Trimin1|165655|e_gw1.39.113.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|165655
Unique NameTrimin1|165655|e_gw1.39.113.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length460
Homology
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BLAST of jgi.p|Trimin1|165655 vs. uniprot
Match: A0A835YTT8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTT8_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 1.290e-12
Identity = 39/39 (100.00%), Postives = 39/39 (100.00%), Query Frame = 0 
Query:  421 GANVTVGSRRLSVCVLGCQGGLKGAIQALGRTRQWAVMM 459
            GANVTVGSRRLSVCVLGCQGGLKGAIQALGRTRQWAVMM
Sbjct:  421 GANVTVGSRRLSVCVLGCQGGLKGAIQALGRTRQWAVMM 459
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|165655 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YTT8_9STRA1.290e-12100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 205..341
e-value: 4.2E-31
score: 109.6
coord: 1..204
e-value: 1.7E-44
score: 153.6
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 342..437
e-value: 8.4E-12
score: 46.9
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 266..360
coord: 191..338
coord: 314..422
coord: 8..69
coord: 51..203
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 2..263
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 193..420

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_39contigContig_39:386203..387582 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|165655mRNA_9208Tribonema minus UTEX_B_3156 mRNAContig_39 386203..387582 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|165655|e_gw1.39.113.1 ID=Trimin1|165655|e_gw1.39.113.1|Name=jgi.p|Trimin1|165655|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=460bp
LTGLLELLGELTALRELQLSGCKRVARLPDSLGQLASLTLLDMTACFVLA
RLPESLGGLTALTTLNLHMCTALACLPESAGGMAALTRLDMTGCEAVTRL
PDSVGQLAALRELCLDDCTRLEALPESLGQLTALTSFRLCRCRALTRLPE
WLADLTGLTTLLVDGCVGLTHLPQWFGEHASQDTLDFTGYKRLTCLPEFI
GLMSATLTTLNLSECSSLAALPDFLGQLAALKSLKLCYCHSLQSLPDSLG
QLTALSFIHLHRCEALTALPDSVGQLTKLTSLNLMLCTALTSLPESFGRL
AALTSLNLEECTALASLPKSFGQLALLPSLDLTGCASLVALPASLGQLTR
LQQLCLRRCASLAALPDTLGQLTALQSLDLSECTALSALPDTLGQLAAPT
RLNLKDCRAITALPATIGSLGANVTVGSRRLSVCVLGCQGGLKGAIQALG
RTRQWAVMM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf