Trimin1|166369|e_gw1.43.21.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|166369
Unique NameTrimin1|166369|e_gw1.43.21.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length119
Homology
BLAST of jgi.p|Trimin1|166369 vs. uniprot
Match: A0A835YSB9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSB9_9STRA)

HSP 1 Score: 250 bits (639), Expect = 1.920e-84
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0
Query:    1 VHTRRSSEEDRIVRQLVARHGTGSTCWMLLNKKGLPQRTPKQIRERWLNHLVPHINKDPWTQEEDMVLCAAHRHFGGIYAEFARLLLPGRPENSIKNHLNTSKMLASDPAHFGLEVRA 118
            VHTRRSSEEDRIVRQLVARHGTGSTCWMLLNKKGLPQRTPKQIRERWLNHLVPHINKDPWTQEEDMVLCAAHRHFGGIYAEFARLLLPGRPENSIKNHLNTSKMLASDPAHFGLEVRA
Sbjct:    1 VHTRRSSEEDRIVRQLVARHGTGSTCWMLLNKKGLPQRTPKQIRERWLNHLVPHINKDPWTQEEDMVLCAAHRHFGGIYAEFARLLLPGRPENSIKNHLNTSKMLASDPAHFGLEVRA 118          
BLAST of jgi.p|Trimin1|166369 vs. uniprot
Match: A0A835YTC6_9STRA (Homeodomain-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTC6_9STRA)

HSP 1 Score: 201 bits (511), Expect = 3.850e-64
Identity = 95/112 (84.82%), Postives = 101/112 (90.18%), Query Frame = 0
Query:    6 SSEEDRIVRQLVARHGTGSTCWMLLNKKGLPQRTPKQIRERWLNHLVPHINKDPWTQEEDMVLCAAHRHFGGIYAEFARLLLPGRPENSIKNHLNTSKMLASDPAHFGLEVR 117
            SSEEDRIVR+LVARHG+G TCWML+NKKGLPQRT KQIRERWLNHL P INKDPWTQEED+VLCAAHRHFGG YAEFARLLLPGRPEN+IKN LN  K+LASDP H  LEVR
Sbjct:   63 SSEEDRIVRELVARHGSGGTCWMLMNKKGLPQRTAKQIRERWLNHLAPDINKDPWTQEEDLVLCAAHRHFGGSYAEFARLLLPGRPENNIKNRLN--KLLASDPVHCWLEVR 172          
BLAST of jgi.p|Trimin1|166369 vs. uniprot
Match: A0A835YZH3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZH3_9STRA)

HSP 1 Score: 137 bits (344), Expect = 2.340e-39
Identity = 68/110 (61.82%), Postives = 84/110 (76.36%), Query Frame = 0
Query:    8 EEDRIVRQLVARHGTGSTCWMLLNKKGLPQRTPKQIRERWLNHLVPHINKDPWTQEEDMVLCAAHRHFGGIYAEFARLLLPGRPENSIKNHLNTSKMLASDPAHFGLEVR 117
            +ED IVR LVARHGT    W L+   GLPQRT KQIRERW NHL P+I KD WT++ED+VLCAA+R FGG +AEFARLLL GRPEN+IKNHL    ++ + P++  ++VR
Sbjct:    3 QEDAIVRVLVARHGTRD--WALMRDVGLPQRTAKQIRERWTNHLTPNIKKDGWTKQEDIVLCAAYRLFGGSFAEFARLLLAGRPENTIKNHL--MHLVITKPSYCWVQVR 108          
BLAST of jgi.p|Trimin1|166369 vs. uniprot
Match: A0A078K1D9_BRANA ((rape) hypothetical protein (Fragment) n=1 Tax=Brassica napus TaxID=3708 RepID=A0A078K1D9_BRANA)

HSP 1 Score: 92.8 bits (229), Expect = 6.200e-22
Identity = 50/89 (56.18%), Postives = 58/89 (65.17%), Query Frame = 0
Query:   15 QLVARHGTGSTCWMLLNKKGLPQRTPKQIRERWLNHLVPHINKDPWTQEEDMVLCAAHRHFGGIYAEFARLLLPGRPENSIKNHLNTSK 103
            QLV  HGT    W  + K  LP R  KQ RERW NHL P I KD W++EEDM+L AAH+  G  +AE AR L PGR EN+IKNH N +K
Sbjct:   18 QLVEHHGTKK--WSHIAKM-LPGRVGKQCRERWHNHLRPDIKKDGWSEEEDMILIAAHKEIGNKWAEIARKL-PGRTENTIKNHWNATK 102          
BLAST of jgi.p|Trimin1|166369 vs. uniprot
Match: A0A5B6UYY7_9ROSI (Myb-like protein Q n=1 Tax=Gossypium australe TaxID=47621 RepID=A0A5B6UYY7_9ROSI)

HSP 1 Score: 99.0 bits (245), Expect = 7.900e-22
Identity = 53/96 (55.21%), Postives = 64/96 (66.67%), Query Frame = 0
Query:    8 EEDRIVRQLVARHGTGSTCWMLLNKKGLPQRTPKQIRERWLNHLVPHINKDPWTQEEDMVLCAAHRHFGGIYAEFARLLLPGRPENSIKNHLNTSK 103
            +EDR++ QLV RHGT    W  + K  L  R  KQ RERW NHL P I KD W++EEDMVL AAH+  G  +AE A+ L PGR EN+IKNH N +K
Sbjct:  212 QEDRVLMQLVTRHGTKK--WSQIAKM-LNGRVGKQCRERWHNHLRPDIKKDSWSEEEDMVLIAAHKEIGNKWAEIAKRL-PGRTENTIKNHWNATK 303          
BLAST of jgi.p|Trimin1|166369 vs. uniprot
Match: A0A6D2KES0_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2KES0_9BRAS)

HSP 1 Score: 97.1 bits (240), Expect = 9.990e-22
Identity = 53/98 (54.08%), Postives = 64/98 (65.31%), Query Frame = 0
Query:    6 SSEEDRIVRQLVARHGTGSTCWMLLNKKGLPQRTPKQIRERWLNHLVPHINKDPWTQEEDMVLCAAHRHFGGIYAEFARLLLPGRPENSIKNHLNTSK 103
            +SEEDR++ QLV RHGT    W  + K  L  R  KQ RERW NHL P I KD W++EED +L  AH+  G  +AE AR L PGR EN+IKNH N +K
Sbjct:  111 TSEEDRLLVQLVDRHGTKK--WSQIAKM-LQGRVGKQCRERWHNHLRPDIKKDSWSEEEDRILIEAHKEIGNKWAEIARKL-PGRTENTIKNHWNATK 204          
BLAST of jgi.p|Trimin1|166369 vs. uniprot
Match: A0A7S0JKB2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JKB2_9EUKA)

HSP 1 Score: 91.7 bits (226), Expect = 1.140e-21
Identity = 51/97 (52.58%), Postives = 63/97 (64.95%), Query Frame = 0
Query:    6 SSEEDRIVRQLVARHGTGSTCWMLLNKKGLPQRTPKQIRERWLNHLVPHINKDPWTQEEDMVLCAAHRHFGGIYAEFARLLLPGRPENSIKNHLNTS 102
            S+EED ++R LV  HG     W  +  K L  R  KQ RERW NHL P I KD W++EED V+ AAHR  G  +AE A+LL PGR +N+IKNH N+S
Sbjct:    1 SNEEDALLRTLVLEHGAKK--WSTIAAK-LHGRIGKQCRERWHNHLNPDICKDAWSKEEDDVIMAAHRQIGNKWAEIAKLL-PGRTDNAIKNHWNSS 93          
BLAST of jgi.p|Trimin1|166369 vs. uniprot
Match: A0A8E9ZRH0_ISATI (Myeloblastosis transcription factor 118 n=1 Tax=Isatis tinctoria TaxID=161756 RepID=A0A8E9ZRH0_ISATI)

HSP 1 Score: 98.2 bits (243), Expect = 1.190e-21
Identity = 53/98 (54.08%), Postives = 65/98 (66.33%), Query Frame = 0
Query:    6 SSEEDRIVRQLVARHGTGSTCWMLLNKKGLPQRTPKQIRERWLNHLVPHINKDPWTQEEDMVLCAAHRHFGGIYAEFARLLLPGRPENSIKNHLNTSK 103
            +S+EDR++ QLV RHGT    W  + K  L  R  KQ RERW NHL P I KD W++EEDM+L  AH+  G  +AE AR L PGR EN+IKNH N +K
Sbjct:  195 TSDEDRLLVQLVERHGTKK--WSQIAKM-LQGRVGKQCRERWHNHLRPDIKKDGWSEEEDMILIEAHKEIGNRWAEIARKL-PGRTENTIKNHWNATK 288          
BLAST of jgi.p|Trimin1|166369 vs. uniprot
Match: A0A6S7LCP3_LACSI (Uncharacterized protein n=2 Tax=Lactuca TaxID=4235 RepID=A0A6S7LCP3_LACSI)

HSP 1 Score: 95.9 bits (237), Expect = 1.480e-21
Identity = 50/98 (51.02%), Postives = 66/98 (67.35%), Query Frame = 0
Query:    6 SSEEDRIVRQLVARHGTGSTCWMLLNKKGLPQRTPKQIRERWLNHLVPHINKDPWTQEEDMVLCAAHRHFGGIYAEFARLLLPGRPENSIKNHLNTSK 103
            +S+EDR++ QLV +HG   T W  + +K LP R  KQ R+RW NHL P I KD W++EED +L A H+  G  ++E AR L PGR EN+IKNH N +K
Sbjct:   68 NSDEDRLLVQLVTQHG--DTKWSKIAEK-LPGRIAKQCRDRWQNHLRPDITKDAWSEEEDKLLIAIHKEVGNKWSEIARRL-PGRSENTIKNHWNATK 161          
BLAST of jgi.p|Trimin1|166369 vs. uniprot
Match: A0A1U8LH93_GOSHI (myb-like protein AA n=19 Tax=Gossypium TaxID=3633 RepID=A0A1U8LH93_GOSHI)

HSP 1 Score: 98.2 bits (243), Expect = 1.510e-21
Identity = 52/96 (54.17%), Postives = 64/96 (66.67%), Query Frame = 0
Query:    8 EEDRIVRQLVARHGTGSTCWMLLNKKGLPQRTPKQIRERWLNHLVPHINKDPWTQEEDMVLCAAHRHFGGIYAEFARLLLPGRPENSIKNHLNTSK 103
            +EDR++ QLV RHGT    W  + K  L  R  KQ RERW NHL P I KD W++EEDM+L AAH+  G  +AE A+ L PGR EN+IKNH N +K
Sbjct:  260 QEDRVLMQLVTRHGTKK--WSEIAKM-LNGRVGKQCRERWHNHLRPDIKKDSWSEEEDMILIAAHKEIGNKWAEIAKRL-PGRTENTIKNHWNATK 351          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|166369 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YSB9_9STRA1.920e-84100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YTC6_9STRA3.850e-6484.82Homeodomain-like protein n=1 Tax=Tribonema minus T... [more]
A0A835YZH3_9STRA2.340e-3961.82Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A078K1D9_BRANA6.200e-2256.18(rape) hypothetical protein (Fragment) n=1 Tax=Bra... [more]
A0A5B6UYY7_9ROSI7.900e-2255.21Myb-like protein Q n=1 Tax=Gossypium australe TaxI... [more]
A0A6D2KES0_9BRAS9.990e-2254.08Uncharacterized protein n=1 Tax=Microthlaspi errat... [more]
A0A7S0JKB2_9EUKA1.140e-2152.58Hypothetical protein (Fragment) n=1 Tax=Calcidiscu... [more]
A0A8E9ZRH0_ISATI1.190e-2154.08Myeloblastosis transcription factor 118 n=1 Tax=Is... [more]
A0A6S7LCP3_LACSI1.480e-2151.02Uncharacterized protein n=2 Tax=Lactuca TaxID=4235... [more]
A0A1U8LH93_GOSHI1.510e-2154.17myb-like protein AA n=19 Tax=Gossypium TaxID=3633 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 56..105
e-value: 2.7E-4
score: 30.3
coord: 1..53
e-value: 2.4
score: 14.9
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 6..51
score: 7.735266
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 52..103
score: 6.144367
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 59..103
e-value: 4.57317E-4
score: 33.703
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 6..51
e-value: 7.56296E-7
score: 41.0218
NoneNo IPR availableGENE3D1.10.10.60coord: 58..112
e-value: 7.1E-9
score: 37.6
NoneNo IPR availableGENE3D1.10.10.60coord: 6..56
e-value: 1.2E-12
score: 49.6
NoneNo IPR availablePFAMPF13921Myb_DNA-bind_6coord: 7..66
e-value: 7.7E-13
score: 48.5
NoneNo IPR availablePANTHERPTHR45614MYB PROTEIN-RELATEDcoord: 6..103
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 1..55
score: 15.223094
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 6..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_43contigContig_43:686823..689940 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|166369mRNA_13763Tribonema minus UTEX_B_3156 mRNAContig_43 686823..689940 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|166369|e_gw1.43.21.1 ID=Trimin1|166369|e_gw1.43.21.1|Name=jgi.p|Trimin1|166369|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=119bp
VHTRRSSEEDRIVRQLVARHGTGSTCWMLLNKKGLPQRTPKQIRERWLNH
LVPHINKDPWTQEEDMVLCAAHRHFGGIYAEFARLLLPGRPENSIKNHLN
TSKMLASDPAHFGLEVRA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR009057Homeobox-like_sf