Trimin1|349291|estExt_Genemark1.C_Ctg_410004 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|349291
Unique NameTrimin1|349291|estExt_Genemark1.C_Ctg_410004
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length610
Homology
BLAST of jgi.p|Trimin1|349291 vs. uniprot
Match: A0A836CC40_9STRA (TFIIE alpha subunit-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC40_9STRA)

HSP 1 Score: 785 bits (2028), Expect = 7.280e-280
Identity = 609/609 (100.00%), Postives = 609/609 (100.00%), Query Frame = 0
Query:    1 MSTQQDIDQIHILQQAEKLVSTVVRAFFDDDAVLVIDTLIREKYLKDKDDDLGARLGLQPKQVRAVLARLEREGLARQEEMLDEFSGGRKANYWYVDYRHAVNVIRLRTYLMQRRLKEAERAELARQTYACPQCGATFGVLEIQKLVNGARGFCCSHCCEMDTHETCARGPHSLRDFDNRERLATVTRALRELKEQLSASAAPGCARAGVYDLVXXXXXXXXXXXXXXXXXXXXXXXXXESRGXXXXXXXXXXXXXXXXVYDLVKEAVRAXXXXXXXXXQLHDKPVPSNLPSELRARGVGGGARGSHGASKLARFRDDRFSLHAGYAAGTKGGDGAHGSNRAVDLLYARNAAGYEVVVEIESDSDADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALPTFLKGSRISAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAELVRQQARLGAEXXXXXXXXXXXXXXXXXXXXXXIAEGTTDTEEDIDWEAAADGDTAATGSGAGDVKLPPPRSGVTFEVDGAHVPLEWLTAEHIGAMGADQYRRDDMAVRGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWRRDNAGGKACY 609
            MSTQQDIDQIHILQQAEKLVSTVVRAFFDDDAVLVIDTLIREKYLKDKDDDLGARLGLQPKQVRAVLARLEREGLARQEEMLDEFSGGRKANYWYVDYRHAVNVIRLRTYLMQRRLKEAERAELARQTYACPQCGATFGVLEIQKLVNGARGFCCSHCCEMDTHETCARGPHSLRDFDNRERLATVTRALRELKEQLSASAAPGCARAGVYDLVXXXXXXXXXXXXXXXXXXXXXXXXXESRGXXXXXXXXXXXXXXXXVYDLVKEAVRAXXXXXXXXXQLHDKPVPSNLPSELRARGVGGGARGSHGASKLARFRDDRFSLHAGYAAGTKGGDGAHGSNRAVDLLYARNAAGYEVVVEIESDSDADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALPTFLKGSRISAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAELVRQQARLGAEXXXXXXXXXXXXXXXXXXXXXXIAEGTTDTEEDIDWEAAADGDTAATGSGAGDVKLPPPRSGVTFEVDGAHVPLEWLTAEHIGAMGADQYRRDDMAVRGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWRRDNAGGKACY
Sbjct:    1 MSTQQDIDQIHILQQAEKLVSTVVRAFFDDDAVLVIDTLIREKYLKDKDDDLGARLGLQPKQVRAVLARLEREGLARQEEMLDEFSGGRKANYWYVDYRHAVNVIRLRTYLMQRRLKEAERAELARQTYACPQCGATFGVLEIQKLVNGARGFCCSHCCEMDTHETCARGPHSLRDFDNRERLATVTRALRELKEQLSASAAPGCARAGVYDLVXXXXXXXXXXXXXXXXXXXXXXXXXESRGXXXXXXXXXXXXXXXXVYDLVKEAVRAXXXXXXXXXQLHDKPVPSNLPSELRARGVGGGARGSHGASKLARFRDDRFSLHAGYAAGTKGGDGAHGSNRAVDLLYARNAAGYEVVVEIESDSDADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALPTFLKGSRISAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAELVRQQARLGAEXXXXXXXXXXXXXXXXXXXXXXIAEGTTDTEEDIDWEAAADGDTAATGSGAGDVKLPPPRSGVTFEVDGAHVPLEWLTAEHIGAMGADQYRRDDMAVRGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWRRDNAGGKACY 609          
BLAST of jgi.p|Trimin1|349291 vs. uniprot
Match: A0A6H5LCE2_9PHAE (HTH TFE/IIEalpha-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCE2_9PHAE)

HSP 1 Score: 241 bits (616), Expect = 1.240e-68
Identity = 152/362 (41.99%), Postives = 196/362 (54.14%), Query Frame = 0
Query:    6 DIDQIHILQQAEKLVSTVVRAFFDDDAVLVIDTLIREKYLKDKDDDLGARLGLQPKQVRAVLARLEREGLARQEEMLDEFSGGRKANYWYVDYRHAVNVIRLRTYLMQRRLKEAERAELARQ---TYACPQCGATFGVLEIQKLVNGARGFCCSHCCEMDTHETCARGP-HSLRDFDNRERLATVTRALRELKEQLSASAAPGCARAGVYDLVXXXXXXXXXXXXXXXXXXXXXXXXXESRGXXXXXXXXXXXXXXXXVYDLVKEAVRAXXXXXXXXXQLHDKPVPSNLPSELRARGVGGGARGSHGASKLARFRDD--RFSLHAGYAAGTKGGDGAHGSNRAVDLLYARNAAGYEVVVEIE 361
            D++ I  LQ+AE+LV+T+ RAF+ D  VLV+DTLIREKY+KDKD+DLG+RL LQPKQVR+ LA L  EG A +E M DE   GR +NYWY+D RHAVNVI LR + M+  L + + A+ A Q   TY CP+C   F V++I KL NG R FCCSHCC  D H  C +G  ++L DF++++ L +VT  + +L EQL  S  P   R  +++LV                                                                  L D  VPSNLPS+LR RG+GG  RG   +S  ARF+DD       A  AA  +G  G   S+R V +LY +N  G EVVVEIE
Sbjct:    3 DMNAIVALQKAERLVATIARAFYTDITVLVVDTLIREKYIKDKDEDLGSRLNLQPKQVRSALAELLAEGFAAKEMMSDEIYSGRSSNYWYIDLRHAVNVILLRVFQMKEILSQRQEAKAAHQALPTYVCPRCHEKFEVMDIYKLSNGDRSFCCSHCCPNDDHSGCKKGSGYTLEDFNDKKGLDSVTALIGQLNEQLGESTDPAVPRESIFELVH----------------------------------------------------------------SLRDTVVPSNLPSQLRQRGMGGQQRGDV-SSAHARFQDDFHHRGRAADKAAAERGAAGGRASSRPVQVLYTKNWRGEEVVVEIE 299          
BLAST of jgi.p|Trimin1|349291 vs. uniprot
Match: A0A7S3Y5E8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5E8_HETAK)

HSP 1 Score: 150 bits (378), Expect = 2.070e-37
Identity = 92/203 (45.32%), Postives = 121/203 (59.61%), Query Frame = 0
Query:   17 EKLVSTVVRAFFDDDAVLVIDTLIREKYLKDKDDDLGARLGLQPKQVRAVLARLEREGLARQEEMLDEFSGGRKANYWYVDYRHAVNVIRLRTYLMQRRLKEAERAELARQTYACPQCGATFGVLEIQKLVNGARGFCCSHCCEMDTHETCARG--PHS--LRDFDNRERLATVTRALRELKEQLSASAAPGCARA-GVYDLV 214
            E+L  TVVRAF+DD+ V+V+D LIR + ++D   DLG   GL PKQVR  + RL+ E L   E+  D+ + GR + YW+V+YR  V  +  R +  Q+ L+  ER E  RQTY C  C   F +LE+Q+L NG RGFCCSHCC  DTH  C R   P S  L++    +      RALR L+ QLSA+   G  R  GV DL+
Sbjct:   10 ERLAGTVVRAFYDDELVMVMDMLIRHRQIRDA--DLGVVTGLAPKQVRKAVQRLQAEKLCDFEKASDD-AQGRASVYWFVNYRRLVLAVTWRCHRAQQVLEARERKEQERQTYVCEACALQFTLLEVQRLANGGRGFCCSHCCPYDTHAGCGRDGRPTSFPLKEVAAGDGAERARRALRRLRRQLSAAPGGGAWRPDGVLDLL 209          
BLAST of jgi.p|Trimin1|349291 vs. uniprot
Match: D8LCF1_ECTSI (HTH TFE/IIEalpha-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCF1_ECTSI)

HSP 1 Score: 135 bits (341), Expect = 1.040e-33
Identity = 71/122 (58.20%), Postives = 91/122 (74.59%), Query Frame = 0
Query:    6 DIDQIHILQQAEKLVSTVVRAFFDDDAVLVIDTLIREKYLKDKDDDLGARLGLQPKQVRAVLARLEREGLARQEEMLDEFSGGRKANYWYVDYRHAVNVIRLRTYLMQRRLKEAERAELARQ 127
            D++ I  LQ+AE+LVST+ RAF+ D  VLV+DTLIREKY+KDKD++LG+RL LQPKQVR+ LA L  EG A +E M DE   GR +NYWY+D RHAVNVI LR + M+  L + + A+ A Q
Sbjct:    3 DMNAIVALQKAERLVSTIARAFYTDITVLVVDTLIREKYIKDKDEELGSRLNLQPKQVRSALAELLAEGFAAKEMMSDEIYSGRSSNYWYIDLRHAVNVILLRVFQMKEILSQRQEAKAAHQ 124          
BLAST of jgi.p|Trimin1|349291 vs. uniprot
Match: A0A7S0CBM9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CBM9_9STRA)

HSP 1 Score: 132 bits (333), Expect = 4.490e-30
Identity = 88/211 (41.71%), Postives = 123/211 (58.29%), Query Frame = 0
Query:   16 AEKLVSTVVRAFFDDDAVLVIDTLIREKYLKDKDDDLGARLGLQPKQVRAVLARLEREGLARQEEMLDEFSGGRKAN-YWYVDYRHAVNVIRLRTYLMQRRLKEAERAELARQTYACP-----QCGATFGVLEIQKLVNGARG-FCCSHCCEMDTH----ETCARGPHSLRDFDNRERLATVTRALRELKEQL-SASAAPGCARAGVYDLV 214
            AE L++ VVRAF++DDAV +ID L+R+KYL+D  DD+G RL L  K+VRA L  LE E L + E + D  +GG +A  YWY+D+ HAVNVIRLR YL++++ KEAE   L+   Y CP      C   +   E Q+LV+   G F C  C  + TH    E      ++L   DN++ L      +R ++ QL S +      R G+YDL+
Sbjct:    8 AEALIAAVVRAFYEDDAVSLIDVLLRDKYLRD--DDMGPRLSLPVKKVRATLQHLELEHLVKFELVDDLSTGGSQATKYWYIDFNHAVNVIRLRIYLLEKKQKEAEIRALSSSMYLCPGYKTKACNGRYTETEAQQLVHPETGLFLCQEC--LQTHCNNPEPPPMSTYTLELIDNKKDLTAAQNNMRRVRVQLGSKTVGAQQLRVGIYDLL 214          
BLAST of jgi.p|Trimin1|349291 vs. uniprot
Match: A0A6S9HML8_9STRA (Hypothetical protein n=3 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A6S9HML8_9STRA)

HSP 1 Score: 132 bits (332), Expect = 2.140e-29
Identity = 87/211 (41.23%), Postives = 123/211 (58.29%), Query Frame = 0
Query:   16 AEKLVSTVVRAFFDDDAVLVIDTLIREKYLKDKDDDLGARLGLQPKQVRAVLARLEREGLARQEEMLDEFSGG-RKANYWYVDYRHAVNVIRLRTYLMQRRLKEAERAELARQTYACP-----QCGATFGVLEIQKLVNGARG-FCCSHCCEMDTHETCARGP----HSLRDFDNRERLATVTRALRELKEQLSASAAPGCA-RAGVYDLV 214
            AE L++TV RAF+DDDAV +ID L+R+K+L+D  DD+G RL L P+Q+R  L  L+ E L + E + D  SGG +   +WY+DY HAVNVIRLR YL++++L+EAE    +   Y CP      C   +   E Q++V+   G F C  C  + THE+    P    ++L+  DN   L      +R +  QLSA        RAG+YDL+
Sbjct:    8 AEALIATVARAFYDDDAVCLIDVLLRDKFLRD--DDMGPRLSLPPRQLRRTLQFLQEEHLVKYEHVDDLSSGGSQNTKFWYIDYNHAVNVIRLRVYLLKKKLEEAELRARSSSMYLCPGYKTKACNGRYTETEAQQVVDHECGLFLCPEC--VTTHESNPDPPPKSTYTLQLLDNTRDLRLAMDNMRRVNVQLSAKMIGNHQLRAGIYDLL 214          
BLAST of jgi.p|Trimin1|349291 vs. uniprot
Match: A0A482S8Q7_9ARCH (HTH TFE/IIEalpha-type domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S8Q7_9ARCH)

HSP 1 Score: 126 bits (317), Expect = 5.700e-28
Identity = 73/188 (38.83%), Postives = 115/188 (61.17%), Query Frame = 0
Query:   13 LQQAEKLVSTVVRAFFDDDAVLVIDTLIREKYLKDKDDDLGARLGLQPKQVRAVLARLEREGLARQEEMLDEFSGGRKANYW---YVDYRHAVNVIRLRTYLMQRRLKEAERAELARQTYACPQCGATFGVLEIQKLVNGARGFCCSHCCEMDTHETCARGPH-SLRDFDNRERLATVTRALRELKEQ 196
            L  AE+L++T+ RAF+ DD V+V+D L+REKYL D+  ++G RL +  K VR V+ +LE E L + E++      G  A++W   YVDY+  VN++R R +LMQ+RL + E +EL+   Y CP C   F  L+  KL++    F CSHCC  +   T    P+ +L + DNR +++++    +++ EQ
Sbjct:   10 LDLAEQLIATIARAFYPDDVVVVLDALVREKYLIDR--EIGPRLKMSEKDVRKVINQLETEMLIKAEDV----PLGDGASFWHCYYVDYQVFVNIVRYRVFLMQQRLNKQESSELSEVQYKCPTCKNVFSSLDALKLLSSDHKFICSHCCPHENCRTLPAEPYFTLIEIDNRRKISSLQTQQKKMSEQ 191          
BLAST of jgi.p|Trimin1|349291 vs. uniprot
Match: A0A1V9Z9T9_9STRA (HTH TFE/IIEalpha-type domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9Z9T9_9STRA)

HSP 1 Score: 125 bits (313), Expect = 4.800e-27
Identity = 73/185 (39.46%), Postives = 111/185 (60.00%), Query Frame = 0
Query:   17 EKLVSTVVRAFFDDDAVLVIDTLIREKYLKDKDDDLGARLGLQPKQVRAVLARLEREGLARQEEMLDEFSGGR-KANYWYVDYRHAVNVIRLRTYLMQRRLKEAERAELARQTYACPQ--CGATFGVLEIQKLVN-GARGFCCSHCCEMDTHETCARGPHSLRDFDNRERLATVTRALRELKEQL 197
            EKLV  + RAF+ D+ ++V++ L+RE++LKD  D++G  + LQ KQVR +   LE+E +  +EE+ D+  GG  KA YWY+DY+H VNV+R R Y++   LKE+E+ E+ RQT+ C    CG  +  LE Q L++ G   F C HC               L + DN E+L T+   L+++  Q+
Sbjct:    6 EKLVRLIARAFYSDEHIVVLEALLRERFLKD--DEMGNAVNLQTKQVRKICHDLEKEDMISREELNDKKLGGASKATYWYIDYKHFVNVVRYRLYIIAHHLKESEQLEIERQTFRCSNDDCGREYTALEAQLLLSPGVFEFLCGHC------------NSKLVECDNNEKLQTIKGLLQKVSPQI 176          
BLAST of jgi.p|Trimin1|349291 vs. uniprot
Match: A0A7S2EVF6_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EVF6_TRICV)

HSP 1 Score: 117 bits (294), Expect = 3.900e-26
Identity = 80/211 (37.91%), Postives = 119/211 (56.40%), Query Frame = 0
Query:   16 AEKLVSTVVRAFFDDDAVLVIDTLIREKYLKDKDDDLGARLGLQPKQVRAVLARLEREGLARQEEMLDEFSGGRKAN-YWYVDYRHAVNVIRLRTYLMQRRLKEAERAELARQTYACP-----QCGATFGVLEIQKLVNGARG-FCCSHCCEMDTHETCARGP----HSLRDFDNRERLATVTRALRELKEQLSASAAPGCA-RAGVYDLV 214
            AE L++ V RAF++D+AV +ID LIR+K+L+D  DD+G RL L  KQ+R  L  L+ E L + E + D  SGG +A  +WY+DY HAVNVIRLR YL++R+L+++E    +   Y CP      C   +   E Q++++   G F C  C  ++ H      P    ++L+  DN + L      +R +  QL A        R G+YDL+
Sbjct:   19 AEALIAAVARAFYEDEAVCLIDVLIRDKFLRD--DDMGPRLSLPAKQLRRTLQFLQEEQLVKFELVDDLSSGGSQATKFWYIDYNHAVNVIRLRIYLLKRKLEQSELRARSSSMYLCPGYKTKACNGRYTETEAQQVIDMETGLFLCQEC--VNAHAANPDPPPKSTYTLQLLDNTKDLRLAMDNMRRVNVQLCAKMMGNSQLRPGIYDLL 225          
BLAST of jgi.p|Trimin1|349291 vs. uniprot
Match: A0A8K1C2Y0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C2Y0_PYTOL)

HSP 1 Score: 122 bits (306), Expect = 4.480e-26
Identity = 76/202 (37.62%), Postives = 121/202 (59.90%), Query Frame = 0
Query:   17 EKLVSTVVRAFFDDDAVLVIDTLIREKYLKDKDDDLGARLGLQPKQVRAVLARLEREGLARQEEMLDEFSGGRKA-NYWYVDYRHAVNVIRLRTYLMQRRLKEAERAELARQTYACPQ--CGATFGVLEIQKLVN-GARGFCCSHCCEMDTHETCARGPHSLRDFDNRERLATVTRALRELKEQLSASAAPGCARAGVYDLV 214
            EKLV+ + RAF+ D+ V+V+  LIREK+LKD  D++G  + LQ +QVR ++  L ++ L  +E + D+  GG  + +YWY+DY++ V V++ R Y+MQ  LKE E+ E+ RQTY C    CG  +  LE+Q+L+  G   F C HC E+            L + DN +RL  +    R+LK+Q++  A     R G+++++
Sbjct:   18 EKLVNLIGRAFYADEHVVVLQALIREKFLKD--DEMGNAVNLQTRQVRKIMNELHQDMLVCEEVLNDKRLGGSSSTSYWYIDYKYFVEVVQYRLYVMQEHLKENEKLEIERQTYQCKNSDCGREYTALEVQRLLMPGQFQFRCGHCNEV------------LLECDNNDRLEKIQALDRKLKDQMNRQAG---MREGIFEVL 202          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349291 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CC40_9STRA7.280e-280100.00TFIIE alpha subunit-domain-containing protein n=1 ... [more]
A0A6H5LCE2_9PHAE1.240e-6841.99HTH TFE/IIEalpha-type domain-containing protein n=... [more]
A0A7S3Y5E8_HETAK2.070e-3745.32Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
D8LCF1_ECTSI1.040e-3358.20HTH TFE/IIEalpha-type domain-containing protein n=... [more]
A0A7S0CBM9_9STRA4.490e-3041.71Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]
A0A6S9HML8_9STRA2.140e-2941.23Hypothetical protein n=3 Tax=Lithodesmiaceae TaxID... [more]
A0A482S8Q7_9ARCH5.700e-2838.83HTH TFE/IIEalpha-type domain-containing protein n=... [more]
A0A1V9Z9T9_9STRA4.800e-2739.46HTH TFE/IIEalpha-type domain-containing protein n=... [more]
A0A7S2EVF6_TRICV3.900e-2637.91Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A8K1C2Y0_PYTOL4.480e-2637.62Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 380..400
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 559..609
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 490..528
NoneNo IPR availableSUPERFAMILY57783Zinc beta-ribboncoord: 115..160
IPR002853Transcription initiation factor IIE subunit alpha, N-terminalSMARTSM00531tfiie3coord: 30..176
e-value: 4.9E-19
score: 79.2
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 115..169
e-value: 5.5E-6
score: 27.8
IPR024550TFIIEalpha/SarR/Rpc3 HTH domainPFAMPF02002TFIIE_alphacoord: 19..123
e-value: 2.1E-16
score: 59.7
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 13..101
e-value: 5.5E-8
score: 34.5
IPR039997Transcription factor EPANTHERPTHR13097TRANSCRIPTION INITIATION FACTOR IIE, ALPHA SUBUNITcoord: 5..198
IPR017919Transcription factor TFE/TFIIEalpha HTH domainPROSITEPS51344HTH_TFE_IIEcoord: 16..106
score: 17.673876
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 17..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_41contigContig_41:30804..37502 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349291mRNA_4385Tribonema minus UTEX_B_3156 mRNAContig_41 30564..37502 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|349291|estExt_Genemark1.C_Ctg_410004 ID=Trimin1|349291|estExt_Genemark1.C_Ctg_410004|Name=jgi.p|Trimin1|349291|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=610bp
MSTQQDIDQIHILQQAEKLVSTVVRAFFDDDAVLVIDTLIREKYLKDKDD
DLGARLGLQPKQVRAVLARLEREGLARQEEMLDEFSGGRKANYWYVDYRH
AVNVIRLRTYLMQRRLKEAERAELARQTYACPQCGATFGVLEIQKLVNGA
RGFCCSHCCEMDTHETCARGPHSLRDFDNRERLATVTRALRELKEQLSAS
AAPGCARAGVYDLVKELKEQLSASAAPGCARAGVYDLVKESRGCARAGVY
DLVKESKGCVYDLVKEAVRARAGVYDLVKQLHDKPVPSNLPSELRARGVG
GGARGSHGASKLARFRDDRFSLHAGYAAGTKGGDGAHGSNRAVDLLYARN
AAGYEVVVEIESDSDADDDGAAAAAGLSSRRAAKRKADAAAAAARNAKKA
ALPTFLKGSRISAADGGGDGGGGADAASATEAAAAAAAAAPADDEEQRRA
LYHAELVRQQARLGAENGGSGGGVQPAAAAAAAAAAAAIAEGTTDTEEDI
DWEAAADGDTAATGSGAGDVKLPPPRSGVTFEVDGAHVPLEWLTAEHIGA
MGADQYRRDDMAVRGSGGGGGGSGSSGSGSGGGGGGPWRSRHRRRQRWRR
DNAGGKACY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002853TFIIE_asu
IPR013083Znf_RING/FYVE/PHD
IPR024550TFIIEa/SarR/Rpc3_HTH_dom
IPR036388WH-like_DNA-bd_sf
IPR039997TFE
IPR017919TFIIE/TFIIEa_HTH
IPR036390WH_DNA-bd_sf