Trimin1|349413|estExt_Genemark1.C_Ctg_420095 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|349413
Unique NameTrimin1|349413|estExt_Genemark1.C_Ctg_420095
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length263
Homology
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BLAST of jgi.p|Trimin1|349413 vs. uniprot
Match: A0A835Z230_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z230_9STRA)

HSP 1 Score: 494 bits (1271), Expect = 4.840e-176
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0 
Query:    1 MRKLYQMIANEDRRAERLKIKREKADLEVLEAQQLLALQEEGMVAATKPIIAPIATADAEDCKDAALDISTDSDETSSLLAAAAMEWSLIFSSLLSFSGTGSYRNSGQVLMKVIARRGTEQPKESQATCQHVAECACGEAMLAMGGDGVHVDEAEIPDVPVGATIVIAKVPAETEHEQPEGYWPAQVLCMHEVAQEIMEGRQAFPERRQVLLRLLAFKGHHELRWVDARDLSAYEADEYVNSADTGAAGMCASGAEAWAAALA 263
            MRKLYQMIANEDRRAERLKIKREKADLEVLEAQQLLALQEEGMVAATKPIIAPIATADAEDCKDAALDISTDSDETSSLLAAAAMEWSLIFSSLLSFSGTGSYRNSGQVLMKVIARRGTEQPKESQATCQHVAECACGEAMLAMGGDGVHVDEAEIPDVPVGATIVIAKVPAETEHEQPEGYWPAQVLCMHEVAQEIMEGRQAFPERRQVLLRLLAFKGHHELRWVDARDLSAYEADEYVNSADTGAAGMCASGAEAWAAALA
Sbjct:    1 MRKLYQMIANEDRRAERLKIKREKADLEVLEAQQLLALQEEGMVAATKPIIAPIATADAEDCKDAALDISTDSDETSSLLAAAAMEWSLIFSSLLSFSGTGSYRNSGQVLMKVIARRGTEQPKESQATCQHVAECACGEAMLAMGGDGVHVDEAEIPDVPVGATIVIAKVPAETEHEQPEGYWPAQVLCMHEVAQEIMEGRQAFPERRQVLLRLLAFKGHHELRWVDARDLSAYEADEYVNSADTGAAGMCASGAEAWAAALA 263
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349413 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835Z230_9STRA4.840e-176100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_42contigContig_42:662021..673244 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349413mRNA_5700Tribonema minus UTEX_B_3156 mRNAContig_42 662021..673244 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|349413|estExt_Genemark1.C_Ctg_420095 ID=Trimin1|349413|estExt_Genemark1.C_Ctg_420095|Name=jgi.p|Trimin1|349413|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=263bp
MRKLYQMIANEDRRAERLKIKREKADLEVLEAQQLLALQEEGMVAATKPI
IAPIATADAEDCKDAALDISTDSDETSSLLAAAAMEWSLIFSSLLSFSGT
GSYRNSGQVLMKVIARRGTEQPKESQATCQHVAECACGEAMLAMGGDGVH
VDEAEIPDVPVGATIVIAKVPAETEHEQPEGYWPAQVLCMHEVAQEIMEG
RQAFPERRQVLLRLLAFKGHHELRWVDARDLSAYEADEYVNSADTGAAGM
CASGAEAWAAALA
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