Trimin1|349457|estExt_Genemark1.C_Ctg_430048 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|349457
Unique Name	Trimin1\|349457\|estExt_Genemark1.C_Ctg_430048
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	612

Homology

[Close]

BLAST of jgi.p|Trimin1|349457 vs. uniprot
Match: A0A836CCM1_9STRA (USP domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCM1_9STRA)

HSP 1 Score: 932 bits (2408), Expect = 0.000e+0
Identity = 612/612 (100.00%), Postives = 612/612 (100.00%), Query Frame = 0

Query:    1 MLLLXXXXXXXXXXLPLLQGNSCYLNSALQCLSHTPMLRAYLLSSMARSEVNVSNPLGTQGQLVEELSALLQQLWSGDYLCVLPVKFKRSLARHKSQFAGTDQQDGQEFLAVILDALHERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDRQEXXXXXXXXXXXDVNRVLTKPYVPAPDDAVLATMAEPEKAADAWNRHVLRNRSVIVDLFQGQLKMECKCSECGKSSVSFDPFMFLSVPIPPRDDKFVAVLLVRRMRHRDSVEQYVPSSPVRFGFTLPRLSQVGALLAALAEVAGLDSQALALADVFRGQCVKVYDAEASLAVIREEDFLVAYEKTWRAKETPAQPSKGGAPSPPSGLLPLKLQALPLPWCSVAAVGAAAAQSAGGAPXXXXXXXXXXXXXXXXPQLLAGSRGASSTLKASSPVGKSLFLQSASGSDYASSHGSFTDVEDETEANXXXXXXXXXXXXXXXXXXXXXXXXAAWPTSFAGIRAGLRLDALDSRGTWYSGTVAELDGVGEARRARVHFDDFDARWDEGFDAAAWGEGKLAPXXXXXXXXXXXXXXXXXLFSKSAAVARGPHGWVTAINLRHAAPPAPSIAQAGRPPAAASGL 612
            MLLLXXXXXXXXXXLPLLQGNSCYLNSALQCLSHTPMLRAYLLSSMARSEVNVSNPLGTQGQLVEELSALLQQLWSGDYLCVLPVKFKRSLARHKSQFAGTDQQDGQEFLAVILDALHERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDRQEXXXXXXXXXXXDVNRVLTKPYVPAPDDAVLATMAEPEKAADAWNRHVLRNRSVIVDLFQGQLKMECKCSECGKSSVSFDPFMFLSVPIPPRDDKFVAVLLVRRMRHRDSVEQYVPSSPVRFGFTLPRLSQVGALLAALAEVAGLDSQALALADVFRGQCVKVYDAEASLAVIREEDFLVAYEKTWRAKETPAQPSKGGAPSPPSGLLPLKLQALPLPWCSVAAVGAAAAQSAGGAPXXXXXXXXXXXXXXXXPQLLAGSRGASSTLKASSPVGKSLFLQSASGSDYASSHGSFTDVEDETEANXXXXXXXXXXXXXXXXXXXXXXXXAAWPTSFAGIRAGLRLDALDSRGTWYSGTVAELDGVGEARRARVHFDDFDARWDEGFDAAAWGEGKLAPXXXXXXXXXXXXXXXXXLFSKSAAVARGPHGWVTAINLRHAAPPAPSIAQAGRPPAAASGL
Sbjct:    1 MLLLXXXXXXXXXXLPLLQGNSCYLNSALQCLSHTPMLRAYLLSSMARSEVNVSNPLGTQGQLVEELSALLQQLWSGDYLCVLPVKFKRSLARHKSQFAGTDQQDGQEFLAVILDALHERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDRQEXXXXXXXXXXXDVNRVLTKPYVPAPDDAVLATMAEPEKAADAWNRHVLRNRSVIVDLFQGQLKMECKCSECGKSSVSFDPFMFLSVPIPPRDDKFVAVLLVRRMRHRDSVEQYVPSSPVRFGFTLPRLSQVGALLAALAEVAGLDSQALALADVFRGQCVKVYDAEASLAVIREEDFLVAYEKTWRAKETPAQPSKGGAPSPPSGLLPLKLQALPLPWCSVAAVGAAAAQSAGGAPXXXXXXXXXXXXXXXXPQLLAGSRGASSTLKASSPVGKSLFLQSASGSDYASSHGSFTDVEDETEANXXXXXXXXXXXXXXXXXXXXXXXXAAWPTSFAGIRAGLRLDALDSRGTWYSGTVAELDGVGEARRARVHFDDFDARWDEGFDAAAWGEGKLAPXXXXXXXXXXXXXXXXXLFSKSAAVARGPHGWVTAINLRHAAPPAPSIAQAGRPPAAASGL 612

[Close]

BLAST of jgi.p|Trimin1|349457 vs. uniprot
Match: D7FKW9_ECTSI (Similar to Ubiquitin carboxyl-terminal hydrolase 15 (Ubiquitin thiolesterase 15) (Ubiquitin-specific processing protease 15) (Deubiquitinating enzyme 15) (Unph-2) (Unph4) isoform 11 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKW9_ECTSI)

HSP 1 Score: 281 bits (718), Expect = 4.050e-78
Identity = 210/603 (34.83%), Postives = 287/603 (47.60%), Query Frame = 0

Query:   20 GNSCYLNSALQCLSHTPMLRAYLLSSMARSEVNVSNPLGTQGQLVEELSALLQQLWSGDYLCVLPVKFKRSLARHKSQFAGTDQQDGQEFLAVILDALHERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDRQEXXXXXXXXXXXDVNRVLTKPYVPAPDDAVLATMAEPEK--AADAWNRHVLRNRSVIVDLFQGQLKMECKCSECGKSSVSFDPFMFLSVPIPPRDDKFVAVLLVRRMRHRDSV-------EQYVPSS--------------PVRFGFTLPRLSQVGALLAALAEVAGLDSQALALADVFRGQCVKVYDAEASLAVIREEDFLVAYEKTW------RAK-ETPAQPSKGGAPSP-PSGLLPLKLQALPLPWCSVAAVGAAAAQSAGGAPXXXXXXXXXXXXXXXXPQLLAGSRGASSTLKAS---------------SPVGKSLFLQSASGSDYASSHGSFTDVEDETEANXXXXXXXXXXXXXXXXXXXXXXXXAAWPTSFAGIRAGLRLDALDSRGTWYSGTVAE-------------------LDGVGEARR------ARVHFDDFDARWDEGFDAAAWGEGKLAP 551
            GN+CYLNSA+QCLSHTP++RAYLLS M  +EVN  NPLGTQG+LVE+ ++LL+ LWS +YLC+ P KFKR L ++K QFAG +QQD QEFLA +LDALHE                                               DVNRV+ KPYV APDD   A     ++  A +AW+RHV RNRSVIVDLFQGQLKMEC+C+ C K SV+FDPFM+LSVPIP R++K VAV+++ R+R R  V       E    +S              PV++G  LPRL ++  L  AL+++ G+ + ++ +A + + Q +KV   +  L  +R++ ++VA E         RAK  T A      +P P P+   P K +A            A + +                      P ++       ST  A                SP      L+   G    ++  + +D  ++ EA                         +++PT    +  G RLDALD +G WY+ TV E                   L G GE ++       RVHFD F +RWDE +    W E KL P
Sbjct: 1007 GNTCYLNSAVQCLSHTPLVRAYLLSDMWAAEVNKYNPLGTQGKLVEDFASLLKSLWSQEYLCIFPSKFKRGLIKYKPQFAGNEQQDSQEFLAEMLDALHE-----------------------------------------------DVNRVIDKPYVAAPDDDDDAESGRSDQDLADEAWDRHVQRNRSVIVDLFQGQLKMECRCTVCNKKSVTFDPFMYLSVPIPVRNEKMVAVVMLPRIRTRYLVRSSGLNGEDGAMASDGGGAQFSNPRQLVPVQYGMMLPRLGELSDLKRALSDLCGIPTVSIVVAILQQNQ-IKVMQDKELLTELRDDTWVVALEMQGEINLNRRAKPSTSASRQATVSPVPTPTSSGPTKPEAATAAGXXXXXXAALSEEELPVGTEAEPTEPSNTTSGTPAPNVVVPVENGGSTTAAKGEGGAAESAEEGQGVSPEPLKETLKEGLGVPETAAAEARSDGSEDEEAEETDLDNDRPPTSTPDNRTPDERCMSSFPTRLRDLEIGWRLDALDGQGGWYAATVVEINPRAKALDRGGDKPSKASLSGKGEDQKRKTEYLVRVHFDAFTSRWDESYGEQEWREKKLQP 1561

[Close]

BLAST of jgi.p|Trimin1|349457 vs. uniprot
Match: F0YH03_AURAN (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YH03_AURAN)

HSP 1 Score: 256 bits (653), Expect = 1.270e-71
Identity = 147/339 (43.36%), Postives = 198/339 (58.41%), Query Frame = 0

Query:   20 GNSCYLNSALQCLSHTPMLRAYLLSSMARSEVNVSNPLGTQGQLVEELSALLQQLWSGDYLCVLPVKFKRSLARHKSQFAGTDQQDGQEFLAVILDALHERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDRQEXXXXXXXXXXXDVNRVLTKPYVPAPDDAVLATMAEPEKAADAWNRHVLRNRSVIVDLFQGQLKMECKCSECGKSSVSFDPFMFLSVPIPPRDDKFVAVLLVRRMRHRDSVEQYVPSS--PVRFGFTLPRLSQVGALLAALAEVAGLDSQALALADVFRGQCVKVYDAEASLAVIREEDFLVAYEKTWRAKETPAQPSKGGAPS 356
            GN+C++NSALQCLSHTP+LRAY+LS    +E+N +NPLG+QG++V+E + +L+ LWS  Y  V P KFKR+LAR K QFAG DQQD QEFL  +LD LHE                                               DVNRV+ KPYV  PDD  +A +     A DAW+R++LRNRSVIVDLFQGQLK E +C  CGK SV F+PFM LSVP+P   +K        R++H  S ++          FG ++PRL +VG L +AL+EV G+    +A+ DV+R +  ++ + +  LA +R++D +VAYEK+    E P   + G  PS
Sbjct:   92 GNTCFMNSALQCLSHTPLLRAYVLSEQFAAEINRANPLGSQGRMVDEFANVLRMLWSDRYRSVAPSKFKRALARAKPQFAGNDQQDSQEFLNEMLDVLHE-----------------------------------------------DVNRVVEKPYVEEPDDDDVAKLTYEVAARDAWDRYLLRNRSVIVDLFQGQLKSEKQCCACGKKSVKFEPFMHLSVPLPSTQEK--------RLKHAASKKRPGEKQLRAAIFGVSVPRLGEVGDLKSALSEVTGVPRADIAVGDVYRHRFARILEDDEPLAAVRDDDVVVAYEKS----EAPPSATAGKRPS 371

[Close]

BLAST of jgi.p|Trimin1|349457 vs. uniprot
Match: A0A7S3Y0Z1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0Z1_HETAK)

HSP 1 Score: 216 bits (549), Expect = 1.500e-62
Identity = 124/281 (44.13%), Postives = 164/281 (58.36%), Query Frame = 0

Query:   63 LVEELSALLQQLWSGDYLCVLPVKFKRSLARHKSQFAGTDQQDGQEFLAVILDALHERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDRQEXXXXXXXXXXXDVNRVLTKPYVPAPDDAVLATMAEPEKAADAWNRHVLRNRSVIVDLFQGQLKMECKCSECGKSSVSFDPFMFLSVPIPPRDDKFVAVLLVRRMRHRDSVEQYVPSSPVRFGFTLPRLSQVGALLAALAEVAGLDSQALALADVFRGQCVKVYDAEASLAVIREEDFLVAYEKTWRAK 343
            +VEE + LL QLWSGD+LCVLP +F R+LA+ K+QF G +QQD QEFLA +LDALHE                                               DVNRVL KP VPA +D  +   ++   +   W RH+LRNRSVIVDLFQGQLK+E  C  C K SV+FDPFM+LSVPIP + DK V V L+RR+R     E  +P+   R+G  LPRL ++  L  AL+ + G+  + L++ DV+R +  KV+     LA++RE+D LVAYE+T R +
Sbjct:    1 MVEEFAGLLAQLWSGDFLCVLPARFCRALAKCKTQFGGNEQQDAQEFLAEMLDALHE-----------------------------------------------DVNRVLRKPAVPALEDHEVEGKSDRALSRLFWERHLLRNRSVIVDLFQGQLKVEVTCPHCRKRSVNFDPFMYLSVPIPSQGDKAVEVTLIRRVRRGAPPEALMPT---RYGLLLPRLGEIADLKKALSALCGVPKEQLSITDVYRHKFHKVFSDSEPLALLREDDVLVAYERTRRRR 231

[Close]

BLAST of jgi.p|Trimin1|349457 vs. uniprot
Match: A0A7S3JRX2_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JRX2_9STRA)

HSP 1 Score: 223 bits (569), Expect = 1.290e-58
Identity = 144/393 (36.64%), Postives = 192/393 (48.85%), Query Frame = 0

Query:   20 GNSCYLNSALQCLSHTPMLRAYLLSSMARSEVNVSNPLGTQGQLVEELSALLQQLWSGDYLCVLPVKFKRSLARHKSQFAGTDQQDGQEFLAVILDALHERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDRQEXXXXXXXXXXXDVNRVLTKPYVPAPDDAVLATMAEPEKAADAWNRHVLRNRSVIVDLFQGQLKMECKCSECGKSSVSFDPFMFLSVPIPPRDDKFVAVLLVRRMR------HRDSVEQYVPSSP-------------------------------------------------------------------VRFGFTLPRLSQVGALLAALAEVAGLDSQALALADVFRGQCVKVYDAEASLAVIREEDFLVAYEKT 339
            GN+CY+NSALQCLSHTP+LRAY+LS     EVN +NPLGTQG++VEE +++L+QLWS  Y  + P KFKR+LA+ K QFAG DQ D QEFLA +LD LHE                                               DVNRV+ KPYV  PDD  +  +   + A +AW+R++LRNRSVIVDLFQGQL  E  C+ C K S+ F+ FM+LSVP+P   D+ V ++L+ R         R  V    P+S                                                                    V++ F +PRL  V  L  A+A+ +G+ +  L + DVFR + +K++     LA + +EDFLVAYE T
Sbjct:  825 GNTCYINSALQCLSHTPLLRAYILSEGYSGEVNRTNPLGTQGRMVEEFASILKQLWSEQYRYIAPNKFKRTLAKLKPQFAGNDQHDSQEFLAEMLDMLHE-----------------------------------------------DVNRVVEKPYVVEPDDDEVDKLTSIDAAREAWDRYLLRNRSVIVDLFQGQLMSERTCAVCSKRSLKFETFMYLSVPLPAPRDRLVKLVLLTRAEGSKLDLSRLEVPTNRPASTAISVDMPPDNGAISDKTTEINASKIEKRSSWSAMLSKPIEKNETSEEDKSIALNGALLQPKLVVPRVVKYVFEIPRLGTVAELKKAIAKRSGIAASDLVIGDVFRHRFIKLWHDTEPLARMADEDFLVAYEST 1170

[Close]

BLAST of jgi.p|Trimin1|349457 vs. uniprot
Match: A0A2G9RJ31_LITCT (Ubiquitinyl hydrolase 1 (Fragment) n=2 Tax=Lithobates catesbeianus TaxID=8400 RepID=A0A2G9RJ31_LITCT)

HSP 1 Score: 184 bits (466), Expect = 9.280e-48
Identity = 108/323 (33.44%), Postives = 163/323 (50.46%), Query Frame = 0

Query:   20 GNSCYLNSALQCLSHTPMLRAYLLSSMARSEVNVSNPLGTQGQLVEELSALLQQLWSGDYLCVLPVKFKRSLARHKSQFAGTDQQDGQEFLAVILDALHERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDRQEXXXXXXXXXXXDVNRVLTKPYVPAPD-----DAVLATMAEPEKAADAWNRHVLRNRSVIVDLFQGQLKMECKCSECGKSSVSFDPFMFLSVPIPPRDDKFVAVLLVRRMRHRDSVEQYVPSSPVRFGFTLPRLSQVGALLAALAEVAGLDSQALALADVFRGQCVKVYDAEASLAVIREEDFLVAYE 337
            GN+C++NSALQCLS+TP L  Y L+   + E+N  NPLG +G++    + L++Q+WSG++  V P  FK  + R   QF+G  QQD QE LA +LD LHE                                               D+NRV  KPY+   D     D+V+A         +AW+ H+ RN S+IVD+F G  K    C EC K SV+FDPF +L++P+P R D+ + V LVR   H           P ++   +P++  V  L AAL++++ + ++ + + DV+  +  K++  +  L+ I E D L  YE
Sbjct:  108 GNTCFMNSALQCLSNTPPLTEYFLTDDYKEEINKENPLGMKGEIAMAYAELIRQIWSGEHSYVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHE-----------------------------------------------DLNRVKKKPYLELKDADGRPDSVVAK--------EAWDNHLRRNNSIIVDIFHGLFKSTLVCPECAKVSVTFDPFCYLTLPLPMRKDRTMEVFLVRSDPH---------CKPTQYRLVVPKMGTVSDLCAALSKLSDVPAENMVVTDVYNHRFHKIFQVDEMLSHIMERDDLFVYE 366

[Close]

BLAST of jgi.p|Trimin1|349457 vs. uniprot
Match: A0A0D2WIT0_CAPO3 (USP domain-containing protein n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WIT0_CAPO3)

HSP 1 Score: 189 bits (481), Expect = 2.270e-47
Identity = 111/318 (34.91%), Postives = 164/318 (51.57%), Query Frame = 0

Query:   20 GNSCYLNSALQCLSHTPMLRAYLLSSMARSEVNVSNPLGTQGQLVEELSALLQQLWSGDYLCVLPVKFKRSLARHKSQFAGTDQQDGQEFLAVILDALHERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDRQEXXXXXXXXXXXDVNRVLTKPYVPAPDDAVLATMAEPEKAADAWNRHVLRNRSVIVDLFQGQLKMECKCSECGKSSVSFDPFMFLSVPIPPRDDKFVAVLLVRRMRHRDSVEQYVPSSPVRFGFTLPRLSQVGALLAALAEVAGLDSQALALADVFRGQCVKVYDAEASLAVIREEDFLVAYE 337
            GN+C++NS LQCLS+   L +Y +S+     +N  NPLG +G++ +E  AL+++LWSG + CV P  FK++L    +QFAG  QQD QEFLA +LD LHE                                               D+NRVL KPYV   +      + E   A +AW RH+LRN+SV+VDLFQGQ K    C+ C K S++FDPFM++SVP+P  +++ +    V R       +  +P   VR   T+P+ + +  L A + E+  + S +L + D F+    +V   +  +  I E D +V YE
Sbjct:  470 GNTCFMNSGLQCLSNIAPLTSYFVSNAFVDHINRDNPLGLKGKMADEYGALIRELWSGKFDCVAPNSFKKALGSFATQFAGYSQQDSQEFLAFLLDGLHE-----------------------------------------------DLNRVLKKPYVEKVESTSTDNLEE--VAQEAWRRHLLRNQSVVVDLFQGQFKSTVICTTCNKVSITFDPFMYVSVPVPVSNERVIVTHFVPR-------DTQLPV--VRMNVTVPKTANLPILRAKMGEMLKVPSSSLVVVDHFKSYVFRVLADDMDVREISESDEIVVYE 729

[Close]

BLAST of jgi.p|Trimin1|349457 vs. uniprot
Match: A0A8C4XDV7_ERPCA (Ubiquitinyl hydrolase 1 n=2 Tax=Polypteridae TaxID=8289 RepID=A0A8C4XDV7_ERPCA)

HSP 1 Score: 189 bits (479), Expect = 3.890e-47
Identity = 111/320 (34.69%), Postives = 165/320 (51.56%), Query Frame = 0

Query:   20 GNSCYLNSALQCLSHTPMLRAYLLSSMARSEVNVSNPLGTQGQLVEELSALLQQLWSGDYLCVLPVKFKRSLARHKSQFAGTDQQDGQEFLAVILDALHERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDRQEXXXXXXXXXXXDVNRVLTKPYVPAPDDAVLATMAEPEK--AADAWNRHVLRNRSVIVDLFQGQLKMECKCSECGKSSVSFDPFMFLSVPIPPRDDKFVAVLLVRRMRHRDSVEQYVPSSPVRFGFTLPRLSQVGALLAALAEVAGLDSQALALADVFRGQCVKVYDAEASLAVIREEDFLVAYE 337
            GN+C++NSALQCLS+ P L  Y L     +E+N  NPLG +G++ E  + L++Q+WSG +  V P  FK  + R   QF+G  QQD QE LA +LD LHE                                               D+NRV  KPY+   D         P++  A +AW  H LRN S+IVD+F G  K    C EC K SV+FDPF +L++P+P + D+ + V LVR     D +     S P+++   +P+L  V  L +ALA+++G+ ++ + +ADV+  +C K+Y ++  L  I + D +  YE
Sbjct:  326 GNTCFMNSALQCLSNAPPLTEYFLEDKYEAEINRENPLGMRGEIAEAYADLVKQMWSGRHSYVAPKTFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHE-----------------------------------------------DLNRVKKKPYLALKD-----AEGRPDEIVAKEAWTNHRLRNNSIIVDIFHGLFKSTLVCPECSKVSVTFDPFCYLTLPLPMKKDRTMEVFLVRT----DPL-----SRPMQYRVVVPKLGSVADLCSALAKLSGVSAENMVVADVYNHRCHKIYRSDEGLNHIMDRDDIFVYE 584

[Close]

BLAST of jgi.p|Trimin1|349457 vs. uniprot
Match: UPI000854F5AC (LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 4-like n=1 Tax=Nanorana parkeri TaxID=125878 RepID=UPI000854F5AC)

HSP 1 Score: 177 bits (449), Expect = 9.940e-46
Identity = 108/319 (33.86%), Postives = 162/319 (50.78%), Query Frame = 0

Query:   20 GNSCYLNSALQCLSHTPMLRAYLLSSMARSEVNVSNPLGTQGQLVEELSALLQQLWSGDYLCVLPVKFKRSLARHKSQFAGTDQQDGQEFLAVILDALHERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDRQEXXXXXXXXXXXDVNRVLTKPYVPAPD-----DAVLATMAEPEKAADAWNRHVLRNRSVIVDLFQGQLKMECKCSECGKSSVSFDPFMFLSVPIPPRDDKFVAVLLVRRMRHRDSVEQYVPSSPVRFGFTLPRLSQVGALLAALAEVAGLDSQALALADVFRGQCVKVYDAEASLAVIREEDFL 333
            GN+C++NSALQCLS+TP L  Y LS   + E+N  NPLG +G++    + L++Q+WSG++  V P  FK  + R   QF+G  QQD QE LA +LD LHE                                               D+NRV  KPY+   D     D+V+A         +AW+ H+ RN S+IVD+F G  K    C EC K SV+FDPF +L++P+P R D+ + V LVR      S  Q     P ++   +P++  V  L AAL++++ + ++ + + DV+  +  K++  +  L+ I E D L
Sbjct:   27 GNTCFMNSALQCLSNTPPLTEYFLSDDYKEEINKENPLGMKGEIAMAYAELIRQIWSGEHSYVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHE-----------------------------------------------DLNRVKKKPYLELKDADGRPDSVVAK--------EAWDNHLRRNYSIIVDIFHGLFKSTLVCPECAKVSVTFDPFCYLTLPLPMRKDRTMEVFLVR------SDPQ---CKPTQYRLVVPKMGAVSDLCAALSKLSDVPAENMVVTDVYNHRFHKIFQVDEMLSHIMERDDL 281

[Close]

BLAST of jgi.p|Trimin1|349457 vs. uniprot
Match: UPI00109BF127 (ubiquitin carboxyl-terminal hydrolase 4 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BF127)

HSP 1 Score: 183 bits (464), Expect = 1.500e-45
Identity = 112/321 (34.89%), Postives = 160/321 (49.84%), Query Frame = 0

Query:   20 GNSCYLNSALQCLSHTPMLRAYLLSSMARSEVNVSNPLGTQGQLVEELSALLQQLWSGDYLCVLPVKFKRSLARHKSQFAGTDQQDGQEFLAVILDALHERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDRQEXXXXXXXXXXXDVNRVLTKPYVPAPDDAVLATMAEPEK--AADAWNRHVLRNRSVIVDLFQGQLKMECKCSECGKSSVSFDPFMFLSVPIPPRDDKFVAVLLVRRMRHRDSVEQYVPSSPVRFGFTLPRLSQVGALLAALA-EVAGLDSQALALADVFRGQCVKVYDAEASLAVIREEDFLVAYE 337
            GN+C++NS LQCLS+T  L  Y LS   ++E+N  NPLG +G++ +  + LL QLWSG Y  V P  FK  + R   QF+G  QQD  E LA +LD LHE                                               D+NR+  KPY+   D         P++  A +AW  H+ RN S+IVD+F GQ K    C EC K SV+FDPF +LS+P+P + ++++ VLL+R     D +E+     P  F  ++P++  +  L+ AL  E A L    L + DV+  +  KV+ +  SL  I E D +  YE
Sbjct:  298 GNTCFMNSGLQCLSNTMRLTKYFLSDQYKAELNFDNPLGMRGEIAKAFADLLSQLWSGQYSSVAPRSFKMQVGRFAPQFSGYQQQDSHELLAFLLDGLHE-----------------------------------------------DLNRIKKKPYIEVED-----ANGRPDEVVAQEAWESHLQRNDSIIVDIFHGQFKSTLVCPECEKVSVTFDPFCYLSLPLPVKKERYLEVLLIRD----DPMER-----PTEFKVSVPKMGTISDLVNALCKEDASLQKDRLIVCDVYNHRLHKVFKSRDSLTQILERDDIFVYE 557

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|349457 vs. uniprot

BLAST of jgi.p|Trimin1|349457 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836CCM1_9STRA	0.000e+0	100.00	USP domain-containing protein (Fragment) n=1 Tax=T...	[more]
D7FKW9_ECTSI	4.050e-78	34.83	Similar to Ubiquitin carboxyl-terminal hydrolase 1...	[more]
F0YH03_AURAN	1.270e-71	43.36	Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Aure...	[more]
A0A7S3Y0Z1_HETAK	1.500e-62	44.13	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
A0A7S3JRX2_9STRA	1.290e-58	36.64	Hypothetical protein n=2 Tax=Aureoumbra lagunensis...	[more]
A0A2G9RJ31_LITCT	9.280e-48	33.44	Ubiquitinyl hydrolase 1 (Fragment) n=2 Tax=Lithoba...	[more]
A0A0D2WIT0_CAPO3	2.270e-47	34.91	USP domain-containing protein n=2 Tax=Capsaspora o...	[more]
A0A8C4XDV7_ERPCA	3.890e-47	34.69	Ubiquitinyl hydrolase 1 n=2 Tax=Polypteridae TaxID...	[more]
UPI000854F5AC	9.940e-46	33.86	LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal h...	[more]
UPI00109BF127	1.500e-45	34.89	ubiquitin carboxyl-terminal hydrolase 4 n=1 Tax=Ex...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.90.70.10	Cysteine proteinases	coord: 145..272 e-value: 4.8E-22 score: 80.4 coord: 18..123 e-value: 4.2E-30 score: 106.8
None	No IPR available	GENE3D	2.30.30.140		coord: 474..569 e-value: 1.5E-9 score: 39.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 444..469
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 389..419
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 447..468
None	No IPR available	PANTHER	PTHR21646	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE	coord: 19..119
None	No IPR available	PANTHER	PTHR21646:SF70	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE	coord: 19..119
None	No IPR available	PANTHER	PTHR21646	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE	coord: 151..358
None	No IPR available	PANTHER	PTHR21646:SF70	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE	coord: 151..358
IPR001394	Peptidase C19, ubiquitin carboxyl-terminal hydrolase	PFAM	PF00443	UCH	coord: 150..262 e-value: 1.9E-14 score: 53.9
IPR001394	Peptidase C19, ubiquitin carboxyl-terminal hydrolase	PFAM	PF00443	UCH	coord: 19..119 e-value: 5.6E-24 score: 85.1
IPR028889	Ubiquitin specific protease domain	PROSITE	PS50235	USP_3	coord: 13..244 score: 20.748062
IPR038765	Papain-like cysteine peptidase superfamily	SUPERFAMILY	54001	Cysteine proteinases	coord: 19..245
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 491..541

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_43	contig	Contig_43:626081..640350 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|349457	mRNA_13758	Tribonema minus UTEX_B_3156	mRNA	Contig_43 626081..640351 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|349457|estExt_Genemark1.C_Ctg_430048 ID=Trimin1|349457|estExt_Genemark1.C_Ctg_430048|Name=jgi.p|Trimin1|349457|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=612bp
MLLLLLLLLLLLLLLPLLQGNSCYLNSALQCLSHTPMLRAYLLSSMARSE
VNVSNPLGTQGQLVEELSALLQQLWSGDYLCVLPVKFKRSLARHKSQFAG
TDQQDGQEFLAVILDALHERDRQEFLAVILDALHERDGPGFLAVILDALH
EDRQEFLAVILDALHEDVNRVLTKPYVPAPDDAVLATMAEPEKAADAWNR
HVLRNRSVIVDLFQGQLKMECKCSECGKSSVSFDPFMFLSVPIPPRDDKF
VAVLLVRRMRHRDSVEQYVPSSPVRFGFTLPRLSQVGALLAALAEVAGLD
SQALALADVFRGQCVKVYDAEASLAVIREEDFLVAYEKTWRAKETPAQPS
KGGAPSPPSGLLPLKLQALPLPWCSVAAVGAAAAQSAGGAPSPSGLPPLK
PQASPLPPQLLAGSRGASSTLKASSPVGKSLFLQSASGSDYASSHGSFTD
VEDETEANEAEAARGLAEDAEAAEAATAAQAAAAWPTSFAGIRAGLRLDA
LDSRGTWYSGTVAELDGVGEARRARVHFDDFDARWDEGFDAAAWGEGKLA
PWDEWFDAAAWGEGKLAPLFSKSAAVARGPHGWVTAINLRHAAPPAPSIA
QAGRPPAAASGL

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001394	Peptidase_C19_UCH
IPR028889	USP_dom
IPR038765	Papain-like_cys_pep_sf
IPR016197	Chromo-like_dom_sf