Trimin1|141883|gw1.39.90.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|141883
Unique NameTrimin1|141883|gw1.39.90.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length207
Homology
BLAST of jgi.p|Trimin1|141883 vs. uniprot
Match: A0A835YVP6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVP6_9STRA)

HSP 1 Score: 397 bits (1021), Expect = 8.520e-140
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0
Query:    1 GYYHQTWDAARTAPAGTTLGVAFGGWADVTLALSDATNTFSKLGGAKYLDVGGGNGSGAWTAALITKLDANLAVVKNAGYVGICYDIEEGVTGLAPAFAASFANAKAAGLKVLVTISHSAPYGFPDAAAVMSAVFASASVDYLSPQLYTTGAETANDWATSGGVAWTSYAGIAARVVPSVARAGLYASAQATFATYGVTTWGYVAWS 207
            GYYHQTWDAARTAPAGTTLGVAFGGWADVTLALSDATNTFSKLGGAKYLDVGGGNGSGAWTAALITKLDANLAVVKNAGYVGICYDIEEGVTGLAPAFAASFANAKAAGLKVLVTISHSAPYGFPDAAAVMSAVFASASVDYLSPQLYTTGAETANDWATSGGVAWTSYAGIAARVVPSVARAGLYASAQATFATYGVTTWGYVAWS
Sbjct:    1 GYYHQTWDAARTAPAGTTLGVAFGGWADVTLALSDATNTFSKLGGAKYLDVGGGNGSGAWTAALITKLDANLAVVKNAGYVGICYDIEEGVTGLAPAFAASFANAKAAGLKVLVTISHSAPYGFPDAAAVMSAVFASASVDYLSPQLYTTGAETANDWATSGGVAWTSYAGIAARVVPSVARAGLYASAQATFATYGVTTWGYVAWS 207          
BLAST of jgi.p|Trimin1|141883 vs. uniprot
Match: A0A836CN73_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN73_9STRA)

HSP 1 Score: 259 bits (661), Expect = 2.260e-84
Identity = 133/208 (63.94%), Postives = 162/208 (77.88%), Query Frame = 0
Query:    1 GYYHQTWDAARTAPAGTTLGVAFGGWADVTLALSDATNTFSKLGGAKYLDVGGGNGSGAWTAALITKLDANLAVVKNAGYVGICYDIEEGVTGLAPAFAASFANAKAAGLKVLVTISHSAPYGFPDAAAVMSAVFASASVDYLSPQLYTTGAETANDWATSGG-VAWTSYAGIAARVVPSVARAGLYASAQATFATYGVTTWGYVAWS 207
            GYY QTW   R AP+GT LGVAFGGWADV  AL+DA   ++ L G+KYLD+GGG+ +G WT+  ITKL+  L  +K+AGYVG+CYDIEEG  GL+ AFA SFA AKAAGLKVLVTISHS PYGF DAA +M+ +FASASVDY+SPQLYT+G ETANDW   GG + W SYA    ++VPSV +A +YA+AQ+TF +YGVTT GY+ W+
Sbjct:   42 GYYDQTWQQ-RAAPSGTNLGVAFGGWADVDQALADAQQVYNNLVGSKYLDIGGGDSNGRWTSNSITKLNNGLGKIKSAGYVGVCYDIEEGDAGLSTAFANSFAKAKAAGLKVLVTISHSQPYGFSDAATIMNTMFASASVDYVSPQLYTSGGETANDWTVDGGAIGWRSYASSKGKIVPSVVKASMYANAQSTFQSYGVTTAGYITWA 248          
BLAST of jgi.p|Trimin1|141883 vs. uniprot
Match: A0A6J4FDS3_9PROT (LysM domain-containing protein n=2 Tax=Magnetospirillum sp. LM-5 TaxID=2681466 RepID=A0A6J4FDS3_9PROT)

HSP 1 Score: 204 bits (520), Expect = 2.440e-62
Identity = 110/207 (53.14%), Postives = 142/207 (68.60%), Query Frame = 0
Query:    1 GYYHQTWDAARTAPAGTTLGVAFGGWADVTLALSDATNTFSKLGGAKYLDVGGGNGSGAWTAALITKLDANLAVVKNAGYVGICYDIEEGVTGLAPAFAASFANAKAAGLKVLVTISHSAPYGFPDAAAVMSAVFASASVDYLSPQLYTTGAETANDWATSGGVAWTSYAGIAARVVPSVARAGLYASAQATFATYGVTTWGYVAWS 207
            GY+ +TW  + T PAG  LG+AF GW D   ALS++  T + L G KYL +GGGN +G ++A L+ K+++ +A    A Y G+ YD+EEG +GL+  FA SFA AKAAGLKVLVT+SHS PYG  DAA +M   F   ++D+LSPQLYT+G+ETANDWAT+ GV W SY    A V+PS+  A LYA A+   A  GVTT GYV W+
Sbjct:   92 GYWRRTW-LSVTPPAGANLGIAFSGWTDPDQALSNSAATVAGLVGTKYLGLGGGNENGRFSADLLQKINSAIAAGSFAAYQGLAYDVEEGDSGLSVPFAQSFAAAKAAGLKVLVTVSHSGPYGIADAAQLMEGFFQDGNIDFLSPQLYTSGSETANDWATTAGVTWQSYGTAKAAVIPSIVTASLYADAKTVLAQAGVTTQGYVVWN 297          
BLAST of jgi.p|Trimin1|141883 vs. uniprot
Match: UPI00146A2EFB (LysM peptidoglycan-binding domain-containing protein n=2 Tax=Shewanella TaxID=22 RepID=UPI00146A2EFB)

HSP 1 Score: 191 bits (486), Expect = 8.850e-57
Identity = 105/207 (50.72%), Postives = 142/207 (68.60%), Query Frame = 0
Query:    1 GYYHQTWDAARTAPAGTTLGVAFGGWADVTLALSDATNTFSKLGGAKYLDVGGGNGSGAWTAALITKLDANLAVVKNAGYVGICYDIEEGVTGLAPAFAASFANAKAAGLKVLVTISHSAPYGFPDAAAVMSAVFASASVDYLSPQLYTTGAETANDWATSGGVAWTSYAGIAARVVPSVARAGLYASAQATFATYGVTTWGYVAWS 207
            GY+  T+  +   PA  T+ +AF GWADV  AL D+    + L G K+L VGGGN SGA+T+A +T L A +   +  GY GI YD+EEG +GL   F ASFA AK+ G KVLVT+SHSAPYG  D+AA+M + FA A++D+LSPQLYT+G ET ND++TS GV+W+ YA   A++VPS+  A +Y +A+  FA  GV+  G+V W+
Sbjct:  127 GYWAWTYSQSAV-PANATMSMAFSGWADVQTALQDSAPKLAHLVGTKFLCVGGGNQSGAFTSANLTALTAAIQAGECVGYDGIAYDVEEGYSGLESLFTASFATAKSKGFKVLVTVSHSAPYGITDSAALMKSFFADANIDFLSPQLYTSGKETGNDYSTSHGVSWSDYAACKAKIVPSLVNASMYDAAKDYFAGQGVSIRGFVQWA 332          
BLAST of jgi.p|Trimin1|141883 vs. uniprot
Match: A0A2N1FAR5_9FLAO (Uncharacterized protein n=2 Tax=Tenacibaculum TaxID=104267 RepID=A0A2N1FAR5_9FLAO)

HSP 1 Score: 186 bits (473), Expect = 2.770e-56
Identity = 99/207 (47.83%), Postives = 137/207 (66.18%), Query Frame = 0
Query:    1 GYYHQTWDAARTAPAGTTLGVAFGGWADVTLALSDATNTFSKLGGAKYLDVGGGNGSGAWTAALITKLDANLAVVKNAGYVGICYDIEEGVTGLAPAFAASFANAKAAGLKVLVTISHSAPYGFPDAAAVMSAVFASASVDYLSPQLYTTGAETANDWATSGGVAWTSYAGIAARVVPSVARAGLYASAQATFATYGVTTWGYVAWS 207
            GY++ TW+ +  +P GTTL +AF G++D   A++++ +   KL G KY+ +GGGN +GA+T  ++  L  ++      GY GI YD+EEG T L   FAASF  AK  GLKVLVT+SHSAPYG  DA  +M + F++ ++D +SPQLYTTG E+AND+ TS GV W  Y    A +VPS+ +A +Y SAQ  FA  G+T  GY+ WS
Sbjct:    9 GYWNWTWETSNPSPDGTTLSIAFSGYSDAQEAINNSISKKDKLSGEKYISIGGGNAAGAFTQNILESLTLSIQNGDFEGYDGIAYDVEEGDTNLENYFAASFQAAKNKGLKVLVTVSHSAPYGISDARELMYSFFSNENIDIISPQLYTTGQESANDYDTSQGVLWNDYENCKAAIVPSIVKASMYESAQEYFARLGLTLQGYIQWS 215          
BLAST of jgi.p|Trimin1|141883 vs. uniprot
Match: UPI00164AF8C8 (LysM domain-containing protein n=1 Tax=Undibacterium umbellatum TaxID=2762300 RepID=UPI00164AF8C8)

HSP 1 Score: 190 bits (482), Expect = 4.370e-56
Identity = 105/206 (50.97%), Postives = 132/206 (64.08%), Query Frame = 0
Query:    1 GYYHQTWDAARTAPAGTTLGVAFGGWADVTLALSDATNTFSKLGGAKYLDVGGGNGSGAWTAALITKLDANLAVVKNAGYVGICYDIEEGVTGLAPAFAASFANAKAAGLKVLVTISHSAPYGFPDAAAVMSAVFASASVDYLSPQLYTTGAETANDWATSGGVAWTSYAGIAARVVPSVARAGLYASAQATFATYGVTTWGYVAW 206
            G ++ TW      P  T LG+AF GW     A+ ++    S+L G KY+ +GGGN SGAWT + +  +   +     + Y GI YDIEEG +GLA AF ASF  AKA GLKVLVT+SHSAPYG  DAAA+M + FAS  +D LSPQLYTTG ET+N +ATSGGV+W+ YA   A V PS+  A LYA AQ  F   GV+  G++ W
Sbjct:  135 GLWYWTWSKNTQVPDNTNLGIAFSGWVSPQTAIDNSNAVHSQLPGLKYICLGGGNESGAWTESAVLSVTNAINSGSLSAYQGIAYDIEEGSSGLAAAFEASFTAAKAKGLKVLVTVSHSAPYGIEDAAALMRSFFASPVIDILSPQLYTTGEETSNQYATSGGVSWSEYADAKAIVAPSIVNASLYADAQEYFLAQGVSLGGFLQW 340          
BLAST of jgi.p|Trimin1|141883 vs. uniprot
Match: A0A1S2E6D0_AGRVI (LysM peptidoglycan-binding domain-containing protein n=2 Tax=Agrobacterium vitis TaxID=373 RepID=A0A1S2E6D0_AGRVI)

HSP 1 Score: 188 bits (478), Expect = 1.990e-55
Identity = 103/207 (49.76%), Postives = 139/207 (67.15%), Query Frame = 0
Query:    1 GYYHQTWDAARTAPAGTTLGVAFGGWADVTLALSDATNTFSKLGGAKYLDVGGGNGSGAWTAALITKLDANLAVVKNAGYVGICYDIEEGVTGLAPAFAASFANAKAAGLKVLVTISHSAPYGFPDAAAVMSAVFASASVDYLSPQLYTTGAETANDWATSGGVAWTSYAGIAARVVPSVARAGLYASAQATFATYGVTTWGYVAWS 207
            GY+H+TW  A   P+ TT+ +AF G+++ T AL+ +      L G KY+ +GGGN SG ++A+ +  +DA +     + Y GI YDIEEG  GL+ AF  SFANA+AAG KVLVT+SHSAP+G  DA ++M A F  A++D LSPQLYTTG E +NDW TS GV W+ YA   A+VVPS+  A LY + Q+TF  + VT  GY+ W+
Sbjct:  128 GYWHKTWHRAA-GPSNTTMDLAFSGYSNPTKALAQSAPILPSLVGEKYITLGGGNASGRFSASTLQSIDACIKSGAFSAYKGIAYDIEEGNRGLSGAFHQSFANARAAGFKVLVTVSHSAPFGIADAKSLMFAFFDDANIDILSPQLYTTGEEPSNDWTTSHGVTWSDYATAKAQVVPSIVHANLYPNVQSTFKIHDVTPNGYILWA 333          
BLAST of jgi.p|Trimin1|141883 vs. uniprot
Match: Q2W0C5_MAGSA (Uncharacterized protein n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) TaxID=342108 RepID=Q2W0C5_MAGSA)

HSP 1 Score: 186 bits (472), Expect = 1.180e-54
Identity = 106/209 (50.72%), Postives = 136/209 (65.07%), Query Frame = 0
Query:    1 GYYHQTWDAARTAPAGTTLGVAFGGWADVTLALSDATNTFSKLGGAKYLDVGGGNGSGAWTAALITKLDANLAVVKNAGYVGICYDIEEGVTGLAPAFAASFANAKAAGLKVLVTISHSAPYGFPDAAAVMSAVFASASVDYLSPQLYTTGAETANDWATSGG--VAWTSYAGIAARVVPSVARAGLYASAQATFATYGVTTWGYVAWS 207
            GY+ +TW A    P+G TLG+AF GWAD   AL+D+    S L G KY+ +GGGN +G +TA  + K++A +   + A Y GI YDIE G +GLA AF  +FA AKA G  VLVT+SH+APYG  DA  +M+A F  A++D+LSPQLYT G ETAND+  + G  V W  YA   A V+PS+  A LY  AQ   A +GVTT GYV W+
Sbjct:  128 GYWRRTWGAC-VPPSGATLGLAFSGWADPASALADSAAALSGLEGVKYITLGGGNDNGRFTAQDLDKINAAITGGQFAAYGGIAYDIENGDSGLASAFQGAFALAKANGFLVLVTVSHTAPYGIGDADTLMAAFFQDANIDFLSPQLYTNGDETANDYQITSGTTVTWAQYAKARAAVIPSIVTASLYPDAQQVLANHGVTTQGYVVWN 335          
BLAST of jgi.p|Trimin1|141883 vs. uniprot
Match: A0A1U9JM14_9NEIS (Uncharacterized protein n=1 Tax=Aquaspirillum sp. LM1 TaxID=1938604 RepID=A0A1U9JM14_9NEIS)

HSP 1 Score: 186 bits (472), Expect = 1.210e-54
Identity = 105/207 (50.72%), Postives = 139/207 (67.15%), Query Frame = 0
Query:    1 GYYHQTWDAARTAPAGTTLGVAFGGWADVTLALSDATNTFSKLGGAKYLDVGGGNGSGAWTAALITKLDANLAVVKNAGYVGICYDIEEGVTGLAPAFAASFANAKAAGLKVLVTISHSAPYGFPDAAAVMSAVFASASVDYLSPQLYTTGAETANDWATSGGVAWTSYAGIAARVVPSVARAGLYASAQATFATYGVTTWGYVAWS 207
            GY+  +WDA  +APAG  LG+AF GW     ALS++    ++L G K++ +GGGN SGAW+   +  +   +   + AGY GI YDIEEG  GL   FAASFA AKA G+ VLVT+SHS PYG  DA ++M++ FA+  +D LSPQLYTTG ET+ND+ T+  V W++YA   A +VPS+ RA LY SAQ+ FA  GVT  G+V W+
Sbjct:  131 GYWCWSWDAG-SAPAGANLGIAFSGWVSPDEALSNSLAVVNQLQGKKFICLGGGNSSGAWSNDAVNAVTQAIEANRFAGYHGIAYDIEEGSAGLEAQFAASFAAAKAKGMTVLVTVSHSCPYGITDAVSLMNSFFANRDIDLLSPQLYTTGQETSNDY-TALNVPWSAYAQAQAAIVPSIVRANLYPSAQSYFADQGVTLGGFVQWA 335          
BLAST of jgi.p|Trimin1|141883 vs. uniprot
Match: A0A1Q8ZZ87_9HYPH (LysM domain-containing protein n=2 Tax=Rhizobium taibaishanense TaxID=887144 RepID=A0A1Q8ZZ87_9HYPH)

HSP 1 Score: 183 bits (464), Expect = 2.180e-53
Identity = 96/206 (46.60%), Postives = 140/206 (67.96%), Query Frame = 0
Query:    1 GYYHQTWDAARTAPAGTTLGVAFGGWADVTLALSDATNTFSKLGGAKYLDVGGGNGSGAWTAALITKLDANLAVVKNAGYVGICYDIEEGVTGLAPAFAASFANAKAAGLKVLVTISHSAPYGFPDAAAVMSAVFASASVDYLSPQLYTTGAETANDWATSGGVAWTSYAGIAARVVPSVARAGLYASAQATFATYGVTTWGYVAW 206
            GY+ +TW     APA  T+G+AF G++D + AL+ +    + L G KY+ +GGGN  G+++  ++  +++ +     +   GI YD+EEG +GL+ AF  SF+ AKAA L VLVT+SHS P+G  DA  +M++ F+ A++D+LSPQLYT+G+ET+NDWATSGGV W +Y    A +VPS+  A LY +AQATFA + V T GY+ W
Sbjct:  136 GYWDKTWHRVA-APANATMGLAFSGYSDPSKALAQSATVIANLAGVKYITLGGGNQDGSFSVPILDSINSAIRHGAFSHCQGIAYDVEEGSSGLSAAFRNSFSIAKAASLSVLVTVSHSTPFGVADAKTLMASFFSDANIDFLSPQLYTSGSETSNDWATSGGVTWDAYKDAKAAIVPSITHANLYDNAQATFAHHQVKTAGYIVW 340          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|141883 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YVP6_9STRA8.520e-140100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A836CN73_9STRA2.260e-8463.94Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6J4FDS3_9PROT2.440e-6253.14LysM domain-containing protein n=2 Tax=Magnetospir... [more]
UPI00146A2EFB8.850e-5750.72LysM peptidoglycan-binding domain-containing prote... [more]
A0A2N1FAR5_9FLAO2.770e-5647.83Uncharacterized protein n=2 Tax=Tenacibaculum TaxI... [more]
UPI00164AF8C84.370e-5650.97LysM domain-containing protein n=1 Tax=Undibacteri... [more]
A0A1S2E6D0_AGRVI1.990e-5549.76LysM peptidoglycan-binding domain-containing prote... [more]
Q2W0C5_MAGSA1.180e-5450.72Uncharacterized protein n=1 Tax=Magnetospirillum m... [more]
A0A1U9JM14_9NEIS1.210e-5450.72Uncharacterized protein n=1 Tax=Aquaspirillum sp. ... [more]
A0A1Q8ZZ87_9HYPH2.180e-5346.60LysM domain-containing protein n=2 Tax=Rhizobium t... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.20.20.80Glycosidasescoord: 10..205
e-value: 7.5E-7
score: 30.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_39contigContig_39:979921..981400 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|141883mRNA_9252Tribonema minus UTEX_B_3156 mRNAContig_39 979921..981400 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|141883|gw1.39.90.1 ID=Trimin1|141883|gw1.39.90.1|Name=jgi.p|Trimin1|141883|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=207bp
GYYHQTWDAARTAPAGTTLGVAFGGWADVTLALSDATNTFSKLGGAKYLD
VGGGNGSGAWTAALITKLDANLAVVKNAGYVGICYDIEEGVTGLAPAFAA
SFANAKAAGLKVLVTISHSAPYGFPDAAAVMSAVFASASVDYLSPQLYTT
GAETANDWATSGGVAWTSYAGIAARVVPSVARAGLYASAQATFATYGVTT
WGYVAWS
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