Trimin1|349333|estExt_Genemark1.C_Ctg_410076 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|349333
Unique NameTrimin1|349333|estExt_Genemark1.C_Ctg_410076
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length373
Homology
BLAST of jgi.p|Trimin1|349333 vs. uniprot
Match: A0A835YVR8_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVR8_9STRA)

HSP 1 Score: 694 bits (1791), Expect = 1.290e-251
Identity = 372/372 (100.00%), Postives = 372/372 (100.00%), Query Frame = 0
Query:    1 MADFLNNPFVAPSSNLTEICFKIRSQLFAAHGLAGRPTGPTGVREVFRQLDKDGSGTMIKSTFEAALAQAGLYEVNSLMRAFPAPKAVVERISYPAFLQALQLPLNERRRRVVDAAFKSLDTAGKGTVPLESALAVLRSTAVTHPEVISGKLTADQVIEDFKAFFEEKHSGQVTAEAFTEYYQSLGELEPIDAVFVSILGRLWRVREQADMDELVKHLALELGEKIRERAKDNETEAESLHWAFKQVHTMDLPSGKFNKAELVRVLEHFGLYGLLHSFIYQLRDXXXXXXXXXXXXXXXXXXXVDSRIVDAMWKDVKSKFDPSNLDGDNLEVSAFVDEVVPIWEKHAQFGGRCDCGVSPDYLLDEPVGYEHD 372
            MADFLNNPFVAPSSNLTEICFKIRSQLFAAHGLAGRPTGPTGVREVFRQLDKDGSGTMIKSTFEAALAQAGLYEVNSLMRAFPAPKAVVERISYPAFLQALQLPLNERRRRVVDAAFKSLDTAGKGTVPLESALAVLRSTAVTHPEVISGKLTADQVIEDFKAFFEEKHSGQVTAEAFTEYYQSLGELEPIDAVFVSILGRLWRVREQADMDELVKHLALELGEKIRERAKDNETEAESLHWAFKQVHTMDLPSGKFNKAELVRVLEHFGLYGLLHSFIYQLRDXXXXXXXXXXXXXXXXXXXVDSRIVDAMWKDVKSKFDPSNLDGDNLEVSAFVDEVVPIWEKHAQFGGRCDCGVSPDYLLDEPVGYEHD
Sbjct:    1 MADFLNNPFVAPSSNLTEICFKIRSQLFAAHGLAGRPTGPTGVREVFRQLDKDGSGTMIKSTFEAALAQAGLYEVNSLMRAFPAPKAVVERISYPAFLQALQLPLNERRRRVVDAAFKSLDTAGKGTVPLESALAVLRSTAVTHPEVISGKLTADQVIEDFKAFFEEKHSGQVTAEAFTEYYQSLGELEPIDAVFVSILGRLWRVREQADMDELVKHLALELGEKIRERAKDNETEAESLHWAFKQVHTMDLPSGKFNKAELVRVLEHFGLYGLLHSFIYQLRDXXXXXXXXXXXXXXXXXXXVDSRIVDAMWKDVKSKFDPSNLDGDNLEVSAFVDEVVPIWEKHAQFGGRCDCGVSPDYLLDEPVGYEHD 372          
BLAST of jgi.p|Trimin1|349333 vs. uniprot
Match: A0A7S2UWW3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWW3_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 7.380e-20
Identity = 74/216 (34.26%), Postives = 103/216 (47.69%), Query Frame = 0
Query:   67 LAQAGLY----EVNSLMRAFPAPKAVVERISYPAFLQALQLPLNERRRRVVDAAFKSLDTAGKGTVPLESALAVLRSTAVTHPEVISGKLTADQVIEDFKAFFEEKHSGQ----VTAEAFTEYYQSLGELEPIDAVFVSILGRLWRVRE--QADMDELVKHLALELGEKIRERAKDNETEAESLHWAFKQVHTMDLPSGKFNKAELVRVLEHFGLY 272
            LA  G++    E+ +L R F         I+Y  FL+ +  PLNERR  +V  AF  +D  G G + +       +     HP+V +GK+  DQV+EDF   FE    G     VT E F++YY  L    P D  FV+++ + W + E   A+MD  +  L   L  KI E+ K NE EA  L   F+     D  SG     E  R LE FG++
Sbjct:    2 LATCGVFLKTPEITTLFRHFDVDGDC--NINYDEFLKGMAPPLNERRLELVRRAFMMMDVDGSGQLTVSDIEG--KFVVDQHPDVATGKIAPDQVLEDFLGSFEGSRQGNADGIVTWEEFSDYYHDLSASIPDDDYFVTVMEQCWMISEAQSAEMDVELDRLEGVLKSKIMEKTKGNEGEASVLRKTFRFFD--DNESGTITMDEFRRALEVFGIF 211          
BLAST of jgi.p|Trimin1|349333 vs. uniprot
Match: CCB23_FAXLI (Crustacean calcium-binding protein 23 n=2 Tax=Cambarinae TaxID=72430 RepID=CCB23_FAXLI)

HSP 1 Score: 95.5 bits (236), Expect = 1.680e-19
Identity = 62/180 (34.44%), Postives = 97/180 (53.89%), Query Frame = 0
Query:   30 AHGLAGRPTGPTGVREVFRQLDKDGSGTMIKSTFEAALAQAGLY----EVNSLMRAFPAPKAVVERISYPAFLQALQLPLNERRRRVVDAAFKSLDTAGKGTVPLESALAVLRSTAVTHPEVISGKLTADQVIEDFKAFFEEKHS--GQVTAEAFTEYYQSLGELEPIDAVFVSILGRLW 203
            +H L+   +G   +  +FR+LDKD S T+ K      + Q GL     ++N L  +F   K     I+Y  FL++L+  + E R++ V+AAFK LD  G G V LE      + +A THP+V+ G+ T D++++ F   FE   S  G+VT + F +YY  L +    D  FVS++  +W
Sbjct:   25 SHCLSQGYSGLLSLGRLFRRLDKDRSWTLSKEELSRGVGQFGLDLSDGDINKLFSSFE--KDGQSGINYEEFLESLRPEMTEPRKKAVEAAFKHLDKTGDGVVGLEDIKG--KYSAKTHPKVVKGEATEDEILKKFLNMFETNTSVDGKVTKKEFFDYYSGLSKAIDEDEYFVSMVNIMW 200          
BLAST of jgi.p|Trimin1|349333 vs. uniprot
Match: A0A078AI59_STYLE (Ef hand family protein n=2 Tax=Oxytrichidae TaxID=57506 RepID=A0A078AI59_STYLE)

HSP 1 Score: 81.3 bits (199), Expect = 1.150e-13
Identity = 57/194 (29.38%), Postives = 101/194 (52.06%), Query Frame = 0
Query:   43 VREVFRQLDKDGSGTMIKSTFEAALAQAGLY----EVNSLMRAFPAPKAVVERISYPAFLQALQLPLNERRRRVVDAAFKSLDTAGKGTVPLESALAVLRSTAVTHPEVISGKLTADQVIEDFKAFFEE---KHSGQVTAEAFTEYYQSLGELEPIDAVFVSILGRLWRVREQADMDELVKHLALELGEKIRER 229
            ++ +F+++D +G+  +  S FE AL   GL+    E+ +LM+ +         ISY  F++ L+  L ERR+++V+ AF+ +D  G G + +   +++   +   +PE I G+ T +Q++ DF   FE       G ++ E F +YY  L    P D  FV ++   W+  E+ D D  VK     L +++R R
Sbjct:   34 LKRIFQRMDYNGNKKLDASEFEQALGAFGLFPKKVELQALMKYYDVDGD--GNISYEEFIRGLRDELTERRKKMVEKAFRMMDRDGSGQLNINDLISIYDVSM--NPEFIEGRKTREQILGDFLNNFEGAKGNRDGIISKEEFFDYYTDLSMSVPSDEYFVRMMESTWQCPEE-DNDGAVKATVQMLLKEVRLR 222          
BLAST of jgi.p|Trimin1|349333 vs. uniprot
Match: A0A7S3FU10_9SPIT (Hypothetical protein n=1 Tax=Strombidium rassoulzadegani TaxID=1082188 RepID=A0A7S3FU10_9SPIT)

HSP 1 Score: 81.3 bits (199), Expect = 3.240e-13
Identity = 56/180 (31.11%), Postives = 90/180 (50.00%), Query Frame = 0
Query:   42 GVREVFRQLDKDGSGTMIKSTFEAALAQAGLY----EVNSLMRAFPAPKAVVERISYPAFLQALQLPLNERRRRVVDAAFKSLDTAGKGTVPLESALAVLRSTAVTHPEVISGKLTADQVIEDFKAFFEEKHSGQ--------VTAEAFTEYYQSLGELEPIDAVFVSILGRLWRVREQA 209
            G++  F+ +D D S  +    F  AL+  GL     E  ++   F    +    I Y  F++A++ P+N  R+++V  A+KSLD  G G V +     V    A  HP+VISGK T DQ++++F   FE  HS +        VT E F EYY ++      D  F+ ++   W++ E++
Sbjct:    3 GLQRTFKIMDDDNSKNLNMYEFCKALSDYGLGFSKGEQQAIFNYFDVDNSGT--IIYDEFIRAVRGPMNMARKKIVAQAYKSLDKDGNGWVDINDVRGVYN--ARKHPDVISGKKTEDQILQEFLETFETAHSMRENGAPDHVVTREEFEEYYNNVSCSIDDDMYFMLMINNAWKLTEES 178          
BLAST of jgi.p|Trimin1|349333 vs. uniprot
Match: B5M6G5_CYRSC (EF-hand protein-like protein n=1 Tax=Cyriopagopus schmidti TaxID=29017 RepID=B5M6G5_CYRSC)

HSP 1 Score: 73.2 bits (178), Expect = 1.290e-11
Identity = 48/173 (27.75%), Postives = 83/173 (47.98%), Query Frame = 0
Query:   35 GRPTGPTGVREVFRQLDKDGSGTMIKSTFEAALAQAGLYEVNSLMRAFPAPKAVVERISYPAFLQALQLPLNERRRRVVDAAFKSLDTAGKGTVPLESALAVLRSTAVTHPEVISGKLTADQVIEDFKAFFEEKHS--GQVTAEAFTEYYQSLGELEPIDAVFVSILGRLWRV 205
            G    P+ V  +F++LD+DGSG+                                  IS+  FL+A++ PL++ R  +++ AF  +D  G G V L+    V    A  HP+VI+GK   D+V+ +F   FE  ++  G+VT + F +YY  +     +D  FV+++ + W++
Sbjct:   51 GADIQPSEVESLFKELDRDGSGS----------------------------------ISFDEFLRAVRPPLSQDRLDMIEKAFAKMDKTGDGVVNLQDLKGVYN--AREHPDVIAGKKNEDKVLVEFLENFETPNNPDGKVTKQEFIDYYTGVSSSIDLDEYFVTMMQKAWQL 187          
BLAST of jgi.p|Trimin1|349333 vs. uniprot
Match: A0A7S1IDI7_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IDI7_9EUGL)

HSP 1 Score: 73.9 bits (180), Expect = 7.600e-11
Identity = 50/187 (26.74%), Postives = 92/187 (49.20%), Query Frame = 0
Query:   23 IRSQLFAAHGLAGRPTGPTGVREVFRQLDKDGSGTMIKSTFEAALAQAGLY----EVNSLMRAFPAPKAVVERISYPAFLQALQLPLNERRRRVVDAAFKSLDTAGKGTVPLESALAVLRSTAVTHPEVISGKLTADQVIEDFKAFFEEKHSGQVTAEAFTEYYQSLGELEPIDAVFVSILGRLWRV 205
            ++++L    G    P     +  VFR +D  G+  + +   ++ +A  G+Y    E+  L   F +  +   +I    FL  L   ++  R+ +  AAF  LD  G GTV ++    VL+     HPEV++G++TA++V  +F A ++    G +T + F EYY+ +  +   D  F  +L + W++
Sbjct:  162 VKAKLMERAGAGSLPA----LARVFRVMDDSGNNKLDRMEMQSGMATFGVYLTADELEVLFDYFDSDNS--GQIHVDEFLSFLVPDMSLGRKNLCQAAFNLLDVNGDGTVTIDEL--VLKFHTDEHPEVLAGRMTAEEVTAEFAAAWDTSGDGIITFDEFCEYYKHMSSMITNDEYFEVMLKKSWQL 340          
BLAST of jgi.p|Trimin1|349333 vs. uniprot
Match: A0A4Y2NB09_ARAVE (Calcyphosin-like protein n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2NB09_ARAVE)

HSP 1 Score: 69.3 bits (168), Expect = 2.850e-10
Identity = 44/165 (26.67%), Postives = 80/165 (48.48%), Query Frame = 0
Query:   43 VREVFRQLDKDGSGTMIKSTFEAALAQAGLYEVNSLMRAFPAPKAVVERISYPAFLQALQLPLNERRRRVVDAAFKSLDTAGKGTVPLESALAVLRSTAVTHPEVISGKLTADQVIEDFKAFFE--EKHSGQVTAEAFTEYYQSLGELEPIDAVFVSILGRLWRV 205
            V E+F++LDKD SGT                                  +S+  FL+A++  L + R  V++ AF  +D  G G+V L+    V   +   HP+V++GK + D+V+ +F + F+   K  G+V+ + F +YY  +     +D  FV+++ + W++
Sbjct:   58 VAELFKELDKDESGT----------------------------------VSFEEFLKAVRPALPQERLDVIEKAFSKMDKTGDGSVTLDDLKGVY--SGKEHPDVVAGKKSEDEVLLEFLSSFDTPNKSDGKVSKQEFIDYYAGVSASIDLDEYFVTMMEKAWQL 186          
BLAST of jgi.p|Trimin1|349333 vs. uniprot
Match: A0A1W7RAM7_9SCOR (EF-hand protein-like protein n=1 Tax=Hadrurus spadix TaxID=141984 RepID=A0A1W7RAM7_9SCOR)

HSP 1 Score: 68.9 bits (167), Expect = 3.970e-10
Identity = 42/163 (25.77%), Postives = 75/163 (46.01%), Query Frame = 0
Query:   45 EVFRQLDKDGSGTMIKSTFEAALAQAGLYEVNSLMRAFPAPKAVVERISYPAFLQALQLPLNERRRRVVDAAFKSLDTAGKGTVPLESALAVLRSTAVTHPEVISGKLTADQVIEDFKAFFEEKHS--GQVTAEAFTEYYQSLGELEPIDAVFVSILGRLWRV 205
            ++FR++DKDGSGT+                                   +  FL+A++ P+++ R  ++D AF  +D  G G + +E    V  +T   HP+ IS ++T D++ E+F   F+  +   G++T E F  YY  +      D  FV ++   W++
Sbjct:   61 QLFREIDKDGSGTL----------------------------------HFDEFLRAIRPPMSKTRLDLIDQAFAKMDKTGDGVITIEDLRGVYNATY--HPKFISTEMTEDEIFEEFLRSFDTPNDPDGKITREDFLNYYAGVSASIDTDEYFVEMMTSAWKL 187          
BLAST of jgi.p|Trimin1|349333 vs. uniprot
Match: A9QQB7_LYCSI (Calcium-dependent protein kinase isoform ak1 n=1 Tax=Lycosa singoriensis TaxID=434756 RepID=A9QQB7_LYCSI)

HSP 1 Score: 67.4 bits (163), Expect = 1.030e-9
Identity = 43/142 (30.28%), Postives = 69/142 (48.59%), Query Frame = 0
Query:   43 VREVFRQLDKDGSGTMIKSTFEAALAQAGLYEVNSLMRAFPAPKAVVERISYPAFLQALQLPLNERRRRVVDAAFKSLDTAGKGTVPLESALAVLRSTAVTHPEVISGKLTADQVIEDFKAFFE--EKHSGQVTAEAFTEYY 182
            V E+F+++DKDGSGT                                  +S   FL+A++ PL++ R  +++ AF  +D  G G+V ++    V   +   HP+VI GK T DQ++E+F   F+   K  G+VT + F +YY
Sbjct:   57 VAELFKEIDKDGSGT----------------------------------VSLEEFLRAVRPPLSQDRLDIIERAFVKMDKTGDGSVTIDDLKGVY--SGKEHPDVIDGKKTEDQILEEFLQSFDTPNKGDGKVTKQEFIDYY 162          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349333 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YVR8_9STRA1.290e-251100.00EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S2UWW3_9STRA7.380e-2034.26Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
CCB23_FAXLI1.680e-1934.44Crustacean calcium-binding protein 23 n=2 Tax=Camb... [more]
A0A078AI59_STYLE1.150e-1329.38Ef hand family protein n=2 Tax=Oxytrichidae TaxID=... [more]
A0A7S3FU10_9SPIT3.240e-1331.11Hypothetical protein n=1 Tax=Strombidium rassoulza... [more]
B5M6G5_CYRSC1.290e-1127.75EF-hand protein-like protein n=1 Tax=Cyriopagopus ... [more]
A0A7S1IDI7_9EUGL7.600e-1126.74Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A4Y2NB09_ARAVE2.850e-1026.67Calcyphosin-like protein n=1 Tax=Araneus ventricos... [more]
A0A1W7RAM7_9SCOR3.970e-1025.77EF-hand protein-like protein n=1 Tax=Hadrurus spad... [more]
A9QQB7_LYCSI1.030e-930.28Calcium-dependent protein kinase isoform ak1 n=1 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 106..206
e-value: 2.9E-18
score: 68.2
NoneNo IPR availablePANTHERPTHR34524CALCYPHOSINcoord: 41..204
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 38..73
score: 9.436442
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 43..188

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_41contigContig_41:678512..688368 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349333mRNA_4461Tribonema minus UTEX_B_3156 mRNAContig_41 678512..688368 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|349333|estExt_Genemark1.C_Ctg_410076 ID=Trimin1|349333|estExt_Genemark1.C_Ctg_410076|Name=jgi.p|Trimin1|349333|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=373bp
MADFLNNPFVAPSSNLTEICFKIRSQLFAAHGLAGRPTGPTGVREVFRQL
DKDGSGTMIKSTFEAALAQAGLYEVNSLMRAFPAPKAVVERISYPAFLQA
LQLPLNERRRRVVDAAFKSLDTAGKGTVPLESALAVLRSTAVTHPEVISG
KLTADQVIEDFKAFFEEKHSGQVTAEAFTEYYQSLGELEPIDAVFVSILG
RLWRVREQADMDELVKHLALELGEKIRERAKDNETEAESLHWAFKQVHTM
DLPSGKFNKAELVRVLEHFGLYGLLHSFIYQLRDGKFNKAELVRVLEHFG
LQGVDSRIVDAMWKDVKSKFDPSNLDGDNLEVSAFVDEVVPIWEKHAQFG
GRCDCGVSPDYLLDEPVGYEHD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair