Trimin1|349310|estExt_Genemark1.C_Ctg_410034 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|349310
Unique NameTrimin1|349310|estExt_Genemark1.C_Ctg_410034
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length510
Homology
BLAST of jgi.p|Trimin1|349310 vs. uniprot
Match: A0A836CCR9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCR9_9STRA)

HSP 1 Score: 751 bits (1940), Expect = 9.670e-270
Identity = 509/509 (100.00%), Postives = 509/509 (100.00%), Query Frame = 0
Query:    1 MNVFHDPAQAEALLSMSLDDISKARKKADTPSASKPKKAAGVANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGNARVRVESLAQTASLAQVLEAFESVGRVTRAEIPTDAGGRSQGYGFVEFLDPDDAVVAARTMSGTIIANRKIIVSMAPQPKGGXXXXXXXXXAADTALVYVGNLANDTEELELKRHMQSAGRVVNVNMVTDAAGRSRGYAIVQFGRPNEXXXXXEARKAIQTLHGSSLLGRKLIVHEDRDTGKGAASQXXXXXXXXXXXXXXXXXXXXXXXXVVPREGLASPRVFVGNLSFDVTWQVLKDHMRQAGDAKHVYIMERDGRSAGCAIVTYGSEAEAERAIVQLHDTELRGRLIYVREDREDSNREGGXXXXRGRARDDGMDNSMIVDTGRDAEARSVIVTNIDRDITWRELKDHFSAVGKVQFVEIPDTDGNPHAIVRYADERSAGAAIARLSRTTLGTRRIIVLGFQ 509
            MNVFHDPAQAEALLSMSLDDISKARKKADTPSASKPKKAAGVANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGNARVRVESLAQTASLAQVLEAFESVGRVTRAEIPTDAGGRSQGYGFVEFLDPDDAVVAARTMSGTIIANRKIIVSMAPQPKGGXXXXXXXXXAADTALVYVGNLANDTEELELKRHMQSAGRVVNVNMVTDAAGRSRGYAIVQFGRPNEXXXXXEARKAIQTLHGSSLLGRKLIVHEDRDTGKGAASQXXXXXXXXXXXXXXXXXXXXXXXXVVPREGLASPRVFVGNLSFDVTWQVLKDHMRQAGDAKHVYIMERDGRSAGCAIVTYGSEAEAERAIVQLHDTELRGRLIYVREDREDSNREGGXXXXRGRARDDGMDNSMIVDTGRDAEARSVIVTNIDRDITWRELKDHFSAVGKVQFVEIPDTDGNPHAIVRYADERSAGAAIARLSRTTLGTRRIIVLGFQ
Sbjct:    1 MNVFHDPAQAEALLSMSLDDISKARKKADTPSASKPKKAAGVANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGNARVRVESLAQTASLAQVLEAFESVGRVTRAEIPTDAGGRSQGYGFVEFLDPDDAVVAARTMSGTIIANRKIIVSMAPQPKGGXXXXXXXXXAADTALVYVGNLANDTEELELKRHMQSAGRVVNVNMVTDAAGRSRGYAIVQFGRPNEXXXXXEARKAIQTLHGSSLLGRKLIVHEDRDTGKGAASQXXXXXXXXXXXXXXXXXXXXXXXXVVPREGLASPRVFVGNLSFDVTWQVLKDHMRQAGDAKHVYIMERDGRSAGCAIVTYGSEAEAERAIVQLHDTELRGRLIYVREDREDSNREGGXXXXRGRARDDGMDNSMIVDTGRDAEARSVIVTNIDRDITWRELKDHFSAVGKVQFVEIPDTDGNPHAIVRYADERSAGAAIARLSRTTLGTRRIIVLGFQ 509          
BLAST of jgi.p|Trimin1|349310 vs. uniprot
Match: D7G466_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G466_ECTSI)

HSP 1 Score: 191 bits (486), Expect = 7.540e-52
Identity = 154/419 (36.75%), Postives = 203/419 (48.45%), Query Frame = 0
Query:  104 NARVRVESLAQTASLAQVLEAFESVGRVTRAEIPTDAGGRSQGYGFVEFLDPDDAVVAARTMSGTIIANRKIIV--SMAPQPKGGXXXXXXXXXAAD---------TALVYVGNLANDTEELELKRHMQSAGRVVNVNMVTDAAGRSRGYAIVQFGRPNEXXXXXEARKAIQTLHGSSLLGRKLIVHEDR----DTGKGAASQXXXXXXXXXXXXXXXXXXXXXXXXVVPREGLASPRVFVGNLSFDVTWQVLKDHMRQAGDAKHVYIM-ERDGRSAGCAIVTYGSEAEAERAIVQLHDTELRGRLIYVREDREDSNREGGXXXXRGRARDDGMDNSMIVDTGRDAEARSVIVTNIDRDITWRELKDHFSAVGKVQFVEIP-DTDGNP--HAIVRYADERSAGAAIARLSRTTLGTRRI 503
            N RV V +LA T +  ++ +   + G   +AE+P  A GRS+GYG V F     A  A   +  T +  R I +      Q  GG  XXXXXXX               V+V NLA D +  +LK HM++AG V+  ++     GRS+G   V+F +P       EAR AI  L  + L+GR + V E+R    + G+G                                 G A  +V+VGNLS++  WQ LKDHMR AG  K V +  E  GRS GCA+V Y +  EA  AI  LHDTEL GRLI+VREDRE+                  + +  I      AE R V V+N+  +  W+ LKDHF   G+VQFVEIP D  G    +A VR+  E+ A  AI +L  T L  RRI
Sbjct:   64 NNRVYVGNLAWTVTWKELKDLMGTCGPC-KAEVPCGADGRSRGYGLVTFTSAAGASDAIDRLQDTDLMGRPIYLREDREEQGFGGGGXXXXXXXXXXXXXXXXXNANCKVFVSNLAYDVQWQDLKDHMKNAGSVIRADVFVGPDGRSKGLGTVEFSKP------YEARNAISQLSETELMGRPIQVREERGDAGNHGRGVG-------------------------------GAAGAKVYVGNLSWECQWQDLKDHMRAAGSVKFVDLFQEPGGRSKGCAVVEYETPQEAHSAIRDLHDTELLGRLIFVREDREEGP----------------IGSKRIGQLHEGAEGRQVHVSNVSWETGWQSLKDHFKQCGRVQFVEIPEDAQGRSKGYATVRFGSEQDAADAINQLDGTDLDGRRI 428          
BLAST of jgi.p|Trimin1|349310 vs. uniprot
Match: H3GHR3_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GHR3_PHYRM)

HSP 1 Score: 155 bits (392), Expect = 2.620e-39
Identity = 125/359 (34.82%), Postives = 173/359 (48.19%), Query Frame = 0
Query:  155 PDDAVVAART-MSGTIIANRKIIVSMAP---QPKGGXXXXXXXXXAADTALVYVGNLANDTEELELKRHMQSAGRVVNVNMVTDAAGRSRGYAIVQFGRPNEXXXXXEARKAIQTLHGSSLLGRKLIVHEDRDTGKGAASQXXXXXXXXXXXXXXXXXXXXXXXXVVPREGLASPRVFVGNLSFDVTWQVLKDHMRQAGDAKHVYIMER-DGRSAGCAIVTYGSEAEAERAIVQLHDTELRGRLIYVREDREDSNREGGXXXXRGRARDDGMDNSMIVDTGRDAEARSVIVTNIDRDITWRELKDHFSAVGKVQ---FVEIPDTDGNPHAIVRYADERSAGAAIARLSRTTLGTRRIIV 505
            PD+A  A  T + G      + I   +P   Q + G         AA    VYVGNL+   +  +LK HMQ+AG V  +  V +  GRS+G  +V +           A+ AI TL+ S L GRK+ V EDR+T   AA                          V P+ G    RV+VGNLS++V WQ LKDHM++AG   H  ++E  +GRS GC +V Y ++ EA +AI +L+++EL GRLI+VREDRE    EGG            +        G   E R + V N+  +  W++LKD F  VG+V+     E PD       I+RY +   A  AI RL+   +  R I V
Sbjct:   26 PDNAGKAKSTWVEGAREKRAERIAQSSPYQVQGRNGDADVDMEQVAAVGCRVYVGNLSWSVKWQDLKDHMQAAGPV-ELATVLEWNGRSKGCGVVTYATEEA------AQNAIDTLNDSELGGRKIFVREDRETQPIAA--------------------------VKPKRGF---RVYVGNLSWNVKWQELKDHMKKAGTVVHADVLEESNGRSKGCGLVEYATQDEANKAIAELNNSELEGRLIFVREDREP---EGGSISK--------LAKRAAAPRGN-GEGRQLYVGNLPWETNWQQLKDLFRTVGEVERADIAEYPDGRSRGFGIIRYTNAADAWQAIERLNGLEIEGRLIEV 336          
BLAST of jgi.p|Trimin1|349310 vs. uniprot
Match: A0A1Q9DEF6_SYMMI (Putative RNA-binding protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9DEF6_SYMMI)

HSP 1 Score: 155 bits (391), Expect = 2.080e-38
Identity = 124/401 (30.92%), Postives = 180/401 (44.89%), Query Frame = 0
Query:  106 RVRVESLAQTASLAQVLEAFESVGRVTRAEIPTDAGGRSQGYGFVEFLDPDDAVVAARTMSGTIIANRKIIV--SMAPQPKGGXXXXXXXXXAADTALVYVGNLANDTEELELKRHMQSAGRVVNVNMVTDA---AGRSRGYAIVQFGRPNEXXXXXE---ARKAIQTLHGSSLLGRKLIVHEDRDTGKGAASQXXXXXXXXXXXXXXXXXXXXXXXXVVPREGLASP--RVFVGNLSFDVTWQVLKDHMRQAGDAKHVYIMERDG---RSAGCAIVTYGSEAEAERAIVQLHDTELRGRLIYVREDREDSNREGGXXXXRGRARDDGMDNSMIVDTGRDAEARSVIVTNIDRDITWRELKDHFSAVGKVQFVEIPDTDGNPHAIVRYADERSAGAAIARL 493
            RV V +L    +  ++ +  +SVG V  A+I T+  GRS+G G V F   +DA  A   ++ + ++ R+I V      Q  G                VYVGNLA      +LK H +S G V   +++++      RS+G  IV+F    E     +   A  A++ L G+ +LGRK+ V EDR++ +                                R+  A P  +VF GNL + VTWQ LKDHMRQ G+  HV I+  D    RS GC +V + +   A RA+  LHD+ L+GRL+YVRE  +D    GG               +  V  G+    +   V N+     W++LKDH  + G V  V +    G   A   Y  E +A  A A L
Sbjct:   31 RVYVSNLPWHVAWQELKDHMKSVGEVVYADIFTEDTGRSRGCGLVAFRRAEDAQRAVLELNDSELSGRQIAVREDRVDQSTG----------ERKDCRVYVGNLAWIATWKDLKDHFRSVGEVKRADILSEGNLEGARSKGAGIVEFSTKEEDLYPSDETRASAAVEQLTGTEILGRKIFVREDRESNRPQTLAWPPGDVWSRAMVAVAQGPGF-------RKSFAEPFTKVFAGNLPYSVTWQQLKDHMRQVGEVLHVEILMDDNDPRRSKGCGVVEFATFGAARRAVQYLHDSMLQGRLMYVREYHDDLKNAGGATA------------TKDVKAGQKFRVK---VGNVASGTRWQDLKDHLKSAGDVAHVAMLPGAGTGAATAAYTSEEAAIRAAATL 399          
BLAST of jgi.p|Trimin1|349310 vs. uniprot
Match: A0A7S2KX18_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KX18_9STRA)

HSP 1 Score: 156 bits (395), Expect = 2.320e-38
Identity = 144/414 (34.78%), Postives = 204/414 (49.28%), Query Frame = 0
Query:  106 RVRVESLAQTASLAQVLEAFESVGRVTRAEIPTDAGGRSQGYGFVEFLDPDDAVVAARTMSGTIIANRKIIVSMAPQPKGGXXXXXXXXXAADTALVYVGNLANDTEELELKRHMQSAGRVVNVNMVTDAAGRSRGYAIVQFGRPNEXXXXXEARKAIQTLHGSSLLGRKLIVHEDRD---TGKGAASQXXXXXXXXXXXXXXXXXXXXXXXXVVPREGLASPRVFVGNLSFDVTWQVLKDHMRQAGDAKHVYIME-RDGRSAGCAIVTYGSEAEAERAIVQLHDTELRGRLIYVREDREDSNREGGXXXXRGRARDD------------------GMDNSMIVDTGRDAEARSVIVTNIDRDITWRELKDHFSAVGKVQFVEI---PDTDGNPHAIVRYADERSAGAAIARLS 494
            R+ V +L+ + S  ++ +  +S G VTRA+I     GRS+G G VEF   ++A  A  T++ + +  R+I V    + +            A +  VYVGNLA +    +LK HM+ AG V    ++    GRS+G  IV+F           A+ AI TL+ + L GR++ V EDR+   +G G   Q XXXXXXXXX     X  XXXX        L +  V+VGNL+++ TWQ LKDHMR+ G+     I++  DGRS GC IV Y S  EA+RAI +L ++EL GR I+VREDRE       XXXX                            +  ++      +   + V N+     WR+LKDHF   G V   E+   PD       ++R+     A  AI RL+
Sbjct:   91 RLYVGNLSWSVSWRELKDHMKSAGDVTRADILQTPDGRSKGCGIVEFATAEEASNAVETLNDSELMGRQIFVREDREAEKAAD--------ASSKRVYVGNLAYEVAWQDLKDHMRDAGEVQFAEVMMMNDGRSKGCGIVEFADEEG------AQNAIDTLNDTELCGRQIFVREDREQKVSGGGHHGQHXXXXXXXXXLNRVGXGAXXXXGRY--NNQLGNVNVYVGNLAYETTWQELKDHMRRVGNIDKADILQGNDGRSKGCGIVIYQSPKEAQRAIRELQNSELNGRPIFVREDRESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRTSGNLMPGAPSEQGCQLYVGNLSWGTGWRDLKDHFGQCGGVDRAEVAEGPDGRKKGFGVIRFHTAGDAAEAIERLN 488          
BLAST of jgi.p|Trimin1|349310 vs. uniprot
Match: A0A3R7H492_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7H492_9STRA)

HSP 1 Score: 152 bits (383), Expect = 9.520e-38
Identity = 114/308 (37.01%), Postives = 152/308 (49.35%), Query Frame = 0
Query:  202 VYVGNLANDTEELELKRHMQSAGRVVNVNMVTDAAGRSRGYAIVQFGRPNEXXXXXEARKAIQTLHGSSLLGRKLIVHEDRDTGKGAASQXXXXXXXXXXXXXXXXXXXXXXXXVVPREGLASPRVFVGNLSFDVTWQVLKDHMRQAGDAKHVYIMER-DGRSAGCAIVTYGSEAEAERAIVQLHDTELRGRLIYVREDREDSNREGGXXXXRGRARDDGMDNSMIVDTGRDAEARSVIVTNIDRDITWRELKDHFSAVGKVQ---FVEIPDTDGNPHAIVRYADERSAGAAIARLSRTTLGTRRIIV 505
            VYVGNL+   +  +LK HMQ+AG V  +  V +  GRS+G  IV +           A+ AI TL+ + L  RK+ V EDR+T   A ++                          P+ G    RV+VGNL ++V WQ LKDHM+QAG   H  ++E   GRS GC +V Y +E EA  AI QL++TEL GRLI+VREDRE           R  A  +G             E R + V N+  D  W++LKD F  VG+V+     E PD       I+RYA+   A  AI RL+   +  R I V
Sbjct:  106 VYVGNLSWSIKWQDLKDHMQAAGPV-ELATVLEWNGRSKGCGIVTYATEEA------AQNAIATLNDTELGERKIFVREDRETQAVATTK--------------------------PKRGF---RVYVGNLPWNVKWQELKDHMKQAGTVVHADVLEEAGGRSKGCGLVEYATEEEANNAIAQLNNTELEGRLIFVREDREPEGGSISKFAKRTAAPRNG------------GEGRQLYVGNLPWDTNWQQLKDLFRTVGEVERADIAEYPDGRSRGFGIIRYANPAHAFQAIERLNGLEIEGRLIEV 365          
BLAST of jgi.p|Trimin1|349310 vs. uniprot
Match: A0A2D4CCJ1_PYTIN (RNA binding protein putative (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CCJ1_PYTIN)

HSP 1 Score: 151 bits (382), Expect = 9.720e-38
Identity = 116/336 (34.52%), Postives = 158/336 (47.02%), Query Frame = 0
Query:  202 VYVGNLANDTEELELKRHMQSAGRVVNVNMVTDAAGRSRGYAIVQFGRPNEXXXXXEARKAIQTLHGSSLLGRKLIVHEDRDTGKGAASQXXXXXXXXXXXXXXXXXXXXXXXXVVPREGLASPRVFVGNLSFDVTWQVLKDHMRQAGDAKHVYIMER-DGRSAGCAIVTYGSEAEAERAIVQLHDTELRGRLIYVREDREDSNREGGXXXXRGRAR----------------------------DDGMDNSMIVDTGRDAEARSVIVTNIDRDITWRELKDHFSAVGKVQFVEIPD-TDGNP--HAIVRYADERSAGAAIARLSRTTLGTRRIIV 505
            VYVGNLA   +  +LK +M+SAG V  V ++ D AGRS+G A+V F          +A++AI TL+ +   GR L V EDRD   G+ +                           P  G    RVFVGNLS+++ WQ LKD+ ++AG   H  +ME   GRS G  +V + +  EA++AI  LHD+EL GR I+VREDRE+ +        RG                                  M  S       + E  ++ V N+   + W+ELKDHF   G V+ VEIP  +DG    + IVR+     A  AI R + T L  R IIV
Sbjct:   25 VYVGNLAWAVQWQDLKDYMRSAGEVERVVLMEDHAGRSKGCAVVTF------VTEADAQRAIHTLNDTEFHGRXLFVREDRDPQSGSNTGAWNPPGPPLAPLLPPPHSVQDAGPPAPTLGR---RVFVGNLSWNIKWQDLKDYFKKAGRVLHADVMEEAGGRSRGFGLVEFSTAEEAQQAIAMLHDSELDGRRIFVREDRENESGSISSIAKRGNIPPPLAPIPIPGSNGAPGMLPXXXXXXXXYSQQMPPSSSYAPAANNEGTTLFVGNLPYGVNWQELKDHFREAGDVEHVEIPQLSDGKSRGYGIVRFVHPDDAMHAIDRFNGTELKGRTIIV 351          
BLAST of jgi.p|Trimin1|349310 vs. uniprot
Match: A0A329T2W9_9STRA (Uncharacterized protein n=25 Tax=Phytophthora TaxID=4783 RepID=A0A329T2W9_9STRA)

HSP 1 Score: 151 bits (381), Expect = 9.840e-38
Identity = 114/308 (37.01%), Postives = 157/308 (50.97%), Query Frame = 0
Query:  202 VYVGNLANDTEELELKRHMQSAGRVVNVNMVTDAAGRSRGYAIVQFGRPNEXXXXXEARKAIQTLHGSSLLGRKLIVHEDRDTGKGAASQXXXXXXXXXXXXXXXXXXXXXXXXVVPREGLASPRVFVGNLSFDVTWQVLKDHMRQAGDAKHVYIME-RDGRSAGCAIVTYGSEAEAERAIVQLHDTELRGRLIYVREDREDSNREGGXXXXRGRARDDGMDNSMIVDTGRDAEARSVIVTNIDRDITWRELKDHFSAVGKVQ---FVEIPDTDGNPHAIVRYADERSAGAAIARLSRTTLGTRRIIV 505
            VYVGNL+   +  +LK HMQ+AG V  +  V +  GRS+G  +V +           A+ AI TL+ + L GRK+ V EDR+    AA++                          P  G    RV+VGNLS++V WQ LKDHM++AG   H  ++E  +GRS GC +V Y +E EA +AI +L++TEL GRLI+VREDRE    EGG      +        S    +G   E+R + V N+  D  W++LKD F  VG V+     E PD       I+RY +   A  AI RL+   +  R I V
Sbjct:   78 VYVGNLSWSIKWQDLKDHMQAAGPV-ELATVLEWNGRSKGCGVVTYATEEA------AQNAIATLNDTELGGRKIFVREDREAQPTAAAK--------------------------PLRGF---RVYVGNLSWNVKWQELKDHMKKAGTVVHADVLELANGRSKGCGLVEYATEEEAAKAIAELNNTELEGRLIFVREDREP---EGGSISKFAKRA------SAPHGSG---ESRQLYVGNLPWDTNWQQLKDLFRTVGDVERADIAEYPDGRSRGFGIIRYTNAADAWQAIERLNGLEIEGRLIEV 337          
BLAST of jgi.p|Trimin1|349310 vs. uniprot
Match: W2R296_PHYPN (Uncharacterized protein n=8 Tax=Phytophthora parasitica TaxID=4792 RepID=W2R296_PHYPN)

HSP 1 Score: 150 bits (380), Expect = 1.190e-37
Identity = 121/353 (34.28%), Postives = 164/353 (46.46%), Query Frame = 0
Query:  157 DAVVAARTMSGTIIANRKIIVSMAPQPKGGXXXXXXXXXAADTALVYVGNLANDTEELELKRHMQSAGRVVNVNMVTDAAGRSRGYAIVQFGRPNEXXXXXEARKAIQTLHGSSLLGRKLIVHEDRDTGKGAASQXXXXXXXXXXXXXXXXXXXXXXXXVVPREGLASPRVFVGNLSFDVTWQVLKDHMRQAGDAKHVYIME-RDGRSAGCAIVTYGSEAEAERAIVQLHDTELRGRLIYVREDREDSNREGGXXXXRGRARDDGMDNSMIVDTGRDAEARSVIVTNIDRDITWRELKDHFSAVGKVQ---FVEIPDTDGNPHAIVRYADERSAGAAIARLSRTTLGTRRIIV 505
            D  V  R    T    RKI         GG         ++    VYVGNL+   +  +LK HMQ+AG V  +  V +  GRS+G  IV +           A+ AI TL+ + L GRK+ V EDR+    + ++                          P+ G    RV+VGNLS++V WQ LKDHM++AG   H  ++E  +GRS GC +V Y +E EA +AI +L++TEL GRLI+VREDRE    EGG                     G   E R + V N+  D  W++LKD F  VG V+     E PD       I+RY +   A  AI RL+   +  R I V
Sbjct:   27 DMFVTVRRQRRTYRGGRKIEGESFWGCVGGDEDVEIEQTSSVGCRVYVGNLSWSIKWQDLKDHMQAAGPV-ELATVLEWNGRSKGCGIVTYATEEA------AQNAIATLNDTELGGRKIFVREDREAQPTSTAK--------------------------PKRGF---RVYVGNLSWNVKWQELKDHMKKAGTVVHADVLELANGRSKGCGLVEYATEEEAAKAIAELNNTELEGRLIFVREDREP---EGGSISK--------FAKRAAAPRGS-GEGRQLYVGNLPWDTNWQQLKDLFRTVGDVERADIAEYPDGRSRGFGIIRYTNASDAWQAIERLNGLEIEGRLIEV 331          
BLAST of jgi.p|Trimin1|349310 vs. uniprot
Match: A0A0P1AA48_PLAHL (Rna-binding protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AA48_PLAHL)

HSP 1 Score: 149 bits (377), Expect = 3.550e-37
Identity = 110/308 (35.71%), Postives = 151/308 (49.03%), Query Frame = 0
Query:  202 VYVGNLANDTEELELKRHMQSAGRVVNVNMVTDAAGRSRGYAIVQFGRPNEXXXXXEARKAIQTLHGSSLLGRKLIVHEDRDTGKGAASQXXXXXXXXXXXXXXXXXXXXXXXXVVPREGLASPRVFVGNLSFDVTWQVLKDHMRQAGDAKHVYIME-RDGRSAGCAIVTYGSEAEAERAIVQLHDTELRGRLIYVREDREDSNREGGXXXXRGRARDDGMDNSMIVDTGRDAEARSVIVTNIDRDITWRELKDHFSAVGKVQ---FVEIPDTDGNPHAIVRYADERSAGAAIARLSRTTLGTRRIIV 505
            VYVGNL+   +  +LK HMQ AG V     V +  GRS+G  I+ +           A++AI TL+ + L GRK+ V EDR++   AA +                          P+ G    RV+VGNLS+ V WQ LKDHM++AG   H  ++E  +GRS GC +V Y +  EA  AI +L++TEL GRLI+VREDRE           R  A   G           + E R + V N+  D  W++LKD F  VG+V+     E PD       I+RY     A  AI R++   +  R+I V
Sbjct:   76 VYVGNLSWSIKSQDLKEHMQVAGPVETAT-VLEWNGRSKGCGIITYATEEA------AQEAISTLNDTELGGRKIFVREDRESQFVAAGK--------------------------PKRGF---RVYVGNLSWTVKWQELKDHMKKAGTVVHADVLELANGRSKGCGLVEYSTPEEAATAIAELNNTELDGRLIFVREDREPEGGSISKFAKRSNAPSRG-----------NGEGRQLYVGNLPWDTNWQQLKDLFRTVGEVERADIAEYPDGRSRGFGIIRYTTAADAWQAIERMNGMEVEGRQIEV 336          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349310 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CCR9_9STRA9.670e-270100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G466_ECTSI7.540e-5236.75Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
H3GHR3_PHYRM2.620e-3934.82Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A1Q9DEF6_SYMMI2.080e-3830.92Putative RNA-binding protein n=3 Tax=Symbiodinium ... [more]
A0A7S2KX18_9STRA2.320e-3834.78Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A3R7H492_9STRA9.520e-3837.01Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A2D4CCJ1_PYTIN9.720e-3834.52RNA binding protein putative (Fragment) n=1 Tax=Py... [more]
A0A329T2W9_9STRA9.840e-3837.01Uncharacterized protein n=25 Tax=Phytophthora TaxI... [more]
W2R296_PHYPN1.190e-3734.28Uncharacterized protein n=8 Tax=Phytophthora paras... [more]
A0A0P1AA48_PLAHL3.550e-3735.71Rna-binding protein n=1 Tax=Plasmopara halstedii T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 326..397
e-value: 1.6E-18
score: 77.5
coord: 201..279
e-value: 7.0E-13
score: 58.8
coord: 437..506
e-value: 3.4E-10
score: 49.9
coord: 106..178
e-value: 3.4E-15
score: 66.5
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 107..175
e-value: 3.3E-13
score: 49.3
coord: 327..394
e-value: 2.3E-15
score: 56.1
coord: 202..276
e-value: 6.6E-13
score: 48.3
coord: 438..503
e-value: 2.2E-12
score: 46.6
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 105..182
score: 14.760482
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 325..401
score: 13.907712
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 200..283
score: 13.958878
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 436..509
score: 10.581908
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 318..431
e-value: 4.4E-23
score: 83.9
coord: 194..317
e-value: 7.5E-21
score: 76.6
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 436..506
e-value: 1.6E-13
score: 52.3
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 59..193
e-value: 6.1E-18
score: 67.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 288..309
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 274..319
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..88
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 400..421
NoneNo IPR availablePANTHERPTHR23003RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEINcoord: 324..503
NoneNo IPR availablePANTHERPTHR23003:SF3FI21236P1coord: 324..503
NoneNo IPR availablePANTHERPTHR23003:SF3FI21236P1coord: 198..315
coord: 82..181
NoneNo IPR availablePANTHERPTHR23003RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEINcoord: 198..315
NoneNo IPR availablePANTHERPTHR23003RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEINcoord: 82..181
NoneNo IPR availableCDDcd00590RRM_SFcoord: 202..279
e-value: 2.46083E-17
score: 74.6489
NoneNo IPR availableCDDcd00590RRM_SFcoord: 107..178
e-value: 1.01516E-14
score: 66.9449
NoneNo IPR availableCDDcd00590RRM_SFcoord: 438..505
e-value: 4.43186E-14
score: 65.4041
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 102..189
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 326..505
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 198..315

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_41contigContig_41:234742..245485 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349310mRNA_4417Tribonema minus UTEX_B_3156 mRNAContig_41 234742..245485 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|349310|estExt_Genemark1.C_Ctg_410034 ID=Trimin1|349310|estExt_Genemark1.C_Ctg_410034|Name=jgi.p|Trimin1|349310|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=510bp
MNVFHDPAQAEALLSMSLDDISKARKKADTPSASKPKKAAGVANGGAAAG
GGRGKAGGGGRAKRQQRQAAQAPYQVPAAAARGGGAANGRGGGGGGGAAA
ARGNARVRVESLAQTASLAQVLEAFESVGRVTRAEIPTDAGGRSQGYGFV
EFLDPDDAVVAARTMSGTIIANRKIIVSMAPQPKGGAGGGGAAPPAADTA
LVYVGNLANDTEELELKRHMQSAGRVVNVNMVTDAAGRSRGYAIVQFGRP
NEFGRPNEARKAIQTLHGSSLLGRKLIVHEDRDTGKGAASQQAPQQRQQQ
QQSRQLGGGGGNNGGVVPREGLASPRVFVGNLSFDVTWQVLKDHMRQAGD
AKHVYIMERDGRSAGCAIVTYGSEAEAERAIVQLHDTELRGRLIYVREDR
EDSNREGGGGGGRGRARDDGMDNSMIVDTGRDAEARSVIVTNIDRDITWR
ELKDHFSAVGKVQFVEIPDTDGNPHAIVRYADERSAGAAIARLSRTTLGT
RRIIVLGFQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf