Trimin1|166481|e_gw1.44.117.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|166481
Unique NameTrimin1|166481|e_gw1.44.117.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length351
Homology
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BLAST of jgi.p|Trimin1|166481 vs. uniprot
Match: A0A836CCF2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCF2_9STRA)

HSP 1 Score: 327 bits (837), Expect = 2.890e-107
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0 
Query:    1 MLDLRDNRRVTELPDVYLSKLTQLQTLALGGCSRLKCIPEEVGKSRSLTALDLGGCYELALDNTWSAGVFASLRTLILGSRSEXXXXXXXXXXXXXXXXXXXXXXLTSIPDDISKLTKLTRLRLGGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQLARGDFRENRFRDRLRVGGIDDLIPDLTDREGEQGKLTKLTLGGRLTSLPEAIGNLVTLTALSAAGCTEL 231
            MLDLRDNRRVTELPDVYLSKLTQLQTLALGGCSRLKCIPEEVGKSRSLTALDLGGCYELALDNTWSAGVFASLRTLILGSRSEXXXXXXXXXXXXXXXXXXXXXXLTSIPDDISKLTKLTRLRLGGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQLARGDFRENRFRDRLRVGGIDDLIPDLTDREGEQGKLTKLTLGGRLTSLPEAIGNLVTLTALSAAGCTEL
Sbjct:    1 MLDLRDNRRVTELPDVYLSKLTQLQTLALGGCSRLKCIPEEVGKSRSLTALDLGGCYELALDNTWSAGVFASLRTLILGSRSEXXXXXXXXXXXXXXXXXXXXXXLTSIPDDISKLTKLTRLRLGGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQLARGDFRENRFRDRLRVGGIDDLIPDLTDREGEQGKLTKLTLGGRLTSLPEAIGNLVTLTALSAAGCTEL 231
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|166481 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CCF2_9STRA2.890e-107100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 185..351
e-value: 4.8E-35
score: 122.6
coord: 1..169
e-value: 1.1E-31
score: 111.5
IPR001611Leucine-rich repeatPFAMPF00560LRR_1coord: 315..334
e-value: 1.5
score: 9.7
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 188..351
coord: 2..162
NoneNo IPR availablePANTHERPTHR16083:SF25SUBFAMILY NOT NAMEDcoord: 188..351
coord: 2..162
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..32
score: 5.0
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 2..348

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_44contigContig_44:860074..861126 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|166481mRNA_9129Tribonema minus UTEX_B_3156 mRNAContig_44 860074..861126 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|166481|e_gw1.44.117.1 ID=Trimin1|166481|e_gw1.44.117.1|Name=jgi.p|Trimin1|166481|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=351bp
MLDLRDNRRVTELPDVYLSKLTQLQTLALGGCSRLKCIPEEVGKSRSLTA
LDLGGCYELALDNTWSAGVFASLRTLILGSRSEALPEWLWKVATLETLDI
EGCFQLTSIPDDISKLTKLTRLRLGGVFQRVPDAIGNMFELKELSFSKCE
ALTSLPETVGQLARGDFRENRFRDRLRVGGIDDLIPDLTDREGEQGKLTK
LTLGGRLTSLPEAIGNLVTLTALSAAGCTELTRLPASLIYLRNLAELDLT
GCLALSSLPDRLDLLQKLTALTLSRCEGLKRLPQSVGLLKNLQCLDVSGC
TALISLPESLGQLENLEKLDLRNCDRVHWLPDSLYRLVGLKMLEVRGCSG
L
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt