Trimin1|166335|e_gw1.43.45.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|166335
Unique NameTrimin1|166335|e_gw1.43.45.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length115
Homology
BLAST of jgi.p|Trimin1|166335 vs. uniprot
Match: A0A835YSP3_9STRA (PNPLA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSP3_9STRA)

HSP 1 Score: 236 bits (602), Expect = 6.300e-79
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0
Query:    1 MHCQITLISPFTSAPPPPPLSQQIWECVRATTAAPTYFKPLQKGAMLFGDGALLANNPTAVALAEARLIYPGVPVEAVVSIGEFRQCGPELALRRHCLQVFAGFKVPQNYMHLL 114
            MHCQITLISPFTSAPPPPPLSQQIWECVRATTAAPTYFKPLQKGAMLFGDGALLANNPTAVALAEARLIYPGVPVEAVVSIGEFRQCGPELALRRHCLQVFAGFKVPQNYMHLL
Sbjct:    1 MHCQITLISPFTSAPPPPPLSQQIWECVRATTAAPTYFKPLQKGAMLFGDGALLANNPTAVALAEARLIYPGVPVEAVVSIGEFRQCGPELALRRHCLQVFAGFKVPQNYMHLL 114          
BLAST of jgi.p|Trimin1|166335 vs. uniprot
Match: A0A4D9CW07_9STRA (PNPLA domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CW07_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 4.950e-18
Identity = 40/60 (66.67%), Postives = 51/60 (85.00%), Query Frame = 0
Query:   23 QIWECVRATTAAPTYFKPLQKGAMLFGDGALLANNPTAVALAEARLIYPGVPVEAVVSIG 82
            ++ E +RATTAAPTYF PL +G M+  DGALLANNPTA+A+ EA++IYP VP+EAVVS+G
Sbjct:  367 KVREAIRATTAAPTYFYPLVRGGMVHSDGALLANNPTAIAIHEAKIIYPNVPIEAVVSVG 426          
BLAST of jgi.p|Trimin1|166335 vs. uniprot
Match: K8Z805_NANGC (Calcium-independent phospholipase a2-gamma n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8Z805_NANGC)

HSP 1 Score: 88.2 bits (217), Expect = 5.410e-18
Identity = 40/60 (66.67%), Postives = 51/60 (85.00%), Query Frame = 0
Query:   23 QIWECVRATTAAPTYFKPLQKGAMLFGDGALLANNPTAVALAEARLIYPGVPVEAVVSIG 82
            ++ E +RATTAAPTYF PL +G M+  DGALLANNPTA+A+ EA++IYP VP+EAVVS+G
Sbjct:  737 KVREAIRATTAAPTYFYPLVRGGMVHSDGALLANNPTAIAIHEAKIIYPNVPIEAVVSVG 796          
BLAST of jgi.p|Trimin1|166335 vs. uniprot
Match: D8LL86_ECTSI (Similar to Calcium-independent phospholipase A2-gamma, C terminal part n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL86_ECTSI)

HSP 1 Score: 85.5 bits (210), Expect = 2.570e-17
Identity = 37/57 (64.91%), Postives = 48/57 (84.21%), Query Frame = 0
Query:   26 ECVRATTAAPTYFKPLQKGAMLFGDGALLANNPTAVALAEARLIYPGVPVEAVVSIG 82
            ECVRATTAAP++F PL  G M++ DGA LANNPT++AL EA+L+YP VP+E V+S+G
Sbjct:  176 ECVRATTAAPSFFTPLVDGKMMYADGAFLANNPTSIALTEAKLLYPNVPIECVLSVG 232          
BLAST of jgi.p|Trimin1|166335 vs. uniprot
Match: A0A5J4Z6W4_PORPP (Calcium-independent phospholipase A2-gamma n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z6W4_PORPP)

HSP 1 Score: 85.5 bits (210), Expect = 4.650e-17
Identity = 40/64 (62.50%), Postives = 49/64 (76.56%), Query Frame = 0
Query:   23 QIWECVRATTAAPTYFKPLQKGAMLFGDGALLANNPTAVALAEARLIYPGVPVEAVVSIGEFRQ 86
            ++WE  RATTAAP YF PLQ G  LF DGALL NNPTA+A+ EAR+++P  P+E VVS+G  RQ
Sbjct:  507 RLWEAARATTAAPAYFDPLQSGDELFCDGALLVNNPTAIAVHEARMLFPDRPLEIVVSVGSGRQ 570          
BLAST of jgi.p|Trimin1|166335 vs. uniprot
Match: A0A6H5KSL4_9PHAE (PNPLA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSL4_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 6.640e-17
Identity = 37/57 (64.91%), Postives = 48/57 (84.21%), Query Frame = 0
Query:   26 ECVRATTAAPTYFKPLQKGAMLFGDGALLANNPTAVALAEARLIYPGVPVEAVVSIG 82
            ECVRATTAAP++F PL  G M++ DGA LANNPT++AL EA+L+YP VP+E V+S+G
Sbjct: 1409 ECVRATTAAPSFFTPLVDGNMMYADGAFLANNPTSIALTEAKLLYPNVPIECVLSVG 1465          
BLAST of jgi.p|Trimin1|166335 vs. uniprot
Match: A0A835YX58_9STRA (Calcium-independent phospholipase-like protein A2-gamma, C terminal part n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX58_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 9.820e-16
Identity = 40/57 (70.18%), Postives = 46/57 (80.70%), Query Frame = 0
Query:   26 ECVRATTAAPTYFKPLQKGAMLFGDGALLANNPTAVALAEARLIYPGVPVEAVVSIG 82
            E +RATTAAPT+F PL     L+ DGAL+ANNPTAVAL EA+ IYPGVPVE VVS+G
Sbjct:  176 ESLRATTAAPTFFSPLLINGTLYSDGALMANNPTAVALHEAKHIYPGVPVELVVSLG 232          
BLAST of jgi.p|Trimin1|166335 vs. uniprot
Match: A0A8J5XN29_DIALT (PNPLA domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XN29_DIALT)

HSP 1 Score: 80.9 bits (198), Expect = 2.040e-15
Identity = 43/101 (42.57%), Postives = 61/101 (60.40%), Query Frame = 0
Query:    4 QITLISPFTSAPPPPPL-------------------SQQIWECVRATTAAPTYFKPLQKGAMLFGDGALLANNPTAVALAEARLIYPGVPVEAVVSIGEFR 85
            ++ L+S  TS  PP P                    S + WE VRA+TAAPTYF+PL +  ++F DG LL+NNPT++A+ EAR ++P  P++A+VSIG  R
Sbjct: 1432 KVFLVSALTSTKPPLPYLFRTYQHDARTPSRFPGDCSTRAWEAVRASTAAPTYFEPLLRDKLMFQDGGLLSNNPTSLAIHEARCLWPDRPIDAIVSIGTGR 1532          
BLAST of jgi.p|Trimin1|166335 vs. uniprot
Match: A0A4D9DA09_9STRA (PNPLA domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DA09_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 3.730e-15
Identity = 42/64 (65.62%), Postives = 47/64 (73.44%), Query Frame = 0
Query:   19 PLSQQIWECVRATTAAPTYFKPLQKGAMLFGDGALLANNPTAVALAEARLIYPGVPVEAVVSIG 82
            P S  IW   RATTAAPT+F PL++    + DGA LANNPTAVAL E R +YPGVPVE VVSIG
Sbjct: 1081 PASLYIW---RATTAAPTFFSPLEREDAKYCDGAFLANNPTAVALNEVRTLYPGVPVECVVSIG 1141          
BLAST of jgi.p|Trimin1|166335 vs. uniprot
Match: A0A6P8Z8L1_THRPL (calcium-independent phospholipase A2-gamma-like n=1 Tax=Thrips palmi TaxID=161013 RepID=A0A6P8Z8L1_THRPL)

HSP 1 Score: 79.7 bits (195), Expect = 4.840e-15
Identity = 37/65 (56.92%), Postives = 49/65 (75.38%), Query Frame = 0
Query:   25 WECVRATTAAPTYFKPLQKGAMLFGDGALLANNPTAVALAEARLIYPGVPVEAVVSIGEFRQCGP 89
            WE VRA+++APTYF+  Q G +L  DG ++ NNPTAVA+ EARL++PGVP++ VVS G  R C P
Sbjct:  443 WEAVRASSSAPTYFEEFQLGDLLHQDGGIMVNNPTAVAIHEARLLWPGVPIQCVVSFGTGR-CNP 506          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|166335 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YSP3_9STRA6.300e-79100.00PNPLA domain-containing protein n=1 Tax=Tribonema ... [more]
A0A4D9CW07_9STRA4.950e-1866.67PNPLA domain-containing protein n=1 Tax=Nannochlor... [more]
K8Z805_NANGC5.410e-1866.67Calcium-independent phospholipase a2-gamma n=2 Tax... [more]
D8LL86_ECTSI2.570e-1764.91Similar to Calcium-independent phospholipase A2-ga... [more]
A0A5J4Z6W4_PORPP4.650e-1762.50Calcium-independent phospholipase A2-gamma n=1 Tax... [more]
A0A6H5KSL4_9PHAE6.640e-1764.91PNPLA domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A835YX58_9STRA9.820e-1670.18Calcium-independent phospholipase-like protein A2-... [more]
A0A8J5XN29_DIALT2.040e-1542.57PNPLA domain-containing protein n=1 Tax=Diacronema... [more]
A0A4D9DA09_9STRA3.730e-1565.63PNPLA domain-containing protein n=2 Tax=Monodopsid... [more]
A0A6P8Z8L1_THRPL4.840e-1556.92calcium-independent phospholipase A2-gamma-like n=... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002641Patatin-like phospholipase domainPFAMPF01734Patatincoord: 21..63
e-value: 1.8E-6
score: 28.3
IPR002641Patatin-like phospholipase domainPROSITEPS51635PNPLAcoord: 1..63
score: 12.941862
NoneNo IPR availableGENE3D3.40.1090.10Cytosolic phospholipase A2 catalytic domaincoord: 6..113
e-value: 4.2E-18
score: 67.7
NoneNo IPR availablePANTHERPTHR24185CALCIUM-INDEPENDENT PHOSPHOLIPASE A2-GAMMAcoord: 21..83
NoneNo IPR availablePANTHERPTHR24185:SF1CALCIUM-INDEPENDENT PHOSPHOLIPASE A2-GAMMAcoord: 21..83
IPR016035Acyl transferase/acyl hydrolase/lysophospholipaseSUPERFAMILY52151FabD/lysophospholipase-likecoord: 19..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_43contigContig_43:959082..959426 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|166335mRNA_13777Tribonema minus UTEX_B_3156 mRNAContig_43 959082..959426 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|166335|e_gw1.43.45.1 ID=Trimin1|166335|e_gw1.43.45.1|Name=jgi.p|Trimin1|166335|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=115bp
MHCQITLISPFTSAPPPPPLSQQIWECVRATTAAPTYFKPLQKGAMLFGD
GALLANNPTAVALAEARLIYPGVPVEAVVSIGEFRQCGPELALRRHCLQV
FAGFKVPQNYMHLL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002641PNPLA_dom
IPR016035Acyl_Trfase/lysoPLipase