mRNA_4401 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|165894
Unique NamemRNA_4401
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|165894 vs. uniprot
Match: A0A836CCR4_9STRA (Actin family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCR4_9STRA)

HSP 1 Score: 764 bits (1974), Expect = 6.460e-278
Identity = 419/419 (100.00%), Postives = 419/419 (100.00%), Query Frame = 1
Query:    1 MEDEGCSIVLDVGSGSTKIGYSGDDLPLSVLPSVIVSAAPVSDSRDTPSRAQRPECRECYRGYDSLHPEDHATRDIWPVQKGQCQSTADLETLLHNVFRTELGSGAEAQRPVLLTESPSTTRARRAEAAELLFEGLKAPALSMCNTASLSLFAAGRTRGLVVECGAGAAHAVPVFEGYALAHAALRVDAAGRDVTLRLAQLLQQQHGSSGGSGXXXGGSAPLSLDVVRAIKERMCHVLPRGXXXXXXXXXXXXXXXXXXADMKYELPDGSIVRISGECAAEPAEVLFENKHGRGGLASAAAAAIAMCDEQVRTDLRGAVVLSGGTTMLPGFCERFAQELEAAIDGGSGGAAPAADGLVRRPLTVVPHARAREPGYTAQRKYAAWIGGSIVASLSTFRLLQVSRQEYEDAGAGALHRRCL 1257
            MEDEGCSIVLDVGSGSTKIGYSGDDLPLSVLPSVIVSAAPVSDSRDTPSRAQRPECRECYRGYDSLHPEDHATRDIWPVQKGQCQSTADLETLLHNVFRTELGSGAEAQRPVLLTESPSTTRARRAEAAELLFEGLKAPALSMCNTASLSLFAAGRTRGLVVECGAGAAHAVPVFEGYALAHAALRVDAAGRDVTLRLAQLLQQQHGSSGGSGXXXGGSAPLSLDVVRAIKERMCHVLPRGXXXXXXXXXXXXXXXXXXADMKYELPDGSIVRISGECAAEPAEVLFENKHGRGGLASAAAAAIAMCDEQVRTDLRGAVVLSGGTTMLPGFCERFAQELEAAIDGGSGGAAPAADGLVRRPLTVVPHARAREPGYTAQRKYAAWIGGSIVASLSTFRLLQVSRQEYEDAGAGALHRRCL
Sbjct:    1 MEDEGCSIVLDVGSGSTKIGYSGDDLPLSVLPSVIVSAAPVSDSRDTPSRAQRPECRECYRGYDSLHPEDHATRDIWPVQKGQCQSTADLETLLHNVFRTELGSGAEAQRPVLLTESPSTTRARRAEAAELLFEGLKAPALSMCNTASLSLFAAGRTRGLVVECGAGAAHAVPVFEGYALAHAALRVDAAGRDVTLRLAQLLQQQHGSSGGSGXXXGGSAPLSLDVVRAIKERMCHVLPRGXXXXXXXXXXXXXXXXXXADMKYELPDGSIVRISGECAAEPAEVLFENKHGRGGLASAAAAAIAMCDEQVRTDLRGAVVLSGGTTMLPGFCERFAQELEAAIDGGSGGAAPAADGLVRRPLTVVPHARAREPGYTAQRKYAAWIGGSIVASLSTFRLLQVSRQEYEDAGAGALHRRCL 419          
BLAST of jgi.p|Trimin1|165894 vs. uniprot
Match: D8LC05_ECTSI (Actin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC05_ECTSI)

HSP 1 Score: 298 bits (762), Expect = 2.490e-94
Identity = 178/425 (41.88%), Postives = 250/425 (58.82%), Query Frame = 1
Query:    7 DEGCSIVLDVGSGSTKIGYSGDDLPLSVLPSVIVSAAPVSDSRDTPSRAQRPECRECYRGYDSLHPEDHATR-DIWPVQKGQCQSTADLETLLHNVFRTELGSGAEAQRPVLLTESPSTTRARRAEAAELLFEGLKAPALSMCNTASLSLFAAGRTRGLVVECGAGAAHAVPVFEGYALAHAALRVDAAGRDVTLRLAQLLQQQHGSSGGSGXXXGGSAPLSLDVVRAIKERMCHV-LPRGXXXXXXXXXXXXXXXXXXADMKYELPDGSIVRISGECAAEPAEVLFENKHGR---------GGLASAAAAAIAMCDEQVRTDLRGAVVLSGGTTMLPGFCERFAQELEAAIDGGSGGAAPAADGLVRRPLTVVPHARAREPGYTAQRKYAAWIGGSIVASLSTFRLLQVSRQEYEDAGAGALHR 1248
            +E  +IV+DVGS S K G+SG+D+P +V PSV       ++   T  RA+RPE RECY  Y +   +D A      PV++G  +   ++E L+ N+F  EL + A A  PVL+ E P   R++R E A ++FE  K PALS+CN++ L+LFA+GRTRGL +E G G AHAVPVFEG+AL HA LR++ AG+D+T RL  LL+++                L  D VR +KE +C++   RG                   + +YELPDG+ V +  EC ++ AE++F    G          GGLAS    +I+MCD+ +  DL G+VV++GGTTM+ GF ER   +L+     G+   A           +V+PH  + EPGY AQRK+A WIGGS++ASLS F+ LQV+RQEYED+G   +HR
Sbjct:    7 EEEATIVIDVGSSSAKAGFSGEDMPRAVCPSVAEDLHLSAEELST-YRARRPESRECYLEYGNTGKDDEAVAAGDHPVRRGVLRDIDEMEKLMDNLFNFELAAYAGAHTPVLMVEPPLNERSQRQEMAAMMFETFKVPALSVCNSSVLALFASGRTRGLALEVGGGVAHAVPVFEGFALNHAVLRLEGAGQDITNRLKGLLEER-------------GHHLPFDTVRDVKESLCYIPTDRGVAP---------------GEDEYELPDGNTVTLDSECRSQAAELIFNPDAGGKDFAARATDGGLASMVMQSISMCDKDINPDLLGSVVVAGGTTMMAGFVERLQDDLDRVSPPGAPMMA-----------SVIPHPTSHEPGYNAQRKHAPWIGGSMLASLSPFKQLQVTRQEYEDSGESIIHR 391          
BLAST of jgi.p|Trimin1|165894 vs. uniprot
Match: A0A7S2S4R5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S4R5_9STRA)

HSP 1 Score: 244 bits (623), Expect = 1.120e-73
Identity = 159/433 (36.72%), Postives = 235/433 (54.27%), Query Frame = 1
Query:    7 DEGCSIVLDVGSGSTKIGYSGDDLPLSVLPSVIVSAAPVSDSRDTPSRAQRPECRECYRGYDSLHPEDHATRDIWPVQKGQCQSTADLETLLHNVFRTEL----GSGAEAQRPVLLTESPSTTRARRAEAAELLFEGLKAPALSMCNTASLSLFAAGRTRGLVVECGAGAAHAVPVFEGYALAHAALRVDAAGRDVTLRLAQLLQQQHGSSGGSGXXXGGSAPLSLDVVRAIKERMCHVLPRGXXXXXXXXXXXXXXXXXXADMKYELPDGSIVRISGECAAEPA-EVLFEN-----------KHGRGGLASAAAAAIAMCDEQVRTDLRGAVVLSGGTTMLPGFCERFAQELEAAIDGGSGGAAPAADGLVRRPLTVVPHARAREPGYTAQRKYAAWIGGSIVASLSTFRLLQVSRQEYEDAGAGALHRRCL 1257
            +EGC  V+D GS S K+GYSG+D P S+ P++      V D     S ++RPE R+   G +SL           P+Q+ +      +E +  ++F TEL     +G  +  PVL+TE P      R + A+LLFE  KAPA+++CN+ +LSLFA+GRTRG+V+ECG+G   AVP+FEG++L HA LR+D  G+DVT R+  +L ++                L +D  R IKE++ H+                         ++ELPDGS++ +  EC    A ++LF                  GLA+    +I MCD+ ++ DL  +VVLSGG+TM PGF ER  ++LE+ +  G+               +VVP +R  E GY++QRK+AAWIGGS+  SL T + + VSRQE+ED G   +H++ L
Sbjct:    5 EEGC-FVVDAGSSSVKVGYSGEDSPRSIFPAI------VDDPVLLLSFSRRPEARD--GGDESLQ---------HPIQRSRVTDWDKMERMFDHMFDTELHVYPDNGMGSGTPVLMTEPPLVEYKAREKMAQLLFETFKAPAIALCNSGTLSLFASGRTRGVVLECGSGTTSAVPIFEGFSLNHATLRLDVGGQDVTQRMHSMLTERK------------RMDLPMDSARVIKEKLAHI-------------STDTPVQQEPPAEFELPDGSVITVDSECRNRCATDLLFPAISPESLDLSLAAQPDNGLAALVQKSILMCDKDLQPDLFNSVVLSGGSTMFPGFSERLRRDLESVVMPGT-------------EFSVVPDSRQAERGYSSQRKHAAWIGGSMFGSLETAKHVFVSRQEWEDIGESVVHKKSL 381          
BLAST of jgi.p|Trimin1|165894 vs. uniprot
Match: F0Y9N8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9N8_AURAN)

HSP 1 Score: 241 bits (614), Expect = 3.290e-72
Identity = 177/440 (40.23%), Postives = 234/440 (53.18%), Query Frame = 1
Query:    1 MEDEGCSIVLDVGSGSTKIGYSGDDLPLSVLPSVIVSAAPVSDSRDTPSRAQRPECRECYRGYDSLHPEDHATRDIWPVQKGQCQSTADLETLLHNVFRTEL---------GSGAEAQRPVLLTESPSTTRARRAEAAELLFEGLKAPALSMCNTASLSLFAAGRTRGLVVECGAGAAHAVPVFEGYALAHAALRVDAAGRDVTLRLAQLLQQQHGSSGGSGXXXGGSAPLSLDVVRAIKERMCHVLP--------------RGXXXXXXXXXXXXXXXXXXADMKYELPDGSIVRISGECAAEPAEVLFENKHGRGGLASAAAAAIAMCDEQVRTDLRGAVVLSGGTTMLPGFCERFAQELEAAIDGGSGGAAPAADGLVRRPLTVVPHARAREPGYTAQRKYAAWIGGSIVASLSTFRLLQVSRQEYEDAGAGALHRR 1251
            ME   C IV+D GS S K GYSG+D P SV PS++      + S    S  +RPE  EC+    + HP  H       V +G  +    +E L    F  EL           GA     VLL E+P T  A R  AA+++FE  K PAL   N+ASLSLFA+GRTRG+V+E GAG +HAVPVFEG+ALAHA LR + AG+DVT  LA  L++               + L  +VVR +KE++C   P                   XX XXXXXXXX    AD++YELPDG++V+++G       +VLF  +  +  L    A +I MCD   + DLRGAVVL+GGTTMLPGFC+R   EL A                      ++P       G+   RK+AAWIGGS+ ASL TF+ +++ +QE+ED     +HR+
Sbjct:    1 MEVGDC-IVIDAGSASVKAGYSGEDTPRSVFPSILDEGGAEALSGLARSGGRRPESVECHFENAAQHPIQHGL-----VAEGNWEK---MERLWDVTFGRELHQYPEGSSASGGAHGGLSVLLAEAPGTPAAARERAAQIMFETFKVPALCFFNSASLSLFASGRTRGVVLESGAGVSHAVPVFEGFALAHAVLRSELAGQDVTSALAANLRRT-------------GSTLGFNVVRDMKEKLCRAQPLAQPGTPAAPGPDGAAAPPXXAXXXXXXXXGAAFADVEYELPDGTMVKVAGAWRGAAPQVLFGGRADQLALPQLVAQSIGMCDRDFQPDLRGAVVLAGGTTMLPGFCDRMKAELSA----------------------ILPE------GHLRVRKFAAWIGGSMFASLETFKQVRIMKQEWED-DESIIHRK 389          
BLAST of jgi.p|Trimin1|165894 vs. uniprot
Match: A0A5D6XT44_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XT44_9STRA)

HSP 1 Score: 230 bits (586), Expect = 9.320e-68
Identity = 161/434 (37.10%), Postives = 232/434 (53.46%), Query Frame = 1
Query:    1 MEDEGCSIVLDVGSGSTKIGYSGDDLPLSVLPSVI-VSAAPVSDSRDTPSRAQRPECRECYRGYDSLHPEDHATRDIWPVQKGQCQSTADLETLLHNVFRTELGSGAEAQR-PVLLTESPSTTRARRAEAAELLFEGLKAPALSMCNTASLSLFAAGRTRGLVVECGAGAAHAVPVFEGYALAHAALRVDAAGRDVTLRLAQLLQQQHGSSGGSGXXXGGSA--PLSLDVVRAIKERMCHVLPRGXXXXXXXXXXXXXXXXXXADMKYELPDGSIVRISGECAAEPAEVLFE-----NKHGR---GGLASAAAAAIAMCDEQVRTDLRGAVVLSGGTTMLPGFCERFAQELEAAIDGGSGGAAPAADGLVRRP---LTVVPHARAREPGYTAQRKYAAWIGGSIVASLSTFRLLQVSRQEYEDAGAGALHRRCL 1257
            M D+  ++VLD GSG  K G++G+D P +V  + + V+  P   +   P+     E RE + G +     +     + P+ +G  +    LE +  +VF  EL    E    P+L T SPS ++ ++   A+L+FE  K       +  +LSLFA+GRTRGLVVE G GA+HAVP+FEGYAL HAAL     G D++ RL +LL ++            G A     L  + AIKE +C V  +G                      +ELPDG+++ +  +  + PA+VLF      ++H R    GL   AA AIAMCD+ ++TDLR AVVL+GGTTMLPGF +RF  EL     G +G   PA           + VVP    RE GY +QR+ AAW+GGS++ASL TFR + +++QE+++     L R+C 
Sbjct:    1 MGDDMEAVVLDNGSGVVKAGFAGEDTPRAVFAACVGVAKNPEWLATQQPTLKAAVELRESFVGAECQQLRE-VLDVVHPITRGVVEDWDALERIWEHVFTHELRVNPETTTLPILCTSSPSGSKQQQERMAQLMFESQKVCGFYFMHQCALSLFASGRTRGLVVEVGHGASHAVPIFEGYALPHAALACGVGGVDISHRLHKLLAKR------------GHAFHAFQLHTIDAIKEAVCVV--QGGRRDDWAQSDRDAAASSSIPKPFELPDGTVLHVDRQTRSLPADVLFRPQELGDEHPRKPTNGLHECAAEAIAMCDKDLQTDLRAAVVLAGGTTMLPGFSQRFQDELL----GATGRRLPAGGXXXXXXXXAVRVVPDPHVRERGYNSQRRVAAWVGGSMLASLGTFRDMHITKQEWDEYHEAILDRKCF 415          
BLAST of jgi.p|Trimin1|165894 vs. uniprot
Match: H3G988_PHYRM (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=H3G988_PHYRM)

HSP 1 Score: 223 bits (567), Expect = 3.680e-65
Identity = 166/435 (38.16%), Postives = 225/435 (51.72%), Query Frame = 1
Query:   19 SIVLDVGSGSTKIGYSGDDLPLSVL---------PSVIVSAAP--VSDSRDTPSRAQRPECRECYRGYDSLHPEDHATRDIWPVQKGQCQSTADLETLLHNVFRTELGSGAE-AQRPVLLTESPSTTRARRAEAAELLFEGLKAPALSMCNTASLSLFAAGRTRGLVVECGAGAAHAVPVFEGYALAHAALRVDAAGRDVTLRLAQLLQQQHGSSGGSGXXXGGSAPLSLDVVRAIKERMCHVLPRGXXXXXXXXXXXXXXXXXXADMKYELPDGSIVRISGECAAEPAEVLFENK--------HGRGGLASAAAAAIAMCDEQVRTDLRGAVVLSGGTTMLPGFCERFAQELEAAID--GGSGGAAPAADGLVRRPLTVVPHARAREPGYTAQRKYAAWIGGSIVASLSTFRLLQVSRQEYEDAGAGALHRRCL 1257
            +IVLD GSG  K G+SG+D P +           P    S AP   ++ RD          RE + G +     D       P+ +G  +    LE +   VF  EL    E A  PVL   SPS  + ++   A+L+FE  KA          LSLFA+GRTRGLVVE G G++HA+P+FEGYAL HAAL  +A G D++ RL  LL  + G S  S           L  +  IKE  C V+  G                  A+  +ELPDG+I+++     A PAE+LF+ +        H   GL   AAA+IAMCD+ +++DL  AVVL+GGTTMLPGF +RF  EL+AA+   GG+G             + V+P    RE GY +QRK AAW+GGS+ ASL TFR + +++QE+E+     L R+C 
Sbjct:    3 AIVLDNGSGILKAGFSGEDTPRTTFTTCTGRVKNPEWFASQAPNWKAELRD----------REMFVGTECQLYRDFLELSN-PISRGIVEDWDALERVWEFVFAQELRVDPETAALPVLCISSPSAPKKQQERMAQLMFESQKACGFYFMQQCVLSLFASGRTRGLVVEVGHGSSHAIPIFEGYALPHAALHYNAGGMDISHRL-HLLLSKRGVSFHS---------FPLHTIDEIKESTC-VMGDGTNQQGQNQQNE-------ANKPFELPDGTILQVDRHTQATPAEILFKPQELGDEHPMHPDKGLHECAAASIAMCDKDLQSDLLSAVVLAGGTTMLPGFSQRFQDELQAALQRTGGNGN------------VNVIPDPVVRERGYNSQRKIAAWVGGSMFASLDTFRDIHITKQEWEEYHEAILDRKCF 396          
BLAST of jgi.p|Trimin1|165894 vs. uniprot
Match: A0A7J7YV70_PIPKU (Actin beta like 2 n=1 Tax=Pipistrellus kuhlii TaxID=59472 RepID=A0A7J7YV70_PIPKU)

HSP 1 Score: 219 bits (557), Expect = 6.480e-64
Identity = 157/428 (36.68%), Postives = 214/428 (50.00%), Query Frame = 1
Query:    4 EDEGCSIVLDVGSGSTKIGYSGDDLPLSVLPSVIV-----SAAPVSDSRDT--PSRAQRPECRECYRGYDSLHPEDHATRDIWPVQKGQCQSTADLETLLHNVFRTELGSGAEAQRPVLLTESPSTTRARRAEAAELLFEGLKAPALSMCNTASLSLFAAGRTRGLVVECGAGAAHAVPVFEGYALAHAALRVDAAGRDVTLRLAQLLQQQ-HGSSGGSGXXXGGSAPLSLDVVRAIKERMCHVLPRGXXXXXXXXXXXXXXXXXXADMKYELPDGSIVRISGECAAEPAEVLFENKHG--RGGLASAAAAAIAMCDEQVRTDLRGAVVLSGGTTMLPGFCERFAQELEAAIDGGSGGAAPAADGLVRRPLTVVPHARAREPGYTAQRKYAAWIGGSIVASLSTFRLLQVSRQEYEDAGAGALHRRCL 1257
            + E  ++VLD GSG  K G+ GD  P +  P V+       A      RD      AQR       RG  SL           PV+ G     A +E + H+ F +EL    E + PVLLTE+P   RA R   A+++FE   APA+ +   A+LSL+AAGRT G+V +CG G  H VPV+EGYAL HA  R+D AGRD+T  LAQLL+++ HG S               ++VR  KER+C+V                       +  YELPDG ++ +  E    P  +   +  G    G+ +AAA A+  CD  +R DL    VLSGG+T+ PG  ER  QE+     GG           VR  +   P           +RKY+ W+GG+I+ASLSTFR + +SRQEY++AG   +HR+C 
Sbjct:    3 DSERAAVVLDSGSGVCKAGFGGDAAPRAAFPCVVGRPRHRGALVGMGQRDAYVGDEAQR------RRGVLSLRR---------PVRHGVVADWAAMEQVWHHAFHSELRVAPE-EHPVLLTEAPLNPRAHRERMAQIMFEAFGAPAVYVAVQAALSLYAAGRTTGVVTDCGDGVTHTVPVYEGYALPHAVQRLDLAGRDLTDYLAQLLRERGHGLS----------TTAEREIVRDAKERLCYVA------LDFEQETAGAAADPALERSYELPDGRVIAVGSERFRCPEALFRPSLLGLEAPGIHAAAAGAVLRCDVDLRRDLFANAVLSGGSTLFPGLAERLRQEVAGLAPGG-----------VRVKVIAPP-----------ERKYSVWVGGAILASLSTFRQMWISRQEYDEAGPPVVHRKCF 376          
BLAST of jgi.p|Trimin1|165894 vs. uniprot
Match: A0A1V9ZFK9_9STRA (Actin-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZFK9_9STRA)

HSP 1 Score: 217 bits (553), Expect = 3.520e-63
Identity = 157/435 (36.09%), Postives = 218/435 (50.11%), Query Frame = 1
Query:    7 DEGCSIVLDVGSGSTKIGYSGDDLPLSVLPSVIVSAAPVSDSRDTPSRAQ---------RPECRECYRGYDSLHPEDHATRDIWPVQKGQCQSTADLETLLHNVFRTELGSGAEA-QRPVLLTESPSTTRARRAEAAELLFEGLKAPALSMCNTASLSLFAAGRTRGLVVECGAGAAHAVPVFEGYALAHAALRVDAAGRDVTLRLAQLLQQQHGSSGGSGXXXGGSAPLSLDVVRAIKERMCHVLPRGXXXXXXXXXXXXXXXXXXADMKYELPDGSIVRISGECAAEPAEVLFE-----NKH---GRGGLASAAAAAIAMCDEQVRTDLRGAVVLSGGTTMLPGFCERFAQELEAAIDGGSGGAAPAADGLVRRPLTVVPHARAREPGYTAQRKYAAWIGGSIVASLSTFRLLQVSRQEYEDAGAGALHRRCL 1257
            DE  ++V+D GSGS K+G+SG+D P  +             S  TP   +         +P+ R+ + G D     +H    I PV +G       +E +   +F  EL    EA   PVL T SP T +A+ A+ A+L+FE  KA A     T  LSLFA+GRTRG+VVE G G++HAVP+FEGYAL HA L +   G D+T  L  LL +       SG       P    +   +KE  C+ +                     A+  +ELPDGSI+ I+ EC A+  +VLFE     + H       L      +I+MCD+ ++ DLRGAVVL+GGTTM+PG  +R   EL                 L    + +VP    RE GY   R+ AAWIGGS+ ASL TF+ +Q++RQE+E++    L R+C 
Sbjct:    2 DEVGAVVVDTGSGSVKVGFSGEDTPRGIF----------QTSLGTPRNPEWLLAHHGGLKPD-RDYFVGKDCAAVREHL-EVIDPVVRGTVTDWEAMEKVWDYMFEHELRMNPEAVNMPVLSTMSPPTAKAQLAKTAQLMFESYKATAFYSMQTCVLSLFASGRTRGIVVEAGHGSSHAVPIFEGYALPHATLHLPVGGFDITKHLELLLAK-------SGHSLKSFHP---SIFSDMKESHCYTVSGNTAPPHE------------ANKPFELPDGSIITINSECRAKATDVLFEATTLPDDHPARNSKSLPDLIVQSISMCDKDLQHDLRGAVVLAGGTTMIPGLSKRLHDELRPR--------------LRESDIRLVPDYETRERGYNTHRRMAAWIGGSMFASLPTFKDIQITRQEWEESHEAILDRKCF 388          
BLAST of jgi.p|Trimin1|165894 vs. uniprot
Match: A0A7S3JZT1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JZT1_9STRA)

HSP 1 Score: 214 bits (546), Expect = 1.840e-62
Identity = 147/407 (36.12%), Postives = 204/407 (50.12%), Query Frame = 1
Query:   22 IVLDVGSGSTKIGYSGDDLPLSVLPSVIVSAAPVSDSRDTPSRAQRPECRECYRGYDSLHPEDHATRDIWPVQKGQCQSTADLETLLHNVFRTELGSGAEAQRPVLLTESPSTTRARRAEAAELLFEGLKAPALSMCNTASLSLFAAGRTRGLVVECGAGAAHAVPVFEGYALAHAALRVDAAGRDVTLRLAQLLQQQHGSSGGSGXXXGGSAPLSLDVVRAIKERMCHVLPRGXXXXXXXXXXXXXXXXXXADMKYELPDGSIVRISGECAAEPAEVLF---ENKHGRGGLASAAAAAIAMCDEQVRTDLRGAVVLSGGTTMLPGFCERFAQELEAAIDGGSGGAAPAADGLVRRPLTVVPHAR---AREPGYTAQRKYAAWIGGSIVASLSTFRLLQVSRQEYED 1224
            +VLDVGS + K GY+G+D PL V PS I S + + +S+ +PS                         D++PV++G  +    +E+L   V   EL         VL+ E P  + A R + A L+FE  K P++   N+A+LSLFA+GRTRGLV++ G G +HAVP+FEG+ALAHA  R   AG D+T+  A       G++          + +   +   IKER+C V                         +YELPDGSI+  S        E+LF   E       L    A +IA+CD  ++ D+R AVVL+GGTTMLPGFC R  +EL       +              L V+P        E GY +QRK+AAWIGGS+ ASL TF  ++V +QE+ED
Sbjct:    1 VVLDVGSATVKAGYAGEDSPLCVFPSTIESKS-IQNSQISPSW------------------------DMYPVRRGVVEDWGKMESLWSQVLEDELRWSEGYS--VLICEGPDASIASRTKTAHLMFEKFKVPSICFFNSAALSLFASGRTRGLVLDVGGGVSHAVPIFEGFALAHAVKRAQIAGHDITMSFAAAGLSSPGNT----------SQVPFILANEIKERLCRVTS------LQHAAQLRKHLQPQQQAEYELPDGSIIEFSTSAQTAAPEILFTASETSSKEEMLPQLIAQSIALCDRDLQADMRSAVVLAGGTTMLPGFCARVKEELVKLFPDDNN-------------LHVIPGPNPTGTSERGYNSQRKHAAWIGGSMFASLDTFDQVRVLKQEWED 351          
BLAST of jgi.p|Trimin1|165894 vs. uniprot
Match: M2W5E2_GALSU (Actin n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W5E2_GALSU)

HSP 1 Score: 213 bits (543), Expect = 7.510e-62
Identity = 148/426 (34.74%), Postives = 215/426 (50.47%), Query Frame = 1
Query:    1 MEDEGCSIVLDVGSGSTKIGYSGDDLPLSVLPSVIV----SAAPVSDSRDTPSRAQRPECRECYRGYDSLHPEDHATRDIWPVQKGQCQSTADLETLLHNVFRTELGSGAEAQRPVLLTESPSTTRARRAEAAELLFEGLKAPALSMCNTASLSLFAAGRTRGLVVECGAGAAHAVPVFEGYALAHAALRVDAAGRDVTLRLAQLLQQQHGSSGGSGXXXGGSAPLSLDVVRAIKERMCHVLPRGXXXXXXXXXXXXXXXXXXADMKYELPDGSIVRISGECAAEPAEVLFENK---HGRGGLASAAAAAIAMCDEQVRTDLRGAVVLSGGTTMLPGFCERFAQELEAAIDGGSGGAAPAADGLVRRPLTVVPHARAREPGYTAQRKYAAWIGGSIVASLSTFRLLQVSRQEYEDAGAGALHRRCL 1257
            M D+  ++V+D GSG  K G +GDD P SV PS++      A  V   +         + R   RG  SL          +P++ G   +  D+E + H+ F  EL    E + PVLLTE+P   +A R +  +++FE    PA+ +   A LSL+A+GRT G+VV+ G G  H VP++EGYAL HA  R+D AGRD+T  L ++L ++  S          +     ++VR IKE++C+V                       D  YELPDG ++ +  E    P EVLF+         GL + A  +I  CD  +R DL G VVLSGG+TM PG  +R   EL                       +V P +   +     +RKY+ WIGGSI+ASLSTF+ + +++QEYE++G G +HR+C 
Sbjct:    1 MSDDIVALVIDNGSGMVKAGVAGDDAPRSVFPSIVGRPRHQAIMVGMGQKESYVGDEAQSR---RGILSLK---------YPIEHGIVTNWDDMEKIWHHTFYNELRIAPE-EHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVVDSGDGVTHTVPIYEGYALPHAITRIDLAGRDLTDYLMKILTERGYSF---------TTTAEREIVRDIKEKLCYVAS------DFDAEMERSKTPGVIDKTYELPDGQVITVGSERFRCP-EVLFQPSLIGMESEGLHTVAYQSIMKCDMDIRKDLYGNVVLSGGSTMFPGIADRMQTELS----------------------SVSPSSMKIKIVAPTERKYSVWIGGSILASLSTFQQMWITKQEYEESGPGIVHRKCF 375          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|165894 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CCR4_9STRA6.460e-278100.00Actin family n=1 Tax=Tribonema minus TaxID=303371 ... [more]
D8LC05_ECTSI2.490e-9441.88Actin n=1 Tax=Ectocarpus siliculosus TaxID=2880 Re... [more]
A0A7S2S4R5_9STRA1.120e-7336.72Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
F0Y9N8_AURAN3.290e-7240.23Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A5D6XT44_9STRA9.320e-6837.10Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
H3G988_PHYRM3.680e-6538.16Uncharacterized protein n=7 Tax=Phytophthora TaxID... [more]
A0A7J7YV70_PIPKU6.480e-6436.68Actin beta like 2 n=1 Tax=Pipistrellus kuhlii TaxI... [more]
A0A1V9ZFK9_9STRA3.520e-6336.09Actin-like protein n=1 Tax=Achlya hypogyna TaxID=1... [more]
A0A7S3JZT1_9STRA1.840e-6236.12Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
M2W5E2_GALSU7.510e-6234.74Actin n=1 Tax=Galdieria sulphuraria TaxID=130081 R... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_41contigContig_41:126893..128980 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|165894|e_gw1.41.179.1
DescriptionATP binding
COG categoryZ
Max annot lvl2759|Eukaryota
EggNOG OGsCOG5277@1|root,KOG0676@2759|Eukaryota
Evalue4.09e-95
Seed ortholog2880.D8LC05
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionActin family
Ec32 orthologEc-20_003970.1
TranscriptId166216
TrackFilteredModels1
ProteinId165894
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|165894gene_4401Tribonema minus UTEX_B_3156 geneContig_41 126893..128980 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_4401_1exon_4401_1Tribonema minus UTEX_B_3156 exonContig_41 126893..127822 +
exon_4401_2exon_4401_2Tribonema minus UTEX_B_3156 exonContig_41 128651..128980 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_4401CDS_4401Tribonema minus UTEX_B_3156 CDSContig_41 126893..127822 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|165894Trimin1|165894|e_gw1.41.179.1Tribonema minus UTEX_B_3156 polypeptideContig_41 126893..128980 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_4401 ID=mRNA_4401|Name=jgi.p|Trimin1|165894|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1260bp|location=Sequence derived from alignment at Contig_41:126893..128980+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGAGGACGAGGGGTGCTCCATTGTCTTGGACGTGGGGAGCGGCAGCAC
CAAGATCGGCTATTCAGGGGACGATCTGCCATTATCAGTTCTGCCCAGCG
TCATCGTCTCAGCAGCACCGGTGTCAGACAGCAGGGACACCCCCTCCCGA
GCTCAAAGGCCGGAGTGCCGGGAGTGCTACAGGGGATATGATTCCCTGCA
CCCTGAGGACCACGCCACCAGGGACATCTGGCCGGTGCAGAAGGGGCAGT
GCCAGAGCACCGCGGACCTGGAAACCCTGCTGCACAACGTCTTCAGGACG
GAGCTGGGGAGCGGCGCGGAGGCGCAGCGGCCGGTGCTGCTGACGGAGTC
TCCCTCCACGACGCGCGCGCGCCGCGCGGAGGCCGCGGAGCTGCTCTTCG
AGGGCCTCAAGGCGCCAGCGCTCAGCATGTGCAACACGGCGTCGCTCAGC
CTCTTTGCGGCGGGGCGCACGCGCGGCCTCGTCGTCGAGTGCGGCGCCGG
CGCCGCGCACGCCGTGCCCGTGTTCGAGGGCTACGCGCTCGCGCACGCGG
CGCTGCGCGTGGACGCCGCCGGGCGCGATGTCACGCTGCGCCTCGCGCAG
CTGCTGCAGCAGCAGCACGGCAGCAGCGGCGGCAGCGGCAGCGGCAGTGG
GGGCAGCGCTCCGCTGAGCCTGGACGTCGTGCGCGCCATCAAGGAGCGCA
TGTGCCATGTGCTGCCGCGCGGCGGCGGCGGTGCTGCTGCGGAGGAGGAC
ATCGGCGCCGCTGCTGCTGCCGCTGCGGCGGACATGAAGTACGAGCTGCC
GGACGGCAGTATCGTGCGCATCAGCGGCGAGTGCGCGGCGGAGCCAGCGG
AGGTGCTGTTTGAGAACAAGCACGGGCGGGGCGGGCTCGCCTCCGCCGCC
GCCGCGGCGATCGCCATGTGCGACGAGCAGGTGCGCACGGACCTGCGCGG
CGCCGTCGTCCTCTCCGGCGGCACCACCATGCTCCCCGGCTTCTGCGAGC
GCTTCGCGCAGGAGCTGGAGGCCGCGATCGACGGCGGCAGCGGCGGCGCG
GCGCCGGCGGCGGACGGCCTGGTGCGGCGGCCGCTCACGGTCGTGCCGCA
CGCGCGCGCGCGTGAGCCCGGCTACACGGCGCAGCGCAAGTACGCGGCGT
GGATCGGCGGCAGCATCGTCGCGTCGCTGTCGACGTTCCGCCTGCTGCAG
GTGTCGCGGCAGGAGTACGAGGACGCGGGCGCGGGCGCGCTGCACCGGCG
CTGCCTGTAG
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protein sequence of jgi.p|Trimin1|165894

>Trimin1|165894|e_gw1.41.179.1 ID=Trimin1|165894|e_gw1.41.179.1|Name=jgi.p|Trimin1|165894|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=420bp
MEDEGCSIVLDVGSGSTKIGYSGDDLPLSVLPSVIVSAAPVSDSRDTPSR
AQRPECRECYRGYDSLHPEDHATRDIWPVQKGQCQSTADLETLLHNVFRT
ELGSGAEAQRPVLLTESPSTTRARRAEAAELLFEGLKAPALSMCNTASLS
LFAAGRTRGLVVECGAGAAHAVPVFEGYALAHAALRVDAAGRDVTLRLAQ
LLQQQHGSSGGSGSGSGGSAPLSLDVVRAIKERMCHVLPRGGGGAAAEED
IGAAAAAAAADMKYELPDGSIVRISGECAAEPAEVLFENKHGRGGLASAA
AAAIAMCDEQVRTDLRGAVVLSGGTTMLPGFCERFAQELEAAIDGGSGGA
APAADGLVRRPLTVVPHARAREPGYTAQRKYAAWIGGSIVASLSTFRLLQ
VSRQEYEDAGAGALHRRCL*
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mRNA from alignment at Contig_41:126893..128980+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_4401 ID=mRNA_4401|Name=jgi.p|Trimin1|165894|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2088bp|location=Sequence derived from alignment at Contig_41:126893..128980+ (Tribonema minus UTEX_B_3156 )
ATGGAGGACGAGGGGTGCTCCATTGTCTTGGACGTGGGGAGCGGCAGCAC CAAGATCGGCTATTCAGGGGACGATCTGCCATTATCAGTTCTGCCCAGCG TCATCGTCTCAGCAGCACCGGTGTCAGACAGCAGGGACACCCCCTCCCGA GCTCAAAGGCCGGAGTGCCGGGAGTGCTACAGGGGATATGATTCCCTGCA CCCTGAGGACCACGCCACCAGGGACATCTGGCCGGTGCAGAAGGGGCAGT GCCAGAGCACCGCGGACCTGGAAACCCTGCTGCACAACGTCTTCAGGACG GAGCTGGGGAGCGGCGCGGAGGCGCAGCGGCCGGTGCTGCTGACGGAGTC TCCCTCCACGACGCGCGCGCGCCGCGCGGAGGCCGCGGAGCTGCTCTTCG AGGGCCTCAAGGCGCCAGCGCTCAGCATGTGCAACACGGCGTCGCTCAGC CTCTTTGCGGCGGGGCGCACGCGCGGCCTCGTCGTCGAGTGCGGCGCCGG CGCCGCGCACGCCGTGCCCGTGTTCGAGGGCTACGCGCTCGCGCACGCGG CGCTGCGCGTGGACGCCGCCGGGCGCGATGTCACGCTGCGCCTCGCGCAG CTGCTGCAGCAGCAGCACGGCAGCAGCGGCGGCAGCGGCAGCGGCAGTGG GGGCAGCGCTCCGCTGAGCCTGGACGTCGTGCGCGCCATCAAGGAGCGCA TGTGCCATGTGCTGCCGCGCGGCGGCGGCGGTGCTGCTGCGGAGGAGGAC ATCGGCGCCGCTGCTGCTGCCGCTGCGGCGGACATGAAGTACGAGCTGCC GGACGGCAGTATCGTGCGCATCAGCGGCGAGTGCGCGGCGGAGCCAGCGG AGGTGCTGTTTGAGAACAAGCACGGGCGGGGCGGGCTCGCCTCCGCCGCC GCCGCGGCGATCGCCATGTGCGACGAGCAGGTGTGCGTGATGCGTCTGCA TGCTGCTATGTGCAGCCTTTGGTGTAGATGAGATCCATATGCTGTGCTGC CTGACGCAGAAAAAGTACGACTTTGCATGTGCAGCTTCCTTGGTTGTCAT TGCTGAGGCGCAGCTTGGCGTGTGGAGAGGACAGTGCACACGTGCGCTTG GTGCAGCATGTAGACGTGCACAAATACTGTGTCACGCCCGGCAGCAGCAA GCTGGCATTGATGACCACCATCACAGCTGGGTTGAACGGGAATACTGTGC CCACTATCCTGTGCGGCAGCGCTGTGTGCGTGTGTTGGCACCTCTGCAGC TGCGTACAGAGCTGCGAACTGTCGCCGTGGTCTTCAGCGGCAAAAGTGTG CTGCATGCTCATCGCGCAGCCCAAAAACGATGCAAAGCGCCATCACGGCA CGGCGGACAGCTTGCCCGTTGCGTTGAGGTAAGCAGCTCGCAAGTGCCAT GCTCCTTGCCACAGGCGCGCACGTACACCTGCGCGCACCTTTGCCGCTGC AGCTGCTGCCAGACACGCACGCGCAGTGCAGGCTTACACTCTGCCATCCG GCACGGCACACTGGAAGAGCTGGCACCATCTCTTAGTTGCATCGAAGTGC ACATGGCCCCACTGTCCAGTCGCACTCACGCCGCAGATGCCGTGGGCCCA TGAAACAAGTCATCCTCCTGTGCGCTCGTTCGCACGGAGCTCCGCTTTCC ACGCCGCGCTCGTGCGCGTCGGTCCGCGCGACCACCGTGCCTATTAAACC TAACCACAACCCTAACCCCAAACCCTAAACTTACCCCCCCCCCCCCCCCA CCCCCCAGGTGCGCACGGACCTGCGCGGCGCCGTCGTCCTCTCCGGCGGC ACCACCATGCTCCCCGGCTTCTGCGAGCGCTTCGCGCAGGAGCTGGAGGC CGCGATCGACGGCGGCAGCGGCGGCGCGGCGCCGGCGGCGGACGGCCTGG TGCGGCGGCCGCTCACGGTCGTGCCGCACGCGCGCGCGCGTGAGCCCGGC TACACGGCGCAGCGCAAGTACGCGGCGTGGATCGGCGGCAGCATCGTCGC GTCGCTGTCGACGTTCCGCCTGCTGCAGGTGTCGCGGCAGGAGTACGAGG ACGCGGGCGCGGGCGCGCTGCACCGGCGCTGCCTGTAG
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Coding sequence (CDS) from alignment at Contig_41:126893..128980+

>mRNA_4401 ID=mRNA_4401|Name=jgi.p|Trimin1|165894|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1260bp|location=Sequence derived from alignment at Contig_41:126893..128980+ (Tribonema minus UTEX_B_3156 )
ATGGAGGACGAGGGGTGCTCCATTGTCTTGGACGTGGGGAGCGGCAGCAC
CAAGATCGGCTATTCAGGGGACGATCTGCCATTATCAGTTCTGCCCAGCG
TCATCGTCTCAGCAGCACCGGTGTCAGACAGCAGGGACACCCCCTCCCGA
GCTCAAAGGCCGGAGTGCCGGGAGTGCTACAGGGGATATGATTCCCTGCA
CCCTGAGGACCACGCCACCAGGGACATCTGGCCGGTGCAGAAGGGGCAGT
GCCAGAGCACCGCGGACCTGGAAACCCTGCTGCACAACGTCTTCAGGACG
GAGCTGGGGAGCGGCGCGGAGGCGCAGCGGCCGGTGCTGCTGACGGAGTC
TCCCTCCACGACGCGCGCGCGCCGCGCGGAGGCCGCGGAGCTGCTCTTCG
AGGGCCTCAAGGCGCCAGCGCTCAGCATGTGCAACACGGCGTCGCTCAGC
CTCTTTGCGGCGGGGCGCACGCGCGGCCTCGTCGTCGAGTGCGGCGCCGG
CGCCGCGCACGCCGTGCCCGTGTTCGAGGGCTACGCGCTCGCGCACGCGG
CGCTGCGCGTGGACGCCGCCGGGCGCGATGTCACGCTGCGCCTCGCGCAG
CTGCTGCAGCAGCAGCACGGCAGCAGCGGCGGCAGCGGCAGCGGCAGTGG
GGGCAGCGCTCCGCTGAGCCTGGACGTCGTGCGCGCCATCAAGGAGCGCA
TGTGCCATGTGCTGCCGCGCGGCGGCGGCGGTGCTGCTGCGGAGGAGGAC
ATCGGCGCCGCTGCTGCTGCCGCTGCGGCGGACATGAAGTACGAGCTGCC
GGACGGCAGTATCGTGCGCATCAGCGGCGAGTGCGCGGCGGAGCCAGCGG
AGGTGCTGTTTGAGAACAAGCACGGGCGGGGCGGGCTCGCCTCCGCCGCC
GCCGCGGCGATCGCCATGTGCGACGAGCAGGTGCGCACGGACCTGCGCGG
CGCCGTCGTCCTCTCCGGCGGCACCACCATGCTCCCCGGCTTCTGCGAGC
GCTTCGCGCAGGAGCTGGAGGCCGCGATCGACGGCGGCAGCGGCGGCGCG
GCGCCGGCGGCGGACGGCCTGGTGCGGCGGCCGCTCACGGTCGTGCCGCA
CGCGCGCGCGCGTGAGCCCGGCTACACGGCGCAGCGCAAGTACGCGGCGT
GGATCGGCGGCAGCATCGTCGCGTCGCTGTCGACGTTCCGCCTGCTGCAG
GTGTCGCGGCAGGAGTACGAGGACGCGGGCGCGGGCGCGCTGCACCGGCG
CTGCCTGTAG
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