Trimin1|349377|estExt_Genemark1.C_Ctg_420045 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|349377
Unique NameTrimin1|349377|estExt_Genemark1.C_Ctg_420045
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length196
Homology
BLAST of jgi.p|Trimin1|349377 vs. uniprot
Match: A0A836CCP9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCP9_9STRA)

HSP 1 Score: 375 bits (963), Expect = 2.470e-131
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0
Query:    1 MIADLISNPFDPQINALFLVIFNALGIMPAVFAQLLLPASKDQKPVPAAPFVLGSFAGGLFLLGPYLALRQYRPRVDETSLGGLAKATNSKIGGVLTLVSACGLVAYAVQSGALATLPEFLTLFNAQTLVHVSTVDLSLLSLVMWEPMLEDMRRRGAYTDGSGSQKLKLAAFCAIPVLGPAAYVATRPPLLPLDE 195
            MIADLISNPFDPQINALFLVIFNALGIMPAVFAQLLLPASKDQKPVPAAPFVLGSFAGGLFLLGPYLALRQYRPRVDETSLGGLAKATNSKIGGVLTLVSACGLVAYAVQSGALATLPEFLTLFNAQTLVHVSTVDLSLLSLVMWEPMLEDMRRRGAYTDGSGSQKLKLAAFCAIPVLGPAAYVATRPPLLPLDE
Sbjct:    1 MIADLISNPFDPQINALFLVIFNALGIMPAVFAQLLLPASKDQKPVPAAPFVLGSFAGGLFLLGPYLALRQYRPRVDETSLGGLAKATNSKIGGVLTLVSACGLVAYAVQSGALATLPEFLTLFNAQTLVHVSTVDLSLLSLVMWEPMLEDMRRRGAYTDGSGSQKLKLAAFCAIPVLGPAAYVATRPPLLPLDE 195          
BLAST of jgi.p|Trimin1|349377 vs. uniprot
Match: A0A836CEA7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEA7_9STRA)

HSP 1 Score: 246 bits (629), Expect = 2.250e-79
Identity = 125/195 (64.10%), Postives = 155/195 (79.49%), Query Frame = 0
Query:    1 MIADLISNPFDPQINALFLVIFNALGIMPAVFAQLLLPASKDQKPVPAAPFVLGSFAGGLFLLGPYLALRQYRPRVDETSLGGLAKATNSKIGGVLTLVSACGLVAYAVQSGALATLPEFLTLFNAQTLVHVSTVDLSLLSLVMWEPMLEDMRRRGAYTDGSGSQKLKLAAFCAIPVLGPAAYVATRPPLLPLDE 195
            M A L++NPF P IN L++VIFNALG++PA++AQLLLP SK Q+ +PAAPFVL SFAGG FLL PYLALRQYRP VDE  L GLA  +  ++GGVLTLV A GL+ +A+ +    +  E++ LF +QTLVHVS++DL LLS+V+WEPMLEDMRRRG YTDGS S  ++LAAFCAIPVLGPA Y+A RPPLL  ++
Sbjct:   78 MTAALMTNPFSPDINQLYVVIFNALGVVPAIYAQLLLPGSKGQR-LPAAPFVLASFAGGYFLLAPYLALRQYRPCVDEAQLRGLATLSTLRLGGVLTLVFALGLLQFAITNHVWTSFEEYMLLFRSQTLVHVSSIDLLLLSVVVWEPMLEDMRRRGMYTDGSRSANIRLAAFCAIPVLGPAVYLAVRPPLLAAED 271          
BLAST of jgi.p|Trimin1|349377 vs. uniprot
Match: A0A6U8J661_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A6U8J661_9EUGL)

HSP 1 Score: 159 bits (401), Expect = 5.770e-42
Identity = 92/181 (50.83%), Postives = 119/181 (65.75%), Query Frame = 0
Query:   10 FDPQINALFLVIFNALGIMPAVFAQLLLPASKDQKPVPAAPFVLGSFAGGLFLLGPYLALRQYRPRVDETSLGGLAKATNSKIGGVLTLVSACGLVAYAVQSGALATLPEFLTLFNAQTLVHVSTVDLSLLSLVMWEPMLEDMRRRGAYTDGSGSQKLKLAAFCAIPVLGPAAYVATRPPL 190
            +  +   +F  IFN+LGIMPAV+A LLLP SKDQ+ +PA PF+ GSFA G F L PYLALR++RP     S+GG  K   +KI      VSA GLVAY +Q  A    P +L LF +Q LVHVS++DL++LS V    ++EDM+RRG Y  G    K  +AAF ++PV+GPAAY+  RP L
Sbjct:  478 YTGEAGHIFFSIFNSLGIMPAVYAALLLPGSKDQR-LPAVPFIAGSFALGFFALAPYLALREWRPYAPA-SIGGFTKLMENKINATFLFVSALGLVAYGLQDFA-TQWPLYLDLFGSQKLVHVSSLDLTILSCVFPFTVIEDMQRRGWYQTGDAKDKAVVAAF-SVPVIGPAAYLLLRPKL 654          
BLAST of jgi.p|Trimin1|349377 vs. uniprot
Match: A0A0M0JJ94_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JJ94_9EUKA)

HSP 1 Score: 139 bits (350), Expect = 8.410e-38
Identity = 91/193 (47.15%), Postives = 124/193 (64.25%), Query Frame = 0
Query:   16 ALFLVIFNALGIMPAVFAQLLLPASKDQKPVPAAPFVLGSFAGGLFLLGPYLALRQYRPR-VDETSLGGLAKA-TNSKIGGVLTLVSACGLVAYAVQSGALATLPEF-------LTLFNAQTLVHVSTVDLSLLSLVMWEPMLEDMRRRGAYT----DGSGSQKLKLAAFCAIPVLGPAAYVATRPPLLPLDE 195
            ++F VIFNALG++PA++A +LLP +KDQ+P P A  +  SF  G   LGPYL LRQ RP+ +    LG +A+  T SK+ GV  ++++ GL A       LAT+P+F        +LF+   +V+VS+ DL +LSL  +EP+ EDM+RRG Y     D S  +  +LAAFCA+PVLGPAAYV  RP  LPL E
Sbjct:   40 SIFFVIFNALGVLPALYAAVLLPGAKDQRPAPPA-LIATSFFAGFGGLGPYLFLRQPRPQPISRAELGFIARTVTESKLFGVAMVLTSLGLGAK------LATIPDFDAALATYWSLFDQFGIVNVSSFDLLVLSLFFFEPLREDMQRRGWYAAPGEDPSTEEIARLAAFCAVPVLGPAAYVLARP-ALPLTE 224          
BLAST of jgi.p|Trimin1|349377 vs. uniprot
Match: A0A7S4BI97_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BI97_CHRCT)

HSP 1 Score: 139 bits (350), Expect = 1.130e-36
Identity = 84/184 (45.65%), Postives = 116/184 (63.04%), Query Frame = 0
Query:   13 QINALFLVIFNALGIMPAVFAQLLLPASKDQKPVPAAPFVLGSFAGGLFLLGPYLALRQYRPRVDETSLGGL-AKATNSKIGGVLTLVSACGLVAYAVQSGA-LATLPEFLTLFNAQTLVHVSTVDLSLLSLVMWEPMLEDMRRRG-AYTDG---SGSQKLKLAAFCAIPVLGPAAYVATRPPL 190
             INA F   FN+LG++PAV+A LLLP +++Q+P+PA PFV  S A G F + PYL  RQ R  V + S GGL A+   S++     + +A  L A A+ S    A L EF+ +F    L H+ST+DL +LS ++WEPMLEDMRRR  A++ G   + +Q  +L AF  +PV+GP  Y+ TRP L
Sbjct:  147 DINAYFFCTFNSLGVLPAVYAALLLPGAEEQRPLPALPFVGSSIALGYFGIAPYLVFRQPRTEVTQQSFGGLLARVLESRLYAAPLVAAAIALAARAIGSADDPAVLDEFVNIFQTSQLAHISTIDLVILSSIIWEPMLEDMRRRQWAWSAGETPTAAQLGRLLAFL-VPVVGPTLYLLTRPRL 329          
BLAST of jgi.p|Trimin1|349377 vs. uniprot
Match: A0A7S0J5P6_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J5P6_9EUKA)

HSP 1 Score: 141 bits (355), Expect = 4.820e-36
Identity = 93/193 (48.19%), Postives = 119/193 (61.66%), Query Frame = 0
Query:    5 LISNPF-DPQ-INALFLVIFNALGIMPAVFAQLLLPASKDQKPVPAAPFVLGSFAGGLFLLGPYLALRQYRPR-VDETSLGGLAK-ATNSKI--GGVLTLVSACGLVAYAVQSGALATLPEFLTLFNAQTLVHVSTVDLSLLSLVMWEPMLEDMRRRGAYTDGSGSQKL-KLAAFCAIPVLGPAAYVATRPPL 190
            LISN   DPQ +N +F  +FNALG++PAV   LLLP +  QKP+P APFV  SFA G   LGPYLALR+ RP  +  + LG +A+  T SK+   G+L    A G    A      A L EF  LF    LVHVST+D ++LS   +EP+ EDM RRG + D +    + +LAAFC +PV+GP AY+  RPPL
Sbjct:  327 LISNAIADPQSLNPIFFAVFNALGVLPAVNLALLLPGANGQKPLPTAPFVGASFALGYGALGPYLALREPRPSAISRSELGFVARYVTESKLYAAGLLAASMALG-YGLATIVDVPAALSEFNQLFETSKLVHVSTIDFAILSTFAFEPIREDMSRRGWWDDDAADNNVGRLAAFC-VPVVGPCAYLLLRPPL 517          
BLAST of jgi.p|Trimin1|349377 vs. uniprot
Match: C1EIA9_MICCC (Uncharacterized protein n=2 Tax=Micromonas TaxID=38832 RepID=C1EIA9_MICCC)

HSP 1 Score: 132 bits (333), Expect = 6.000e-35
Identity = 81/193 (41.97%), Postives = 113/193 (58.55%), Query Frame = 0
Query:    1 MIADLISNPFDPQINALFLVIFNALGIMPAVFAQLLLPASKDQKPVPAAPFVLGSFAGGLFLLGPYLALRQYRPR-VDETSLGGLAKAT-NSKIGGVLTLVSACGLVAYAVQSGALATLPEFLTLFNAQT-LVHVSTVDLSLLSLVMWEPMLEDMRRRGAYTDGSGSQKLKLAAFCAIPVLGPAAYVATRPPL 190
            ++  L+S PF   +N +F  +FN+LG++PAV+A LLLP +KDQ  +P  P +  SFA G F LGPYL  R+ R   V  +SLG   +    SK+        A  L+AY   +        F+ ++  Q+ L  VS+ DL++LS+ M+  + EDMRRRG Y DG+     K AAFCA+PVLGP  Y+ TRP L
Sbjct:   65 LVTTLVSAPFSGAVNPIFEALFNSLGVVPAVYAALLLPGAKDQPRIPTVPPLAASFALGFFALGPYLIAREPRTEPVPRSSLGWATRTIFESKVFAAFNAAFAAFLIAYGAANFTSDAAEAFVAMWRDQSALACVSSCDLTVLSIAMYGALAEDMRRRGCY-DGA-----KAAAFCAVPVLGPCVYLLTRPSL 251          
BLAST of jgi.p|Trimin1|349377 vs. uniprot
Match: A0A7S0PWJ2_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0PWJ2_9EUKA)

HSP 1 Score: 132 bits (331), Expect = 4.170e-34
Identity = 87/184 (47.28%), Postives = 117/184 (63.59%), Query Frame = 0
Query:   16 ALFLVIFNALGIMPAVFAQLLLPASKDQKPVPAAPFVLGSFAGGLFLLGPYLALRQYRPRVDETSLGGLA---KATNSKIGGVLTLVSACGLVA--YAVQSGALATLPEFLTLFNAQTLVHVSTVDLSLLSLVMWEPMLEDMRRRGAYT----DGSGSQKLKLAAFCAIPVLGPAAYVATRPPL 190
            +LF VIFN+LG+MPA++A +LLP + DQ PVP    V GSFA G   LGPYLALR  RPR D  +L  L    K T +K+  V  ++SA  L +  + ++  A A +  +  LF+A  LV+VS+ DL +L L  +EP  EDMRRRG +     + +  Q ++L+AFCA+PVLGPAAYV  RP L
Sbjct:  125 SLFYVIFNSLGVMPALYAAVLLPGASDQAPVPPQTIV-GSFAFGYGALGPYLALR--RPRPDPVALSDLGFWGKLTENKVFAVAMVLSALSLGSKLFLIEDWASA-IATYSQLFDAFGLVNVSSFDLLVLQLFFFEPAREDMRRRGWWASPGENPTAEQIVRLSAFCAVPVLGPAAYVLARPSL 304          
BLAST of jgi.p|Trimin1|349377 vs. uniprot
Match: A0A7S3T492_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3T492_9SPIT)

HSP 1 Score: 131 bits (329), Expect = 8.620e-34
Identity = 87/194 (44.85%), Postives = 117/194 (60.31%), Query Frame = 0
Query:    5 LISNPFDP-QINALFLVIFNALGIMPAVFAQLLLPASKDQKPVPAAPFVLGSFAGGLFLLGPYLALRQYRPR-VDETSLGGLAKA-TNSKI-GGVLTLVSACGLVAYAVQSGALATLPEFLTLFNAQTLVHVSTVDLSLLSLVMWEPMLEDMRRRGAYTDGSGS----QKLKLAAFCAIPVLGPAAYVATRPPL 190
            LI    DP  I ++F V+FN+LGIMPA++A  LLP +K+Q P+PAAPF+  +F  G    GPYLALRQ R   V  + LG +A+  T S++ GG + L S   L          A +  +  LF++  LV+VS+ DL +LS   +EP  EDM+RRG Y   S      + L+LA+FCA+PVLGPA YV  RP L
Sbjct:  112 LIQECVDPASIPSIFFVVFNSLGIMPALYAATLLPGAKNQSPLPAAPFLAAAFFAGYGATGPYLALRQPRTEPVACSDLGFIARTITESRLFGGTMVLTSLLLLSKLLAIEDWDAAISVYRKLFDSSQLVNVSSFDLLVLSAFFFEPAREDMQRRGWYAAPSEQPTTIEILRLASFCAVPVLGPALYVLLRPSL 305          
BLAST of jgi.p|Trimin1|349377 vs. uniprot
Match: C1N5W8_MICPC (Predicted protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1N5W8_MICPC)

HSP 1 Score: 126 bits (317), Expect = 3.870e-32
Identity = 82/201 (40.80%), Postives = 112/201 (55.72%), Query Frame = 0
Query:    1 MIADLISNPFDPQINALFLVIFNALGIMPAVFAQLLLPASKDQKPVPAAPFVLGSFAGGLFLLGPYLALRQYR------PRVDETSLGGLAKATN----SKIGGVLTLVSACGLVAYAVQSGALATLPEFLTLFNAQT-LVHVSTVDLSLLSLVMWEPMLEDMRRRGAYTDGSGSQKLKLAAFCAIPVLGPAAYVATRPPL 190
            ++  L+++PF    N +F  +FN+LG++PAV+A LLLP ++DQ  VP  P V+ SFA G F LGPYL  R+ R      PR        L  AT     SK   +   + A  L+AYA       TL  F TL+  Q+ L  VS+ DL +LSL M++ + EDM+RRG +  G      K   FCA+PVLGP  ++ TRP L
Sbjct:   99 LVTSLVTSPFSGAANPIFEALFNSLGVVPAVYAALLLPGARDQPRVPTLPPVVASFALGFFALGPYLITRRVRVVLSTAPRTSAPRRSELGWATRTVFESKPFALFQTLFATFLIAYAASHVDAETLEGFATLWREQSALACVSSCDLLVLSLAMYDALSEDMKRRGVFERG------KALGFCALPVLGPCLWLLTRPAL 293          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349377 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CCP9_9STRA2.470e-131100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CEA7_9STRA2.250e-7964.10Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6U8J661_9EUGL5.770e-4250.83Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A0M0JJ94_9EUKA8.410e-3847.15Uncharacterized protein n=1 Tax=Chrysochromulina t... [more]
A0A7S4BI97_CHRCT1.130e-3645.65Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S0J5P6_9EUKA4.820e-3648.19Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
C1EIA9_MICCC6.000e-3541.97Uncharacterized protein n=2 Tax=Micromonas TaxID=3... [more]
A0A7S0PWJ2_9EUKA4.170e-3447.28Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S3T492_9SPIT8.620e-3444.85Hypothetical protein n=1 Tax=Strombidinopsis acumi... [more]
C1N5W8_MICPC3.870e-3240.80Predicted protein n=2 Tax=Micromonas pusilla TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36009FAMILY NOT NAMEDcoord: 13..190

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_42contigContig_42:313113..314151 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349377mRNA_5644Tribonema minus UTEX_B_3156 mRNAContig_42 313059..314219 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|349377|estExt_Genemark1.C_Ctg_420045 ID=Trimin1|349377|estExt_Genemark1.C_Ctg_420045|Name=jgi.p|Trimin1|349377|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=196bp
MIADLISNPFDPQINALFLVIFNALGIMPAVFAQLLLPASKDQKPVPAAP
FVLGSFAGGLFLLGPYLALRQYRPRVDETSLGGLAKATNSKIGGVLTLVS
ACGLVAYAVQSGALATLPEFLTLFNAQTLVHVSTVDLSLLSLVMWEPMLE
DMRRRGAYTDGSGSQKLKLAAFCAIPVLGPAAYVATRPPLLPLDE*
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