mRNA_18866 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|354680
Unique NamemRNA_18866
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|354680 vs. uniprot
Match: A0A835YUC7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUC7_9STRA)

HSP 1 Score: 608 bits (1568), Expect = 7.610e-215
Identity = 411/411 (100.00%), Postives = 411/411 (100.00%), Query Frame = 1 
Query:    1 MSEPDGTQGPSLVPQDRALVAQLAELLRKHEQXXXXXXXXXXXXXXXXXXXXXXXXHLMRRALQEIRQQXQKIQKLEDAHGVTVRHMQRQNERLRELEELNKQQRATEAQQXXQRQATDGVRTAHDVDTRAQQGAVILRGGIRGYRQSSPLPSMAKCKPVRKALTARAADGNDDCSGDDDSIASLDDATYSAGSDASDSTWVDSDSGERPGSTCDDSSAATASRAPLSRPHSAGGAAATGKANGKGEVRPAQAKQGRKCPHGRHRYICKDCGGKGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGYTGQCRHTHLLTGDGSSALPSSVRVLQFARAMLWHTTAQPEVRAGRNTFRVCHRTLRLAGKGEQKMQNCGRDDEGSRRNTS 1233
            MSEPDGTQGPSLVPQDRALVAQLAELLRKHEQXXXXXXXXXXXXXXXXXXXXXXXXHLMRRALQEIRQQXQKIQKLEDAHGVTVRHMQRQNERLRELEELNKQQRATEAQQXXQRQATDGVRTAHDVDTRAQQGAVILRGGIRGYRQSSPLPSMAKCKPVRKALTARAADGNDDCSGDDDSIASLDDATYSAGSDASDSTWVDSDSGERPGSTCDDSSAATASRAPLSRPHSAGGAAATGKANGKGEVRPAQAKQGRKCPHGRHRYICKDCGGKGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGYTGQCRHTHLLTGDGSSALPSSVRVLQFARAMLWHTTAQPEVRAGRNTFRVCHRTLRLAGKGEQKMQNCGRDDEGSRRNTS
Sbjct:    1 MSEPDGTQGPSLVPQDRALVAQLAELLRKHEQXXXXXXXXXXXXXXXXXXXXXXXXHLMRRALQEIRQQXQKIQKLEDAHGVTVRHMQRQNERLRELEELNKQQRATEAQQXXQRQATDGVRTAHDVDTRAQQGAVILRGGIRGYRQSSPLPSMAKCKPVRKALTARAADGNDDCSGDDDSIASLDDATYSAGSDASDSTWVDSDSGERPGSTCDDSSAATASRAPLSRPHSAGGAAATGKANGKGEVRPAQAKQGRKCPHGRHRYICKDCGGKGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGYTGQCRHTHLLTGDGSSALPSSVRVLQFARAMLWHTTAQPEVRAGRNTFRVCHRTLRLAGKGEQKMQNCGRDDEGSRRNTS 411
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BLAST of jgi.p|Trimin1|354680 vs. uniprot
Match: A0A835YU07_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU07_9STRA)

HSP 1 Score: 219 bits (557), Expect = 1.820e-64
Identity = 125/147 (85.03%), Postives = 129/147 (87.76%), Query Frame = 1 
Query:  217 IQKLEDAHGVTVRHMQRQNERLRELEELNKQQRATEAQQXXQRQATDGVRTAHDVDTRAQQGAVILRGGIRGYRQSSPLPSMAKCKPVRKALTARAADGNDDCSGDDDSIASLDDATYSAGSDASDSTWVDSDSGERPGSTCDDSSA 657
            IQ LEDAH V VRH+QRQNERLRELEELNKQQRATE   XX RQATDGVRTAHDVDTRAQQGA IL  G+RGYRQSSPL S  K K VRKALTARAA G+DDCSGDD SIASLDDATYSAGSDASDS WVDSDSGE+PGSTCDDSSA
Sbjct:   39 IQNLEDAHVVAVRHLQRQNERLRELEELNKQQRATEXXXXXXRQATDGVRTAHDVDTRAQQGAGILGAGVRGYRQSSPLLSARKHKTVRKALTARAAGGDDDCSGDDYSIASLDDATYSAGSDASDSIWVDSDSGEQPGSTCDDSSA 185
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BLAST of jgi.p|Trimin1|354680 vs. uniprot
Match: A0A835YMQ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMQ1_9STRA)

HSP 1 Score: 125 bits (315), Expect = 6.780e-28
Identity = 95/208 (45.67%), Postives = 111/208 (53.37%), Query Frame = 1 
Query:  226 LEDAHGVTVRHMQRQN----ERLRELEELNKQQR---------------------------ATEAQQXXQRQATDGVRTAHDVDTRAQQGAVILRGGIRGYRQSSPLPSMAKCKP------------------------VRKALTARAA-DGNDDCSGDDDSIASLDD------------ATYSAGSDASDSTWVDSDSGERPGSTCD 645
            LED HG+ VR +QRQN    ERLR+L+E+NKQQR                           ATEAQQ  QRQ T+GVRTAH V  RA Q A +L GG++GYRQ SPLPS AK  P                        VR+ALTA  A +G+DDCSGDD +I SLDD            A  S     +DST++DSDSGER GSTCD
Sbjct:    5 LEDEHGIAVRDLQRQNGQQQERLRQLQEVNKQQRVASEXXXXXXXXXXXXXXXXXXXXXXRATEAQQRQQRQVTNGVRTAHGVKFRAPQHAGMLGGGVQGYRQISPLPSPAKRNPQPSTTATXXXXXGGDAHTAAVTGLVREALTAPGAGEGDDDCSGDDHNIHSLDDDAEANSSVSQEEAQISCQESEADSTYIDSDSGERAGSTCD 212
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BLAST of jgi.p|Trimin1|354680 vs. uniprot
Match: A0A835Z7P8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7P8_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 3.210e-7
Identity = 73/200 (36.50%), Postives = 89/200 (44.50%), Query Frame = 1 
Query:  265 RQNERLRELEELNKQQRA-----------------------------TEAQQXXQRQATDGVRTAHDVDTRAQQGAVILRGGIRGYRQSSPLP------------------------SMAKCKPVRKALTARAADGNDD-CSGDDDSIASLD-DATY-------------------------SAGSDASDSTWVDSDSGE 624
            RQ +RLRELEE NK+QRA                             +EA+Q    QAT  VRTAH  +   QQGA +L G  R  RQSS +P                        + A  +PV +ALTA  A G+DD CSG+D +I SLD DA +                         SAGSDASDST+V SD+GE
Sbjct:   58 RQQQRLRELEEDNKRQRAASEQXXXXXXXXXXXXXXXXVTIANQRRTSEAKQQQHCQATGVVRTAHGAE---QQGAGMLGGDERVNRQSSLVPPTEEGEPQIPATETAGGSGGGISHTKAVTRPVGEALTAGDAGGSDDDCSGNDHNIHSLDVDANHDSVSQEVAENSCHESETHTDTGDACSAGSDASDSTYVCSDNGE 254
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BLAST of jgi.p|Trimin1|354680 vs. uniprot
Match: A0A835Z6U3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6U3_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 6.870e-6
Identity = 76/214 (35.51%), Postives = 86/214 (40.19%), Query Frame = 1 
Query:  409 ILRGGIRGYRQSSPLP------------------------SMAKCKPVRKALTARAADGND-DCSGDDDSIASLD-DATY-------------------------SAGSDASDSTWVDSDSGERPGSTC------DDSS-----------------------------------AATASRAPLSRPHSAGGAAATGKANGKGEVRPAQAKQGRK 774
            +L GG RG RQSS +P                        + A  +PV +ALTA  A G+D DCSGDD SI SLD DA +                         SAGSDASDST+V SDSGER    C      DDSS                                   AA AS A  SR  S G AA TGK  GKG  +  + KQ RK
Sbjct:    1 MLGGGARGNRQSSLVPFSEEREPQAPATTTAGGSGGGICLTKAVTRPVGEALTAGDAGGSDGDCSGDDHSIHSLDVDANHDSVGQEVAENSSHESETNTDAGGACSAGSDASDSTYVCSDSGERFTGMCEERVVADDSSDADSYARGSDSSSNFKPIRKCARIAGVASSNPRRRAAAASDALRSRAFSTGDAAGTGKTKGKGSAKRPRPKQQRK 214
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BLAST of jgi.p|Trimin1|354680 vs. uniprot
Match: A0A835YMQ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMQ4_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 1.200e-5
Identity = 66/199 (33.17%), Postives = 96/199 (48.24%), Query Frame = 1 
Query:  190 QEIRQQXQKIQKLEDAHGVTVRHMQRQNERLRELEE-----LNKQQRATEA--QQXXQRQATDGVRTAHDVDTRAQQGAVILRGGIRGYRQSSPLPSMAKCKPVRKALTARAADGNDDCSG--------------DDDSIASLDDATY--------------------SAGSDASDSTWVDSDSGERP--GSTCDDSSA 657
            Q+ R+Q   +QKLE+ +       +++  RLRELEE     +  QQRA  A  +Q  Q Q TDG+RTA+ V+T+ QQGA +L G    ++ S+    M    P   + ++    G +  +G              D+D+   +   +                     S GSDA DST++DSDSGER   GSTCD+SSA
Sbjct:   11 QQNRRQHDWLQKLEEVNKRQRAASEQRQGRLRELEEQLRITIENQQRAMGAGSEQLQQWQLTDGMRTAYGVETKLQQGAGMLGGD--NHQLSTLHAEMQTKSPTTASTSSSHCGGGNAHTGAVTRPRRRLQHPSLDNDTKLEVGSVSLEVAENSCQEREEGTDAGGGNSGGSDACDSTYIDSDSGERAQAGSTCDESSA 207
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354680 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A835YUC7_9STRA7.610e-215100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YU07_9STRA1.820e-6485.03Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835YMQ1_9STRA6.780e-2845.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z7P8_9STRA3.210e-736.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z6U3_9STRA6.870e-635.51Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YMQ4_9STRA1.200e-533.17Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_380contigContig_380:4875..8275 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|354680|estExt_Genemark1.C_Ctg_3800003
Hectar predicted targeting categoryother localisation
TranscriptId355002
TrackFilteredModels1
ProteinId354680
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354680gene_18866Tribonema minus UTEX_B_3156 geneContig_380 4875..8275 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354680Trimin1|354680|estExt_Genemark1.C_Ctg_3800003Tribonema minus UTEX_B_3156 polypeptideContig_380 5148..8275 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_18866_6exon_18866_6Tribonema minus UTEX_B_3156 exonContig_380 4875..5158 -
exon_18866_5exon_18866_5Tribonema minus UTEX_B_3156 exonContig_380 5300..5357 -
exon_18866_4exon_18866_4Tribonema minus UTEX_B_3156 exonContig_380 6034..6171 -
exon_18866_3exon_18866_3Tribonema minus UTEX_B_3156 exonContig_380 6522..6570 -
exon_18866_2exon_18866_2Tribonema minus UTEX_B_3156 exonContig_380 7174..7495 -
exon_18866_1exon_18866_1Tribonema minus UTEX_B_3156 exonContig_380 7618..8275 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_18866UTR3_18866Tribonema minus UTEX_B_3156 three_prime_UTRContig_380 4875..5147 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_18866CDS_18866Tribonema minus UTEX_B_3156 CDSContig_380 7618..8275 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_18866 ID=mRNA_18866|Name=jgi.p|Trimin1|354680|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1509bp|location=Sequence derived from alignment at Contig_380:4875..8275- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGTCAGAGCCTGACGGGACTCAAGGCCCGTCGCTGGTGCCGCAAGATAG
GGCGCTCGTGGCACAGCTGGCGGAGCTCTTGCGCAAGCATGAGCAGCAGG
AAGAGCGACAGCAGCAGGAGCAGCAGCGTCAGCAGCAGCAACACCAGCAG
GACGAGCAACAGCAGCGGCACCTGATGAGACGCGCGCTGCAGGAGATCCG
GCAGCAGCAGCAAAAGATACAGAAACTGGAGGATGCTCACGGTGTCACAG
TTCGACACATGCAACGGCAAAACGAGCGGCTGCGGGAACTGGAGGAGTTG
AACAAGCAGCAGCGCGCGACGGAGGCTCAGCAGCAGCAGCAGCGGCAGGC
AACAGATGGGGTGCGCACGGCGCATGACGTGGACACCAGGGCGCAGCAGG
GTGCGGTCATTCTCAGAGGGGGCATTCGGGGCTACCGTCAGTCCTCGCCG
CTACCGTCCATGGCGAAATGCAAACCCGTGAGGAAGGCGTTGACTGCGCG
TGCTGCCGACGGCAACGACGACTGCAGCGGCGATGACGACAGCATCGCCT
CGCTGGACGATGCCACCTACAGCGCCGGCTCGGACGCCTCCGACAGCACA
TGGGTCGACAGCGACTCCGGAGAGCGTCCTGGCAGCACATGCGACGACAG
TTCGGCGGCGACCGCATCCCGTGCGCCGCTGTCGCGGCCTCACAGCGCTG
GCGGTGCAGCTGCGACAGGGAAGGCGAACGGCAAAGGGGAGGTCAGGCCC
GCGCAAGCGAAGCAGGGGCGCAAGTGTCCGCACGGCAGGCATCGCTATAT
CTGCAAGGACTGCGGCGGTAAGGGGATATGCCAGCACGGCAGAGAGCGCC
GCAGGTGCAAGGACTGTGGGGGTGCGGGGGTCTGCGAGCACGGCAGGCGA
CGCCGCGACTGCAAGGACTGTGGTGGTGCGGGGATCTGCGAGCACCGGAG
GGAGCGCCGCAAGTGCAAGCACTGTGGAGGAGCTGCGGGCTACACGGGCC
AGTGTCGCCACACGCACCTGCTCACGGGCGACGGCAGCAGTGCTCTCCCA
TCGTCCGTGCGCGTGTTACAGTTTGCGCGCGCCATGCTGTGGCACACAAC
TGCCCAGCCTGAGGTGCGCGCCGGTCGGAACACCTTCAGAGTCTGCCACC
GCACGCTGCGGCTCGCGGGCAAGGGTGAACAAAAGATGCAAAACTGCGGA
AGAGATGATGAGGGCAGCAGGAGAAACACGTCGTGACGTGCTCCCGGTGC
GAGCCGCTGCGTGCCGCGGCCGCCTCCAAAGGGGCAGTAAACTGGTCCGA
CCAGCGCACGTGCGCACCTGGGTAGTCGTGTGATGGCTACGCGGCAAGGC
GCACGCAAGTGGTAAACGCACGGACGCTGGGGGGGCCCTATTGGCATCCT
GCTGCCGCCTACTAAGTAGGCAGCTGCTGTACCCCGGACACCCCGATGAA
GCTACCCTGCGCACTAGAACGCACTGCAACACCCCCCCCCCCCCCCCCCC
GCACCCCCC
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protein sequence of jgi.p|Trimin1|354680

>Trimin1|354680|estExt_Genemark1.C_Ctg_3800003 ID=Trimin1|354680|estExt_Genemark1.C_Ctg_3800003|Name=jgi.p|Trimin1|354680|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=412bp
MSEPDGTQGPSLVPQDRALVAQLAELLRKHEQQEERQQQEQQRQQQQHQQ
DEQQQRHLMRRALQEIRQQQQKIQKLEDAHGVTVRHMQRQNERLRELEEL
NKQQRATEAQQQQQRQATDGVRTAHDVDTRAQQGAVILRGGIRGYRQSSP
LPSMAKCKPVRKALTARAADGNDDCSGDDDSIASLDDATYSAGSDASDST
WVDSDSGERPGSTCDDSSAATASRAPLSRPHSAGGAAATGKANGKGEVRP
AQAKQGRKCPHGRHRYICKDCGGKGICQHGRERRRCKDCGGAGVCEHGRR
RRDCKDCGGAGICEHRRERRKCKHCGGAAGYTGQCRHTHLLTGDGSSALP
SSVRVLQFARAMLWHTTAQPEVRAGRNTFRVCHRTLRLAGKGEQKMQNCG
RDDEGSRRNTS*
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mRNA from alignment at Contig_380:4875..8275-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_18866 ID=mRNA_18866|Name=jgi.p|Trimin1|354680|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3401bp|location=Sequence derived from alignment at Contig_380:4875..8275- (Tribonema minus UTEX_B_3156 )
ATGTCAGAGCCTGACGGGACTCAAGGCCCGTCGCTGGTGCCGCAAGATAG
GGCGCTCGTGGCACAGCTGGCGGAGCTCTTGCGCAAGCATGAGCAGCAGG
AAGAGCGACAGCAGCAGGAGCAGCAGCGTCAGCAGCAGCAACACCAGCAG
GACGAGCAACAGCAGCGGCACCTGATGAGACGCGCGCTGCAGGAGATCCG
GCAGCAGCAGCAAAAGATACAGAAACTGGAGGATGCTCACGGTGTCACAG
TTCGACACATGCAACGGCAAAACGAGCGGCTGCGGGAACTGGAGGAGTTG
AACAAGCAGCAGCGCGCGACGGAGGCTCAGCAGCAGCAGCAGCGGCAGGC
AACAGATGGGGTGCGCACGGCGCATGACGTGGACACCAGGGCGCAGCAGG
GTGCGGTCATTCTCAGAGGGGGCATTCGGGGCTACCGTCAGTCCTCGCCG
CTACCGTCCATGGCGAAATGCAAACCCGTGAGGAAGGCGTTGACTGCGCG
TGCTGCCGACGGCAACGACGACTGCAGCGGCGATGACGACAGCATCGCCT
CGCTGGACGATGCCACCTACAGCGCCGGCTCGGACGCCTCCGACAGCACA
TGGGTCGACAGCGACTCCGGAGAGCGTCCTGGCAGCACATGCGACGACAG
TTCGGCGGGTGACGGTGGCAGTGGCGCAGGCAGCAACGCTTGGGACTCCG
ACAGTAGTGATAGCTGCAAGCCGCGAGGAAGTGCGCACGCATCGCCGGTG
TCGCAGACGGCATGCCTCGCCAACGCGCAGCGACCGCATCCCGTGCGCCG
CTGTCGCGGCCTCACAGCGCTGGCGGTGCAGCTGCGACAGGGAAGGCGAA
CGGCAAAGGGGAGGTCAGGCCCGCGCAAGCGAAGCAGGGGCGCAAGTGTC
CGCACGGCAGGCATCGCTATATCTGCAAGGACTGCGGCGGTAAGGGGATA
TGCCAGCACGGCAGAGAGCGCCGCAGGTGCAAGGACTGTGGGGGTGCGGG
GGTCTGCGAGCACGGCAGGCGACGCCGCGACTGCAAGGACTGTGGTGGTG
CGGGGATCTGCGAGCACCGGAGGGAGCGCCGCAAGTGCAAGCACTGTGGA
GGGTCGGGGATGTGCGAGCATAACAGGCGGCGTTACTACTGCAGGGATTG
TGGTGAAGCGGGCATGTGCGAGCATGGCAAGCGGCGCGGCCGTTGCAATG
CCTGCAAACAGCGCCGCAGTACATGAAGGCGCTCTAGTATCATGCACTTG
GTTTGCCTCTCCCGGAAATGCCACAATCCATACTGCCTCTGTCACATCTG
CCTGCTTCTTACTTGCTGGTTCTTTTCTGCCACACTGATGTCAGGATGCC
GCCATCACCCGCACTGGCCATAATTGCCTTGCGTTGCCTGCTTAGCTGCT
ATCCACATGAATTGTACCAGGTTCATCTGCTGTGCGAGCCACCAGCCTGC
TCGCTCTTGCAAAGCTGCATGCCAAGCACATGTGTTTGGTCTGACTGGGG
TGCAAATTTCGCGCGCTGGCAACGTGTGACATGCTGCGCGGTCGCGACGC
AGAGGCTGCCGCCAAAGACGCGCTGCCAATCATATGCGTGATACTAACAT
AGAAGTATGTGCGAATGCGGAGGCGTTGTCTTTGCTGTCGGCTTGATACA
CTGTGTAGCTGAATCGCCGCTGCTTAACACGGATTCCGCGTAACTCTCGC
GCGAGAGCTGCGGGCTACACGGGCCAGTGTCGCCACACGCACCTGCTCAC
GGGCGTACCCAAAGAATCTGCCACTGTGATACTGCTTGCATTTTAAATGT
TGCCCCTCTAAGCGGCTCGCAGCAGTGGACGGTTGCATGATCAGTCTCAA
AAGTGCTTGTTCCCGTCAATGACGTGCCGTCATCATAGCAGCATGCGCTC
GAGCGCTGTGGCCTCGTCTCCAAGCAGGAGATGTAGGTGCTGGACGCAGA
GTGCGGGGCTGCTGGCTCGGCAGCACACGCGCGCAAGCGGGGTGGGGAAG
CTGGAAAGGGGTGTGCGTGGGGGGGGGGAAGGGGGCTGTTGCAGTACGTT
CTGGCACTCAAGGTAGTGTGACAGGGTACAGCAGCTGCCCGCAGGCGGCA
GCAGGACGGCAGCAGTGCTCTCCCATCGTCCGTGCGCGTGTTACAGTTTG
CGCGCGCCATGCTGTGGCACACAACTGCCCAGCCTGAGGTGCGCGCCGGT
CGGAACACCTTCAGAGTCTGCCACCGCACGCTGCGGCTCGCGGTACCGGA
AGCTCGTCACGACGTGTCTCCAGGGGGGGGCACAGCGGATGCCTCCCCCT
CCCACTGGTTCAAGAGGAGTAAATTACGCCACAACAACGAATTGCCGCCA
AACCTGTTCCTCCAGTGTTGCATCTTGGTTCGCCCTTGTCCAGGGGGGCA
GGGGGGGTCCAGCACATTCCCCGCTCCACTTCCCCCCTGAGCACATTCCA
AGGACAGGTGCTGCTGTCGAGCAAAAGTATTTGATCAATGCAATCATTGC
ATTGCAATGCCATGCTGCTGCTGCGCTCCACTGGGTTCAGTCTGGTACAG
CACTACAAACCACAATTGTTTTTAAAGGACTTCATTCATGCAGCTCATTG
CCTGAATCAACCTTGTGCTCCTGAGATCAGCACCACCGCCACATTCAACG
AAGCATCACAGAGCATCGTTGCATTGTGCAGTACAGCAACTTATCGTGCA
CGTTTGCGTTTGTTCTCGGACATTTGCAGCCTGCATGTTGGTGCTTGCTG
TAAGGCACATGTTGGCACATGAGGTTCATGCATAGTGGTGGTGCGTACCT
TGGGCCCAGGGCAAACATTCACTTCTCTGGCAAGTTGTTCTTAGGTTCTG
GTCCCTTGCAAACACGGAACGCCTTAGAGCCAGAATGAAACCACAAGGAC
TCCCCTCCCCCCACCCAGGGCAAGGGTGAACAAAAGATGCAAAACTGCGG
AAGAGATGATGAGGGCAGCAGGAGAAGTGCGTCTAAGTTTACAGCGGAGC
TGCCGACAATGGCTCTGCATCCGCGTCATGTCTATGCTCGGCGGCTCTTC
GCCGTTGTGGTATGAATCGATTTGGTTCAACCAGTGGAGGGGGGGGCGTC
CGCTGCGCCCCCCCCAGACACGTCGTGACGTGCTCCCGGTGCGAGCCGCT
GCGTGCCGCGGCCGCCTCCAAAGGGGCAGTAAACTGGTCCGACCAGCGCA
CGTGCGCACCTGGGTAGTCGTGTGATGGCTACGCGGCAAGGCGCACGCAA
GTGGTAAACGCACGGACGCTGGGGGGGCCCTATTGGCATCCTGCTGCCGC
CTACTAAGTAGGCAGCTGCTGTACCCCGGACACCCCGATGAAGCTACCCT
GCGCACTAGAACGCACTGCAACACCCCCCCCCCCCCCCCCCCGCACCCCC
C
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Coding sequence (CDS) from alignment at Contig_380:4875..8275-

>mRNA_18866 ID=mRNA_18866|Name=jgi.p|Trimin1|354680|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1236bp|location=Sequence derived from alignment at Contig_380:4875..8275- (Tribonema minus UTEX_B_3156 )
ATGTCAGAGCCTGACGGGACTCAAGGCCCGTCGCTGGTGCCGCAAGATAG
GGCGCTCGTGGCACAGCTGGCGGAGCTCTTGCGCAAGCATGAGCAGCAGG
AAGAGCGACAGCAGCAGGAGCAGCAGCGTCAGCAGCAGCAACACCAGCAG
GACGAGCAACAGCAGCGGCACCTGATGAGACGCGCGCTGCAGGAGATCCG
GCAGCAGCAGCAAAAGATACAGAAACTGGAGGATGCTCACGGTGTCACAG
TTCGACACATGCAACGGCAAAACGAGCGGCTGCGGGAACTGGAGGAGTTG
AACAAGCAGCAGCGCGCGACGGAGGCTCAGCAGCAGCAGCAGCGGCAGGC
AACAGATGGGGTGCGCACGGCGCATGACGTGGACACCAGGGCGCAGCAGG
GTGCGGTCATTCTCAGAGGGGGCATTCGGGGCTACCGTCAGTCCTCGCCG
CTACCGTCCATGGCGAAATGCAAACCCGTGAGGAAGGCGTTGACTGCGCG
TGCTGCCGACGGCAACGACGACTGCAGCGGCGATGACGACAGCATCGCCT
CGCTGGACGATGCCACCTACAGCGCCGGCTCGGACGCCTCCGACAGCACA
TGGGTCGACAGCGACTCCGGAGAGCGTCCTGGCAGCACATGCGACGACAG
TTCGGCGGCGACCGCATCCCGTGCGCCGCTGTCGCGGCCTCACAGCGCTG
GCGGTGCAGCTGCGACAGGGAAGGCGAACGGCAAAGGGGAGGTCAGGCCC
GCGCAAGCGAAGCAGGGGCGCAAGTGTCCGCACGGCAGGCATCGCTATAT
CTGCAAGGACTGCGGCGGTAAGGGGATATGCCAGCACGGCAGAGAGCGCC
GCAGGTGCAAGGACTGTGGGGGTGCGGGGGTCTGCGAGCACGGCAGGCGA
CGCCGCGACTGCAAGGACTGTGGTGGTGCGGGGATCTGCGAGCACCGGAG
GGAGCGCCGCAAGTGCAAGCACTGTGGAGGAGCTGCGGGCTACACGGGCC
AGTGTCGCCACACGCACCTGCTCACGGGCGACGGCAGCAGTGCTCTCCCA
TCGTCCGTGCGCGTGTTACAGTTTGCGCGCGCCATGCTGTGGCACACAAC
TGCCCAGCCTGAGGTGCGCGCCGGTCGGAACACCTTCAGAGTCTGCCACC
GCACGCTGCGGCTCGCGGGCAAGGGTGAACAAAAGATGCAAAACTGCGGA
AGAGATGATGAGGGCAGCAGGAGAAACACGTCGTGA
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