Trimin1|354680|estExt_Genemark1.C_Ctg_3800003 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|354680
Unique NameTrimin1|354680|estExt_Genemark1.C_Ctg_3800003
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length412
Homology
BLAST of jgi.p|Trimin1|354680 vs. uniprot
Match: A0A835YUC7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUC7_9STRA)

HSP 1 Score: 608 bits (1568), Expect = 2.340e-216
Identity = 411/411 (100.00%), Postives = 411/411 (100.00%), Query Frame = 0
Query:    1 MSEPDGTQGPSLVPQDRALVAQLAELLRKHEQXXXXXXXXXXXXXXXXXXXXXXXXHLMRRALQEIRQQXQKIQKLEDAHGVTVRHMQRQNERLRELEELNKQQRATEAQQXXQRQATDGVRTAHDVDTRAQQGAVILRGGIRGYRQSSPLPSMAKCKPVRKALTARAADGNDDCSGDDDSIASLDDATYSAGSDASDSTWVDSDSGERPGSTCDDSSAATASRAPLSRPHSAGGAAATGKANGKGEVRPAQAKQGRKCPHGRHRYICKDCGGKGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGYTGQCRHTHLLTGDGSSALPSSVRVLQFARAMLWHTTAQPEVRAGRNTFRVCHRTLRLAGKGEQKMQNCGRDDEGSRRNTS 411
            MSEPDGTQGPSLVPQDRALVAQLAELLRKHEQXXXXXXXXXXXXXXXXXXXXXXXXHLMRRALQEIRQQXQKIQKLEDAHGVTVRHMQRQNERLRELEELNKQQRATEAQQXXQRQATDGVRTAHDVDTRAQQGAVILRGGIRGYRQSSPLPSMAKCKPVRKALTARAADGNDDCSGDDDSIASLDDATYSAGSDASDSTWVDSDSGERPGSTCDDSSAATASRAPLSRPHSAGGAAATGKANGKGEVRPAQAKQGRKCPHGRHRYICKDCGGKGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGYTGQCRHTHLLTGDGSSALPSSVRVLQFARAMLWHTTAQPEVRAGRNTFRVCHRTLRLAGKGEQKMQNCGRDDEGSRRNTS
Sbjct:    1 MSEPDGTQGPSLVPQDRALVAQLAELLRKHEQXXXXXXXXXXXXXXXXXXXXXXXXHLMRRALQEIRQQXQKIQKLEDAHGVTVRHMQRQNERLRELEELNKQQRATEAQQXXQRQATDGVRTAHDVDTRAQQGAVILRGGIRGYRQSSPLPSMAKCKPVRKALTARAADGNDDCSGDDDSIASLDDATYSAGSDASDSTWVDSDSGERPGSTCDDSSAATASRAPLSRPHSAGGAAATGKANGKGEVRPAQAKQGRKCPHGRHRYICKDCGGKGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGYTGQCRHTHLLTGDGSSALPSSVRVLQFARAMLWHTTAQPEVRAGRNTFRVCHRTLRLAGKGEQKMQNCGRDDEGSRRNTS 411          
BLAST of jgi.p|Trimin1|354680 vs. uniprot
Match: A0A835YU07_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU07_9STRA)

HSP 1 Score: 219 bits (557), Expect = 1.600e-65
Identity = 125/147 (85.03%), Postives = 129/147 (87.76%), Query Frame = 0
Query:   73 IQKLEDAHGVTVRHMQRQNERLRELEELNKQQRATEAQQXXQRQATDGVRTAHDVDTRAQQGAVILRGGIRGYRQSSPLPSMAKCKPVRKALTARAADGNDDCSGDDDSIASLDDATYSAGSDASDSTWVDSDSGERPGSTCDDSSA 219
            IQ LEDAH V VRH+QRQNERLRELEELNKQQRATE   XX RQATDGVRTAHDVDTRAQQGA IL  G+RGYRQSSPL S  K K VRKALTARAA G+DDCSGDD SIASLDDATYSAGSDASDS WVDSDSGE+PGSTCDDSSA
Sbjct:   39 IQNLEDAHVVAVRHLQRQNERLRELEELNKQQRATEXXXXXXRQATDGVRTAHDVDTRAQQGAGILGAGVRGYRQSSPLLSARKHKTVRKALTARAAGGDDDCSGDDYSIASLDDATYSAGSDASDSIWVDSDSGEQPGSTCDDSSA 185          
BLAST of jgi.p|Trimin1|354680 vs. uniprot
Match: A0A835YMQ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMQ1_9STRA)

HSP 1 Score: 125 bits (315), Expect = 1.810e-28
Identity = 95/208 (45.67%), Postives = 111/208 (53.37%), Query Frame = 0
Query:   76 LEDAHGVTVRHMQRQN----ERLRELEELNKQQR---------------------------ATEAQQXXQRQATDGVRTAHDVDTRAQQGAVILRGGIRGYRQSSPLPSMAKCKP------------------------VRKALTARAA-DGNDDCSGDDDSIASLDD------------ATYSAGSDASDSTWVDSDSGERPGSTCD 215
            LED HG+ VR +QRQN    ERLR+L+E+NKQQR                           ATEAQQ  QRQ T+GVRTAH V  RA Q A +L GG++GYRQ SPLPS AK  P                        VR+ALTA  A +G+DDCSGDD +I SLDD            A  S     +DST++DSDSGER GSTCD
Sbjct:    5 LEDEHGIAVRDLQRQNGQQQERLRQLQEVNKQQRVASEXXXXXXXXXXXXXXXXXXXXXXRATEAQQRQQRQVTNGVRTAHGVKFRAPQHAGMLGGGVQGYRQISPLPSPAKRNPQPSTTATXXXXXGGDAHTAAVTGLVREALTAPGAGEGDDDCSGDDHNIHSLDDDAEANSSVSQEEAQISCQESEADSTYIDSDSGERAGSTCD 212          
BLAST of jgi.p|Trimin1|354680 vs. uniprot
Match: A0A835Z7P8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7P8_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 2.340e-7
Identity = 73/200 (36.50%), Postives = 89/200 (44.50%), Query Frame = 0
Query:   89 RQNERLRELEELNKQQRA-----------------------------TEAQQXXQRQATDGVRTAHDVDTRAQQGAVILRGGIRGYRQSSPLP------------------------SMAKCKPVRKALTARAADGNDD-CSGDDDSIASLD-DATY-------------------------SAGSDASDSTWVDSDSGE 208
            RQ +RLRELEE NK+QRA                             +EA+Q    QAT  VRTAH  +   QQGA +L G  R  RQSS +P                        + A  +PV +ALTA  A G+DD CSG+D +I SLD DA +                         SAGSDASDST+V SD+GE
Sbjct:   58 RQQQRLRELEEDNKRQRAASEQXXXXXXXXXXXXXXXXVTIANQRRTSEAKQQQHCQATGVVRTAHGAE---QQGAGMLGGDERVNRQSSLVPPTEEGEPQIPATETAGGSGGGISHTKAVTRPVGEALTAGDAGGSDDDCSGNDHNIHSLDVDANHDSVSQEVAENSCHESETHTDTGDACSAGSDASDSTYVCSDNGE 254          
BLAST of jgi.p|Trimin1|354680 vs. uniprot
Match: A0A835Z6U3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6U3_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 5.170e-6
Identity = 76/214 (35.51%), Postives = 86/214 (40.19%), Query Frame = 0
Query:  137 ILRGGIRGYRQSSPLP------------------------SMAKCKPVRKALTARAADGND-DCSGDDDSIASLD-DATY-------------------------SAGSDASDSTWVDSDSGERPGSTC------DDSS-----------------------------------AATASRAPLSRPHSAGGAAATGKANGKGEVRPAQAKQGRK 258
            +L GG RG RQSS +P                        + A  +PV +ALTA  A G+D DCSGDD SI SLD DA +                         SAGSDASDST+V SDSGER    C      DDSS                                   AA AS A  SR  S G AA TGK  GKG  +  + KQ RK
Sbjct:    1 MLGGGARGNRQSSLVPFSEEREPQAPATTTAGGSGGGICLTKAVTRPVGEALTAGDAGGSDGDCSGDDHSIHSLDVDANHDSVGQEVAENSSHESETNTDAGGACSAGSDASDSTYVCSDSGERFTGMCEERVVADDSSDADSYARGSDSSSNFKPIRKCARIAGVASSNPRRRAAAASDALRSRAFSTGDAAGTGKTKGKGSAKRPRPKQQRK 214          
BLAST of jgi.p|Trimin1|354680 vs. uniprot
Match: A0A835YMQ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMQ4_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 8.920e-6
Identity = 66/199 (33.17%), Postives = 96/199 (48.24%), Query Frame = 0
Query:   64 QEIRQQXQKIQKLEDAHGVTVRHMQRQNERLRELEE-----LNKQQRATEA--QQXXQRQATDGVRTAHDVDTRAQQGAVILRGGIRGYRQSSPLPSMAKCKPVRKALTARAADGNDDCSG--------------DDDSIASLDDATY--------------------SAGSDASDSTWVDSDSGERP--GSTCDDSSA 219
            Q+ R+Q   +QKLE+ +       +++  RLRELEE     +  QQRA  A  +Q  Q Q TDG+RTA+ V+T+ QQGA +L G    ++ S+    M    P   + ++    G +  +G              D+D+   +   +                     S GSDA DST++DSDSGER   GSTCD+SSA
Sbjct:   11 QQNRRQHDWLQKLEEVNKRQRAASEQRQGRLRELEEQLRITIENQQRAMGAGSEQLQQWQLTDGMRTAYGVETKLQQGAGMLGGD--NHQLSTLHAEMQTKSPTTASTSSSHCGGGNAHTGAVTRPRRRLQHPSLDNDTKLEVGSVSLEVAENSCQEREEGTDAGGGNSGGSDACDSTYIDSDSGERAQAGSTCDESSA 207          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354680 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A835YUC7_9STRA2.340e-216100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YU07_9STRA1.600e-6585.03Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835YMQ1_9STRA1.810e-2845.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z7P8_9STRA2.340e-736.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z6U3_9STRA5.170e-635.51Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YMQ4_9STRA8.920e-633.17Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 16..79
NoneNo IPR availableCOILSCoilCoilcoord: 87..117
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 196..225
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 196..256
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..120
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_380contigContig_380:5148..8275 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354680mRNA_18866Tribonema minus UTEX_B_3156 mRNAContig_380 4875..8275 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|354680|estExt_Genemark1.C_Ctg_3800003 ID=Trimin1|354680|estExt_Genemark1.C_Ctg_3800003|Name=jgi.p|Trimin1|354680|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=412bp
MSEPDGTQGPSLVPQDRALVAQLAELLRKHEQQEERQQQEQQRQQQQHQQ
DEQQQRHLMRRALQEIRQQQQKIQKLEDAHGVTVRHMQRQNERLRELEEL
NKQQRATEAQQQQQRQATDGVRTAHDVDTRAQQGAVILRGGIRGYRQSSP
LPSMAKCKPVRKALTARAADGNDDCSGDDDSIASLDDATYSAGSDASDST
WVDSDSGERPGSTCDDSSAATASRAPLSRPHSAGGAAATGKANGKGEVRP
AQAKQGRKCPHGRHRYICKDCGGKGICQHGRERRRCKDCGGAGVCEHGRR
RRDCKDCGGAGICEHRRERRKCKHCGGAAGYTGQCRHTHLLTGDGSSALP
SSVRVLQFARAMLWHTTAQPEVRAGRNTFRVCHRTLRLAGKGEQKMQNCG
RDDEGSRRNTS*
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