mRNA_5621 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|166201
Unique NamemRNA_5621
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|166201 vs. uniprot
Match: A0A835YWF8_9STRA (Lipase_3 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWF8_9STRA)

HSP 1 Score: 335 bits (860), Expect = 1.100e-116
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 1 
Query:    1 MACLAAYDIASNFALPDELSLYTFGAPRVGNAAFARRLDARVRQHFRVVNDGDLIAGLPQFLGTYRHAGCKVVTDSEKFGTFIVEPTIVENTFGIKASTLITVHPLREYRECLEACLGDEDLQEYMAKGYAMAHAVDSCQPLTPPRVLPDWLKERRKRSLQEP 489
            MACLAAYDIASNFALPDELSLYTFGAPRVGNAAFARRLDARVRQHFRVVNDGDLIAGLPQFLGTYRHAGCKVVTDSEKFGTFIVEPTIVENTFGIKASTLITVHPLREYRECLEACLGDEDLQEYMAKGYAMAHAVDSCQPLTPPRVLPDWLKERRKRSLQEP
Sbjct:    1 MACLAAYDIASNFALPDELSLYTFGAPRVGNAAFARRLDARVRQHFRVVNDGDLIAGLPQFLGTYRHAGCKVVTDSEKFGTFIVEPTIVENTFGIKASTLITVHPLREYRECLEACLGDEDLQEYMAKGYAMAHAVDSCQPLTPPRVLPDWLKERRKRSLQEP 163
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BLAST of jgi.p|Trimin1|166201 vs. uniprot
Match: D7G482_ECTSI (Lipase domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G482_ECTSI)

HSP 1 Score: 195 bits (495), Expect = 1.290e-54
Identity = 92/162 (56.79%), Postives = 118/162 (72.84%), Query Frame = 1 
Query:    1 MACLAAYDIASNFALPDELSLYTFGAPRVGNAAFARRLDARVRQHFRVVNDGDLIAGLPQFLGTYRHAGCKVVTDSEKFGTFIVEPTIVENTFGIKASTLITVHPLREYRECLEACLGDEDLQEYMAKGYAMAHAVDSCQPLTPPRVLPDWLKERRKRSLQE 486
            +A LAAYDI  NF LPD  +LYTFG+PRVGN  FAR+LD+RV+ HFR+VNDGDLI  LP+F GTY+HAGCKVV DSE++G FIV PT+VE TFG K    +T H L +YRECLEAC+ + DL++Y ++G      VD       P ++P+WLK RR+R  ++
Sbjct: 1255 LASLAAYDIDKNFTLPDPTTLYTFGSPRVGNGVFARKLDSRVKHHFRLVNDGDLITALPRFFGTYKHAGCKVVVDSERYGNFIVAPTLVEQTFGAKPLASLTPHLLNQYRECLEACMEEADLEDYFSRGIG----VD-------PTLVPEWLKGRRRRRKED 1405
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BLAST of jgi.p|Trimin1|166201 vs. uniprot
Match: A0A7S2H3L5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H3L5_9STRA)

HSP 1 Score: 111 bits (277), Expect = 3.510e-26
Identity = 58/124 (46.77%), Postives = 76/124 (61.29%), Query Frame = 1 
Query:    1 MACLAAYDIASNFALPDELSLYTFGAPRVGNAAFARRLDARVRQHFRVVNDGDLIAGLPQFLGTYRHAGCKVVTDSEKFGTFIVEPTIVENTFGIKASTLITVHPLREYRECLEACLGDEDLQE 372
            +A LAA D+A++  LPD +++YTFGAP VGN A A   +  V  HFRVV DGD I   P+  G Y+H+G +V+ D++  G  IV+P  +E          I  H LR YR+CLEACL DED  E
Sbjct:  176 LAVLAARDLATSLDLPDPITVYTFGAPCVGNLALALETNNLVPHHFRVVVDGDSITHPPRPFGPYQHSGRQVLVDADCLGNVIVDPVTIETLGRRPTKASIHCHKLRTYRDCLEACLDDEDQLE 299
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BLAST of jgi.p|Trimin1|166201 vs. uniprot
Match: A0A6H5KLM1_9PHAE (Lipase_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLM1_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 2.350e-24
Identity = 48/69 (69.57%), Postives = 58/69 (84.06%), Query Frame = 1 
Query:    1 MACLAAYDIASNFALPDELSLYTFGAPRVGNAAFARRLDARVRQHFRVVNDGDLIAGLPQFLGTYRHAG 207
            +A LAAYDI  NF LPD ++LYTFG+PRVGN  FAR+LD+RV+ HFR+VNDGDLI  LP+F GTY+HAG
Sbjct: 1241 LASLAAYDIDKNFTLPDPMTLYTFGSPRVGNGVFARKLDSRVKHHFRLVNDGDLITALPRFFGTYKHAG 1309
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BLAST of jgi.p|Trimin1|166201 vs. uniprot
Match: A0A1V9ZIX8_9STRA (Lipase_3 domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZIX8_9STRA)

HSP 1 Score: 105 bits (262), Expect = 2.650e-23
Identity = 52/117 (44.44%), Postives = 72/117 (61.54%), Query Frame = 1 
Query:    1 MACLAAYDIASNFALPDELSLYTFGAPRVGNAAFARRLDARVRQHFRVVNDGDLIAGLPQFLGTYRHAGCKVVTDSEKFGTFIVEPTIVENTFGIKASTLITVHPLREYRECLEACL 351
            +A LAAYD+A++F++P  + +Y FG PRVGN AF R+ D RV   FRVV DGDL+AG+P+F G Y H G +V  D    G  +V+P+ +E    + + T +  H    YR  L  CL
Sbjct:  717 LAVLAAYDVATHFSVP--VHMYNFGGPRVGNPAFVRQYDRRVPDSFRVVFDGDLVAGIPRFWGLYEHVGSEVAIDGA--GNVLVDPSFIERRLLVSSKTKVASHATLVYRTALRTCL 829
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BLAST of jgi.p|Trimin1|166201 vs. uniprot
Match: A0A6G0WXM8_9STRA (Lipase_3 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WXM8_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 2.730e-21
Identity = 50/122 (40.98%), Postives = 74/122 (60.66%), Query Frame = 1 
Query:    1 MACLAAYDIASNFALPDELSLYTFGAPRVGNAAFARRLDARVRQHFRVVNDGDLIAGLPQFLGTYRHAGCKVVTDSEKFGTFIVEPTIVENTFGIKASTLITVHPLREYRECLEACLGDEDL 366
            +A LAAYD A +F +  ++++Y FG PRVGN AF R+ +  V   +RVV DGDL+AG+P+F G Y+H G +V  D  + G  IV+P+ +E     +  T + VH +  YR  L  C  + +L
Sbjct:  699 LAILAAYDCAVHFNI--DVNMYNFGGPRVGNPAFVRQYNRAVPNSYRVVLDGDLVAGIPKFWGLYQHVGTEVAID--EMGNLIVDPSFIERRLQQRTKTRVAVHGMMMYRSMLRKCFDNLEL 816
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BLAST of jgi.p|Trimin1|166201 vs. uniprot
Match: T0R3G9_SAPDV (Lipase_3 domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0R3G9_SAPDV)

HSP 1 Score: 99.4 bits (246), Expect = 3.720e-21
Identity = 50/117 (42.74%), Postives = 70/117 (59.83%), Query Frame = 1 
Query:    1 MACLAAYDIASNFALPDELSLYTFGAPRVGNAAFARRLDARVRQHFRVVNDGDLIAGLPQFLGTYRHAGCKVVTDSEKFGTFIVEPTIVENTFGIKASTLITVHPLREYRECLEACL 351
            +A LAAYDIA++F     +S+Y FG PRVGN AF R+ +  V + FRVV DGDL+AG+P+F G Y H G +V  D    G  +++P+ +E    + + T +  H    YR  L  CL
Sbjct:  708 LAVLAAYDIAAHFGAT-RVSMYNFGGPRVGNPAFVRQYNRTVPESFRVVYDGDLVAGIPRFWGLYEHVGREVAIDGA--GNVLLDPSFIERRLLVSSKTKVASHATLVYRNALRLCL 821
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BLAST of jgi.p|Trimin1|166201 vs. uniprot
Match: A0A8K1CK27_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CK27_PYTOL)

HSP 1 Score: 97.8 bits (242), Expect = 1.300e-20
Identity = 47/117 (40.17%), Postives = 70/117 (59.83%), Query Frame = 1 
Query:    1 MACLAAYDIASNFALPDELSLYTFGAPRVGNAAFARRLDARVRQHFRVVNDGDLIAGLPQFLGTYRHAGCKVVTDSEKFGTFIVEPTIVENTFGIKASTLITVHPLREYRECLEACL 351
            +A LAAYD+A N ++  ++++Y FG PRVGN +F R  D  V   +R+V DGD++ G+P F G Y+HAG ++  D E  G  IV+P+ VE    + +   +  HP   YR  +  CL
Sbjct:  791 LAILAAYDLAVNLSM--KVNMYNFGGPRVGNPSFVRLYDKCVPTSYRIVMDGDIVPGVPDFWGLYQHAGTEISIDLE--GNLIVDPSFVEKKLHVSSKRQVATHPTHVYRSSMAKCL 903
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BLAST of jgi.p|Trimin1|166201 vs. uniprot
Match: A0A448ZD21_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZD21_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 1.820e-20
Identity = 50/115 (43.48%), Postives = 67/115 (58.26%), Query Frame = 1 
Query:   43 LPDELSLYTFGAPRVGNAAFARRLDARVRQHFRVVNDGDLIAGLPQFL---GTYRHAGCKVVTDSEKFGTFIVEPTIVENTFGI-KASTLITVHPLREYRECLEACLGDEDLQEY 375
            L   + +YT+G PRVGN AF+R    RV   FRVVN+GD I  +P +L   G Y+HAG +V+ D+   G  +V PT+VE  F   K  T +  H ++ YRECLE      +L EY
Sbjct: 1022 LQPAVGVYTYGQPRVGNKAFSRLYKQRVPHSFRVVNEGDAITTIPNYLWCGGLYKHAGLEVILDAGMTGNVLVGPTVVETLFRFHKVRTNVMAHQMQRYRECLECIFDPSELLEY 1136
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BLAST of jgi.p|Trimin1|166201 vs. uniprot
Match: A0A1W0A2H2_9STRA (Lipase_3 domain-containing protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A2H2_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 6.020e-20
Identity = 49/117 (41.88%), Postives = 69/117 (58.97%), Query Frame = 1 
Query:    1 MACLAAYDIASNFALPDELSLYTFGAPRVGNAAFARRLDARVRQHFRVVNDGDLIAGLPQFLGTYRHAGCKVVTDSEKFGTFIVEPTIVENTFGIKASTLITVHPLREYRECLEACL 351
            +A  AAYD A +F +P+ + +Y FG PRVGN AF R+ + +V   FR+V DGDL+AG+P+F G Y H G +V  D    G  IV+P+ VE    + + T +  H    YR  L  C+
Sbjct:  714 LAICAAYDCAVHFNIPN-IHMYNFGGPRVGNPAFVRQYNNKVPNSFRIVFDGDLVAGIPRFWGLYEHVGSEVAIDDA--GNVIVDPSFVERRLLVSSKTKVASHATLVYRTGLRNCM 827
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|166201 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YWF8_9STRA1.100e-116100.00Lipase_3 domain-containing protein n=1 Tax=Tribone... [more]
D7G482_ECTSI1.290e-5456.79Lipase domain protein n=1 Tax=Ectocarpus siliculos... [more]
A0A7S2H3L5_9STRA3.510e-2646.77Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6H5KLM1_9PHAE2.350e-2469.57Lipase_3 domain-containing protein n=1 Tax=Ectocar... [more]
A0A1V9ZIX8_9STRA2.650e-2344.44Lipase_3 domain-containing protein n=1 Tax=Achlya ... [more]
A0A6G0WXM8_9STRA2.730e-2140.98Lipase_3 domain-containing protein n=1 Tax=Aphanom... [more]
T0R3G9_SAPDV3.720e-2142.74Lipase_3 domain-containing protein n=2 Tax=Saprole... [more]
A0A8K1CK27_PYTOL1.300e-2040.17Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A448ZD21_9STRA1.820e-2043.48Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A1W0A2H2_9STRA6.020e-2041.88Lipase_3 domain-containing protein (Fragment) n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_42contigContig_42:174038..176847 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|166201|e_gw1.42.235.1
Descriptionphospholipase A1 activity
COG categoryG
Max annot lvl2759|Eukaryota
EggNOG OGsKOG4569@1|root,KOG4569@2759|Eukaryota
Evalue2.12e-55
Seed ortholog2880.D7G482
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionLipase domain protein
Ec32 orthologEc-02_001660.1
TranscriptId166523
TrackFilteredModels1
ProteinId166201
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|166201gene_5621Tribonema minus UTEX_B_3156 geneContig_42 174038..176847 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|166201Trimin1|166201|e_gw1.42.235.1Tribonema minus UTEX_B_3156 polypeptideContig_42 174038..176847 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_5621_3exon_5621_3Tribonema minus UTEX_B_3156 exonContig_42 174038..174187 -
exon_5621_2exon_5621_2Tribonema minus UTEX_B_3156 exonContig_42 175077..175148 -
exon_5621_1exon_5621_1Tribonema minus UTEX_B_3156 exonContig_42 176578..176847 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_5621CDS_5621Tribonema minus UTEX_B_3156 CDSContig_42 176578..176847 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_5621 ID=mRNA_5621|Name=jgi.p|Trimin1|166201|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=492bp|location=Sequence derived from alignment at Contig_42:174038..176847- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGTGCCTTGCAGCGTACGACATCGCCTCAAACTTTGCGCTCCCCGA
CGAGCTGAGCCTGTACACTTTCGGCGCGCCGCGCGTCGGCAACGCAGCGT
TTGCGCGCCGTCTGGACGCACGCGTGCGGCAGCACTTCCGCGTCGTCAAC
GACGGCGACCTCATTGCGGGCCTGCCGCAGTTCCTGGGGACGTACCGCCA
CGCCGGCTGCAAGGTGGTCACGGATAGTGAGAAGTTTGGCACGTTCATCG
TGGAGCCCACGATCGTGGAGAACACGTTTGGCATCAAGGCCAGCACTCTA
ATCACTGTACACCCGCTGAGGGAGTACCGCGAATGCCTGGAGGCCTGTCT
GGGCGACGAGGACCTGCAAGAGTACATGGCAAAGGGGTATGCCATGGCGC
ATGCGGTCGACTCGTGCCAGCCGCTAACGCCGCCACGAGTCCTTCCCGAC
TGGCTCAAGGAGAGGCGAAAGCGCTCCTTGCAAGAGCCGTGA
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protein sequence of jgi.p|Trimin1|166201

>Trimin1|166201|e_gw1.42.235.1 ID=Trimin1|166201|e_gw1.42.235.1|Name=jgi.p|Trimin1|166201|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=164bp
MACLAAYDIASNFALPDELSLYTFGAPRVGNAAFARRLDARVRQHFRVVN
DGDLIAGLPQFLGTYRHAGCKVVTDSEKFGTFIVEPTIVENTFGIKASTL
ITVHPLREYRECLEACLGDEDLQEYMAKGYAMAHAVDSCQPLTPPRVLPD
WLKERRKRSLQEP*
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mRNA from alignment at Contig_42:174038..176847-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_5621 ID=mRNA_5621|Name=jgi.p|Trimin1|166201|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2810bp|location=Sequence derived from alignment at Contig_42:174038..176847- (Tribonema minus UTEX_B_3156 )
ATGGCGTGCCTTGCAGCGTACGACATCGCCTCAAACTTTGCGCTCCCCGA
CGAGCTGAGCCTGTACACTTTCGGCGCGCCGCGCGTCGGCAACGCAGCGT
TTGCGCGCCGTCTGGACGCACGCGTGCGGCAGCACTTCCGCGTCGTCAAC
GACGGCGACCTCATTGCGGGCCTGCCGCAGTTCCTGGGGACGTACCGCCA
CGCCGGCTGCAAGGTGGTCACGGATAGTGAGAAGTTTGGCACGTTCATCG
TGGAGCCCACGATCGTGGAGGTGCGTCTGACGGCTGAGTCGTGTTAAGCT
GCGCGCTTGTGGGTCTGGTACGGCCTTGGACGCGAGTTCAATTCCTACGA
GAAGCGCAATGTGAACAGTACAAAACAACTACTGTAGCTTCACTGAGCTG
CTTCAGCAATCTCTAAAAAGAATTGCCTTTATGGGTGCGTGGGAGGTTCG
GGGGCTGAGGTCGTGAGATAGGGGCAGCGGTAGGGGTAGGGTTGAAGTTA
GGAATGGCGACTGCGAGGGTGTGTGAACGCGATAGAGGTACTTCAGAAAA
GTACGCAAGTTGCAGCACATGAAACTGACGCAGAGCCCGTATTAAAGTGA
TCCTGAGCATGGCTAGGGTGGGGGAGGCCGAGGCTCTTACTCGCTTGCTT
AGGGTTAGGGTTAGGGTTAGGGTTAGGTGAGTGACACTGGCACGTCCACC
TGCATCGGGGAACAGCCACTGACGTGTCGCATGCATTGGGCCAGGGTTGC
GGGCTGAGACTGCGTCATAGTGCAACTCATGCAAGCCACTTCAAGTTGAA
CCTATCAAGGATTTGCAAATGCACATGAAGTTTTCACTTCTGCAGCGTCT
GCATTCAGTGAGAACTATGCAAGTTGTTTGGTTGCCGTAGGATCAATGTT
GGCAGCACCAAGCTGTGACCAGAAGCACTGACGTCGGCCATGCTGTCATC
GAGTGCGATGCTAACAGCCGTCATCACTTGAAGTTGCTGAAGTAACTTTC
TTACCTTGTGGCAGGCGCACGCTGTGTCAGCGGTTTGGCTCGTTAATGAC
GCATACTTTTTTAAAACAGTGTTTTGTAGGGATTGAATCAATGATACGCA
AAAGTCACTGCGCTGGTCCGTGCGCATATATTTGATGTCTGAGGCGCACA
TCCCTTTGATGAATGGGTTTCTAGTGTACTCGTGGTTTGCTGTGCTTCTG
CGCTCATGATACCCGTCCTTCGCTTTGCCACCACTGCACAGTCGCACAGT
TGCGAAAGTGCTGCCAACACCTGGCTCATGTCATTGTCACGATTTGCATC
GCTATCGCCTGTGTCGTTTTCAGAGGGGGTACAGCAGACTTCAACTTCCA
GTTGACATGTGATGCTCGCTGCCTGCTACCGTAGTGTGTGTTGTGTATGA
GCTCGGGCGTATGTATGGCTTGTGTACTTTTTATTAATTCTCGCTCAGGG
CGCGAAAAAGCTCAGATGATTGGCATCTAGCTGTAAGGAATCTACATGTC
GTATGACAGTCTGAAAGTTCGCAACGACAGCCACTCAAACGCCACCGCCG
CCAAATGGCATCTCGGGGTCCTCCCCTACGTCCTCCTTGTGTACTTTTCT
GGACACCAGGAGCGTAGCAGCCAAGCCTTAGTCTGTGAATTGCGTCGCAA
GACTGGTGTCACAGTGCTGCTTGCTGCGCGCCCCTCGTCCGCTGTGCAGA
ACACGTTTGGCATCAAGGCCAGCACTCTAATCACTGTACACCCGCTGAGG
GAGTACCGCGAATGCCTGGAGGTGAGTGCCGCTACGGTCTTGTAAACAAT
TGTCTCTTGTCGCACATTGACTGAGCGCACATGTAGCTCTGTCCATCTGT
GTTGTAAGAACCTTAATTACACAACTTCAACCTTTGTGTGATATGTACCC
TGCACGTCACAGTGCTCCAACAGTCAGTCGCAATGGCTGTCGCAGCTTGT
GTAGAATGGTCCCCCAGTGTGTCAAGCCACAGCAACGCCAAGGCTGCAGG
TGGGTGCCCCATTGTGATGCACTGATATTGGACAGTTGATGTTGGGGTGC
ACGACATCACTTCACAGCAGGACCCTCACGCACTGATTAGTTGTCAGGTT
GTGACACATGGCAATTCATAGGCTGGTGCTACTGTAGGCATCGTCCGGTG
CCCATACAACAGTGCTTGGAGACCGCAAATATGCATTGTGGAAAGAGCAC
GTCACTCATTTTGGGCGGCAGAGCACAAGCACGAGCAATGAAGCAGGCCA
GGCCCCCTCATGCACAACTGCATGAAGACATGCTCGGACAGTTCCTCGGA
CAGTTCCTCACAAAATACAGAAGTCTGCGCGAGTGACTCGCTCTGGCCAA
CAATCAAAGTCAAGATTCAGTGGGGGGGGCTACTGAAGCATGTCATGCGT
GTGAGTGCGCTGGCATGGTTCTGCGCCATGCGCAGTGTGCAGCGACCAAC
TAGACCAGCGCGTCTCTATGCTGTCACTCATTGAACACATCTGGTTATGA
TAGAAGCCTTTCGCCGCGCCGCCGCGCTCATTGCACTCAAGGTGATGCGC
GTTGTGCCATTCGATTTGCATACTTCAGTTCTCAGAAGCTTCCTCTGACT
CTGGTTTCCACCAATGAAGGTGCCAACACTGTGGCTTTCATTGTCTGCTG
TGCACTGCAGGCCTGTCTGGGCGACGAGGACCTGCAAGAGTACATGGCAA
AGGGGTATGCCATGGCGCATGCGGTCGACTCGTGCCAGCCGCTAACGCCG
CCACGAGTCCTTCCCGACTGGCTCAAGGAGAGGCGAAAGCGCTCCTTGCA
AGAGCCGTGA
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Coding sequence (CDS) from alignment at Contig_42:174038..176847-

>mRNA_5621 ID=mRNA_5621|Name=jgi.p|Trimin1|166201|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=492bp|location=Sequence derived from alignment at Contig_42:174038..176847- (Tribonema minus UTEX_B_3156 )
ATGGCGTGCCTTGCAGCGTACGACATCGCCTCAAACTTTGCGCTCCCCGA
CGAGCTGAGCCTGTACACTTTCGGCGCGCCGCGCGTCGGCAACGCAGCGT
TTGCGCGCCGTCTGGACGCACGCGTGCGGCAGCACTTCCGCGTCGTCAAC
GACGGCGACCTCATTGCGGGCCTGCCGCAGTTCCTGGGGACGTACCGCCA
CGCCGGCTGCAAGGTGGTCACGGATAGTGAGAAGTTTGGCACGTTCATCG
TGGAGCCCACGATCGTGGAGAACACGTTTGGCATCAAGGCCAGCACTCTA
ATCACTGTACACCCGCTGAGGGAGTACCGCGAATGCCTGGAGGCCTGTCT
GGGCGACGAGGACCTGCAAGAGTACATGGCAAAGGGGTATGCCATGGCGC
ATGCGGTCGACTCGTGCCAGCCGCTAACGCCGCCACGAGTCCTTCCCGAC
TGGCTCAAGGAGAGGCGAAAGCGCTCCTTGCAAGAGCCGTGA
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