Trimin1|349205|estExt_Genemark1.C_Ctg_390010 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|349205
Unique NameTrimin1|349205|estExt_Genemark1.C_Ctg_390010
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length216
Homology
BLAST of jgi.p|Trimin1|349205 vs. uniprot
Match: A0A836CDA8_9STRA (Pyridoxal kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDA8_9STRA)

HSP 1 Score: 421 bits (1083), Expect = 5.760e-149
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0
Query:    1 MLSCLSRRVAPIASLAARSSMHTSNTMRNASPLVMHSSPLRSEHAKAFQATLPEREGRVLSVQSHTVHGYVGNKAATLPLQLLGLEVDPLNTVHFSTHAGYKHLRGDATTAQQFDTLVEGLKINGVFNYDYVLSGYARSEGLLMSLASIVTELRATNGSKDKHAVRYFLDPVLGDDDCGFYVPQELVATYRDAMLPLATVITPNTFEAQQLRRSS 215
            MLSCLSRRVAPIASLAARSSMHTSNTMRNASPLVMHSSPLRSEHAKAFQATLPEREGRVLSVQSHTVHGYVGNKAATLPLQLLGLEVDPLNTVHFSTHAGYKHLRGDATTAQQFDTLVEGLKINGVFNYDYVLSGYARSEGLLMSLASIVTELRATNGSKDKHAVRYFLDPVLGDDDCGFYVPQELVATYRDAMLPLATVITPNTFEAQQLRRSS
Sbjct:    1 MLSCLSRRVAPIASLAARSSMHTSNTMRNASPLVMHSSPLRSEHAKAFQATLPEREGRVLSVQSHTVHGYVGNKAATLPLQLLGLEVDPLNTVHFSTHAGYKHLRGDATTAQQFDTLVEGLKINGVFNYDYVLSGYARSEGLLMSLASIVTELRATNGSKDKHAVRYFLDPVLGDDDCGFYVPQELVATYRDAMLPLATVITPNTFEAQQLRRSS 215          
BLAST of jgi.p|Trimin1|349205 vs. uniprot
Match: A0A1D5PVA2_CHICK (Pyridoxal kinase n=3 Tax=Aves TaxID=8782 RepID=A0A1D5PVA2_CHICK)

HSP 1 Score: 162 bits (409), Expect = 5.280e-47
Identity = 83/162 (51.23%), Postives = 106/162 (65.43%), Query Frame = 0
Query:   53 PEREGRVLSVQSHTVHGYVGNKAATLPLQLLGLEVDPLNTVHFSTHAGYKHLRGDATTAQQFDTLVEGLKINGVFNYDYVLSGYARSEGLLMSLASIVTELRATNGSKDKHAVRYFLDPVLGDDDCG---FYVPQELVATYRDAMLPLATVITPNTFEAQQL 211
            PERE RVLS+QSH V GYVGNKAAT PLQ+LG EVD +N+V FS H GY H +G    + +   L EGLK+N V  YDYVL+GY R    L  +  IV EL+  N +     + Y  DPV+GD   G   +YVP++L+  YRD ++P+A +ITPN FEA+ L
Sbjct:    3 PERECRVLSIQSHVVRGYVGNKAATFPLQVLGFEVDTVNSVQFSNHTGYAHWKGQVLNSDELHELYEGLKLNKVNQYDYVLTGYTRDTSFLAMVVDIVQELKQQNSN-----LVYVCDPVMGDKWNGKAPWYVPKDLLPVYRDKVVPVADIITPNQFEAELL 159          
BLAST of jgi.p|Trimin1|349205 vs. uniprot
Match: A0A7S0E9S0_9EUKA (Pyridoxal kinase (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0E9S0_9EUKA)

HSP 1 Score: 161 bits (408), Expect = 1.600e-46
Identity = 84/156 (53.85%), Postives = 107/156 (68.59%), Query Frame = 0
Query:   57 GRVLSVQSHTVHGYVGNKAATLPLQLLGLEVDPLNTVHFSTHAGYKHLRGDATTAQQFDTLVEGLKINGVFN-YDYVLSGYARSEGLLMSLASIVTELRATNGSKDKHAVRYFLDPVLGDDDCGFYVPQELVATYRDAMLPLATVITPNTFEAQQL 211
            GRVLS+QSHTVHGYVGNK+A  PLQLLG EVDP+N+V FSTH GY   RG+    QQ   LVEGL+ +G+   Y ++L+GY  S   L ++   V  +RA N       + Y+ DPV+GD+    YVP+ELV  YRD +LPLA+V+TPN FEA+QL
Sbjct:   38 GRVLSIQSHTVHGYVGNKSAVFPLQLLGFEVDPINSVQFSTHTGYPGWRGEVMQGQQLTELVEGLRSSGLLRGYSHMLTGYIGSASFLRAVLDTVRAVRAENPE-----MLYYCDPVMGDNG-SLYVPKELVDIYRDEVLPLASVLTPNQFEAEQL 187          
BLAST of jgi.p|Trimin1|349205 vs. uniprot
Match: UPI001261923F (pyridoxal kinase n=1 Tax=Mastomys coucha TaxID=35658 RepID=UPI001261923F)

HSP 1 Score: 159 bits (401), Expect = 4.200e-46
Identity = 81/159 (50.94%), Postives = 103/159 (64.78%), Query Frame = 0
Query:   54 EREGRVLSVQSHTVHGYVGNKAATLPLQLLGLEVDPLNTVHFSTHAGYKHLRGDATTAQQFDTLVEGLKINGVFNYDYVLSGYARSEGLLMSLASIVTELRATNGSKDKHAVRYFLDPVLGDDDCG---FYVPQELVATYRDAMLPLATVITPNTFEAQ 209
            E E RVLS+QSH V GYVGN+ A  PLQ+LG EVD +N+V FS HAGY H +G   T+Q+   L EGLK N V  YDYVL+GY R +  L ++  IV EL+  N       + Y  DPV+GD   G    YVPQ+L+  YRD ++P+A +ITPN FEA+
Sbjct:    2 EGECRVLSIQSHVVRGYVGNRVAMFPLQVLGFEVDAVNSVQFSNHAGYAHWKGQVLTSQELHELYEGLKANSVNKYDYVLTGYTRDKSFLTTVVDIVQELKQQNSK-----LMYVCDPVMGDKWNGEGSMYVPQDLLPVYRDKVVPVADIITPNQFEAE 155          
BLAST of jgi.p|Trimin1|349205 vs. uniprot
Match: A0A7J5Y2F2_DISMA (Pyridoxal kinase n=2 Tax=Perciformes TaxID=8111 RepID=A0A7J5Y2F2_DISMA)

HSP 1 Score: 161 bits (408), Expect = 5.430e-46
Identity = 79/156 (50.64%), Postives = 105/156 (67.31%), Query Frame = 0
Query:   56 EGRVLSVQSHTVHGYVGNKAATLPLQLLGLEVDPLNTVHFSTHAGYKHLRGDATTAQQFDTLVEGLKINGVFNYDYVLSGYARSEGLLMSLASIVTELRATNGSKDKHAVRYFLDPVLGDDDCGFYVPQELVATYRDAMLPLATVITPNTFEAQQL 211
            E RVLS+QSH V GYVGNK+AT PLQ+LG EVD +N+V FS H GY H +G   TA + + L EG+K+N V  YDY+L+GY+R    LM++  I+ EL+  N S     + Y  DPV+GD     YVP+ L+  YRD ++PLA ++TPN FEA+ L
Sbjct:    2 ECRVLSIQSHVVRGYVGNKSATFPLQVLGFEVDSINSVQFSNHTGYSHWKGQVLTADELNVLYEGIKLNKVNRYDYILTGYSRDTSFLMTVVDIIQELKKANPS-----LVYVCDPVMGDQGA-MYVPEYLLPVYRDNVVPLADILTPNQFEAELL 151          
BLAST of jgi.p|Trimin1|349205 vs. uniprot
Match: UPI000907003B (pyridoxal kinase n=1 Tax=Alligator mississippiensis TaxID=8496 RepID=UPI000907003B)

HSP 1 Score: 163 bits (413), Expect = 6.530e-46
Identity = 84/162 (51.85%), Postives = 107/162 (66.05%), Query Frame = 0
Query:   53 PEREGRVLSVQSHTVHGYVGNKAATLPLQLLGLEVDPLNTVHFSTHAGYKHLRGDATTAQQFDTLVEGLKINGVFNYDYVLSGYARSEGLLMSLASIVTELRATNGSKDKHAVRYFLDPVLGDDDCG---FYVPQELVATYRDAMLPLATVITPNTFEAQQL 211
            PERE RVLS+QSH V GYVGNKAAT PLQ+LGLEVD +N+V FS H GY H +G    + +   L EGLK+N V +YDYVL+GY R    L  +  IV EL+  N +     + Y  DPV+GD   G    YVP++L+  YRD ++P+A +ITPN FEA+ L
Sbjct:    5 PERECRVLSIQSHVVRGYVGNKAATFPLQVLGLEVDTVNSVQFSNHTGYAHWKGQVLNSDELHELYEGLKLNNVNHYDYVLTGYTRDTSFLGMVVDIVKELKQQNSN-----LVYVCDPVMGDKWNGEGSMYVPKDLLPVYRDKVVPVADIITPNQFEAELL 161          
BLAST of jgi.p|Trimin1|349205 vs. uniprot
Match: A0A7K4LR80_9AVES (Pyridoxal kinase (Fragment) n=15 Tax=Aves TaxID=8782 RepID=A0A7K4LR80_9AVES)

HSP 1 Score: 163 bits (413), Expect = 7.410e-46
Identity = 86/170 (50.59%), Postives = 108/170 (63.53%), Query Frame = 0
Query:   45 AKAFQATLPEREGRVLSVQSHTVHGYVGNKAATLPLQLLGLEVDPLNTVHFSTHAGYKHLRGDATTAQQFDTLVEGLKINGVFNYDYVLSGYARSEGLLMSLASIVTELRATNGSKDKHAVRYFLDPVLGDDDCG---FYVPQELVATYRDAMLPLATVITPNTFEAQQL 211
            A A  A  PERE RVLS+QSH V GYVGNKAAT PLQ+LG EVD +N+V FS H GY H +G    + +   L EGLK+N V  YDYVL+GY R    L  +  IV EL+  N +     + Y  DPV+GD   G    YVP++L+  YRD ++P+A +ITPN FEA+ L
Sbjct:    3 AAAAAAMEPERECRVLSIQSHVVRGYVGNKAATFPLQVLGFEVDTVNSVQFSNHTGYAHWKGQVLNSGELHELYEGLKLNNVNQYDYVLTGYTRDTSFLAMVVDIVQELKKQNSN-----LVYVCDPVMGDKWNGEGSMYVPKDLLPVYRDKVVPVADIITPNQFEAELL 167          
BLAST of jgi.p|Trimin1|349205 vs. uniprot
Match: A0A3Q2TUH0_CHICK (Pyridoxal kinase n=27 Tax=Neognathae TaxID=8825 RepID=A0A3Q2TUH0_CHICK)

HSP 1 Score: 162 bits (411), Expect = 1.200e-45
Identity = 82/161 (50.93%), Postives = 106/161 (65.84%), Query Frame = 0
Query:   53 PEREGRVLSVQSHTVHGYVGNKAATLPLQLLGLEVDPLNTVHFSTHAGYKHLRGDATTAQQFDTLVEGLKINGVFNYDYVLSGYARSEGLLMSLASIVTELRATNGSKDKHAVRYFLDPVLGD--DDCGFYVPQELVATYRDAMLPLATVITPNTFEAQQL 211
            PERE RVLS+QSH V GYVGNKAAT PLQ+LG EVD +N+V FS H GY H +G    + +   L EGLK+N V  YDYVL+GY R    L  +  IV EL+  N +     + Y  DPV+GD  ++   YVP++L+  YRD ++P+A +ITPN FEA+ L
Sbjct:    3 PERECRVLSIQSHVVRGYVGNKAATFPLQVLGFEVDTVNSVQFSNHTGYAHWKGQVLNSDELHELYEGLKLNKVNQYDYVLTGYTRDTSFLAMVVDIVQELKQQNSN-----LVYVCDPVMGDKWNEGSMYVPKDLLPVYRDKVVPVADIITPNQFEAELL 158          
BLAST of jgi.p|Trimin1|349205 vs. uniprot
Match: A0A3Q2ZL42_HIPCM (Pyridoxal kinase n=2 Tax=Syngnathidae TaxID=72045 RepID=A0A3Q2ZL42_HIPCM)

HSP 1 Score: 162 bits (410), Expect = 1.650e-45
Identity = 80/156 (51.28%), Postives = 106/156 (67.95%), Query Frame = 0
Query:   56 EGRVLSVQSHTVHGYVGNKAATLPLQLLGLEVDPLNTVHFSTHAGYKHLRGDATTAQQFDTLVEGLKINGVFNYDYVLSGYARSEGLLMSLASIVTELRATNGSKDKHAVRYFLDPVLGDDDCGFYVPQELVATYRDAMLPLATVITPNTFEAQQL 211
            E RVLS+QSH V GYVGNK+AT PLQ+LG EVD +N+V FS H GY H +G    A + + L EG+K+N V +YDY+L+GY+R    LM++  IV EL+  N S     + Y  DPV+GD     YVP+EL+  YRD ++PLA ++TPN FEA+ L
Sbjct:    5 ECRVLSIQSHVVRGYVGNKSATFPLQVLGFEVDSINSVQFSNHTGYAHWKGQVLKADELNVLYEGIKLNKVNHYDYILTGYSRDTSFLMTVVEIVKELKKANPS-----LVYVCDPVMGDHGA-MYVPEELLPVYRDKVVPLADILTPNQFEAELL 154          
BLAST of jgi.p|Trimin1|349205 vs. uniprot
Match: Q5U3M7_DANRE (Pyridoxal kinase n=6 Tax=Danio rerio TaxID=7955 RepID=Q5U3M7_DANRE)

HSP 1 Score: 162 bits (409), Expect = 1.950e-45
Identity = 81/154 (52.60%), Postives = 105/154 (68.18%), Query Frame = 0
Query:   58 RVLSVQSHTVHGYVGNKAATLPLQLLGLEVDPLNTVHFSTHAGYKHLRGDATTAQQFDTLVEGLKINGVFNYDYVLSGYARSEGLLMSLASIVTELRATNGSKDKHAVRYFLDPVLGDDDCGFYVPQELVATYRDAMLPLATVITPNTFEAQQL 211
            RVLSVQSH V GYVGNK+AT PLQ+LG EVD +N+V FS H GY+H +G   TA + + L EG+K+N V +YDYVL+GY R +  L ++  IV EL+  N S     + Y  DPVLGD+    YVP+ L+  YRD ++P A +ITPN FEA+ L
Sbjct:    4 RVLSVQSHVVRGYVGNKSATFPLQVLGFEVDTINSVQFSNHTGYEHWKGQVLTADELNVLYEGIKLNNVNHYDYVLTGYTRDDSFLDTVVDIVQELKRANPS-----LVYVCDPVLGDNGA-MYVPENLLPIYRDRVVPAADIITPNQFEAELL 151          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349205 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CDA8_9STRA5.760e-149100.00Pyridoxal kinase n=1 Tax=Tribonema minus TaxID=303... [more]
A0A1D5PVA2_CHICK5.280e-4751.23Pyridoxal kinase n=3 Tax=Aves TaxID=8782 RepID=A0A... [more]
A0A7S0E9S0_9EUKA1.600e-4653.85Pyridoxal kinase (Fragment) n=1 Tax=Phaeocystis an... [more]
UPI001261923F4.200e-4650.94pyridoxal kinase n=1 Tax=Mastomys coucha TaxID=356... [more]
A0A7J5Y2F2_DISMA5.430e-4650.64Pyridoxal kinase n=2 Tax=Perciformes TaxID=8111 Re... [more]
UPI000907003B6.530e-4651.85pyridoxal kinase n=1 Tax=Alligator mississippiensi... [more]
A0A7K4LR80_9AVES7.410e-4650.59Pyridoxal kinase (Fragment) n=15 Tax=Aves TaxID=87... [more]
A0A3Q2TUH0_CHICK1.200e-4550.93Pyridoxal kinase n=27 Tax=Neognathae TaxID=8825 Re... [more]
A0A3Q2ZL42_HIPCM1.650e-4551.28Pyridoxal kinase n=2 Tax=Syngnathidae TaxID=72045 ... [more]
Q5U3M7_DANRE1.950e-4552.60Pyridoxal kinase n=6 Tax=Danio rerio TaxID=7955 Re... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013749Pyridoxamine kinase/Phosphomethylpyrimidine kinasePFAMPF08543Phos_pyr_kincoord: 161..212
e-value: 1.2E-6
score: 28.1
IPR004625Pyridoxine kinaseTIGRFAMTIGR00687TIGR00687coord: 58..211
e-value: 1.7E-46
score: 156.8
IPR004625Pyridoxine kinasePANTHERPTHR10534PYRIDOXAL KINASEcoord: 50..212
IPR004625Pyridoxine kinaseCDDcd01173pyridoxal_pyridoxamine_kinasecoord: 58..211
e-value: 1.50462E-64
score: 198.577
IPR029056Ribokinase-likeGENE3D3.40.1190.20coord: 54..214
e-value: 7.3E-53
score: 181.7
IPR029056Ribokinase-likeSUPERFAMILY53613Ribokinase-likecoord: 57..211

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_39contigContig_39:112301..115650 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349205mRNA_9170Tribonema minus UTEX_B_3156 mRNAContig_39 112264..115650 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|349205|estExt_Genemark1.C_Ctg_390010 ID=Trimin1|349205|estExt_Genemark1.C_Ctg_390010|Name=jgi.p|Trimin1|349205|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=216bp
MLSCLSRRVAPIASLAARSSMHTSNTMRNASPLVMHSSPLRSEHAKAFQA
TLPEREGRVLSVQSHTVHGYVGNKAATLPLQLLGLEVDPLNTVHFSTHAG
YKHLRGDATTAQQFDTLVEGLKINGVFNYDYVLSGYARSEGLLMSLASIV
TELRATNGSKDKHAVRYFLDPVLGDDDCGFYVPQELVATYRDAMLPLATV
ITPNTFEAQQLRRSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013749PM/HMP-P_kinase-1
IPR004625PyrdxlKinase
IPR029056Ribokinase-like