTLRCIDKAGGLDNYLLSLKTERELGVKGLAARNRILEALENA 118
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BLAST of jgi.p|Trimin1|166523 vs. uniprot
Match: A0A4P9XQE4_9FUNG (Uncharacterized protein (Fragment) n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XQE4_9FUNG)

HSP 1 Score: 102 bits (255), Expect = 1.040e-25
Identity = 50/79 (63.29%), Postives = 63/79 (79.75%), Query Frame = 1 
Query:   85 RSQRGMYAGKDVRFGNKTCFSAKKSRRKWLPNVQSKRLWSELLREHIPLKVTTAALRGVDKAGGLDNYLLYTTDDRLRS 321
            R+QRG++AGK ++FGN   FS KK+RR WLPNVQ KRL+SE+L   + LKVTTAALR +DK GGLDNYLL T +++L S
Sbjct:    4 RAQRGLFAGKHIQFGNNKPFSLKKTRRIWLPNVQRKRLYSEILGSMVQLKVTTAALRTIDKKGGLDNYLLKTREEKLNS 82
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BLAST of jgi.p|Trimin1|166523 vs. uniprot
Match: A0A4P9Z1Z0_9FUNG (Uncharacterized protein (Fragment) n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9Z1Z0_9FUNG)

HSP 1 Score: 103 bits (256), Expect = 1.190e-25
Identity = 51/79 (64.56%), Postives = 62/79 (78.48%), Query Frame = 1 
Query:   85 RSQRGMYAGKDVRFGNKTCFSAKKSRRKWLPNVQSKRLWSELLREHIPLKVTTAALRGVDKAGGLDNYLLYTTDDRLRS 321
            R+QRG++AGK ++FGN   FS KK+RR WLPNVQSKRL+SE+L   +  KVT AALR +DK GGLDNYLL T DD+L S
Sbjct:   10 RAQRGLFAGKHIQFGNNKPFSLKKTRRVWLPNVQSKRLYSEILGRVVRFKVTAAALRTIDKKGGLDNYLLGTRDDKLAS 88
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BLAST of jgi.p|Trimin1|166523 vs. uniprot
Match: A0A1X2H267_SYNRA (Ribosomal L28 family-domain-containing protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2H267_SYNRA)

HSP 1 Score: 102 bits (254), Expect = 3.180e-25
Identity = 48/94 (51.06%), Postives = 68/94 (72.34%), Query Frame = 1 
Query:   85 RSQRGMYAGKDVRFGNKTCFSAKKSRRKWLPNVQSKRLWSELLREHIPLKVTTAALRGVDKAGGLDNYLLYTTDDRLRSSQVSAINGRVVEAIE 366
            R+QRG++ GK ++FGN   FS KK+RR WLPNVQSK+L+S+ L++ I LKVTT+ LR +DK GGLD YLL T D  L S +   + G++  +++
Sbjct:   16 RAQRGLFGGKHIQFGNNNPFSKKKTRRTWLPNVQSKKLYSDALQKFIDLKVTTSILRTIDKKGGLDRYLLDTRDKNLFSEKALELKGQITRSLQ 109
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BLAST of jgi.p|Trimin1|166523 vs. uniprot
Match: A0A8H7PGI2_MORIS (Uncharacterized protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7PGI2_MORIS)

HSP 1 Score: 101 bits (252), Expect = 6.940e-25
Identity = 50/93 (53.76%), Postives = 64/93 (68.82%), Query Frame = 1 
Query:   85 RSQRGMYAGKDVRFGNKTCFSAKKSRRKWLPNVQSKRLWSELLREHIPLKVTTAALRGVDKAGGLDNYLLYTTDDRLRSSQVSAINGRVVEAI 363
            R+QRG++ GK ++FGN   FS KK+RR WLPNVQSK+L+SELL  H  LKVTT+ LR +DK GGLD YLL T D  L S +   +   + + I
Sbjct:   17 RAQRGLFGGKHIQFGNNNPFSKKKTRRSWLPNVQSKKLYSELLDSHFDLKVTTSVLRTIDKKGGLDKYLLDTRDKNLFSDKALTMKKDLQQVI 109
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BLAST of jgi.p|Trimin1|166523 vs. uniprot
Match: A0A7S2C450_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C450_9STRA)

HSP 1 Score: 101 bits (252), Expect = 1.280e-24
Identity = 53/99 (53.54%), Postives = 64/99 (64.65%), Query Frame = 1 
Query:   79 SNRSQRGMYAGKDVRFGNKTCFSAKKSRRKWLPNVQSKRLWSELLREHIPLKVTTAALRGVDKAGGLDNYLLYTTDDRLRSSQVSAINGRVVEAIEEAG 375
            S R+ RG+Y GKDV FGN    S +K+RR W PNVQ KRLWSE L + +   VTT A+R VDKAGGLDNYLL   D ++ S Q  A   R+  A+ E G
Sbjct:   42 SGRAARGLYGGKDVGFGNMVSHSERKTRRMWKPNVQKKRLWSESLGDWVKFNVTTQAMRCVDKAGGLDNYLLGLKDGKIGSIQGLAAKRRIEAALAEKG 140
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BLAST of jgi.p|Trimin1|166523 vs. uniprot
Match: A0A1C7N7C3_9FUNG (54S ribosomal protein L24, mitochondrial n=1 Tax=Choanephora cucurbitarum TaxID=101091 RepID=A0A1C7N7C3_9FUNG)

HSP 1 Score: 100 bits (250), Expect = 1.690e-24
Identity = 48/90 (53.33%), Postives = 63/90 (70.00%), Query Frame = 1 
Query:   85 RSQRGMYAGKDVRFGNKTCFSAKKSRRKWLPNVQSKRLWSELLREHIPLKVTTAALRGVDKAGGLDNYLLYTTDDRLRSSQVSAINGRVV 354
            R+QRG++ GK ++FGN   FS KK+RR WLPNVQSK ++SE L E I LKVTT+ LR +DK GGLD YLL T D  L S +   +  +++
Sbjct:   17 RAQRGLFGGKHIQFGNNNPFSKKKTRRNWLPNVQSKNIYSESLSEFIKLKVTTSVLRTIDKKGGLDKYLLDTKDKNLFSEKAVELKNKII 106
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BLAST of jgi.p|Trimin1|166523 vs. uniprot
Match: A0A835YWF8_9STRA (Lipase_3 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWF8_9STRA)

HSP 1 Score: 335 bits (860), Expect = 1.100e-116
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 1 
Query:    1 MACLAAYDIASNFALPDELSLYTFGAPRVGNAAFARRLDARVRQHFRVVNDGDLIAGLPQFLGTYRHAGCKVVTDSEKFGTFIVEPTIVENTFGIKASTLITVHPLREYRECLEACLGDEDLQEYMAKGYAMAHAVDSCQPLTPPRVLPDWLKERRKRSLQEP 489
            MACLAAYDIASNFALPDELSLYTFGAPRVGNAAFARRLDARVRQHFRVVNDGDLIAGLPQFLGTYRHAGCKVVTDSEKFGTFIVEPTIVENTFGIKASTLITVHPLREYRECLEACLGDEDLQEYMAKGYAMAHAVDSCQPLTPPRVLPDWLKERRKRSLQEP
Sbjct:    1 MACLAAYDIASNFALPDELSLYTFGAPRVGNAAFARRLDARVRQHFRVVNDGDLIAGLPQFLGTYRHAGCKVVTDSEKFGTFIVEPTIVENTFGIKASTLITVHPLREYRECLEACLGDEDLQEYMAKGYAMAHAVDSCQPLTPPRVLPDWLKERRKRSLQEP 163
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BLAST of jgi.p|Trimin1|166523 vs. uniprot
Match: D7G482_ECTSI (Lipase domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G482_ECTSI)

HSP 1 Score: 195 bits (495), Expect = 1.290e-54
Identity = 92/162 (56.79%), Postives = 118/162 (72.84%), Query Frame = 1 
Query:    1 MACLAAYDIASNFALPDELSLYTFGAPRVGNAAFARRLDARVRQHFRVVNDGDLIAGLPQFLGTYRHAGCKVVTDSEKFGTFIVEPTIVENTFGIKASTLITVHPLREYRECLEACLGDEDLQEYMAKGYAMAHAVDSCQPLTPPRVLPDWLKERRKRSLQE 486
            +A LAAYDI  NF LPD  +LYTFG+PRVGN  FAR+LD+RV+ HFR+VNDGDLI  LP+F GTY+HAGCKVV DSE++G FIV PT+VE TFG K    +T H L +YRECLEAC+ + DL++Y ++G      VD       P ++P+WLK RR+R  ++
Sbjct: 1255 LASLAAYDIDKNFTLPDPTTLYTFGSPRVGNGVFARKLDSRVKHHFRLVNDGDLITALPRFFGTYKHAGCKVVVDSERYGNFIVAPTLVEQTFGAKPLASLTPHLLNQYRECLEACMEEADLEDYFSRGIG----VD-------PTLVPEWLKGRRRRRKED 1405
[Close]
BLAST of jgi.p|Trimin1|166523 vs. uniprot
Match: A0A7S2H3L5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H3L5_9STRA)

HSP 1 Score: 111 bits (277), Expect = 3.510e-26
Identity = 58/124 (46.77%), Postives = 76/124 (61.29%), Query Frame = 1 
Query:    1 MACLAAYDIASNFALPDELSLYTFGAPRVGNAAFARRLDARVRQHFRVVNDGDLIAGLPQFLGTYRHAGCKVVTDSEKFGTFIVEPTIVENTFGIKASTLITVHPLREYRECLEACLGDEDLQE 372
            +A LAA D+A++  LPD +++YTFGAP VGN A A   +  V  HFRVV DGD I   P+  G Y+H+G +V+ D++  G  IV+P  +E          I  H LR YR+CLEACL DED  E
Sbjct:  176 LAVLAARDLATSLDLPDPITVYTFGAPCVGNLALALETNNLVPHHFRVVVDGDSITHPPRPFGPYQHSGRQVLVDADCLGNVIVDPVTIETLGRRPTKASIHCHKLRTYRDCLEACLDDEDQLE 299
[Close]
BLAST of jgi.p|Trimin1|166523 vs. uniprot
Match: A0A6H5KLM1_9PHAE (Lipase_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLM1_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 2.350e-24
Identity = 48/69 (69.57%), Postives = 58/69 (84.06%), Query Frame = 1 
Query:    1 MACLAAYDIASNFALPDELSLYTFGAPRVGNAAFARRLDARVRQHFRVVNDGDLIAGLPQFLGTYRHAG 207
            +A LAAYDI  NF LPD ++LYTFG+PRVGN  FAR+LD+RV+ HFR+VNDGDLI  LP+F GTY+HAG
Sbjct: 1241 LASLAAYDIDKNFTLPDPMTLYTFGSPRVGNGVFARKLDSRVKHHFRLVNDGDLITALPRFFGTYKHAG 1309
[Close]
BLAST of jgi.p|Trimin1|166523 vs. uniprot
Match: A0A1V9ZIX8_9STRA (Lipase_3 domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZIX8_9STRA)

HSP 1 Score: 105 bits (262), Expect = 2.650e-23
Identity = 52/117 (44.44%), Postives = 72/117 (61.54%), Query Frame = 1 
Query:    1 MACLAAYDIASNFALPDELSLYTFGAPRVGNAAFARRLDARVRQHFRVVNDGDLIAGLPQFLGTYRHAGCKVVTDSEKFGTFIVEPTIVENTFGIKASTLITVHPLREYRECLEACL 351
            +A LAAYD+A++F++P  + +Y FG PRVGN AF R+ D RV   FRVV DGDL+AG+P+F G Y H G +V  D    G  +V+P+ +E    + + T +  H    YR  L  CL
Sbjct:  717 LAVLAAYDVATHFSVP--VHMYNFGGPRVGNPAFVRQYDRRVPDSFRVVFDGDLVAGIPRFWGLYEHVGSEVAIDGA--GNVLVDPSFIERRLLVSSKTKVASHATLVYRTALRTCL 829
[Close]
BLAST of jgi.p|Trimin1|166523 vs. uniprot
Match: A0A6G0WXM8_9STRA (Lipase_3 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WXM8_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 2.730e-21
Identity = 50/122 (40.98%), Postives = 74/122 (60.66%), Query Frame = 1 
Query:    1 MACLAAYDIASNFALPDELSLYTFGAPRVGNAAFARRLDARVRQHFRVVNDGDLIAGLPQFLGTYRHAGCKVVTDSEKFGTFIVEPTIVENTFGIKASTLITVHPLREYRECLEACLGDEDL 366
            +A LAAYD A +F +  ++++Y FG PRVGN AF R+ +  V   +RVV DGDL+AG+P+F G Y+H G +V  D  + G  IV+P+ +E     +  T + VH +  YR  L  C  + +L
Sbjct:  699 LAILAAYDCAVHFNI--DVNMYNFGGPRVGNPAFVRQYNRAVPNSYRVVLDGDLVAGIPKFWGLYQHVGTEVAID--EMGNLIVDPSFIERRLQQRTKTRVAVHGMMMYRSMLRKCFDNLEL 816
[Close]
BLAST of jgi.p|Trimin1|166523 vs. uniprot
Match: T0R3G9_SAPDV (Lipase_3 domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0R3G9_SAPDV)

HSP 1 Score: 99.4 bits (246), Expect = 3.720e-21
Identity = 50/117 (42.74%), Postives = 70/117 (59.83%), Query Frame = 1 
Query:    1 MACLAAYDIASNFALPDELSLYTFGAPRVGNAAFARRLDARVRQHFRVVNDGDLIAGLPQFLGTYRHAGCKVVTDSEKFGTFIVEPTIVENTFGIKASTLITVHPLREYRECLEACL 351
            +A LAAYDIA++F     +S+Y FG PRVGN AF R+ +  V + FRVV DGDL+AG+P+F G Y H G +V  D    G  +++P+ +E    + + T +  H    YR  L  CL
Sbjct:  708 LAVLAAYDIAAHFGAT-RVSMYNFGGPRVGNPAFVRQYNRTVPESFRVVYDGDLVAGIPRFWGLYEHVGREVAIDGA--GNVLLDPSFIERRLLVSSKTKVASHATLVYRNALRLCL 821
[Close]
BLAST of jgi.p|Trimin1|166523 vs. uniprot
Match: A0A8K1CK27_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CK27_PYTOL)

HSP 1 Score: 97.8 bits (242), Expect = 1.300e-20
Identity = 47/117 (40.17%), Postives = 70/117 (59.83%), Query Frame = 1 
Query:    1 MACLAAYDIASNFALPDELSLYTFGAPRVGNAAFARRLDARVRQHFRVVNDGDLIAGLPQFLGTYRHAGCKVVTDSEKFGTFIVEPTIVENTFGIKASTLITVHPLREYRECLEACL 351
            +A LAAYD+A N ++  ++++Y FG PRVGN +F R  D  V   +R+V DGD++ G+P F G Y+HAG ++  D E  G  IV+P+ VE    + +   +  HP   YR  +  CL
Sbjct:  791 LAILAAYDLAVNLSM--KVNMYNFGGPRVGNPSFVRLYDKCVPTSYRIVMDGDIVPGVPDFWGLYQHAGTEISIDLE--GNLIVDPSFVEKKLHVSSKRQVATHPTHVYRSSMAKCL 903
[Close]
BLAST of jgi.p|Trimin1|166523 vs. uniprot
Match: A0A448ZD21_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZD21_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 1.820e-20
Identity = 50/115 (43.48%), Postives = 67/115 (58.26%), Query Frame = 1 
Query:   43 LPDELSLYTFGAPRVGNAAFARRLDARVRQHFRVVNDGDLIAGLPQFL---GTYRHAGCKVVTDSEKFGTFIVEPTIVENTFGI-KASTLITVHPLREYRECLEACLGDEDLQEY 375
            L   + +YT+G PRVGN AF+R    RV   FRVVN+GD I  +P +L   G Y+HAG +V+ D+   G  +V PT+VE  F   K  T +  H ++ YRECLE      +L EY
Sbjct: 1022 LQPAVGVYTYGQPRVGNKAFSRLYKQRVPHSFRVVNEGDAITTIPNYLWCGGLYKHAGLEVILDAGMTGNVLVGPTVVETLFRFHKVRTNVMAHQMQRYRECLECIFDPSELLEY 1136
[Close]
BLAST of jgi.p|Trimin1|166523 vs. uniprot
Match: A0A1W0A2H2_9STRA (Lipase_3 domain-containing protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A2H2_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 6.020e-20
Identity = 49/117 (41.88%), Postives = 69/117 (58.97%), Query Frame = 1 
Query:    1 MACLAAYDIASNFALPDELSLYTFGAPRVGNAAFARRLDARVRQHFRVVNDGDLIAGLPQFLGTYRHAGCKVVTDSEKFGTFIVEPTIVENTFGIKASTLITVHPLREYRECLEACL 351
            +A  AAYD A +F +P+ + +Y FG PRVGN AF R+ + +V   FR+V DGDL+AG+P+F G Y H G +V  D    G  IV+P+ VE    + + T +  H    YR  L  C+
Sbjct:  714 LAICAAYDCAVHFNIPN-IHMYNFGGPRVGNPAFVRQYNNKVPNSFRIVFDGDLVAGIPRFWGLYEHVGSEVAIDDA--GNVIVDPSFVERRLLVSSKTKVASHATLVYRTGLRNCM 827
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|166523 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YSL8_9STRA3.580e-106100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5KS33_9PHAE1.570e-2847.65Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2HHC9_9STRA9.550e-2747.75Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A8K1CD55_PYTOL7.870e-2647.01Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A4P9XQE4_9FUNG1.040e-2563.29Uncharacterized protein (Fragment) n=1 Tax=Thamnoc... [more]
A0A4P9Z1Z0_9FUNG1.190e-2564.56Uncharacterized protein (Fragment) n=1 Tax=Synceph... [more]
A0A1X2H267_SYNRA3.180e-2551.06Ribosomal L28 family-domain-containing protein n=1... [more]
A0A8H7PGI2_MORIS6.940e-2553.76Uncharacterized protein n=1 Tax=Mortierella isabel... [more]
A0A7S2C450_9STRA1.280e-2453.54Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A1C7N7C3_9FUNG1.690e-2453.3354S ribosomal protein L24, mitochondrial n=1 Tax=C... [more]

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BLAST of jgi.p|Trimin1|166523 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YWF8_9STRA1.100e-116100.00Lipase_3 domain-containing protein n=1 Tax=Tribone... [more]
D7G482_ECTSI1.290e-5456.79Lipase domain protein n=1 Tax=Ectocarpus siliculos... [more]
A0A7S2H3L5_9STRA3.510e-2646.77Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6H5KLM1_9PHAE2.350e-2469.57Lipase_3 domain-containing protein n=1 Tax=Ectocar... [more]
A0A1V9ZIX8_9STRA2.650e-2344.44Lipase_3 domain-containing protein n=1 Tax=Achlya ... [more]
A0A6G0WXM8_9STRA2.730e-2140.98Lipase_3 domain-containing protein n=1 Tax=Aphanom... [more]
T0R3G9_SAPDV3.720e-2142.74Lipase_3 domain-containing protein n=2 Tax=Saprole... [more]
A0A8K1CK27_PYTOL1.300e-2040.17Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A448ZD21_9STRA1.820e-2043.48Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A1W0A2H2_9STRA6.020e-2041.88Lipase_3 domain-containing protein (Fragment) n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_45contigContig_45:605744..607101 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|166523|e_gw1.45.137.1
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
KEGG ModuleM00178
KEGG Pathwayko03010,map03010
KEGG koko:K02902
GOsGO:0000313,GO:0000315,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005761,GO:0005762,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0031974,GO:0032543,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0070013,GO:0071704,GO:0098798,GO:0140053,GO:1901564,GO:1901566,GO:1901576,GO:1990904
Descriptionmitochondrial translation
COG categoryJ
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0227@1|root,KOG3278@2759|Eukaryota
Evalue4.55e-30
Seed ortholog2880.D7G9G5
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRibosomal protein L28
Ec32 orthologEc-28_000830.1
TranscriptId166845
TrackFilteredModels1
ProteinId166523
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|166523gene_6112Tribonema minus UTEX_B_3156 geneContig_45 605744..607101 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|166523Trimin1|166523|e_gw1.45.137.1Tribonema minus UTEX_B_3156 polypeptideContig_45 605744..607101 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_6112_3exon_6112_3Tribonema minus UTEX_B_3156 exonContig_45 605744..605879 -
exon_6112_2exon_6112_2Tribonema minus UTEX_B_3156 exonContig_45 606574..606696 -
exon_6112_1exon_6112_1Tribonema minus UTEX_B_3156 exonContig_45 606884..607101 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_6112CDS_6112Tribonema minus UTEX_B_3156 CDSContig_45 606884..607101 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_6112 ID=mRNA_6112|Name=jgi.p|Trimin1|166523|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=477bp|location=Sequence derived from alignment at Contig_45:605744..607101- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGTTCAATGTCAGACAGAGCGCCGTTAAATTTTTGGAAGGGTTCAC
GCGGGCAAGCAGCAAGCCTAACCTGTACAGCAACAGGTCACAGAGAGGCA
TGTACGCTGGGAAGGACGTGAGATTTGGTAACAAGACATGCTTCAGCGCC
AAGAAGTCCCGCAGGAAGTGGCTGCCCAACGTGCAGAGCAAGCGGCTGTG
GAGTGAACTGCTGCGAGAGCATATCCCGCTGAAGGTCACAACCGCTGCCC
TGAGGGGAGTGGACAAGGCAGGAGGGTTGGATAACTACCTGCTGTATACA
ACAGACGACAGGCTGCGTAGTTCACAGGTGAGCGCCATCAACGGCAGAGT
GGTCGAGGCTATCGAGGAGGCGGGGGACGAGGATGATGAAGGGGGGCGCG
AAGGGGAAGGGGAGGGGGCAGATGCGGGGCTGCACGTGCAGGGGGACAAG
GCGGGCACTATGCCGTCCATGTCCTGA
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protein sequence of jgi.p|Trimin1|166523

>Trimin1|166523|e_gw1.45.137.1 ID=Trimin1|166523|e_gw1.45.137.1|Name=jgi.p|Trimin1|166523|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=159bp
MAFNVRQSAVKFLEGFTRASSKPNLYSNRSQRGMYAGKDVRFGNKTCFSA
KKSRRKWLPNVQSKRLWSELLREHIPLKVTTAALRGVDKAGGLDNYLLYT
TDDRLRSSQVSAINGRVVEAIEEAGDEDDEGGREGEGEGADAGLHVQGDK
AGTMPSMS*
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mRNA from alignment at Contig_45:605744..607101-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_6112 ID=mRNA_6112|Name=jgi.p|Trimin1|166523|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1358bp|location=Sequence derived from alignment at Contig_45:605744..607101- (Tribonema minus UTEX_B_3156 )
ATGGCGTTCAATGTCAGACAGAGCGCCGTTAAATTTTTGGAAGGGTTCAC
GCGGGCAAGCAGCAAGCCTAACCTGTACAGCAACAGGTCACAGAGAGGCA
TGTACGCTGGGAAGGACGTGAGATTTGGTAACAAGACATGCTTCAGCGCC
AAGAAGTCCCGCAGGAAGTGGCTGCCCAACGTGCAGAGCAAGCGGCTGTG
GAGTGAACTGCTGCGAGAGTGAGTCTTGATAGTGATTTTTTTTTGCTTAC
GCTATGAGTATGCAATATGTGTTTCATGCACACGTTTGTGGCTGAAATGT
CTCAGACTTGTATCTTGTACTGTTGTCGCGATTTACCATTGGCCGAACAG
CACTCGAAACGCCGCTGGAAGCGCGCGTATCTCACACCGTCTTACCCACA
TGCAGGCATATCCCGCTGAAGGTCACAACCGCTGCCCTGAGGGGAGTGGA
CAAGGCAGGAGGGTTGGATAACTACCTGCTGTATACAACAGACGACAGGC
TGCGTAGTTCACAGGTGAGCGCCATCAAGTGTCACAGTTGTGCTGGTGCG
TCCCCGCGGTCACAGCAAGGAAAGTCACTAGCTGAACTCGCTTTGCATTC
TGTCATTGGCTCAGTGACTATCAAAGTGCATGATCTGAACCACTGCGAAG
ACACTGTGGTATCTCCTCCATATGACAAAGCAGTGACGATGTTGTTCGGG
CAAACTATATGGCATGCAGGATTGACGCTTTCAGCTTTATTTCGGGGCAA
AGGTCGACCATCCTAGATTGTGGTGCATGAAACGAGATGCCACACCATGA
CACTGTACAATATCAGCTTGAGTATGAAACCTAGGCGGTAGCACTACCAT
GATATCTAGTCACTGCGTCTGCTTCATGTCAGTTCAGAGACACGTGCAAT
CGCAGACATGTGATGGACTGTGCCAATGACCTGTTTGCACAGCTCGTGAG
CACGCACGGCACTACCAGAACAGGGCGCGCAGCAGCACGCAATGTGCATG
GAGCTACCTGGACTGGACTGCTCCCATGCGGTGCAATCGCACGCACCTGC
CACTTTCAAGATGACCACCGACCTCACTGTCTAAAACCGCGATGCGACGT
CTCCTCGCGCAGGCCGCAGCTGTCAAGTCGCGCATCCTGGAGATGCTCGG
CGACGGCGCGCAGGCGCGAATACAGGCGGTGCATGACACGCTGCGGCGAC
AGCTCACGGGGCTGGCCGGCAGCGGCAGAGTGGTCGAGGCTATCGAGGAG
GCGGGGGACGAGGATGATGAAGGGGGGCGCGAAGGGGAAGGGGAGGGGGC
AGATGCGGGGCTGCACGTGCAGGGGGACAAGGCGGGCACTATGCCGTCCA
TGTCCTGA
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Coding sequence (CDS) from alignment at Contig_45:605744..607101-

>mRNA_6112 ID=mRNA_6112|Name=jgi.p|Trimin1|166523|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=477bp|location=Sequence derived from alignment at Contig_45:605744..607101- (Tribonema minus UTEX_B_3156 )
ATGGCGTTCAATGTCAGACAGAGCGCCGTTAAATTTTTGGAAGGGTTCAC
GCGGGCAAGCAGCAAGCCTAACCTGTACAGCAACAGGTCACAGAGAGGCA
TGTACGCTGGGAAGGACGTGAGATTTGGTAACAAGACATGCTTCAGCGCC
AAGAAGTCCCGCAGGAAGTGGCTGCCCAACGTGCAGAGCAAGCGGCTGTG
GAGTGAACTGCTGCGAGAGCATATCCCGCTGAAGGTCACAACCGCTGCCC
TGAGGGGAGTGGACAAGGCAGGAGGGTTGGATAACTACCTGCTGTATACA
ACAGACGACAGGCTGCGTAGTTCACAGGTGAGCGCCATCAACGGCAGAGT
GGTCGAGGCTATCGAGGAGGCGGGGGACGAGGATGATGAAGGGGGGCGCG
AAGGGGAAGGGGAGGGGGCAGATGCGGGGCTGCACGTGCAGGGGGACAAG
GCGGGCACTATGCCGTCCATGTCCTGA
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