Trimin1|349274|estExt_Genemark1.C_Ctg_400073 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|349274
Unique NameTrimin1|349274|estExt_Genemark1.C_Ctg_400073
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length268
Homology
BLAST of jgi.p|Trimin1|349274 vs. uniprot
Match: A0A835YUX2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUX2_9STRA)

HSP 1 Score: 491 bits (1264), Expect = 7.990e-175
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 0
Query:    1 MERAPPPAPTGLANYQDMMRMVFTSMAGRRLLPKEGWGLNRAIRDTAAPTVSVHVKRAPLKADSTSCTILHGLLEDSARRLVVKLTMEGDFTSVQERPLSLPPSLVSLYLNGFRGLRELDLVAFPQLDELPPGLRFLKLRNHDHPLPPLXXXXXXXXXXXXXXXXXXXXXXXRSLSLYWLPPNPAPPLPTRWPAHLERLMYWAKSDGAPMPVIKRLPPTLRELALNGCEVHASLPRTLQKVRLGRNFTQQLTFTGRVTVNSNDNWYF 267
            MERAPPPAPTGLANYQDMMRMVFTSMAGRRLLPKEGWGLNRAIRDTAAPTVSVHVKRAPLKADSTSCTILHGLLEDSARRLVVKLTMEGDFTSVQERPLSLPPSLVSLYLNGFRGLRELDLVAFPQLDELPPGLRFLKLRNHDHPLPPLXXXXXXXXXXXXXXXXXXXXXXXRSLSLYWLPPNPAPPLPTRWPAHLERLMYWAKSDGAPMPVIKRLPPTLRELALNGCEVHASLPRTLQKVRLGRNFTQQLTFTGRVTVNSNDNWYF
Sbjct:    1 MERAPPPAPTGLANYQDMMRMVFTSMAGRRLLPKEGWGLNRAIRDTAAPTVSVHVKRAPLKADSTSCTILHGLLEDSARRLVVKLTMEGDFTSVQERPLSLPPSLVSLYLNGFRGLRELDLVAFPQLDELPPGLRFLKLRNHDHPLPPLXXXXXXXXXXXXXXXXXXXXXXXRSLSLYWLPPNPAPPLPTRWPAHLERLMYWAKSDGAPMPVIKRLPPTLRELALNGCEVHASLPRTLQKVRLGRNFTQQLTFTGRVTVNSNDNWYF 267          
BLAST of jgi.p|Trimin1|349274 vs. uniprot
Match: A0A835YTI8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTI8_9STRA)

HSP 1 Score: 274 bits (700), Expect = 1.620e-87
Identity = 142/241 (58.92%), Postives = 164/241 (68.05%), Query Frame = 0
Query:   19 MRMVFTSMAGRRLLPKEGWGLNRAIRDTAAPTVSVHVKRAPLKADSTSCTILHGLLEDSARRLVVKLTMEGDFTSVQERPLSLPPSLVSLYLNGFRGLRELDLVAFPQLDELPPGLRFLKLRNHDHPLPPLXXXXXXXXXXXXXXXXXXXXXXXRSLSLYWLPPNPAPPLPTRWPAHLERLMYWAKSDGAPMPVIKRLPPTLRELALNGCEVHASLPRTLQKVRLGRNFTQQLTFTGRVTV 259
            MR VFTSMAGRRLLPKEGW LNR I DTAAPTV     +A ++AD+    I H LLED++RR ++ L MEGDFT +QERPLSLPPSLV L LNGFRGLREL+L+ FPQLDE+PPGLR LKL  ++HPLPPL                       RSLSLYW PP PAPPLP RWP HLERL YWA+ + A              L LNGC VH  LP+ L+++RLG  FTQ+LTFTGRVT+
Sbjct:    1 MRRVFTSMAGRRLLPKEGWSLNRVIHDTAAPTV-----KARVEADTVLFAIQHRLLEDTSRRFILDLIMEGDFTRIQERPLSLPPSLVRLELNGFRGLRELELLEFPQLDEVPPGLRVLKLHTYEHPLPPLPDTLETLVLDNCTHHVVDVPDSVRSLSLYWRPPEPAPPLPARWPPHLERLAYWARCEDA-------------ALELNGCVVHTCLPQNLREMRLGSEFTQRLTFTGRVTL 223          
BLAST of jgi.p|Trimin1|349274 vs. uniprot
Match: A0A836CCC0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCC0_9STRA)

HSP 1 Score: 205 bits (521), Expect = 2.940e-59
Identity = 137/318 (43.08%), Postives = 157/318 (49.37%), Query Frame = 0
Query:    8 APTGLANYQDMMRMVFTSMAGRRLLPKEGWGLNRAIRDTAAPTVSVHVKRAPLKADSTSCTILHGLLEDSARRLVVKLTMEGDFTSVQERPLSLPPSLVSLYLNGFR----------------------------------------GLRELDLVAF---------------PQLDELPPGLRFLKLRNHDHPLPPLXXXXXXXXXXXXXXXXXXXXXXXRSLSLYWLPPNPAPPLPTRWPAHLERLMYWAK--SDGAPMPVIKRLPPTLRELALNGCEV-HASLPRTLQKVRLGRNFTQQLT-----FTGRVTVNSN 262
            APT  AN+ ++MR VFTSMAGRRLLPKE W LNRAI DTAAPTV VH     L A S S  I H LLE   RRL+V LTMEGDFT +Q  PLSLPPSLV L L GFR                                        GL  L + A                P+L +LPPGLR LKLR ++HPLPPL                            + L   PAPPLP  WPAHLE L+YWA   SD      +  LP TL  L LNGC V   ++P+TLQ++RLGR            FTG + +NSN
Sbjct:  215 APTAPANHHEIMRRVFTSMAGRRLLPKESWSLNRAIHDTAAPTVEVH-----LVAGSASPAIAHCLLEGIVRRLIVNLTMEGDFTKIQAHPLSLPPSLVRLSLRGFRVHWQDLIALLSPAVANVEVHSCLFASDIRSHAVTILSLPEGLSSLQMAACNTVSSGRVIFSRAPTPELADLPPGLRVLKLRAYEHPLPPLP---------------------------HTLETLPAPPLPDDWPAHLEHLVYWATAASDSEDRAWVDHLPLTLTRLELNGCAVLDGAVPQTLQELRLGRELRHAFDLDVKKFTGTIKINSN 500          
BLAST of jgi.p|Trimin1|349274 vs. uniprot
Match: A0A835ZHU4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHU4_9STRA)

HSP 1 Score: 198 bits (504), Expect = 2.930e-58
Identity = 136/354 (38.42%), Postives = 167/354 (47.18%), Query Frame = 0
Query:    2 ERAPPPAPTGLANYQDMMRMVFTSMAGRRLLPKEGWGLNRAIRDTAAPTVSVHVKRAPLKADSTSCTILHGLLEDSARRLVVKLTMEGDFTSVQERPLSLPPSL------VSLYLNGFRG----------------------------------------------------------------------------------LRELDLVAFPQLDELPPGLRFLKLRNHDHPLPPLXXXXXXXXXXXXXXXXXXXXXXXRSLSLYWLPPNPAPPLPTRWPAHLERLMYWA----KSDGAPMPVIKR-LPPTLRELALNGCEVHASLPRTLQKVRLGRNFTQQLTFTG--RVTVN 260
            ER   PAP G  + Q+++ MVFTSMAGRRLLPK+ W L+R + DT AP + VH     L ADS +   LH LLED++RR V +LT++GDFTS+Q+RPL+L P L      V +    F G                                                                                  LR L L  F QL ELPP LR L L+ + +PLP L                       RSL+LYW P  PAPPLP RWPAHLERL+ WA    + D AP P I R LPPTL +L LNGC +   LP+TLQ +RLGR F+Q+L   G  +VTVN
Sbjct:    4 ERIRVPAPAGSLSQQEIVMMVFTSMAGRRLLPKKCWSLSRLLHDTVAPIIKVH-----LVADSINAATLHRLLEDTSRRNVQRLTLDGDFTSMQQRPLNLVPLLSPAVAQVDVAFCSFSGSIEDVLTIPSLPEGVASLSVTAGFSRDVVWAFSKLPQSLRHLIVDATTDVIVFEQPLPTLLESFIVESGGEVHVGAGSLPASLRNLQLWGFQQLYELPPRLRVLMLQRYIYPLPLLPDTLETLVLDYCTHHVSNLPDSVRSLALYWHPAQPAPPLPARWPAHLERLVDWAVGESEPDDAPEPCIDRPLPPTLTQLELNGCSIATDLPQTLQTLRLGRGFSQELDLAGSFKVTVN 352          
BLAST of jgi.p|Trimin1|349274 vs. uniprot
Match: A0A835YUY3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUY3_9STRA)

HSP 1 Score: 196 bits (499), Expect = 5.500e-58
Identity = 114/235 (48.51%), Postives = 134/235 (57.02%), Query Frame = 0
Query:   10 TGLANYQDMMRMVFTSMAGRRLLPKEGWGLNRAIRDTAAPTVSVHVKRAPLKADSTSCTILHGLLEDSARRLVVKLTMEGDFTSVQERPLSLPPSLVSLYLNGFRG--------LRELDLVAF----------PQL-----------------------DELPPGLRFLKLRNHDHPLPPLXXXXXXXXXXXXXXXXXXXXXXXRSLSLYWLPPNPAPPLPTRWPAHLERLMYWA 203
            TG  ++QD++R+VFTSMAGRRLLP+EGW L+RAI DTAAP V V      L+A      + H LLED+AR+L+V+LTMEGDFT +Q RPLSLPPSLV L L GFRG        LR+L L A+          P L                       +ELPP LR LKL  ++HPLPPL                       RSLSLYW PP PAPPLP RWPAHLE L YW+
Sbjct:   80 TGDRSHQDIIRIVFTSMAGRRLLPEEGWSLSRAIHDTAAPIVKVR-----LEAGGVPIAMAHHLLEDTARKLIVELTMEGDFTEIQARPLSLPPSLVQLELAGFRGELGPAPSGLRKLSLCAYCEDGDKIIPHPPLADINDGDAMQNLLQEMAELIRAFNELPPSLRVLKLHKYEHPLPPLPDTLETLVLDECTGHIAQLPNSVRSLSLYWRPPRPAPPLPARWPAHLEHLTYWS 309          
BLAST of jgi.p|Trimin1|349274 vs. uniprot
Match: A0A836CEP4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEP4_9STRA)

HSP 1 Score: 183 bits (465), Expect = 1.620e-52
Identity = 135/263 (51.33%), Postives = 150/263 (57.03%), Query Frame = 0
Query:   26 MAGRRLLPKEGWGLNRAIRDTAAPTVS-VHVKRAPLKADSTSCTILHGLLEDSARRLVVKLTMEGDFTSVQERPLSLPPSLVSLYLNGFRG--------LREL-------------------DLVAFPQLDELPPGLRFLKLRNHDHPLPPLXXXXXXXXXXXXXXXXXXXXXXXRSLSLYWLPPNPAPPLPTRWPAHLERLMYWAKSDGAPMPVIKRLPPTLRELALNGCEVHASLPRTLQKVRLGRNFTQQLTFTGRVTVN 260
            MAGRRLLPKEGW LNRAI DTAAPT     ++  PL   +T             RR ++ LTME                 V L LNG RG        LR                      LV  PQL+ +PPGLR LKLR+++HPLP L   XXXXXXXXXXXXXXXXXXX R LSLYW PP PAPPLP RWP HLERL+YW KS  A  P I  LP TLR+L LNGCEVHA LP+TLQ+VRLG    + LT    V  N
Sbjct:    1 MAGRRLLPKEGWSLNRAIHDTAAPTGDFTSIQERPLSLPATL-----------GRRRIISLTMEXXXXXXXXXXXXXXXXXVRLELNGSRGELGPAPAGLRXXXXXXXXXXXXXXXXXXXXXQLVGSPQLEHVPPGLRALKLRDYEHPLPQLPDTXXXXXXXXXXXXXXXXXXXVRLLSLYWQPPQPAPPLPARWPTHLERLVYWGKSAVAEPPRIAHLPRTLRQLELNGCEVHARLPQTLQRVRLGPTMARSLTEPPSVGKN 252          
BLAST of jgi.p|Trimin1|349274 vs. uniprot
Match: A0A835Z5Y5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5Y5_9STRA)

HSP 1 Score: 173 bits (438), Expect = 2.030e-50
Identity = 111/266 (41.73%), Postives = 136/266 (51.13%), Query Frame = 0
Query:    2 ERAPPPAPTGLANYQDMMRMVFTSMAGRRLLPKEGWGLNRAIRDTAAPTVSVHVKRAPLKADSTSCTILHGLLEDSARRLVVKLTMEGDFTSVQERPLSLPPSLVSLYLNGFRGLRELDLVAFPQLDELPPGLRFLKLRNHDHPLPPLXXXXXXXXXXXXXXXXXXXXXXXRSLSLYWLPPNPAPPLPTRWPAHLERLMYWA--KSDGAPMPVIKR-LPPTLRELALNGCEVHASLPRTLQKVRLGRNFTQQLTFTGRV--TVNSN 262
            ER   PAP G +  Q+++RMVFTSMA RRLLPK+ W L+R + DT AP + VH     L ADST+  ILH LLE ++RR + +LT++GDFTS Q+RPLSLPPSLV L LNGFR                                                                            RWP  LERL+YWA   S  AP P I R LPP L EL LNGC +   LPR LQK++LGR+F+Q+L  TG +  TVNS+
Sbjct:    4 ERIRVPAPAGSSTQQEIVRMVFTSMARRRLLPKKYWSLSRLLHDTVAPMIKVH-----LVADSTNSVILHRLLEGTSRRRIRRLTLDGDFTSTQQRPLSLPPSLVRLELNGFRA---------------------------------------------------------------------------RWPVQLERLVYWAIGVSGDAPEPCIDRPLPPKLTELELNGCSIATHLPRMLQKLKLGRSFSQELCLTGSLIATVNSS 189          
BLAST of jgi.p|Trimin1|349274 vs. uniprot
Match: A0A835YUB3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUB3_9STRA)

HSP 1 Score: 156 bits (394), Expect = 4.340e-43
Identity = 106/154 (68.83%), Postives = 123/154 (79.87%), Query Frame = 0
Query:  115 GLRELDL--VAFPQLDELPPGLRFLKLRNHDHPLPPLXXXXXXXXXXXXXXXXXXXXXXXRSLSLYWLPPNPAPPLPTRWPAHLERLMYWAKS-----DGAPMPVIKRLPPTLRELALNGCEVHASLPRTLQKVRLGRNFTQQLTFTGRVTVNS 261
            GLR LDL   A  QL+ELPPGLR LKL  ++HPL PLXXXXXXXXXXXXXXXXXXXXXXX SL+LYW  P PAPPLP RWPAHLERL+YW+KS       APMP+I+RLPPTLR L LN CE+ A LP+TLQ++R+GR FT ++ FTGRV +N+
Sbjct:   93 GLRVLDLSRCARMQLNELPPGLRVLKLHKYEHPLRPLXXXXXXXXXXXXXXXXXXXXXXXXSLALYWQTPEPAPPLPARWPAHLERLVYWSKSASGEAGSAPMPIIERLPPTLRYLELNRCELRARLPKTLQELRVGREFTDRVDFTGRVVLNA 246          
BLAST of jgi.p|Trimin1|349274 vs. uniprot
Match: A0A835Z4J5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4J5_9STRA)

HSP 1 Score: 155 bits (391), Expect = 2.340e-40
Identity = 158/482 (32.78%), Postives = 190/482 (39.42%), Query Frame = 0
Query:    1 MERAPPPAPTGLANYQDMMRMVFTSMAGRRLLPKEGWGLNRAIRDTAAPTVSVHVKRAPLKADSTSCTILHGLLEDSARRLVVKLTMEGDFTSVQERPLSLPPSLVSLYLNGFRG--------LREL----------DLVAFP------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QLDELPPGLRFLKLRNHDHPLPPLXXXXXXXXXXXXXXXXXXXXXXXRSLSLYWLPPNPAPPLPTRWPAHLERLMYWAKSDGAPMPVIKRLPPTLRELALNGCEVHASLPRTLQKVRLGRNFTQQL---TFTGRV 257
            +ER   PAP    + Q+++RMVFTSMAGRRLLPKE W L+  + DT APT+ VH    P+ ADS    +LH LLED++RR +  LT++GDFTS+Q+RPLSLPPSL  L LNGFRG        LREL          D+V  P                                                                                                                                                                                                             LD +P GLR L LRN+ H     XXXXXXXXXXXXXXXXXXXXXX RSLSLYW P  P PPLP RWP HL+RL+Y  +S  +P+P I+ LPPTL +L LNGCEV  SLP+ L+++ LGR FTQ +    F GRV
Sbjct:    3 VERIRVPAPASSLSQQEIVRMVFTSMAGRRLLPKECWSLSSLLHDTVAPTIEVH----PV-ADSADSAVLHRLLEDTSRRRIRCLTLDGDFTSIQQRPLSLPPSLERLELNGFRGELGAAPSGLRELHLYAGFDRGEDIVPHPLLAELYDSALDSPDDSAIGSEAAWEFVGEMAEIVKAFLPTLRVLVVCGLSQMVSLQALMTKLVETPLPRLQVLSLHNWAVPWEDLLLLLSPVLAKVKLENCLILVLYADIDTPKYTVPALPEGLVSLDLDLCFSHVDLWVFGGLPESLRHLVVVMEGISVRFEAPLPTLLESFRAETLGSGIHIDMGLLPAGLRKLKLAGAEQQPLDRVPAGLRVLMLRNYRHXXXXXXXXXXXXXXXXXXXXXXXXXXXLRSLSLYWRPAFPTPPLPARWPVHLQRLVYCGESHQSPVPGIEHLPPTLGQLTLNGCEVRTSLPQMLEELCLGRQFTQAIDLDNFRGRV 479          
BLAST of jgi.p|Trimin1|349274 vs. uniprot
Match: A0A836CD10_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD10_9STRA)

HSP 1 Score: 153 bits (386), Expect = 3.100e-40
Identity = 85/133 (63.91%), Postives = 97/133 (72.93%), Query Frame = 0
Query:    1 MERAPPPAPTGL-ANYQDMMRMVFTSMAGRRLLPKEGWGLNRAIRDTAAPTVSVHVKRAPLKADSTSCTILHGLLEDSARRLVVKLTMEGDFTSVQERPLSLPPSLVSLYLNGFRG---------LRELDLVA 123
            MERA PPAP+GL  ++QDMMR VFTSMAGRRLLPKEGW LNRAI DTAAPTV   + RA + A S    + H LLED+ RRLVV+L ++GDFT++QERPLSLPP LV L L GFRG         LREL L A
Sbjct:    1 MERARPPAPSGLFTDHQDMMRRVFTSMAGRRLLPKEGWSLNRAIHDTAAPTVMYRLYRARVGAGSAPLALPHRLLEDTRRRLVVQLLIDGDFTNIQERPLSLPPFLVRLELYGFRGELGPPPSGGLRELRLCA 133          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349274 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
A0A835YUX2_9STRA7.990e-175100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YTI8_9STRA1.620e-8758.92Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CCC0_9STRA2.940e-5943.08Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZHU4_9STRA2.930e-5838.42Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YUY3_9STRA5.500e-5848.51Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CEP4_9STRA1.620e-5251.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z5Y5_9STRA2.030e-5041.73Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YUB3_9STRA4.340e-4368.83Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z4J5_9STRA2.340e-4032.78Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CD10_9STRA3.100e-4063.91Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 82..262
e-value: 9.4E-8
score: 32.8
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 101..235

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_40contigContig_40:648951..650372 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349274mRNA_8086Tribonema minus UTEX_B_3156 mRNAContig_40 648951..650456 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|349274|estExt_Genemark1.C_Ctg_400073 ID=Trimin1|349274|estExt_Genemark1.C_Ctg_400073|Name=jgi.p|Trimin1|349274|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=268bp
MERAPPPAPTGLANYQDMMRMVFTSMAGRRLLPKEGWGLNRAIRDTAAPT
VSVHVKRAPLKADSTSCTILHGLLEDSARRLVVKLTMEGDFTSVQERPLS
LPPSLVSLYLNGFRGLRELDLVAFPQLDELPPGLRFLKLRNHDHPLPPLP
DTLETLVLDNCTHHVANIPDSVRSLSLYWLPPNPAPPLPTRWPAHLERLM
YWAKSDGAPMPVIKRLPPTLRELALNGCEVHASLPRTLQKVRLGRNFTQQ
LTFTGRVTVNSNDNWYF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf