Trimin1|165637|e_gw1.39.27.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|165637
Unique NameTrimin1|165637|e_gw1.39.27.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length567
Homology
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BLAST of jgi.p|Trimin1|165637 vs. uniprot
Match: A0A835Z1Z2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Z2_9STRA)

HSP 1 Score: 105 bits (263), Expect = 2.110e-20
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 
Query:    1 MVLQSLPCLDDYVGGQAVAQTPALTALNLRYCNSLASLPESKIDQLRGXXXXXXXXXXXXXXXXXSLGQLTXXXXXXXXXXXXXXXXXXXXXXXXXLLKLDLS 103
            MVLQSLPCLDDYVGGQAVAQTPALTALNLRYCNSLASLPESKIDQLRGXXXXXXXXXXXXXXXXXSLGQLTXXXXXXXXXXXXXXXXXXXXXXXXXLLKLDLS
Sbjct:    1 MVLQSLPCLDDYVGGQAVAQTPALTALNLRYCNSLASLPESKIDQLRGXXXXXXXXXXXXXXXXXSLGQLTXXXXXXXXXXXXXXXXXXXXXXXXXLLKLDLS 103
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|165637 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835Z1Z2_9STRA2.110e-20100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 481..505
e-value: 32.0
score: 9.1
coord: 94..118
e-value: 91.0
score: 5.4
coord: 310..334
e-value: 140.0
score: 3.8
coord: 142..166
e-value: 52.0
score: 7.4
coord: 214..238
e-value: 150.0
score: 3.7
coord: 46..70
e-value: 96.0
score: 5.2
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 13..184
e-value: 7.2E-31
score: 109.1
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 352..536
e-value: 1.3E-40
score: 140.9
coord: 185..351
e-value: 6.5E-36
score: 125.4
NoneNo IPR availablePANTHERPTHR16083:SF24BNAANNG23130D PROTEINcoord: 18..178
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 404..529
coord: 318..487
NoneNo IPR availablePANTHERPTHR16083:SF24BNAANNG23130D PROTEINcoord: 183..318
coord: 253..348
coord: 318..487
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 183..318
coord: 18..178
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 124..251
NoneNo IPR availablePANTHERPTHR16083:SF24BNAANNG23130D PROTEINcoord: 404..529
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 253..348
NoneNo IPR availablePANTHERPTHR16083:SF24BNAANNG23130D PROTEINcoord: 124..251
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 19..347
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 354..522

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_39contigContig_39:592189..594091 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|165637mRNA_9228Tribonema minus UTEX_B_3156 mRNAContig_39 592189..594091 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|165637|e_gw1.39.27.1 ID=Trimin1|165637|e_gw1.39.27.1|Name=jgi.p|Trimin1|165637|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=567bp
MVLQSLPCLDDYVGGQAVAQTPALTALNLRYCNSLASLPESKIDQLRGLT
SLQLNQCRDLTSLPESLGQLTALTALQIPACARIAQLPDSLGQLTALLKL
DLSDCSSLTALPELACRLTALVTLNMHGCRALTHLPEALGHLAALTELDL
NDCARLRSLPAWLGQLMALRALQLAHCAALPALPASSWQLSHVTALRLVG
CQALTGLPELLGELTALRELLLSGCARVARLPDSLGQLASLTLLDATACR
ALTRLPEALGGLTALTTLSLRTCTALACLPESAGGMAALTRLDMTWCKAV
TRLPDSAGQLAALRELCLDDCTRLEALPESLGQLMSLASVRLCRCRALAC
CFSLAALPDSLGRLRTLHALKLRLCRSLRSLPESLGRLIALRSINLHSCE
ALTALPDSFGQLMRLTALNLKQCTALTSLPESFGQLAALPSLDLTGCASL
VALPASFGQLTGLQELSLHRCASLAALPDSLPALQSLNLSECTALRALPD
TLGQLAVLTELNLKECRALTALPAAMGSLGTTARTLGLRIFVQGCQGGLK
GAIQELGRMRAWNVIM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675LRR_dom_sf