Trimin1|165717|e_gw1.40.126.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|165717
Unique NameTrimin1|165717|e_gw1.40.126.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length62
Homology
BLAST of jgi.p|Trimin1|165717 vs. uniprot
Match: A0A835YXB2_9STRA (COX2_CUA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXB2_9STRA)

HSP 1 Score: 124 bits (311), Expect = 3.580e-36
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0
Query:    1 RLNQVSLYLLRKGVFYGQCSEICGVNHGFIPIVVESGLKKLVDKLLMRSMVKFIFGLYLLA 61
            RLNQVSLYLLRKGVFYGQCSEICGVNHGFIPIVVESGLKKLVDKLLMRSMVKFIFGLYLLA
Sbjct:    1 RLNQVSLYLLRKGVFYGQCSEICGVNHGFIPIVVESGLKKLVDKLLMRSMVKFIFGLYLLA 61          
BLAST of jgi.p|Trimin1|165717 vs. uniprot
Match: A0A6M8Q8G5_9FLOR (Cytochrome c oxidase subunit II (Fragment) n=2 Tax=Asparagopsis taxiformis TaxID=260499 RepID=A0A6M8Q8G5_9FLOR)

HSP 1 Score: 69.3 bits (168), Expect = 2.630e-14
Identity = 27/36 (75.00%), Postives = 35/36 (97.22%), Query Frame = 0
Query:    1 RLNQVSLYLLRKGVFYGQCSEICGVNHGFIPIVVES 36
            RLNQ+SL++ R+G++YGQCSEICGVNHGF+PIVVE+
Sbjct:   14 RLNQISLFIKREGIYYGQCSEICGVNHGFMPIVVEA 49          
BLAST of jgi.p|Trimin1|165717 vs. uniprot
Match: UPI001BC20472 (Uncharacterized protein n=1 Tax=Chitinophagaceae bacterium TaxID=1869212 RepID=UPI001BC20472)

HSP 1 Score: 68.6 bits (166), Expect = 3.470e-14
Identity = 28/36 (77.78%), Postives = 33/36 (91.67%), Query Frame = 0
Query:    1 RLNQVSLYLLRKGVFYGQCSEICGVNHGFIPIVVES 36
            RLNQV+LY+ R GVFYGQCSE+CGVNH F+PIVVE+
Sbjct:    7 RLNQVALYITRSGVFYGQCSELCGVNHAFMPIVVEA 42          
BLAST of jgi.p|Trimin1|165717 vs. uniprot
Match: A0A6B7KA03_9FLOR (Cytochrome c oxidase subunit II (Fragment) n=1 Tax=Botryocladia occidentalis TaxID=220759 RepID=A0A6B7KA03_9FLOR)

HSP 1 Score: 68.6 bits (166), Expect = 4.580e-14
Identity = 27/36 (75.00%), Postives = 35/36 (97.22%), Query Frame = 0
Query:    1 RLNQVSLYLLRKGVFYGQCSEICGVNHGFIPIVVES 36
            RLNQVSL++ R+G++YGQCSEICG+NHGF+PIVVE+
Sbjct:    8 RLNQVSLFIKREGLYYGQCSEICGINHGFMPIVVEA 43          
BLAST of jgi.p|Trimin1|165717 vs. uniprot
Match: Q8M2B8_9FLOR (Cytochrome c oxidase subunit 2 (Fragment) n=1 Tax=Caulacanthus ustulatus TaxID=31411 RepID=Q8M2B8_9FLOR)

HSP 1 Score: 68.2 bits (165), Expect = 5.910e-14
Identity = 27/36 (75.00%), Postives = 34/36 (94.44%), Query Frame = 0
Query:    1 RLNQVSLYLLRKGVFYGQCSEICGVNHGFIPIVVES 36
            RLNQ SL++ R+GV+YGQCSEICG+NHGF+PIVVE+
Sbjct:    4 RLNQTSLFIKRQGVYYGQCSEICGINHGFMPIVVEA 39          
BLAST of jgi.p|Trimin1|165717 vs. uniprot
Match: Q6X328_BOSMO (Cytochrome oxidase subunit II (Fragment) n=5 Tax=Bostrychia moritziana TaxID=103713 RepID=Q6X328_BOSMO)

HSP 1 Score: 68.2 bits (165), Expect = 6.060e-14
Identity = 27/36 (75.00%), Postives = 34/36 (94.44%), Query Frame = 0
Query:    1 RLNQVSLYLLRKGVFYGQCSEICGVNHGFIPIVVES 36
            RLNQ SL++ R+GV+YGQCSEICG+NHGF+PIVVE+
Sbjct:    4 RLNQASLFIKREGVYYGQCSEICGINHGFMPIVVEA 39          
BLAST of jgi.p|Trimin1|165717 vs. uniprot
Match: A0A884Q057_9FLOR (Cytochrome oxidase subunit 2 n=14 Tax=Lithophyllum TaxID=48954 RepID=A0A884Q057_9FLOR)

HSP 1 Score: 67.8 bits (164), Expect = 8.020e-14
Identity = 26/36 (72.22%), Postives = 34/36 (94.44%), Query Frame = 0
Query:    1 RLNQVSLYLLRKGVFYGQCSEICGVNHGFIPIVVES 36
            RLNQ SL++ R+G++YGQCSEICG+NHGF+PIVVE+
Sbjct:    2 RLNQTSLFIKREGIYYGQCSEICGINHGFMPIVVEA 37          
BLAST of jgi.p|Trimin1|165717 vs. uniprot
Match: A0A2D6YCP2_9GAMM (COX2_CUA domain-containing protein n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2D6YCP2_9GAMM)

HSP 1 Score: 67.8 bits (164), Expect = 8.210e-14
Identity = 29/36 (80.56%), Postives = 33/36 (91.67%), Query Frame = 0
Query:    1 RLNQVSLYLLRKGVFYGQCSEICGVNHGFIPIVVES 36
            RLNQVS++L R G FYGQCSEICGVNHGF+PIVV+S
Sbjct:   11 RLNQVSVFLKRLGTFYGQCSEICGVNHGFMPIVVKS 46          
BLAST of jgi.p|Trimin1|165717 vs. uniprot
Match: A0A873WRK8_9EUKA (Cytochrome c oxidase subunit 2 n=2 Tax=Cyanophora TaxID=2761 RepID=A0A873WRK8_9EUKA)

HSP 1 Score: 72.0 bits (175), Expect = 1.060e-13
Identity = 31/52 (59.62%), Postives = 43/52 (82.69%), Query Frame = 0
Query:    1 RLNQVSLYLLRKGVFYGQCSEICGVNHGFIPIVVES-GLKKLVDKLLMRSMV 51
            RLNQ+ +++ R+GVFYGQCSEICGVNHGF+PIV+E+  LK  +D +  +S+V
Sbjct:  199 RLNQIGMFIKREGVFYGQCSEICGVNHGFMPIVIEAVNLKNYIDWINTKSLV 250          
BLAST of jgi.p|Trimin1|165717 vs. uniprot
Match: G1FMB0_9FLOR (Cytochrome oxidase subunit 2 (Fragment) n=40 Tax=Rhodymeniophycidae TaxID=2045261 RepID=G1FMB0_9FLOR)

HSP 1 Score: 67.8 bits (164), Expect = 1.070e-13
Identity = 26/36 (72.22%), Postives = 34/36 (94.44%), Query Frame = 0
Query:    1 RLNQVSLYLLRKGVFYGQCSEICGVNHGFIPIVVES 36
            RLNQ SL++ R+G++YGQCSEICG+NHGF+PIVVE+
Sbjct:   14 RLNQASLFIKREGIYYGQCSEICGINHGFMPIVVEA 49          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|165717 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YXB2_9STRA3.580e-36100.00COX2_CUA domain-containing protein n=1 Tax=Tribone... [more]
A0A6M8Q8G5_9FLOR2.630e-1475.00Cytochrome c oxidase subunit II (Fragment) n=2 Tax... [more]
UPI001BC204723.470e-1477.78Uncharacterized protein n=1 Tax=Chitinophagaceae b... [more]
A0A6B7KA03_9FLOR4.580e-1475.00Cytochrome c oxidase subunit II (Fragment) n=1 Tax... [more]
Q8M2B8_9FLOR5.910e-1475.00Cytochrome c oxidase subunit 2 (Fragment) n=1 Tax=... [more]
Q6X328_BOSMO6.060e-1475.00Cytochrome oxidase subunit II (Fragment) n=5 Tax=B... [more]
A0A884Q057_9FLOR8.020e-1472.22Cytochrome oxidase subunit 2 n=14 Tax=Lithophyllum... [more]
A0A2D6YCP2_9GAMM8.210e-1480.56COX2_CUA domain-containing protein n=1 Tax=Legione... [more]
A0A873WRK8_9EUKA1.060e-1359.62Cytochrome c oxidase subunit 2 n=2 Tax=Cyanophora ... [more]
G1FMB0_9FLOR1.070e-1372.22Cytochrome oxidase subunit 2 (Fragment) n=40 Tax=R... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01166CYCOXIDASEIIcoord: 19..36
score: 72.43
coord: 1..18
score: 56.74
IPR008972CupredoxinGENE3D2.60.40.420coord: 1..41
e-value: 8.8E-8
score: 34.0
IPR008972CupredoxinSUPERFAMILY49503Cupredoxinscoord: 1..36
IPR002429Cytochrome c oxidase subunit II-like C-terminalPFAMPF00116COX2coord: 1..36
e-value: 1.1E-14
score: 54.4
IPR002429Cytochrome c oxidase subunit II-like C-terminalPROSITEPS50857COX2_CUAcoord: 1..48
score: 14.530602

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_40contigContig_40:822053..822238 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|165717mRNA_8108Tribonema minus UTEX_B_3156 mRNAContig_40 822053..822238 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|165717|e_gw1.40.126.1 ID=Trimin1|165717|e_gw1.40.126.1|Name=jgi.p|Trimin1|165717|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=62bp
RLNQVSLYLLRKGVFYGQCSEICGVNHGFIPIVVESGLKKLVDKLLMRSM
VKFIFGLYLLA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008972Cupredoxin
IPR002429CcO_II-like_C