mRNA_5618 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|349360 vs. uniprot
Match: A0A835YSG2_9STRA (Sec1-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSG2_9STRA) HSP 1 Score: 1075 bits (2779), Expect = 0.000e+0 Identity = 562/562 (100.00%), Postives = 562/562 (100.00%), Query Frame = 1 Query: 1 MNVIAAVKSYVDRIVSDGRLEGMKALLLDSTTTQIVSMVYSQSQVMEKEVYLVELLGAKRDRMPHLKAAVFIQPTLESVAALCREVSNPRFSEYHVFFSNVVHQDLLQQLASADGEHEVVRQVQEYYADFAALNEDFFTANVRRGPSQPSGSAPFTRNVNALLSMLLSVKRKPAQIRYAASSQQARKVAAEASSQIAADSIFDFRRQDGPLLLVLDRKDDPVTPLLSQWTYQAMVHELLGLTDNRCVLRGAPGVRKELEEVVLSCTQDDFFAKNRYANFGDLGAAVKGLMDEYQRLSKLNENIQTIEDMQAFLERFPAFKSQSLNVSKHVAVLSELARLVDERVLLDVSQLEQELACSDDQAGHQRALLEKIASPRIQPGDKLRLAMLYALRYEDNPNFNMRSLKLKLADGGVPPDKSALLDALIGFGGRAQRGLGLYGQGNLMSMIGKSITSSLQGVENVYSQHVPYVMTVIEAALKGKLKDKEYPSLTGAQLTGRPQEMIVYIVGGVTYEEAAKIAELNAASPNFSVVLGGSCVLNSSAFLEDLTQPLSSSMQPMEMGYR 1686 MNVIAAVKSYVDRIVSDGRLEGMKALLLDSTTTQIVSMVYSQSQVMEKEVYLVELLGAKRDRMPHLKAAVFIQPTLESVAALCREVSNPRFSEYHVFFSNVVHQDLLQQLASADGEHEVVRQVQEYYADFAALNEDFFTANVRRGPSQPSGSAPFTRNVNALLSMLLSVKRKPAQIRYAASSQQARKVAAEASSQIAADSIFDFRRQDGPLLLVLDRKDDPVTPLLSQWTYQAMVHELLGLTDNRCVLRGAPGVRKELEEVVLSCTQDDFFAKNRYANFGDLGAAVKGLMDEYQRLSKLNENIQTIEDMQAFLERFPAFKSQSLNVSKHVAVLSELARLVDERVLLDVSQLEQELACSDDQAGHQRALLEKIASPRIQPGDKLRLAMLYALRYEDNPNFNMRSLKLKLADGGVPPDKSALLDALIGFGGRAQRGLGLYGQGNLMSMIGKSITSSLQGVENVYSQHVPYVMTVIEAALKGKLKDKEYPSLTGAQLTGRPQEMIVYIVGGVTYEEAAKIAELNAASPNFSVVLGGSCVLNSSAFLEDLTQPLSSSMQPMEMGYR Sbjct: 1 MNVIAAVKSYVDRIVSDGRLEGMKALLLDSTTTQIVSMVYSQSQVMEKEVYLVELLGAKRDRMPHLKAAVFIQPTLESVAALCREVSNPRFSEYHVFFSNVVHQDLLQQLASADGEHEVVRQVQEYYADFAALNEDFFTANVRRGPSQPSGSAPFTRNVNALLSMLLSVKRKPAQIRYAASSQQARKVAAEASSQIAADSIFDFRRQDGPLLLVLDRKDDPVTPLLSQWTYQAMVHELLGLTDNRCVLRGAPGVRKELEEVVLSCTQDDFFAKNRYANFGDLGAAVKGLMDEYQRLSKLNENIQTIEDMQAFLERFPAFKSQSLNVSKHVAVLSELARLVDERVLLDVSQLEQELACSDDQAGHQRALLEKIASPRIQPGDKLRLAMLYALRYEDNPNFNMRSLKLKLADGGVPPDKSALLDALIGFGGRAQRGLGLYGQGNLMSMIGKSITSSLQGVENVYSQHVPYVMTVIEAALKGKLKDKEYPSLTGAQLTGRPQEMIVYIVGGVTYEEAAKIAELNAASPNFSVVLGGSCVLNSSAFLEDLTQPLSSSMQPMEMGYR 562
BLAST of jgi.p|Trimin1|349360 vs. uniprot
Match: D7FJK3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJK3_ECTSI) HSP 1 Score: 691 bits (1783), Expect = 7.520e-244 Identity = 366/566 (64.66%), Postives = 453/566 (80.04%), Query Frame = 1 Query: 1 MNVIAAVKSYVDRIVSDGRLEGMKALLLDSTTTQIVSMVYSQSQVMEKEVYLVELLGAKRDRMPHLKAAVFIQPTLESVAALCREVSNPRFSEYHVFFSNVVHQDLLQQLASADGEHEVVRQVQEYYADFAALNEDFFTAN----VRRGPSQPSGSAP--FTRNVNALLSMLLSVKRKPAQIRYAASSQQARKVAAEASSQIAADSIFDFRRQDGPLLLVLDRKDDPVTPLLSQWTYQAMVHELLGLTDNRCVLRGAPGVRKELEEVVLSCTQDDFFAKNRYANFGDLGAAVKGLMDEYQRLSKLNENIQTIEDMQAFLERFPAFKSQSLNVSKHVAVLSELARLVDERVLLDVSQLEQELACSDDQAGHQRALLEKIASPRIQPGDKLRLAMLYALRYEDNPNFNMRSLKLKLADGGVPPDKSALLDALIGFGGRAQRGLGLYGQGNLMSMIGKSITSSLQGVENVYSQHVPYVMTVIEAALKGKLKDKEYPSLTGAQLTGRPQEMIVYIVGGVTYEEAAKIAELNAASPNFSVVLGGSCVLNSSAFLEDLTQPLSSSMQPMEMG 1680 MNV +AV+ YVD+IVSD ++ GMK LLLD+ TTQ+V+MVYSQSQ++EKEVYLVE + A + M HLKA FI+PT E++ LC E+S PRF EYHVFF ++ +LLQQLA+AD EHEVVRQV EYYA+F A+NEDFF+AN ++ +P +A +RN +A+LS+LL++K+KP+ IRYA SS AR++A + S+QI AD IFDFRRQ GP+LL+LDR+DDPVTPLLSQWTYQAMVHELLGL DNR VL+GAPGVRK+LEEVVLSCTQDDFFAKNR++NFGDLG AVK LMDEYQ+ ++LNENI +IEDMQAFLER+PAF+SQSLNVSKHVAVLSELARLVD LLDVSQ EQELAC+DD H R L+EK+ S RI+ DKLRLAMLYALRYED N +R++K +L D G+ P+K LLDAL+ + G A RG GL+GQ NLMS +GK IT++LQGVENVY+QHVP +MT +EAALKGKLKD YP++ + G+ QE+IV++VGGVTYEEA K+AELNA+ P+ +VVLGGS V NS++FLE+L + Q +G Sbjct: 3 MNVTSAVRFYVDKIVSDPKISGMKVLLLDAVTTQVVAMVYSQSQILEKEVYLVERMDADHEPMQHLKAVYFIRPTKENIQTLCAEISKPRFLEYHVFFCSICPNELLQQLAAAD-EHEVVRQVHEYYAEFCAVNEDFFSANCPDTLQLALPRPPAAAKKLLSRNRDAVLSVLLALKKKPSTIRYAGSSSTARELAMDISAQIQADQIFDFRRQQGPVLLILDRRDDPVTPLLSQWTYQAMVHELLGLNDNRVVLKGAPGVRKDLEEVVLSCTQDDFFAKNRFSNFGDLGVAVKNLMDEYQKATRLNENINSIEDMQAFLERYPAFRSQSLNVSKHVAVLSELARLVDVYHLLDVSQFEQELACADDHVLHYRELMEKLTSSRIKAPDKLRLAMLYALRYEDMGN--LRAVKSRLLDSGLTPEKVDLLDALLQYSGNAARGPGLFGQDNLMSKLGKQITTTLQGVENVYAQHVPLMMTAVEAALKGKLKDSVYPAVGPSG--GKSQEVIVFMVGGVTYEEACKVAELNASLPSGNVVLGGSFVHNSTSFLEELNLSFGPASQERGLG 563
BLAST of jgi.p|Trimin1|349360 vs. uniprot
Match: A0A7S3M2G5_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M2G5_9STRA) HSP 1 Score: 582 bits (1501), Expect = 4.390e-201 Identity = 305/562 (54.27%), Postives = 418/562 (74.38%), Query Frame = 1 Query: 4 NVIAAVKSYVDRIVSDGRLEGMKALLLDSTTTQIVSMVYSQSQVMEKEVYLVELLGAKRDRMPHLKAAVFIQPTLESVAALCREVSNPRFSEYHVFFSNVVHQDLLQQLASADGEHEVVRQVQEYYADFAALNEDFFTANVRRGP--SQP-----SGSAPFTRNVNALLSMLLSVKRKPAQIRYAASSQQARKVAAEASSQIAADS-IFDFRRQDGPLLLVLDRKDDPVTPLLSQWTYQAMVHELLGLTDNRCVLRGAPGVRKELEEVVLSCTQDDFFAKNRYANFGDLGAAVKGLMDEYQRLSKLNENIQTIEDMQAFLERFPAFKSQSLNVSKHVAVLSELARLVDERVLLDVSQLEQELACSDDQAGHQRALLEKIASPRIQPGDKLRLAMLYALRYEDNPNFN-MRSLKLKLADGGVPPDKSALLDALIGFGGRAQRGLGLYGQGNLMSMIGKSITSSLQGVENVYSQHVPYVMTVIEAALKGKLKDKEYPSLTG--AQLTGRPQEMIVYIVGGVTYEEAAKIAELNAASPNFSVVLGGSCVLNSSAFLEDLTQPLSS 1656 +VIA+++ YVD++VSD + GMKALLLDS TT+IVSMVYSQ+Q++EKEVYLVE LG + M HLKAA++IQPT + L RE+ P+F EYH+FFSN+V D+L +L D EH+++ QV EYY D+ A+NE+FF + S P +A + RNVN +LS+LLS+KR P+ IRY SS+ AR++A++ S I +S +FDFRRQ+GPLLL+LDR+DDPVTPLL+QWTYQAMVHELLGL +NR VLRG PG+ KELEEVVLS TQD FFA NR+ANFGDLGAAVK L++EYQR +K NENI +IEDMQAF+ER+P F+S+S+NVSKHVAV+SEL+RL D LLD+S+LEQE++C++D H++ L+ +I + +++ DKLRLA+LY LRYE ++N ++ +K LA+ G+ + +LLDAL+ + G A+R GL+ G++M+ + K+ T+++ G ENVY+QH P +++ + KGK+KD +P L A RP E+IV+I+GG TYEEA K+AE N A+P V+LGGSCV NS++FL+++ S Sbjct: 8 DVIASIRFYVDKVVSDPSIGGMKALLLDSATTRIVSMVYSQTQILEKEVYLVEQLGKNHEGMNHLKAALYIQPTEANYELLVRELQAPKFKEYHIFFSNIVPGDMLTRLGRLD-EHDLIMQVHEYYGDYLAINEEFFHLGIENSLVLSSPYSRSLEAAAIYERNVNGVLSVLLSMKRSPSIIRYQGSSELARRLASDISGNIEKESGLFDFRRQEGPLLLILDRRDDPVTPLLTQWTYQAMVHELLGLNNNRVVLRGVPGIAKELEEVVLSPTQDAFFATNRHANFGDLGAAVKSLLEEYQRYAKKNENISSIEDMQAFMERYPDFRSKSINVSKHVAVISELSRLTDVCQLLDISELEQEISCANDHNLHKQELVTRIRNGKVKSADKLRLALLYLLRYE---SYNEVKEIKNLLAEKGLTGQQLSLLDALLAYAGDAKRAAGLFNSGSIMAKMAKTFTNTVHGAENVYTQHQPLLVSTLNELAKGKIKDSVFPPLAAGSAAAAARPSEVIVFIIGGATYEEATKVAEFNNANPTMKVLLGGSCVHNSTSFLKEIGSAFGS 565
BLAST of jgi.p|Trimin1|349360 vs. uniprot
Match: A0A482SMX5_9ARCH (Sec1 family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SMX5_9ARCH) HSP 1 Score: 555 bits (1430), Expect = 8.490e-191 Identity = 285/533 (53.47%), Postives = 403/533 (75.61%), Query Frame = 1 Query: 67 MKALLLDSTTTQIVSMVYSQSQVMEKEVYLVELLGAKRDRMPHLKAAVFIQPTLESVAALCREVSNPRFSEYHVFFSNVVHQDLLQQLASADGEHEVVRQVQEYYADFAALNEDFFTANVRRGPSQPSGSAP------FTRNVNALLSMLLSVKRKPAQIRYAASSQQARKVAAEASSQIAADSIFDFRRQDGPLLLVLDRKDDPVTPLLSQWTYQAMVHELLGLTDNRCVLRGAPGVRKELEEVVLSCTQDDFFAKNRYANFGDLGAAVKGLMDEYQRLSKLNENIQTIEDMQAFLERFPAFKSQSLNVSKHVAVLSELARLVDERVLLDVSQLEQELACSDDQAGHQRALLEKIASPRIQPGDKLRLAMLYALRYEDNPNFNMRSLKLKLADGGVPPDKSALLDALIGFGGRAQRGLGLYGQGNLMSMIGKSITSSLQGVENVYSQHVPYVMTVIEAALKGKLKDKEYPSLTGAQLTG---RPQEMIVYIVGGVTYEEAAKIAELNAASPNFSVVLGGSCVLNSSAFLEDL 1638 MK LLLD T ++VSMVYSQ+QV+EKEVYL+ELLG + + M HLKAAVF+QPT + L RE++ P++ EYH+FF+NVV QD+L +LA D E E++ Q+QEYYAD+ A+NEDFF + S S F RNVN +LS+LLS+K+ P+QIRY +SS+ AR++A++ + I FDFRRQDG +L++LDR+DDP+TPLL+QWTYQAMVHELLGL +NR +LRGAPG+ KELEEVVLS TQDDFF ++R+ANFGDLG AVK L+D+YQ+L+K NENI +IEDMQ+FLER+P F+S+S+NVSKHVAV+SEL+RL D LLD+S++EQE+AC++D++ H++ LL +I +P+++ DK+R+++LY LRYE + +R +K LA+ GV +LLDA++ + G A+R GL+ QG +M+ + K+ +S+ GV+NVY+QH P + +++ L GKLKD +P L A +G RP E+I+++VGG T+EE+ ++AE NAA+ ++LGGSCV NS++FL+++ Sbjct: 1 MKVLLLDQATKKVVSMVYSQTQVLEKEVYLIELLGVRHESMSHLKAAVFVQPTEANYDLLVRELAEPKYKEYHLFFNNVVPQDMLARLARLD-EQELIMQIQEYYADYQAINEDFFHLGIDNSLILSSASRTLESGQVFERNVNGILSVLLSLKKIPSQIRYQSSSELARRLASDVLTNIEKGEPFDFRRQDGVMLMILDRRDDPITPLLTQWTYQAMVHELLGLNNNRVILRGAPGITKELEEVVLSATQDDFFRRHRFANFGDLGVAVKQLLDDYQKLTKKNENINSIEDMQSFLERYPDFRSKSINVSKHVAVISELSRLTDLCQLLDISEVEQEIACNNDRSTHKQDLLGRIRNPKVKMADKVRMSILYILRYESYDD--LREIKQALAEKGVQVASLSLLDAVLEYAGEAKRAPGLFSQGGIMAKLTKTF-NSVGGVQNVYTQHQPVLFHIMQNILNGKLKDSAFPPLLTAGGSGTNFRPTEVIIFMVGGATFEESTRVAEFNAANNGIKIMLGGSCVQNSTSFLKEI 529
BLAST of jgi.p|Trimin1|349360 vs. uniprot
Match: F0XW02_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XW02_AURAN) HSP 1 Score: 554 bits (1427), Expect = 6.530e-190 Identity = 312/558 (55.91%), Postives = 401/558 (71.86%), Query Frame = 1 Query: 1 MNVIAAVKSYVDRIVSDGRLEGMKALLLDSTTTQIVSMVYSQSQVMEKEVYLVELLGAKRDR--MPHLKAAVFIQPTLESVAALCREVSNPRFSEYHVFFSNVVHQDLLQQLASADGEHEVVRQVQEYYADFAALNEDFFTANVRRGPSQPSGSAP------FTRNVNALLSMLLSVKRKPAQIRYAASSQQARKVAAEASSQIAADSIFDFRRQDGPLLLVLDRKDDPVTPLLSQWTYQAMVHELLGLTDNRCVLRGAPGVR-KELEEVVLSCTQDDFFAKNRYANFGDLGAAVKGLMDEYQRLSKLNENIQTIEDMQAFLERFPAFKSQSLNVSKHVAVLSELARLVDERVLLDVSQLEQELACSDDQAGHQRALLEKIASPRIQPGDKLRLAMLYALRYEDNPNFNMRSLKLKLADGGVPPDKSALLDALIGFGGRAQRGLGLYGQG-NLMSMIGKSITSSLQGVENVYSQHVPYVMTVIEAALKGKLKDKEYPSLTGAQ-LTG-RPQEMIVYIVGGVTYEEAAKIAELNAASPNFSVVLGGSCVLNSSAFLEDL 1638 MNV+AAV+SYVD+IV D GMK LLLD TT+ V+MVYSQ+++++++VYLVE L ++ M HLKA VF++PT + A L +EV +FSEYHVFFSNVV D L+ LA AD E+EVVRQVQEYYADF +N + F+ N R+ + F RNVN LLS LLS+K +P+ IRYA +S+ A+ VAAE +SQIAAD IF F R + P ++D PL SQWTYQAMVHELLGL NR L+GAPGV+ K+LEEVVLS T D F+A+N++ANFGDLG AVK L+D+YQR +K+NENI +IEDMQ+F+ER+PAF+S+SLNV+KHVA++ EL+RLVD L+DVSQLEQ++AC+DD++ R +L K+ ++ DKLRLAMLYALRYE LKL L + V PDK ALLDAL+ +GG+ RG GL+ +L++ K + SSL+G+ENVY+QHVP +M ++A KGKL + YP+ T A L G + ++IVYIVGGVTYEEA K+AELNAA+ SVVLGGS V NS FLEDL Sbjct: 5 MNVMAAVRSYVDKIVGDPNCPGMKVLLLDEWTTKTVAMVYSQTEILDRDVYLVERLDQAQNHEVMKHLKACVFVRPTPANFAVLTQEVRRAKFSEYHVFFSNVVPGDALKALAEAD-ENEVVRQVQEYYADFVPVNAELFSLNQRQSLRLSTELRDAFHQDMFARNVNGLLSALLSLKLQPSVIRYAGASRVAKAVAAECASQIAADGIFHFARLESPRF-----EEDAALPLRSQWTYQAMVHELLGLNSNRVKLKGAPGVKDKDLEEVVLSATDDAFYAENKFANFGDLGMAVKDLLDDYQRQTKMNENISSIEDMQSFMERYPAFRSKSLNVTKHVALIGELSRLVDVYKLMDVSQLEQDVACNDDKSAQWREVLAKLNDAAVKAPDKLRLAMLYALRYESAQASTTDRLKLSLEENRVNPDKVALLDALLAYGGKRARGPGLFDSNKSLLAKFSKQVKSSLEGIENVYAQHVPLLMETLDAVAKGKLNAQHYPAATTATPLQGAKHDQVIVYIVGGVTYEEATKVAELNAANAGVSVVLGGSFVHNSGTFLEDL 556
BLAST of jgi.p|Trimin1|349360 vs. uniprot
Match: A0A7S3JXK3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JXK3_9STRA) HSP 1 Score: 540 bits (1390), Expect = 2.410e-184 Identity = 294/560 (52.50%), Postives = 410/560 (73.21%), Query Frame = 1 Query: 1 MNVIAAVKSYVDRIVSDGRLEGMKALLLDSTTTQIVSMVYSQSQVMEKEVYLVELLGA--KRDRMPHLKAAVFIQPTLESVAALCREVSNPRFSEYHVFFSNVVHQDLLQQLASADGEHEVVRQVQEYYADFAALNEDFFTANVR---RGPSQPSGSAPFTR-------NVNALLSMLLSVKRKPAQIRYAASSQQARKVAAEASSQIAADSIFDFRRQDGPLLLVLDRKDDPVTPLLSQWTYQAMVHELLGLTDNRCVLRGAPGVRKELEEVVLSCTQDDFFAKNRYANFGDLGAAVKGLMDEYQRLSKLNENIQTIEDMQAFLERFPAFKSQSLNVSKHVAVLSELARLVDERVLLDVSQLEQELACSDDQAGHQRALLEKIASPRIQPGDKLRLAMLYALRYEDNPNFNMRSLKLKLADGGVPPDKSALLDALIGFGGRAQRGLGLYG-QGNLMSMIGKSITSSLQGVENVYSQHVPYVMTVIEAALKGKLKDKEYPSLTGAQLTGRPQEMIVYIVGGVTYEEAAKIAELNAA-SPNFSVVLGGSCVLNSSAFLEDL 1638 MNVIAA +SYVDRIVSD GMK LLLD TT+ VS VYSQ+Q++E++V+LVE L + M HLKAAVF++PT ++ LC+E++ P+FSEYHVFF+NV+ ++L++LA AD E E VRQVQE+YAD+ A+NED FT N R R + G TR N++A+LS LLS+K +P+ IRY ASS+ AR +A + S ++ D I+ F+ ++ +LL+LDR DDPVTPLLSQWTYQAMVHELLGL +NR + K++EEVVLSCTQD FFAK+RY+NFGDLG AVK L+DEYQ + +NE I TIEDMQ F++R+PAF+SQSLNVSKHV+++SEL RLVD L++VSQLEQ++AC++D+ R++LEK+A+P+I+ DKLR+A+LY LRYED+ N + LK L D +PP+K L+DA++ + G+ RG GL+G ++++ + S+ +SL+GVENVY+QHVP + +I+ K KLKD +P+++ +P ++IV++VGG TYEEA KIAE+N + + ++LGG+ + NS++FL+DL Sbjct: 1 MNVIAATRSYVDRIVSDSNNPGMKVLLLDDATTKTVSTVYSQTQILERDVFLVERLEQVDSHEAMRHLKAAVFVRPTWGNIELLCKELAAPKFSEYHVFFANVLPNEMLRRLAEAD-ETESVRQVQEFYADYVAVNEDLFTVNQRSSLRLSNDDRGDTVTTRKNEMIERNISAILSALLSLKTQPSSIRYQASSKIARLIATQCSDRMENDGIYQFKNRN-TMLLILDRADDPVTPLLSQWTYQAMVHELLGLNNNRVKIPVHADSNKKVEEVVLSCTQDSFFAKHRYSNFGDLGGAVKQLLDEYQAQTHMNERISTIEDMQQFVQRYPAFRSQSLNVSKHVSLVSELGRLVDICDLMEVSQLEQDIACNEDRTTQWRSVLEKLANPQIKAPDKLRIALLYCLRYEDSVNLDR--LKAALDDAHLPPEKIILIDAILKYAGKRARGPGLFGAHKSVLAKMTHSLKTSLEGVENVYAQHVPLLSDLIDLITKQKLKDNLFPAVSCVS-AAKPAQLIVFMVGGTTYEEATKIAEINTSPTAGIKILLGGTYIHNSTSFLDDL 555
BLAST of jgi.p|Trimin1|349360 vs. uniprot
Match: A0A8J2SE02_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SE02_9STRA) HSP 1 Score: 537 bits (1383), Expect = 3.160e-183 Identity = 300/562 (53.38%), Postives = 405/562 (72.06%), Query Frame = 1 Query: 1 MNVIAAVKSYVDRIVSDGRLEGMKALLLDSTTTQIVSMVYSQSQVMEKEVYLVELLGAKRDRMP--HLKAAVFIQPTLESVAALCREVSNPRFSEYHVFFSNVVHQDLLQQLASADGEHEVVRQVQEYYADFAALNEDFFTANVRRG----PSQPSGSAPFTRNVNALLSMLLSVKRKPAQIRYAASSQQARKVAAEASSQIAADSIFDFRRQ------DGPLLLVLDRKDDPVTPLLSQWTYQAMVHELLGLTDNRCVLRGAPGVRKE--LEEVVLSCTQDDFFAKNRYANFGDLGAAVKGLMDEYQRLSKLNENIQTIEDMQAFLERFPAFKSQSLNVSKHVAVLSELARLVDERVLLDVSQLEQELACSDDQAGHQRALLEKIASPRIQPGDKLRLAMLYALRYEDNPNFNMRSLKLKLADGGVPPDKSALLDALIGFGGRAQRGLGLYG-QGNLMSMIGKSITSSLQGVENVYSQHVPYVMTVIEAALKGKLKDKEYPSLTGAQLTG-RPQEMIVYIVGGVTYEEAAKIAELNAASPNFSVVLGGSCVLNSSAFLEDL 1638 MNV+AA ++YVDRIVSD GMK LLLD+ TT+ V+ VYSQ+++++++V+LVE L R P HLKAA F++PT + A L RE+++PRF EYH++F+NV + L++LA +D + EVVRQVQE+YADF +N+ FT N R+ ++P+ RNV+ +LS LL++K +PA IRY+++S A+ +A E +AAD IF F+R+ GPLLL+LDR DD VTPLLSQWTYQAMVHELLG+ +NR L+G R + L+EVVLS D F+A++++ANFGDLG AVK L+D+YQR +KLNENI++I+DMQ+FLER+PAF+S+SLNVSKHVA++SEL+RLV+ L+DVSQLEQELAC DD A +R +L +I RI DKLRLA+LYALRYE N + LKL LA+ V PD+ +L+DAL+ +GGR+ R GL+G +L++ K + SSL+G+ENVY+QHVP ++ ++ K +L + YP +TGA + RP E++VYI GG TYEEA K+AELNA S VVLGGS V NS FLEDL Sbjct: 1 MNVLAATRAYVDRIVSDPNNPGMKVLLLDAETTKTVANVYSQTEILDRDVFLVERLDQARGHEPMRHLKAAAFVRPTAANFALLRRELADPRFGEYHLYFANVAPRAQLRELAESD-DLEVVRQVQEFYADFVPVNDALFTLNQRQALRLNTTRPTADL-LRRNVDGVLSSLLALKVQPATIRYSSASTVAKAIATEVQRAVAADGIFHFKRRATASDTGGPLLLILDRADDCVTPLLSQWTYQAMVHELLGVNNNRVRLKGTASARGDPNLDEVVLSAAADPFYAQHQHANFGDLGTAVKQLLDDYQRQTKLNENIKSIDDMQSFLERYPAFRSKSLNVSKHVALISELSRLVETHSLMDVSQLEQELACHDDGASQRREVLARIGDGRIGGEDKLRLALLYALRYEQTGN--VEGLKLALAEHRVAPDRVSLVDALLRYGGRSARTAGLFGGDTSLLAKFSKQVKSSLEGIENVYAQHVPLLLETLDLVSKNRLPEARYPCVTGAPVQALRPAEVVVYIAGGATYEEATKVAELNA-SGGIQVVLGGSYVHNSGTFLEDL 557
BLAST of jgi.p|Trimin1|349360 vs. uniprot
Match: A0A7S2N3U2_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N3U2_9STRA) HSP 1 Score: 532 bits (1370), Expect = 6.320e-181 Identity = 301/589 (51.10%), Postives = 406/589 (68.93%), Query Frame = 1 Query: 1 MNVIAAVKSYVDRIVS-DGRLEGMKALLLDSTTTQIVSMVYSQSQVMEKEVYLVELL---------------GAK-------RDRMPHLKAAVFIQPTLESVAALCREVSNPRFSEYHVFFSNVVHQDLLQQLASADGEHEVVRQVQEYYADFAALNEDFFTANVRR--GPSQPSGSA-------PFTRNVNALLSMLLSVKRKPAQIRYAASSQQARKVAAEASSQIAADSIFDFRRQDGP------LLLVLDRKDDPVTPLLSQWTYQAMVHELLGLTDNRCVLRGAPGVRKELEEVVLSCTQDDFFAKNRYANFGDLGAAVKGLMDEYQRLSKLNE--NIQTIEDMQAFLERFPAFKSQSLNVSKHVAVLSELARLVDERVLLDVSQLEQELACSDDQAGHQRALLEKIASPRIQPGDKLRLAMLYALRYEDNPNFNMRSLKLKLADGGVPPDKSALLDALIGFGGRAQRGLGLYGQGN--LMSMIGKSITSSLQGVENVYSQHVPYVMTVIEAALKGKLKDKEYPSLTGAQLTGRPQEMIVYIVGGVTYEEAAKIAELNAASPN-FSVVLGGSCVLNSSAFLEDL 1638 M+ +AA++SYVDR+V+ DGR GMK LLLD++TTQ VS VYSQ++++ +EVYLV + G K + HLKA F++PT + + +E++NPRF+EYH+FFS +V LL+ +A DG E+VRQVQE+Y DF +NED T N R + +G+A + RN+ + SMLL+++R+PA+IRY ASS A ++A + + IAAD IF FRR G LLLVLDR DDPVTPLLSQWTYQAMVHELLGL +NR VLRGAP + ++LEEVVLS QD+FF KNR+ANFG+LG ++K L+D+YQ+ ++ + N+ TIEDMQ F+E+FP +SQS NVSKHVA++ ELARLVD L+DVSQ EQELAC+DD H R LL+K++SP ++ DKLRL +LYALRYE N N M +K ++ GGVPP+ +D ++ + G RG GLYG G+ L+S + KSI +S+QGV NVYSQHVP +M I++A++GKL K +P + G+ PQE+IV++ GGVTYEEA KI+E N ++P V+LGGS V NS++FLE+L Sbjct: 1 MDGVAAIRSYVDRLVTGDGRCRGMKVLLLDASTTQTVSCVYSQTEILSREVYLVSRIDDGGQNPNIERHDDKGGKPRSEQKDHHQTSHLKAVCFLRPTEINAGLIVKELANPRFAEYHLFFSGIVPSGLLRLIAENDG-RELVRQVQEFYGDFLPVNEDCLTLNCRNTVAMTMSAGTAWARDHAHLYQRNLEGVQSMLLALRRQPARIRYQASSALAGQLARDVADSIAADQIFHFRRGKGGDGYGNLLLLVLDRLDDPVTPLLSQWTYQAMVHELLGLNNNRVVLRGAPNIARDLEEVVLSAQQDEFFRKNRHANFGELGESIKKLLDDYQKQTRTHNVSNLNTIEDMQNFMEKFPELRSQSHNVSKHVAIMGELARLVDVCSLMDVSQFEQELACADDHGAHVRELLDKLSSPSVKIPDKLRLGLLYALRYEKNGNVPM--IKSEMEKGGVPPESIEFVDTILKYAGSKSRGPGLYGVGSKDLVSKMTKSILTSVQGVSNVYSQHVPVLMDTIQSAVRGKLHPKSHPYVLGSSDGPAPQEIIVFMAGGVTYEEATKISEYNNSNPGKVRVILGGSTVHNSTSFLEEL 586
BLAST of jgi.p|Trimin1|349360 vs. uniprot
Match: A0A7R9YAD2_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YAD2_9STRA) HSP 1 Score: 530 bits (1366), Expect = 1.030e-180 Identity = 290/557 (52.06%), Postives = 394/557 (70.74%), Query Frame = 1 Query: 4 NVIAAVKSYVDRIVSDGRLEGMKALLLDSTTTQIVSMVYSQSQVMEKEVYLVELLGAKRDRMPHLKAAVFIQPTLESVAALCREVSNPRFSEYHVFFSNVVHQDLLQQLASADGEHEVVRQVQEYYADFAALNEDFFTANVRR--GPSQPSGSA---PFTRNVNALLSMLLSVKRKPAQIRYAASSQQARKVAAEASSQIAADSIFDFR----RQDGPLLLVLDRKDDPVTPLLSQWTYQAMVHELLGLTDNRCVLRGAPGVRKELEEVVLSCTQDDFFAKNRYANFGDLGAAVKGLMDEYQRLSKLNENIQTIEDMQAFLERFPAFKSQSLNVSKHVAVLSELARLVDERVLLDVSQLEQELACSDDQAGHQRALLEKIASPRIQPGDKLRLAMLYALRYEDNPNFNMRSLKLKLADGGVPPDKSALLDALIGFGGRAQRGLG---LYGQGNLMSMIGKSITSSLQGVENVYSQHVPYVMTVIEAALKGKLKDKEYPSLTGAQLTGRPQEMIVYIVGGVTYEEAAKIAELNAASPNFSVVLGGSCVLNSSAFLEDL 1638 ++I A+ YVD+IV+D R+ GMK L+LD T ++ SMVYSQSQ++EK+VYLVE LGA + M HLKAAVF+QPT ++ L RE++ P+++EYH+FFSN+V D LQ LA AD EH+++RQV EYY DF A+NED F+ + G S+ + F R V+ +LS+LLS+KRKP+QIRYAA S AR+VA E S I AD +FDFR R +GPLLL+LDRKDDPVTPLLSQWTYQAMVHE+LGLT NR VL+ APGV+ EL EVVLS TQD FF +R+AN+GDL AVK L++E+Q KLNE+I++IEDMQ FL+R+PAFK+QS V KH+A+L+EL+R ++ LL+ S+LEQ LAC++D + H LL K+ P I G KLRL MLYALRY+ N N+ ++K +L D G+ D+ A++DAL+ + G +RG L+G ++ + +S L VENV +QH P + T++E+ KGK+KD+ +PS+ GA + +IVY++GG TYEEA +A +N A LGG+ V NS +FL+++ Sbjct: 6 SLIDAIGGYVDKIVTDERIGGMKVLVLDDVTKRVCSMVYSQSQILEKQVYLVEQLGAAHESMSHLKAAVFVQPTPYNIELLKRELAEPKYAEYHIFFSNIVKGDALQSLARAD-EHDLIRQVHEYYGDFEAINEDLFSLAMPDSIGLSRADNAIRPESFARTVSGVLSVLLSLKRKPSQIRYAAGSTVARQVANEVSMAIDADDVFDFRSMGRRVEGPLLLILDRKDDPVTPLLSQWTYQAMVHEILGLTHNRVVLKDAPGVKPELHEVVLSPTQDQFFRDHRHANYGDLAIAVKSLLEEFQAQRKLNEDIRSIEDMQRFLDRYPAFKAQSHTVEKHMAILTELSRKMETLRLLECSELEQMLACNNDHSLHLNMLLGKLDDPLIPKGQKLRLGMLYALRYQ--ANGNLAAVKARLEDAGIGHDQIAVIDALLNYAGANRRGPAADDLFGPRGMLGRMTRSFVQGLADVENVLTQHEPLLHTILESVAKGKIKDQSFPSM-GASSGIKHNSVIVYVIGGATYEEAKVVANMNKAMGQTFYYLGGTTVHNSKSFLKEV 558
BLAST of jgi.p|Trimin1|349360 vs. uniprot
Match: A0A7S2C6S3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C6S3_9STRA) HSP 1 Score: 521 bits (1342), Expect = 4.300e-178 Identity = 270/490 (55.10%), Postives = 366/490 (74.69%), Query Frame = 1 Query: 187 MPHLKAAVFIQPTLESVAALCREVSNPRFSEYHVFFSNVVHQDLLQQLASADGEHEVVRQVQEYYADFAALNEDFFTANVRRGP--SQPSGS----APFTRNVNALLSMLLSVKRKPAQIRYAASSQQARKVAAEASSQIAADSIFDFRRQDGPLLLVLDRKDDPVTPLLSQWTYQAMVHELLGLTDNRCVLRGAPGVRKELEEVVLSCTQDDFFAKNRYANFGDLGAAVKGLMDEYQRLSKLNENIQTIEDMQAFLERFPAFKSQSLNVSKHVAVLSELARLVDERVLLDVSQLEQELACSDDQAGHQRALLEKIASPRIQPGDKLRLAMLYALRYEDNPNFNMRSLKLKLADGGVPPDKSALLDALIGFGGRAQRGLGLYGQGNLMSMIGKSITSSLQGVENVYSQHVPYVMTVIEAALKGKLKDKEYPSLTGAQLTGRPQEMIVYIVGGVTYEEAAKIAELNAASPNFSVVLGGSCVLNSSAFLEDL 1638 MPHLKAAVF++PT E+VA L RE ++P+F EYH+FFSN++ DLLQ LA +D EHEVV+QVQE+Y DF A+NED F+ N+ S PSG+ A F R LLS+LLS+K +P+QIRY SQ A+++A E +I D IF F RQ+GP+LL+LDRK DPVTPLLSQWTYQAMVHELLGL +NR VL+GAPGV K++EEVVLS TQD FFA+ R+ANFGDL ++K L+D++Q+ KLNENI ++EDMQ+F+ER+PAF+SQS NVSKHVA++SEL+RLV+ L+DVSQLEQ+LAC+D+ + + L+ I + ++ DKLRLA+LY+LRYE+ N LK +L DGGV K +LD ++ + G+ QR GLYG + MS + K++ + L GVENVY+QH P +M ++AA+KGKL++ YP++ G +P+ ++V+IVGG TYEE K+AELNA++P ++LGG+ + NS +FLE+L Sbjct: 6 MPHLKAAVFVRPTAENVAILSREFADPQFKEYHLFFSNIISLDLLQALAESD-EHEVVKQVQEFYGDFIAVNEDLFSLNMGDSLRLSAPSGAFDTTAIFDRTAQGLLSVLLSMKVEPSQIRYQGGSQMAQRLAVEVDKRIQGDGIFHFTRQEGPMLLILDRKCDPVTPLLSQWTYQAMVHELLGLNNNRVVLKGAPGVSKDMEEVVLSSTQDTFFAQQRHANFGDLAGSIKELLDDFQKNKKLNENISSVEDMQSFMERYPAFRSQSHNVSKHVALMSELSRLVNHCSLMDVSQLEQDLACNDEHSAQFKELMNSIRAEHVKSADKLRLAILYSLRYEETANI--AQLKRELIDGGVQQHKVDILDVVLRYAGKTQRAPGLYGDRSFMSRMAKNLQTGLNGVENVYTQHQPLMMGTLDAAIKGKLRESAYPAI-GPIPGAQPRSIVVFIVGGATYEEGTKVAELNASNPGVQILLGGNTIHNSVSFLEEL 491 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349360 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_5618 ID=mRNA_5618|Name=jgi.p|Trimin1|349360|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1735bp|location=Sequence derived from alignment at Contig_42:164601..168066- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGAATGTCATCGCAGCAGTCAAGTCTTATGTCGACCGCATCGTCTCCGAback to top protein sequence of jgi.p|Trimin1|349360 >Trimin1|349360|estExt_Genemark1.C_Ctg_420022 ID=Trimin1|349360|estExt_Genemark1.C_Ctg_420022|Name=jgi.p|Trimin1|349360|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=563bp MNVIAAVKSYVDRIVSDGRLEGMKALLLDSTTTQIVSMVYSQSQVMEKEVback to top mRNA from alignment at Contig_42:164601..168066- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_5618 ID=mRNA_5618|Name=jgi.p|Trimin1|349360|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3466bp|location=Sequence derived from alignment at Contig_42:164601..168066- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_42:164601..168066- >mRNA_5618 ID=mRNA_5618|Name=jgi.p|Trimin1|349360|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1689bp|location=Sequence derived from alignment at Contig_42:164601..168066- (Tribonema minus UTEX_B_3156 )back to top |