Trimin1|166035|e_gw1.41.198.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|166035
Unique Name	Trimin1\|166035\|e_gw1.41.198.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	418

Homology

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BLAST of jgi.p|Trimin1|166035 vs. uniprot
Match: A0A835YX16_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX16_9STRA)

HSP 1 Score: 337 bits (864), Expect = 2.190e-109
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0

Query:    1 MKWCDDHRSYAKCRREGCDKQPSFNVRGAGAQWCSEHKSPGMIDITSARCKCGRAGPSLGQPGDRKPTCCAKCREPGMVSLRKVHPKCRSEGCEKRPTFNVPGAGAQWCAAHKGPEMIDCVSARCKCGSLVPRYGFEGDRRPTSCLRC 148
            MKWCDDHRSYAKCRREGCDKQPSFNVRGAGAQWCSEHKSPGMIDITSARCKCGRAGPSLGQPGDRKPTCCAKCREPGMVSLRKVHPKCRSEGCEKRPTFNVPGAGAQWCAAHKGPEMIDCVSARCKCGSLVPRYGFEGDRRPTSCLRC
Sbjct:    1 MKWCDDHRSYAKCRREGCDKQPSFNVRGAGAQWCSEHKSPGMIDITSARCKCGRAGPSLGQPGDRKPTCCAKCREPGMVSLRKVHPKCRSEGCEKRPTFNVPGAGAQWCAAHKGPEMIDCVSARCKCGSLVPRYGFEGDRRPTSCLRC 148

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BLAST of jgi.p|Trimin1|166035 vs. uniprot
Match: A0A836CJD5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJD5_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 6.160e-15
Identity = 35/71 (49.30%), Postives = 45/71 (63.38%), Query Frame = 0

Query:    2 KWCDDHRSYAKCRREGCDKQ-PSFNVRGAGAQWCSEHKSPGMIDITSARCKCGRAGPSLGQPGDRKPTCCA 71
            KWC+DH+ +  CR  GC++Q P +N  G G QWCS HK  GM ++   RC CG A PS G P D + +CCA
Sbjct:   60 KWCEDHKIHKTCREPGCERQHPVYNYTGTGGQWCSTHKKDGMENVRDRRCACGTARPSFGFPDDERASCCA 130

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BLAST of jgi.p|Trimin1|166035 vs. uniprot
Match: A0A835ZBE1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBE1_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 4.590e-10
Identity = 31/68 (45.59%), Postives = 41/68 (60.29%), Query Frame = 0

Query:    2 KWCDDHRSYAKCRREGCDKQPSFNVRGAGAQWCSEHKSPGMIDITSARC-KCGRAGPSLGQPGDRKPT 68
            KWC +H+ +  CR +GC K P +N+ GA AQWC EHK+  M D+   RC +CG   P  G   D +PT
Sbjct:  340 KWCGEHKRFQVCRHQGCSKAPIYNIPGAAAQWCREHKTGDMQDVAHKRCMRCGLKIPKFGTE-DGRPT 406

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BLAST of jgi.p|Trimin1|166035 vs. uniprot
Match: A0A836CPB0_9STRA (EsV-1-7 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPB0_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 1.440e-9
Identity = 25/49 (51.02%), Postives = 36/49 (73.47%), Query Frame = 0

Query:    2 KWCDDHRSYAKCRREGCDKQPSFNVRGAGAQWCSEHKSPGMIDITSARC 50
            KWCD+H+   +C+++GC+K+PS+N+ GAGAQ+C  H   GM DI   RC
Sbjct:   21 KWCDEHKRLDECKKDGCNKKPSYNIPGAGAQYCKNHAEEGMEDIVHKRC 69

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|166035 vs. uniprot

BLAST of jgi.p|Trimin1|166035 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
A0A835YX16_9STRA	2.190e-109	100.00	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
A0A836CJD5_9STRA	6.160e-15	49.30	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZBE1_9STRA	4.590e-10	45.59	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CPB0_9STRA	1.440e-9	51.02	EsV-1-7 n=1 Tax=Tribonema minus TaxID=303371 RepID...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043822	EsV-1-7 cysteine-rich motif	PFAM	PF19114	EsV_1_7_cys	coord: 13..45 e-value: 3.8E-7 score: 30.5 coord: 120..156 e-value: 0.0068 score: 17.0 coord: 88..119 e-value: 2.7E-5 score: 24.7 coord: 161..192 e-value: 9.6E-4 score: 19.7 coord: 65..82 e-value: 0.19 score: 12.4 coord: 345..371 e-value: 0.67 score: 10.7 coord: 232..263 e-value: 5.5E-4 score: 20.5 coord: 305..335 e-value: 0.0061 score: 17.2 coord: 198..227 e-value: 0.0039 score: 17.8 coord: 267..299 e-value: 0.0076 score: 16.9 coord: 382..406 e-value: 0.038 score: 14.6
None	No IPR available	GENE3D	6.10.140.110		coord: 249..306 e-value: 9.4E-7 score: 31.0 coord: 144..203 e-value: 1.2E-5 score: 27.5 coord: 29..88 e-value: 2.9E-5 score: 26.3

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_41	contig	Contig_41:929682..931007 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|166035	mRNA_4521	Tribonema minus UTEX_B_3156	mRNA	Contig_41 929682..931007 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|166035|e_gw1.41.198.1 ID=Trimin1|166035|e_gw1.41.198.1|Name=jgi.p|Trimin1|166035|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=418bp
MKWCDDHRSYAKCRREGCDKQPSFNVRGAGAQWCSEHKSPGMIDITSARC
KCGRAGPSLGQPGDRKPTCCAKCREPGMVSLRKVHPKCRSEGCEKRPTFN
VPGAGAQWCAAHKGPEMIDCVSARCKCGSLVPRYGFEGDRRPTSCLRCKQ
PDMVDLTTKRCDCGRALPTFAFAGDRASRCAKCREPGMVDVRSKKCRCGR
ACPTFGLEGQRPQCCAQCREPGMVDVKGRRCACGKTQPNFGLPGDDRASC
CASCKRDGMVDIRSRRCVCGKSQPSYGFEGDPRATCCAKCRKSGMVDVVN
ERCRCGRARPNFGHESDGKAVCCAACKDPDMVNVKSTVCECGAAQPGFGF
ESDPRPTRCVRCQLPGMLDIRNRRCHCGSAVPNFGHDGAPRATHCARCKE
DGMIDVNNRRCEHGGFLK

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR043822	EsV_1_7_cys