Trimin1|349427|estExt_Genemark1.C_Ctg_420117 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|349427
Unique NameTrimin1|349427|estExt_Genemark1.C_Ctg_420117
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length661
Homology
BLAST of jgi.p|Trimin1|349427 vs. uniprot
Match: A0A836CC25_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC25_9STRA)

HSP 1 Score: 1038 bits (2683), Expect = 0.000e+0
Identity = 660/660 (100.00%), Postives = 660/660 (100.00%), Query Frame = 0
Query:    1 MQVLDDVEAKMRLELDWQRYCAARPKFERVLXXXXXXXXXXXXXXXXXXXLLAHGRVLAERRQRERAAAAAVTDDHVTAAERVQGVGNLFPAVQMGFVVAQLFDGGGGGGEAAVALEALPFQAVLDRIGAAPRPHTLALARYDYRRSGLTGAWESLAALRRRGCLLADPRLDAQNFVDACREGDIAQVQRRLLQGADPDAVDAQGNTGAHAAAAEARLDVLAALAXXXXXXEARNARMETPLLHAVRRGSASGAAALLLPPWRAALGALDRGRRGVVALAVMAGSMECLALALDNGASVHKKDAQWGWTPLHHAAHSGALQAISLLLSRRASIYALSDEGQTPLQVAEGAKQEAAARLLRARAADEPAHVVMVLDNSTEIWLGSCAAARAGWAQDRGFTAVLSVNDGGEEWSQRAVAWLAEPDCSTAHLLIEAPLGGAGGAKGGRAWGGVCGSAQGLASAVAFIDAARRRRARVLLHCSDGRCACAGVWAAYSPACSATSAVAKADSPVALLLLSLLXXXXXXXXXXXXXXPPLPXXXXLXXXXXXXXXXXXXXXXXLPPSLXXXXXXXXXXXXXXSLPLXXXXXXXXXXXXXXXXXXPLLRDGMHVRDTLAKVRAARPCTAVTRAVAAALQALQDDFVAERNRRLEARVRNAPILSIGF 660
            MQVLDDVEAKMRLELDWQRYCAARPKFERVLXXXXXXXXXXXXXXXXXXXLLAHGRVLAERRQRERAAAAAVTDDHVTAAERVQGVGNLFPAVQMGFVVAQLFDGGGGGGEAAVALEALPFQAVLDRIGAAPRPHTLALARYDYRRSGLTGAWESLAALRRRGCLLADPRLDAQNFVDACREGDIAQVQRRLLQGADPDAVDAQGNTGAHAAAAEARLDVLAALAXXXXXXEARNARMETPLLHAVRRGSASGAAALLLPPWRAALGALDRGRRGVVALAVMAGSMECLALALDNGASVHKKDAQWGWTPLHHAAHSGALQAISLLLSRRASIYALSDEGQTPLQVAEGAKQEAAARLLRARAADEPAHVVMVLDNSTEIWLGSCAAARAGWAQDRGFTAVLSVNDGGEEWSQRAVAWLAEPDCSTAHLLIEAPLGGAGGAKGGRAWGGVCGSAQGLASAVAFIDAARRRRARVLLHCSDGRCACAGVWAAYSPACSATSAVAKADSPVALLLLSLLXXXXXXXXXXXXXXPPLPXXXXLXXXXXXXXXXXXXXXXXLPPSLXXXXXXXXXXXXXXSLPLXXXXXXXXXXXXXXXXXXPLLRDGMHVRDTLAKVRAARPCTAVTRAVAAALQALQDDFVAERNRRLEARVRNAPILSIGF
Sbjct:    1 MQVLDDVEAKMRLELDWQRYCAARPKFERVLXXXXXXXXXXXXXXXXXXXLLAHGRVLAERRQRERAAAAAVTDDHVTAAERVQGVGNLFPAVQMGFVVAQLFDGGGGGGEAAVALEALPFQAVLDRIGAAPRPHTLALARYDYRRSGLTGAWESLAALRRRGCLLADPRLDAQNFVDACREGDIAQVQRRLLQGADPDAVDAQGNTGAHAAAAEARLDVLAALAXXXXXXEARNARMETPLLHAVRRGSASGAAALLLPPWRAALGALDRGRRGVVALAVMAGSMECLALALDNGASVHKKDAQWGWTPLHHAAHSGALQAISLLLSRRASIYALSDEGQTPLQVAEGAKQEAAARLLRARAADEPAHVVMVLDNSTEIWLGSCAAARAGWAQDRGFTAVLSVNDGGEEWSQRAVAWLAEPDCSTAHLLIEAPLGGAGGAKGGRAWGGVCGSAQGLASAVAFIDAARRRRARVLLHCSDGRCACAGVWAAYSPACSATSAVAKADSPVALLLLSLLXXXXXXXXXXXXXXPPLPXXXXLXXXXXXXXXXXXXXXXXLPPSLXXXXXXXXXXXXXXSLPLXXXXXXXXXXXXXXXXXXPLLRDGMHVRDTLAKVRAARPCTAVTRAVAAALQALQDDFVAERNRRLEARVRNAPILSIGF 660          
BLAST of jgi.p|Trimin1|349427 vs. uniprot
Match: D8LNE8_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNE8_ECTSI)

HSP 1 Score: 232 bits (592), Expect = 9.020e-64
Identity = 170/483 (35.20%), Postives = 243/483 (50.31%), Query Frame = 0
Query:   10 KMRLELDWQRYCAARPKFERVLXXXXXXXXXXXXXXXXXXXLLAHGRVLAERRQRERAAAAAVTDDHVTAAERVQGVGNLFPAVQMGFVVAQLFDGGGGGGEAAVALEALPFQAVLDRIGAAPRPHTLALARYDYRRSGLTGAWESLAALRRRGCLLADPRLDAQNFVDACREGDIAQVQRRLLQGADPDAVDAQGNTGAHAAAAEARLDVLAALAXXXXXXEARNARMETPLLHAVRRGSASGAAALLLPPWRAALGALDRGRRGVVALAVMAGSMECLALALDNGASVHKKDAQWGWTPLHHAAHSGALQAISLLLSRRASIYALSDEGQTPLQVAEGAKQEAAARLLRARAADEPAHVVMVLDNSTEIWLGSCAAARAGWAQDRGFTAVLSVNDGGEEWSQRAVAWLAEPDCSTAHLLIEAPLGGAGGAKGGRAWGGVCGSAQGLASAVAFIDAARRRRARVLLHCSDGRCACAGVWAAY 492
            K+ L+  W++YCA  P +E++L                   +LAHGR +A+ ++ E  AA  +TDDHV A +R + +G++FP++++GF++ +LF      G   + LE +PF+ VL  + AAPRPHTL   RYD   + LT  WE+L  +R++G  + D R +   FV AC EGDI ++Q RL +G D ++ D QGNTG H AAA +         XXXXXX                                                A+++ S    AL +D   ++   D QWGWT LH AAH G ++ +  LL +RAS YA S  GQTPL VA  A+Q     LL A    EPAH V + +    IW GS AAA   WA D+GF  +LS+ D    +  + + WL E D    HL +EA +     +   RAW  +   AQ     ++F+  A RRR ++L+HC +GR     +  AY
Sbjct:  116 KLELQSQWEKYCAMEPMYEKILAAKEQYDLVKVDREQAQADVLAHGRTMAKLKREEVEAAEKITDDHVHACDRGKSLGDIFPSIRVGFIITRLF------GIVNLNLEDVPFEEVLLELKAAPRPHTLEFLRYDMNFNRLTLKWETLEEVRQQGKYVRDAREERLYFVKACAEGDIDRLQIRLDRGEDVESTDLQGNTGMHVAAANSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXAILSKSEVMAALFMDYSVALQATDVQWGWTALHCAAHVGMVKVVENLLGKRASPYAESKIGQTPLDVASRARQIKTTALLEAFLRAEPAHEV-IAEAGANIWQGSHAAAHPVWASDQGFECILSIVD--PRFPDKKLGWL-EDDGDVRHLRVEAEVDDEDTSP--RAWNNI---AQHTRVIISFLYTAVRRRKKILVHCRNGRSTSVAMLTAY 581          
BLAST of jgi.p|Trimin1|349427 vs. uniprot
Match: A0A381XMI9_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381XMI9_9ZZZZ)

HSP 1 Score: 60.8 bits (146), Expect = 4.240e-6
Identity = 39/83 (46.99%), Postives = 50/83 (60.24%), Query Frame = 0
Query:  280 AVMAGSMECLALALDNGASVHKKDAQWGWTPLHHAAHSGALQAISLLLSRRASIYALSDEGQTPLQVAEGAKQEAAARLLRAR 362
            A  A   E   L L++GA    +    GWTPLH AA  G+   I+LLL RRA + A+S  G TPL +A+G +Q AAA LL+AR
Sbjct:  252 AAEADQAEAAELLLNHGADKTAR-TDGGWTPLHSAAAKGSTNVIALLLKRRAPVNAISQSG-TPLDLAKGYQQPAAAELLQAR 332          
BLAST of jgi.p|Trimin1|349427 vs. uniprot
Match: A0A432F1V5_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A432F1V5_9BACT)

HSP 1 Score: 59.7 bits (143), Expect = 1.150e-5
Identity = 36/76 (47.37%), Postives = 47/76 (61.84%), Query Frame = 0
Query:  287 ECLALALDNGASVHKKDAQWGWTPLHHAAHSGALQAISLLLSRRASIYALSDEGQTPLQVAEGAKQEAAARLLRAR 362
            E   L L++GA    +    GWTPLH AA  G+   I+LLL RRA + A+S  G TPL +A+G KQ AAA L+ A+
Sbjct:  259 EAAELLLNHGADKSAR-TDGGWTPLHSAAAKGSTNVIALLLKRRAPVNAISQSG-TPLDLAKGYKQPAAAALIEAK 332          
BLAST of jgi.p|Trimin1|349427 vs. uniprot
Match: A0A2D5WDR6_9BACT (Uncharacterized protein n=2 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A2D5WDR6_9BACT)

HSP 1 Score: 59.7 bits (143), Expect = 1.200e-5
Identity = 40/83 (48.19%), Postives = 47/83 (56.63%), Query Frame = 0
Query:  280 AVMAGSMECLALALDNGASVHKKDAQWGWTPLHHAAHSGALQAISLLLSRRASIYALSDEGQTPLQVAEGAKQEAAARLLRAR 362
            A  A   E   L L +GA    +    GWTPLH AA  G+   ISLLL RRA + A+S  G TPL +A G KQ AAA LL A+
Sbjct:  273 AAEADQAEAAELLLKHGADKTAR-TDGGWTPLHSAAAKGSTNVISLLLLRRAPVNAISQSG-TPLDLARGYKQPAAAALLEAK 353          
BLAST of jgi.p|Trimin1|349427 vs. uniprot
Match: A0A6I2L406_9BURK (Ankyrin repeat domain-containing protein n=1 Tax=Duganella guangzhouensis TaxID=2666084 RepID=A0A6I2L406_9BURK)

HSP 1 Score: 55.5 bits (132), Expect = 6.320e-5
Identity = 61/209 (29.19%), Postives = 94/209 (44.98%), Query Frame = 0
Query:  163 GCLLADPRLDAQ------NFVDACREGDIAQVQRRLLQGADPDAVDAQGNTGAHAAAAEARLDVLAALAXXXXXXEARNARMETPLLHAVRRGSASGAAALLLPPWRAALGALDRGRRGVVALAVMAGSMECLALALDNGASVHKKDAQWGWTPLHHAAHSGALQAISLLLSRRASIYALSDEGQTPLQVAEGAKQEAAARLLRARAAD 365
            G  LA P + A+      +F  A +   + +V++ L +G +P+A DA G TG   A     L+V   L             M TP +  +   + +G  AL++  +R       + +  V+ L             L +GA V++K    GWT LH+AA +G+++  +LLL + A I A S  G TPL +A    QE    LL    AD
Sbjct:   12 GAALALPAMAAEQSDDEVDFFRAAQLDGVERVKKALARGVNPNARDANGETGLIVAMRYEALNVGRLL-------------MNTPGID-LEAKAPNGNTALMMAAFR-------QNKPAVLEL-------------LKHGAQVNQK----GWTALHYAAAAGSVELTALLLDKHAYIDAESPSGMTPLMIAAREGQEDVVALLLKEGAD 182          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349427 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A836CC25_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LNE8_ECTSI9.020e-6435.20Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A381XMI9_9ZZZZ4.240e-646.99Uncharacterized protein (Fragment) n=1 Tax=marine ... [more]
A0A432F1V5_9BACT1.150e-547.37Uncharacterized protein n=1 Tax=Verrucomicrobia ba... [more]
A0A2D5WDR6_9BACT1.200e-548.19Uncharacterized protein n=2 Tax=Verrucomicrobiales... [more]
A0A6I2L406_9BURK6.320e-529.19Ankyrin repeat domain-containing protein n=1 Tax=D... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 306..335
e-value: 0.0037
score: 26.5
coord: 339..369
e-value: 3000.0
score: 1.4
coord: 204..233
e-value: 190.0
score: 10.4
coord: 272..301
e-value: 200.0
score: 10.2
IPR002110Ankyrin repeatPFAMPF12796Ank_2coord: 279..363
e-value: 6.7E-10
score: 39.4
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 306..338
score: 10.36565
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 204..236
score: 8.86989
IPR029021Protein-tyrosine phosphatase-likeGENE3D3.90.190.10Protein tyrosine phosphatase superfamilycoord: 374..653
e-value: 4.3E-9
score: 38.1
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 270..373
e-value: 1.6E-18
score: 69.1
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 168..269
e-value: 3.1E-14
score: 54.8
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 177..362
NoneNo IPR availablePIRSRPIRSR000939-1PIRSR000939-1coord: 459..492
e-value: 0.0065
score: 13.1
NoneNo IPR availablePANTHERPTHR24180CYCLIN-DEPENDENT KINASE INHIBITOR 2C-RELATEDcoord: 176..259
coord: 280..401
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 306..333
score: 9.383383

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_42contigContig_42:888303..895230 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349427mRNA_5722Tribonema minus UTEX_B_3156 mRNAContig_42 888303..895505 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|349427|estExt_Genemark1.C_Ctg_420117 ID=Trimin1|349427|estExt_Genemark1.C_Ctg_420117|Name=jgi.p|Trimin1|349427|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=661bp
MQVLDDVEAKMRLELDWQRYCAARPKFERVLAAEAEADRAVAARDSAQRA
LLAHGRVLAERRQRERAAAAAVTDDHVTAAERVQGVGNLFPAVQMGFVVA
QLFDGGGGGGEAAVALEALPFQAVLDRIGAAPRPHTLALARYDYRRSGLT
GAWESLAALRRRGCLLADPRLDAQNFVDACREGDIAQVQRRLLQGADPDA
VDAQGNTGAHAAAAEARLDVLAALAAAGAAAEARNARMETPLLHAVRRGS
ASGAAALLLPPWRAALGALDRGRRGVVALAVMAGSMECLALALDNGASVH
KKDAQWGWTPLHHAAHSGALQAISLLLSRRASIYALSDEGQTPLQVAEGA
KQEAAARLLRARAADEPAHVVMVLDNSTEIWLGSCAAARAGWAQDRGFTA
VLSVNDGGEEWSQRAVAWLAEPDCSTAHLLIEAPLGGAGGAKGGRAWGGV
CGSAQGLASAVAFIDAARRRRARVLLHCSDGRCACAGVWAAYSPACSATS
AVAKADSPVALLLLSLLLLPPLLALPPPPLLPPLPPPPPLPPSLPLPLPP
PPPLPAPLPPSLPLLPALPPPPPLPPSLPLPPPPPLPAPLPPSLPPLPPL
LRDGMHVRDTLAKVRAARPCTAVTRAVAAALQALQDDFVAERNRRLEARV
RNAPILSIGF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR029021Prot-tyrosine_phosphatase-like
IPR036770Ankyrin_rpt-contain_sf