Trimin1|349345|estExt_Genemark1.C_Ctg_410141 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|349345
Unique Name	Trimin1\|349345\|estExt_Genemark1.C_Ctg_410141
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	522

Homology

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BLAST of jgi.p|Trimin1|349345 vs. uniprot
Match: A0A835YSZ0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSZ0_9STRA)

HSP 1 Score: 689 bits (1777), Expect = 1.460e-244
Identity = 521/521 (100.00%), Postives = 521/521 (100.00%), Query Frame = 0

Query:    1 MRTRRSAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVRRRCRDRKGTATAKAAEGEAASRGGAEEAXXXXXXXXXXXXXXXADGAAEGPPLRSPSRTGRDRRRRSRAAPXXXXAPERAEADGEDDVXXXXXXXXXXXXAGDRETAAAPRPRAPRCAHPDGCGRVAKSGGLCRYHGGGPRCVVPGCPSSAEQAADGRPGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGGGRFXXXXXXXXXXXXXXXXXXXXXXXRRTGGPPRXXXXXXXXXXXXSCCRGVEGLEPSHAPHAHPDDGRRMCAFAARYLVQCAPSDEERAALMRRFRFKKLLVMGGEHAFYHALTKEAPELRLTTRVLDASVRAAAGKIKGTGDERPDAFHYIADGESEWAIHLEYDEGVKHEKGEGRLAAVADAAGVDPSRVFVVRVQAHHEEPAKAVCARRTKGSHSYFELTRRGEEVVRETAEAVREILGWIRDGTADSRPDASRRWVINF 521
            MRTRRSAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVRRRCRDRKGTATAKAAEGEAASRGGAEEAXXXXXXXXXXXXXXXADGAAEGPPLRSPSRTGRDRRRRSRAAPXXXXAPERAEADGEDDVXXXXXXXXXXXXAGDRETAAAPRPRAPRCAHPDGCGRVAKSGGLCRYHGGGPRCVVPGCPSSAEQAADGRPGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGGGRFXXXXXXXXXXXXXXXXXXXXXXXRRTGGPPRXXXXXXXXXXXXSCCRGVEGLEPSHAPHAHPDDGRRMCAFAARYLVQCAPSDEERAALMRRFRFKKLLVMGGEHAFYHALTKEAPELRLTTRVLDASVRAAAGKIKGTGDERPDAFHYIADGESEWAIHLEYDEGVKHEKGEGRLAAVADAAGVDPSRVFVVRVQAHHEEPAKAVCARRTKGSHSYFELTRRGEEVVRETAEAVREILGWIRDGTADSRPDASRRWVINF
Sbjct:    1 MRTRRSAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVRRRCRDRKGTATAKAAEGEAASRGGAEEAXXXXXXXXXXXXXXXADGAAEGPPLRSPSRTGRDRRRRSRAAPXXXXAPERAEADGEDDVXXXXXXXXXXXXAGDRETAAAPRPRAPRCAHPDGCGRVAKSGGLCRYHGGGPRCVVPGCPSSAEQAADGRPGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGGGRFXXXXXXXXXXXXXXXXXXXXXXXRRTGGPPRXXXXXXXXXXXXSCCRGVEGLEPSHAPHAHPDDGRRMCAFAARYLVQCAPSDEERAALMRRFRFKKLLVMGGEHAFYHALTKEAPELRLTTRVLDASVRAAAGKIKGTGDERPDAFHYIADGESEWAIHLEYDEGVKHEKGEGRLAAVADAAGVDPSRVFVVRVQAHHEEPAKAVCARRTKGSHSYFELTRRGEEVVRETAEAVREILGWIRDGTADSRPDASRRWVINF 521

[Close]

BLAST of jgi.p|Trimin1|349345 vs. uniprot
Match: A0A835YSZ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSZ3_9STRA)

HSP 1 Score: 583 bits (1502), Expect = 1.980e-193
Identity = 407/461 (88.29%), Postives = 408/461 (88.50%), Query Frame = 0

Query:   57 GEAASRGGAEEAXXXXXXXXXXXXXXXADGAAEGPPLRSPSRTGRDRRRRSRAAPXXXXAPERAEADGEDDVXXXXXXXXXXXXAGDRETAAAPRPRAPRCAHPDGCGRVAKSGGLCRYHGGGPRCVVPGCPSSAEQAADGRPGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGGGRFXXXXXXXXXXXXXXXXXXXXXXXRRTGGPPRXXXXXXXXXXXXSCCRGVEGLEPSHAPHAHPDDGRRMCAFAARYLVQCAPSDEERAALMRRFRFKKLLVMGGEHAFYHALTKEAPELRLTTRVLDASVRAAAGKIKGTGDERPDAFHYIADGESEWAIHLEYDEGVKHEKGEGRLAAVADAAGVDPSRVFVVRVQAHHEEPAKAVCARRTKGSHSYFELTRRGEEVVRETAEAVREILGWIRDGTADSRPDASRRW 517
            GEA SR GAEEA                DGAAEGPPL S  RTGRDR R SRAAP    APERAEADGEDDV            AGDRET AA RPRAPRCAHPDG GRVAKSGGLCRYHGGGPRCVVPGCPSSAEQAADGRPGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGGGRFXXXXXXXXXXXXXXXXXXXXXXXRRTG PPR XXXXXXXXXXXSCCRGVEGLEPSHAPHAHPDDGRRMCA AARYLVQC PSDEER ALMRRFRFKKLLVM GEHAFYHALTKEAPELRLTTRVLDASVRAAAGKIKGTGDERPDAFHYIADGESE AIHLEYDEGVKHEKGEGRLAAVADAAGVDP RVFVVRVQAHH+EPAKAVCARRTKGSHSYFELTRRGEEVV ETAEAVREIL WIRDGTADSRPDASR W
Sbjct:  157 GEAGSREGAEEATERVPDATVGARADGGDGAAEGPPLHSAPRTGRDRGRGSRAAPPAAVAPERAEADGEDDVGDGGDG------AGDRETTAASRPRAPRCAHPDGRGRVAKSGGLCRYHGGGPRCVVPGCPSSAEQAADGRPGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGGGRFXXXXXXXXXXXXXXXXXXXXXXXRRTGAPPRCXXXXXXXXXXXSCCRGVEGLEPSHAPHAHPDDGRRMCALAARYLVQCVPSDEERVALMRRFRFKKLLVMRGEHAFYHALTKEAPELRLTTRVLDASVRAAAGKIKGTGDERPDAFHYIADGESESAIHLEYDEGVKHEKGEGRLAAVADAAGVDPFRVFVVRVQAHHDEPAKAVCARRTKGSHSYFELTRRGEEVVAETAEAVREILSWIRDGTADSRPDASRSW 611

[Close]

BLAST of jgi.p|Trimin1|349345 vs. uniprot
Match: A0A835ZKX4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKX4_9STRA)

HSP 1 Score: 480 bits (1236), Expect = 3.470e-162
Identity = 341/381 (89.50%), Postives = 345/381 (90.55%), Query Frame = 0

Query:  144 RETAAAPRPRAPRCAHPDGC---GRVAKSGGLCRYHGGGPRCVVPGCPSSAEQAADGRPGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGGGRFXXXXXXXXXXXXXXXXXXXXXXXRRTGGPPRXXXXXXXXXXXXSCCRGVEGLEPSHAPHAHPDDGRRMCAFAARYLVQCAPSDEERAALMRRFRFKKLLVMGGEHAFYHALTKEAPELRLTTRVLDASVRAAAGKIKGTGDERPDAFHYIADGESEWAIHLEYDEGVKHEKGEGRLAAVADAAGVDPSRVFVVRVQAHHEEPAKAVCARRTKGSHSYFELTRRGEEVVRETAEAVREILGWIRDGTADSRPDASRRWVINF 521
            RETA  P PRAP           G   ++GG      GGPRCVVPGCPSSAEQAADGRPGR    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGGGRFXXXXXXXXXXXXXXXXXXXXXXXRRTG PPR XXXXXXXXXXXSCCRGVEGLEPSHAPHAHPDDGRRMCAFAARYLVQCAPSDEER ALMRRFRFKKLLVM GEHAFYHALTKEAPELRLTTRVLDASVRAAAGKIKGTGD RPDAF YIADGESEWAIHLEYDEGVKHEKGEGRLA VADAAGVDPSRVFVVRVQAHH+EPAKAVCARRTKGSHSYFELTR+GEEVV ETAEAVREIL WIRDGTADSRPDASRRWVINF
Sbjct:  164 RETARPPPPRAPAXXXXXXXXXXGASPRAGGCAATTAGGPRCVVPGCPSSAEQAADGRPGRCVAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGGGRFXXXXXXXXXXXXXXXXXXXXXXXRRTGAPPRCXXXXXXXXXXXSCCRGVEGLEPSHAPHAHPDDGRRMCAFAARYLVQCAPSDEERVALMRRFRFKKLLVMRGEHAFYHALTKEAPELRLTTRVLDASVRAAAGKIKGTGDGRPDAFQYIADGESEWAIHLEYDEGVKHEKGEGRLADVADAAGVDPSRVFVVRVQAHHDEPAKAVCARRTKGSHSYFELTRQGEEVVAETAEAVREILSWIRDGTADSRPDASRRWVINF 544

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|349345 vs. uniprot

BLAST of jgi.p|Trimin1|349345 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A835YSZ0_9STRA	1.460e-244	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YSZ3_9STRA	1.980e-193	88.29	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZKX4_9STRA	3.470e-162	89.50	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..153
None	No IPR available	PANTHER	PTHR31827	EMB\|CAB89363.1	coord: 70..322

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_41	contig	Contig_41:919964..921529 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|349345	mRNA_4518	Tribonema minus UTEX_B_3156	mRNA	Contig_41 919923..921529 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|349345|estExt_Genemark1.C_Ctg_410141 ID=Trimin1|349345|estExt_Genemark1.C_Ctg_410141|Name=jgi.p|Trimin1|349345|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=522bp
MRTRRSAEAAAEGGEEEGGAPPPDAAEDVAAAAAAAAPVRRRCRDRKGTA
TAKAAEGEAASRGGAEEAPERVPDARADARAEGADGAAEGPPLRSPSRTG
RDRRRRSRAAPPAAAAPERAEADGEDDVGDGGDGGDGGDGAGDRETAAAP
RPRAPRCAHPDGCGRVAKSGGLCRYHGGGPRCVVPGCPSSAEQAADGRPG
RCVAHAGGRRCEVAGCESSAVSGGVGGEALCGRHGGGRRCDVDGCPKAAV
SGGAPGGGRFCRGHGGGLRCSVEGCGKAAQSGGRRTGGPPRCCGHGGGHR
CAMSCCRGVEGLEPSHAPHAHPDDGRRMCAFAARYLVQCAPSDEERAALM
RRFRFKKLLVMGGEHAFYHALTKEAPELRLTTRVLDASVRAAAGKIKGTG
DERPDAFHYIADGESEWAIHLEYDEGVKHEKGEGRLAAVADAAGVDPSRV
FVVRVQAHHEEPAKAVCARRTKGSHSYFELTRRGEEVVRETAEAVREILG
WIRDGTADSRPDASRRWVINF*