mRNA_18865 (mRNA) Tribonema minus UTEX_B_3156
|
Overview
Homology
BLAST of jgi.p|Trimin1|354679 vs. uniprot
Match: A0A835YV61_9STRA (Bicarbonate transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV61_9STRA) HSP 1 Score: 951 bits (2458), Expect = 0.000e+0 Identity = 525/525 (100.00%), Postives = 525/525 (100.00%), Query Frame = 1
Query: 1 MQQGAAQQLHAAEAVAEPEGSHEGPKLVEGFGKGLARDIKTRAPSYLSDFTDGLNIKTLSATFFLFFACLAPAVAFGGLMGVTTAGQIGTIEMIAATAGCGVVYSLTAGQPLTIIGSTGPVLAFTAVLYKTAVRLGLPFLPLYAWVGLWTSALLALASLFSLSNMVLYFTRFTDEIFGGLISVIFIYEALRDLSGLYVNPAVPLATALLSSAVAATTFGTATALRGLRTSPYLVKGARDVLADFAPTIGVVAGAXXXXXXXXRHGAAGALQTLAVPAAFTTTAGRPWRVPLLDLPPWARAAALVPALMSTVLLFMDQNITVRLVNAREHKLKKGFGLHLDMAAIAALVAGCSVLGLPWLVAATVRSLAHVRALARYERRDDGGGEAIAAMTETRVSGLAIHAAIGAAILFLRPALARIPLAVLMGLFLYLGAGGLQGNQMAARVALLFTDPAQRPRVPWVTDVKVAKTHLFTGVQLAALSAMVAVKSSPAGVLFPVIIALLAPLRIALERCGLFSKQEMDVLDAE 1575
MQQGAAQQLHAAEAVAEPEGSHEGPKLVEGFGKGLARDIKTRAPSYLSDFTDGLNIKTLSATFFLFFACLAPAVAFGGLMGVTTAGQIGTIEMIAATAGCGVVYSLTAGQPLTIIGSTGPVLAFTAVLYKTAVRLGLPFLPLYAWVGLWTSALLALASLFSLSNMVLYFTRFTDEIFGGLISVIFIYEALRDLSGLYVNPAVPLATALLSSAVAATTFGTATALRGLRTSPYLVKGARDVLADFAPTIGVVAGAXXXXXXXXRHGAAGALQTLAVPAAFTTTAGRPWRVPLLDLPPWARAAALVPALMSTVLLFMDQNITVRLVNAREHKLKKGFGLHLDMAAIAALVAGCSVLGLPWLVAATVRSLAHVRALARYERRDDGGGEAIAAMTETRVSGLAIHAAIGAAILFLRPALARIPLAVLMGLFLYLGAGGLQGNQMAARVALLFTDPAQRPRVPWVTDVKVAKTHLFTGVQLAALSAMVAVKSSPAGVLFPVIIALLAPLRIALERCGLFSKQEMDVLDAE
Sbjct: 1 MQQGAAQQLHAAEAVAEPEGSHEGPKLVEGFGKGLARDIKTRAPSYLSDFTDGLNIKTLSATFFLFFACLAPAVAFGGLMGVTTAGQIGTIEMIAATAGCGVVYSLTAGQPLTIIGSTGPVLAFTAVLYKTAVRLGLPFLPLYAWVGLWTSALLALASLFSLSNMVLYFTRFTDEIFGGLISVIFIYEALRDLSGLYVNPAVPLATALLSSAVAATTFGTATALRGLRTSPYLVKGARDVLADFAPTIGVVAGAXXXXXXXXRHGAAGALQTLAVPAAFTTTAGRPWRVPLLDLPPWARAAALVPALMSTVLLFMDQNITVRLVNAREHKLKKGFGLHLDMAAIAALVAGCSVLGLPWLVAATVRSLAHVRALARYERRDDGGGEAIAAMTETRVSGLAIHAAIGAAILFLRPALARIPLAVLMGLFLYLGAGGLQGNQMAARVALLFTDPAQRPRVPWVTDVKVAKTHLFTGVQLAALSAMVAVKSSPAGVLFPVIIALLAPLRIALERCGLFSKQEMDVLDAE 525
BLAST of jgi.p|Trimin1|354679 vs. uniprot
Match: D7FMX9_ECTSI (Boron transporter 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMX9_ECTSI) HSP 1 Score: 570 bits (1469), Expect = 1.360e-193 Identity = 317/501 (63.27%), Postives = 379/501 (75.65%), Query Frame = 1
Query: 76 KLVEGFGKGLARDIKTRAPSYLSDFTDGLNIKTLSATFFLFFACLAPAVAFGGLMGVTTAGQIGTIEMIAATAGCGVVYSLTAGQPLTIIGSTGPVLAFTAVLYKTAVRLGLPFLPLYAWVGLWTSALLALASLFSLSNMVLYFTRFTDEIFGGLISVIFIYEALRDLSGLYVNPAVPLATALLSSAVAATTFGTATALRGLRTSPYLVKGARDVLADFAPTIGVVAGAXXXXXXXXRHGAAGALQTLAVPAAFTTTAGRPWRVPLLDLPPWARAAALVPALMSTVLLFMDQNITVRLVNAREHKLKKGFGLHLDMAAIAALVAGCSVLGLPWLVAATVRSLAHVRALARYERRDDGGGEAIAAMTETRVSGLAIHAAIGAAILFLRPALARIPLAVLMGLFLYLGAGGLQGNQMAARVALLFTDPAQRPRV-PWVTDVKVAKTHLFTGVQLAALSAMVAVKSSPAGVLFPVIIALLAPLRIALERCGLFSKQEMDVLDAE 1575
KLVEGFGKGL DIK +AP SD TDG +IK LS FFLFFACLAPAVAFGG++GV TAG +GTIEMIAATA CG+VY+ AGQPLTIIGSTGPVLAF AVLYKTA R+ LPFLPLY WVG WT+ +L +AS FSLSNMVL+FTRFTDEIF LISVIFI EA +D++G++ + VPL A + VA +T+G AT L+ LR + +L K R+ +ADFAPT+GV G R+ A AL TL VP+A TTT GRPW VP + LP WAR AA PALMSTVLLFMDQNITVRLVNA++HKLKKG+G++LDM IA L A CSV GLPWLVAATVRSLAHV++L +Y++ G GE IA + E RVSG+AIH IG AIL LRP LA+IPL V GLFLYLG GL GN+M R LLFTDP RP+ PW + + +KT+++T +QLA L +M+ VK SP GVLFPV+IALLAPLR+ L + LF++ ++ VLD+E
Sbjct: 291 KLVEGFGKGLLADIKGKAPFLKSDITDGFSIKVLSTIFFLFFACLAPAVAFGGMLGVATAGAMGTIEMIAATAVCGMVYAALAGQPLTIIGSTGPVLAFIAVLYKTAARMSLPFLPLYTWVGFWTAGMLGVASAFSLSNMVLFFTRFTDEIFSLLISVIFIMEATKDITGVFASAGVPLVAATSTLVVALSTYGVATILKSLRRTQFLNKPIREFIADFAPTLGVATGTLAAMWGKSRY--ALALPTLTVPSALTTTVGRPWLVPFMTLPVWARWAAFFPALMSTVLLFMDQNITVRLVNAKQHKLKKGYGMNLDMGIIAGLTAACSVFGLPWLVAATVRSLAHVKSLTKYDQLGWGRGERIAGVAEQRVSGIAIHGLIGVAILKLRPLLAQIPLPVTTGLFLYLGVTGLAGNEMWDRTKLLFTDPKLRPKAAPW-SRLPASKTNMYTMIQLACLGSMMWVKGSPIGVLFPVLIALLAPLRMLLVKTPLFTEGDLSVLDSE 788
BLAST of jgi.p|Trimin1|354679 vs. uniprot
Match: A0A4D9DEQ9_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DEQ9_9STRA) HSP 1 Score: 545 bits (1405), Expect = 1.530e-186 Identity = 299/500 (59.80%), Postives = 371/500 (74.20%), Query Frame = 1
Query: 76 KLVEGFGKGLARDIKTRAPSYLSDFTDGLNIKTLSATFFLFFACLAPAVAFGGLMGVTTAGQIGTIEMIAATAGCGVVYSLTAGQPLTIIGSTGPVLAFTAVLYKTAVRLGLPFLPLYAWVGLWTSALLALASLFSLSNMVLYFTRFTDEIFGGLISVIFIYEALRDLSGLYVNPAVPLATALLSSAVAATTFGTATALRGLRTSPYLVKGARDVLADFAPTIGVVAGAXXXXXXXXRHGAAGALQTLAVPAAFTTTAGRPWRVPLLDLPPWARAAALVPALMSTVLLFMDQNITVRLVNAREHKLKKGFGLHLDMAAIAALVAGCSVLGLPWLVAATVRSLAHVRALARYERRDDGGGEAIAAMTETRVSGLAIHAAIGAAILFLRPALARIPLAVLMGLFLYLGAGGLQGNQMAARVALLFTDPAQRPRVPWVTDVKVAKTHLFTGVQLAALSAMVAVKSSPAGVLFPVIIALLAPLRIALERCGLFSKQEMDVLDAE 1575
K++E KG+ D++ +AP YLSDF DG N+K ++ATFFLFFACLAPAVAFGGLMG T G IGT+EM+ ATA G+ Y+L +GQPLTIIGSTGPVLAFT VLY+TA L LPFLPLY+WVG+WTS +L L+S+ SLSN+V YFTRFTDEIF LIS+IF+YEA++DLS ++NP+V A ALLS +A TTF T+ L GLR K RDV+ADFAPTIGV+AG + A AL TL +P +F+T+ GRPW V + LP WAR AA +PALMS+VLLFMDQNITVRLVN+ HK+KKG+GLHLDM ++ L S+ GLPWLVAATVRSL HVRA AR++ +DG I +M E R++GLAIH+ IG AIL RP L ++PLAVLMGLFLYLG L GNQM R+ LL TDPAQRP+ W V + FTG+Q A L M A+KSSP GVLFP++IA LAP+R+A+E+ G F K+++++LD+E
Sbjct: 105 KILERPFKGIVEDVRRKAPHYLSDFKDGANVKGVAATFFLFFACLAPAVAFGGLMGKLTEGNIGTMEMLLATASNGIAYALFSGQPLTIIGSTGPVLAFTLVLYRTAQNLALPFLPLYSWVGIWTSLILFLSSVTSLSNLVNYFTRFTDEIFSLLISLIFLYEAVKDLSSFFINPSVGFAKALLSLVIAVTTFNTSITLAGLRRGKVFTKRVRDVIADFAPTIGVLAGCFLTALAKAKK--AEALPTLLIPDSFSTSLGRPWLVNIFALPIWARWAAFIPALMSSVLLFMDQNITVRLVNSPSHKIKKGYGLHLDMFVVSILTFINSLFGLPWLVAATVRSLNHVRACARFKSTEDGE-VVIESMQENRLTGLAIHSLIGVAILGFRPLLGQVPLAVLMGLFLYLGKSSLAGNQMWERLKLLITDPAQRPKAAWAQKVPFKVSAAFTGLQFACLGGMWALKSSPIGVLFPLLIAALAPIRVAIEKLGWFDKKDLEILDSE 601
BLAST of jgi.p|Trimin1|354679 vs. uniprot
Match: A0A7S4D862_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D862_HETAK) HSP 1 Score: 482 bits (1241), Expect = 1.830e-161 Identity = 278/500 (55.60%), Postives = 350/500 (70.00%), Query Frame = 1
Query: 79 LVEGFGKGLARDIKTRAPSYLSDFTDGLNIKTLSATFFLFFACLAPAVAFGGLMGVTTAGQIGTIEMIAATAGCGVVYSLTAGQPLTIIGSTGPVLAFTAVLYKTAVRLGLPFLPLYAWVGLWTSALLALASLFSLSNMVLYFTRFTDEIFGGLISVIFIYEALRDLSGLYVNPAVPLATALLSSAVAATTFGTATALRGLRTSPYLVKGARDVLADFAPTIGVVAGAXXXXXXXXRHGAAGALQTLAVPAAFTTTAGRPWRVPLLDLPPWARAAALVPALMSTVLLFMDQNITVRLVNAREHKLKKGFGLHLDMAAIAALVAGCSVLGLPWLVAATVRSLAHVRALARYERRDDGGGEAIAAMTETRVSGLAIHAAIGAAILFLRPALARIPLAVLMGLFLYLGAGGLQGNQMAARVALL-FTDPAQRP-RVPWVTDVKVAKTHLFTGVQLAALSAMVAVKSSPAGVLFPVIIALLAPLRIALERCGLFSKQEMDVLDA 1572
+VE F KGL RD K +AP Y+SD DG N+KTLSA FLFF C+APAVAFGG++ T IGT+EM+ +T+ CG++Y+L +GQPLTIIGSTGPVLAFT VLY+T LG PFLP+YAW GLW++ L LA++FSLSN+V FTRFTDE+F LIS IF+ EA++ + +P VPLA L + +A TT+ TA L+G++ +PYL + R VLADFAP++G+ AG R+ A + TL VPA F TT+GRPW V LL LPP AR A +PA M+ VLLFMDQ ITV LVNA L+KG+GLHLDMA +AAL AGCSV GLPWLVAATVRS+AHV L D+G G + + E RVSG AIHA I AAIL R LA+IPLAVL GLFLYLG L+GNQ+ R+ L+ DP ++P + D+ +T +Q+A L+A+ +K SP GVLFPV+IALL P+R A+ER G F+K+E+ VLDA
Sbjct: 131 VVEKFLKGLKRDAKAKAPYYISDIKDGFNLKTLSAVVFLFFGCIAPAVAFGGVLSKVTNNAIGTMEMLLSTSVCGMIYALLSGQPLTIIGSTGPVLAFTGVLYRTCAALGQPFLPVYAWTGLWSAGYLGLAAVFSLSNIVEGFTRFTDEVFSLLISAIFVAEAVQGVLRALTDPLVPLAQGLATLVLATTTYQTAVKLKGIKETPYLGRRRRQVLADFAPSLGIAAGVLGATLLKARNAGAALVPTLPVPAVFATTSGRPWAVDLLSLPPAARWACALPAAMAAVLLFMDQTITVHLVNATP-TLEKGYGLHLDMAVLAALTAGCSVFGLPWLVAATVRSVAHVNGLTTT---DEGTGRPVK-VAEQRVSGFAIHALILAAILVGRAQLAQIPLAVLSGLFLYLGTSSLRGNQLYERLKLVTVVDPRKKPPTAQFCADLPRRTVRKYTSLQMACLAALWLLKGSPVGVLFPVMIALLPPIRHAIERAGSFTKEELAVLDA 625
BLAST of jgi.p|Trimin1|354679 vs. uniprot
Match: A0A7S3UGS7_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3UGS7_9CHLO) HSP 1 Score: 476 bits (1225), Expect = 4.200e-160 Identity = 263/502 (52.39%), Postives = 341/502 (67.93%), Query Frame = 1
Query: 70 GPKLVEGFGKGLARDIKTRAPSYLSDFTDGLNIKTLSATFFLFFACLAPAVAFGGLMGVTTAGQIGTIEMIAATAGCGVVYSLTAGQPLTIIGSTGPVLAFTAVLYKTAVRLGLPFLPLYAWVGLWTSALLALASLFSLSNMVLYFTRFTDEIFGGLISVIFIYEALRDLSGLYVNPAVPLATALLSSAVAATTFGTATALRGLRTSPYLVKGARDVLADFAPTIGVVAGAXXXXXXXXRHGAAGALQTLAVPAAFTTTAGRPWRVPLLDLPPWARAAALVPALMSTVLLFMDQNITVRLVNAREHKLKKGFGLHLDMAAIAALVAGCSVLGLPWLVAATVRSLAHVRALARYERRDDGGGEAIAAMTETRVSGLAIHAAIGAAILFLRPALARIPLAVLMGLFLYLGAGGLQGNQMAARVALLFTDPAQRPRVPWVTDVKVAKTHLFTGVQLAALSAMVAVKSSPAGVLFPVIIALLAPLRIALERCGLFSKQEMDVLDAE 1575
G K+ + G G+ D+K +AP + SDF DG+N++ +++TFFLFF CLAPAVAFGG+M + T G IG +EMI ATAGCG VY+LT+GQP+TI+GSTGPVLA T+ LYK + LPFLP+YAWVGLW+S +L L +L S SN V T+FTDE+F LI+ IFI EAL+D LY++ ALLS+ V+ TT AT L R SP+ K R+ +ADFAPTIG+V R A L LAVP F + R W V L +P WAR AA VP +M TVLLF DQNIT RLVN+ E++LKKG G HLDMA ++ L A CSV GLPWLVAATVRS+ H+++L+ G GE I ++ E R++G +IH IG +++F R L+ IPLAVLMGLFLYLG ++GN RV L+ DP P++P TD+K++ TH FT +Q+ AL AM VK+S G+LFPV+IALL P+R LE+ +F+K+E+ VLD E
Sbjct: 49 GSKVFQPLGVGIVEDVKRKAPWFTSDFKDGINLRGVASTFFLFFGCLAPAVAFGGMMSLATGGLIGAVEMILATAGCGCVYALTSGQPITIVGSTGPVLALTSALYKMCLTYSLPFLPMYAWVGLWSSGMLMLCALTSTSNAVKLLTKFTDEVFSALIAAIFIAEALKDSLSLYLHAESGAEVALLSTLVSLTTLFVATTLANFRRSPFFNKKVRNTVADFAPTIGIVIATLVSMVVSNRF--AINLPMLAVPMEFAPSVPRAWVVNLFSVPLWARWAAAVPGVMVTVLLFFDQNITTRLVNSSENRLKKGHGYHLDMAVLSVLTAYCSVFGLPWLVAATVRSVNHLKSLSVMGPSPTGVGERIESVMENRLTGFSIHFLIGISLMFARSLLSMIPLAVLMGLFLYLGVSAIKGNSFLERVGLMMHDPELVPQLPHTTDIKISSTHKFTLIQIVALLAMYQVKNSKVGILFPVLIALLGPVRTGLEKMHVFTKEELHVLDGE 548
BLAST of jgi.p|Trimin1|354679 vs. uniprot
Match: A0A7S1Z6H0_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z6H0_9STRA) HSP 1 Score: 477 bits (1227), Expect = 5.400e-160 Identity = 274/522 (52.49%), Postives = 349/522 (66.86%), Query Frame = 1
Query: 40 AVAEPEGSHEGPKLVEGFGKGLARDIKTRAPSYLSDFTDGLNIKTLSATFFLFFACLAPAVAFGGLMGVTTAGQIGTIEMIAATAGCGVVYSLTAGQPLTIIGSTGPVLAFTAVLYKTAVRLGLPFLPLYAWVGLWTSALLALASLFSLSNMVLYFTRFTDEIFGGLISVIFIYEALRDLSGLYVNPAVPLATALLSSAVAATTFGTATALRGLRTSPYLVKGARDVLADFAPTIGVVAGAXXXXXXXXRHGAAGA-LQTLAVPAAFTTTAGRPWRVPLLDLPPWARAAALVPALMSTVLLFMDQNITVRLVNAREHKLKKGF-------GLHLDMAAIAALVAGCSVLGLPWLVAATVRSLAHVRALARYERRDDGGGEAIAAMTETRVSGLAIHAAIGAAILFLRPA--LARIPLAVLMGLFLYLGAGGLQGNQMAARVALLFTDPAQRPRVPWVTDVKVAKTHLFTGVQLAALSAMVAVKSSPAGVLFPVIIALLAPLRIALERCGLFSKQEMDVLDAE 1575
AVAE E + L EG G G+ RD K R P + SD DGLN + L+AT FLFFACLAPAV FG L V T IGT+EM+++TA CG++YSLT+ QPLTIIGSTGPVLAF A L + + + LPFLP+YAW GLW SA+L ++S+ S S++V Y TRFTDEIF LIS IF+ EAL D+ + +PA ALL+ A+TTFGTAT L+GLR + Y K RD L++FAPTIGVV + HGA A L +LA+P+ F TT+GRPW VPL+DLP WAR +PA+M+TVLLF+DQNITVR+VN +K++KG G+H DM I+ L A SV+GLPWLVAATVRS++HVRAL+ +++ + I E RV+G IH+ IGA+I F +P L +PL VLMGLF+YLG L GN+M R+ LF D + + W V LFT +Q+A L+AM VK SP GVLFPV+IALLAPLR L + G+ K+ MD+LD +
Sbjct: 63 AVAEEEEDNGSDTLFEGIGVGIKRDYKKRLPFFKSDIQDGLNTQCLAATLFLFFACLAPAVGFGALFSVATNHAIGTMEMVSSTAACGMIYSLTSAQPLTIIGSTGPVLAFVACLAQLSSAMSLPFLPVYAWTGLWVSAILFMSSITSASSLVKYLTRFTDEIFSVLISTIFVVEALSDVGRTFTSPASTFTKALLTLLCASTTFGTATFLKGLRNTTYFTKTVRDTLSNFAPTIGVVTASLIARWAKLTHGAGVASLPSLAIPSTFATTSGRPWLVPLMDLPVWARWGTFLPAIMATVLLFLDQNITVRVVNNPRYKMEKGRRKGNFIDGMHADMLIISILTALTSVVGLPWLVAATVRSISHVRALSTFDKEGN-----IKGTIEQRVTGFCIHSLIGASIFFAKPRNLLTHVPLPVLMGLFMYLGTSALPGNEMFERIKGLFKDDSVAKKEKWSDTVPKGVVRLFTAIQVACLAAMFWVKESPIGVLFPVVIALLAPLRFGLVKMGVIKKEYMDILDED 579
BLAST of jgi.p|Trimin1|354679 vs. uniprot
Match: B7FYF1_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FYF1_PHATC) HSP 1 Score: 465 bits (1197), Expect = 2.830e-155 Identity = 272/521 (52.21%), Postives = 353/521 (67.75%), Query Frame = 1
Query: 43 VAEPEGSHEGPKLVEGFGKGLARDIKTRAPSYLSDFTDGLNIKTLSATFFLFFACLAPAVAFGGLMGVTTAGQIGTIEMIAATAGCGVVYSLTAGQPLTIIGSTGPVLAFTAVLYKTAVRLGLPFLPLYAWVGLWTSALLALASLFSLSNMVLYFTRFTDEIFGGLISVIFIYEALRDLSGLYVNPAVPLATALLSSAVAATTFGTATALRGLRTSPYLVKGARDVLADFAPTIGVVAGAXXXXXXXXRHGAAGA-LQTLAVPAAFTTTAGRPWRVPLLDLPPWARAAALVPALMSTVLLFMDQNITVRLVNAREHKLKKGF-------GLHLDMAAIAALVAGCSVLGLPWLVAATVRSLAHVRALARYERRDDGGGEAIAAMTETRVSGLAIHAAIGAAILFLRPA--LARIPLAVLMGLFLYLGAGGLQGNQMAARVALLFTDPAQRPRVPWVTDVKVAKTHLFTGVQLAALSAMVAVKSSPAGVLFPVIIALLAPLRIALERCGLFSKQEMDVLDAE 1575
V E E + + L EG KG+ RD K R P + SD DGLN++ L+AT FLFFACLAPAV FGGL V T G IGT+EM+++TA CG++Y++T+ QPLTIIGSTGPVLAF A L + A L LPFL LY+W GLWTSA+L ++S+ S SN+V Y TRFTDEIF LIS IF++EA+ D+ + +PA ALL+ AA+TF AT L+GLR + R+ +++FAPTIGVV + HG A L +L++PA F TT+GRPW VP+LD P WAR AA +PALM+TVLLF+DQNITVRLVN K++KG G+H DM ++ L A S++G+PWLVAATVRSL+HV AL++Y++ G+ + + E R++G++IH+ IG A+LF +P L ++PL VLMGLF+YLG L GN+M RV LF D P+ W V T FT +Q+A L AM VK SP GVLFPV+IA+LAPLR ALE+ G+ K+ MDVLD E
Sbjct: 78 VDERENNKDDETLFEGPFKGIIRDYKARLPLFASDIKDGLNVQCLAATMFLFFACLAPAVGFGGLFDVATGGAIGTVEMVSSTALCGLIYAITSAQPLTIIGSTGPVLAFVACLAQLAKMLNLPFLQLYSWTGLWTSAILFVSSITSASNLVKYLTRFTDEIFSLLISCIFVFEAVSDVGRTFSSPASTFTKALLTLTCAASTFTIATLLKGLRKTSLFPSRVRNTISNFAPTIGVVTASLIARWARVVHGTKLAGLPSLSIPAVFGTTSGRPWLVPILDFPVWARWAAFLPALMATVLLFLDQNITVRLVNNPRWKMEKGRRKNNVLDGMHADMFIVSILTAAQSLVGIPWLVAATVRSLSHVGALSKYDKE----GKVVGTI-EQRMTGISIHSLIGCAVLFSKPRKLLTQVPLPVLMGLFMYLGTSSLPGNEMWERVTGLFKDKTVAPKQRWSDKVPDKVTSTFTLIQVACLGAMFWVKESPFGVLFPVVIAMLAPLRFALEKQGIIKKEYMDVLDEE 593
BLAST of jgi.p|Trimin1|354679 vs. uniprot
Match: A0A5B8MFK0_9CHLO (Bicarbonate transporter n=2 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MFK0_9CHLO) HSP 1 Score: 453 bits (1166), Expect = 9.060e-151 Identity = 257/518 (49.61%), Postives = 357/518 (68.92%), Query Frame = 1
Query: 31 AAEAVAEPEGSHEGPKLVEGFGKGLARDIKTRAPSYLSDFTDGLNIKTLSATFFLFFACLAPAVAFGGLMGVTTAGQIGTIEMIAATAGCGVVYSLTAGQPLTIIGSTGPVLAFTAVLYKTAVRLGLPFLPLYAWVGLWTSALLALASLFSLSNMVL-YFTRFTDEIFGGLISVIFIYEALRDLSGLYVNPAVPLATALLSSAVAATTFGTATALRGLRTSPYLVKGARDVLADFAPTIGVVAGAXXXXXXXXRHGAAGALQTLAVPAAFTTTAGRPWRVPLLDLPPWARAAALVPALMSTVLLFMDQNITVRLVNAREHKLKKGFGLHLDMAAIAALVAGCSVLGLPWLVAATVRSLAHVRALARYERRDDGGGEA--IAAMTETRVSGLAIHAAIGAAILFLRPALARIPLAVLMGLFLYLGAGGLQGNQMAARVALLFTDPAQRPRVPWVTDVKVAKTHLFTGVQLAALSAMVAVKSSPAGVLFPVIIALLAPLRIALERCGLFSKQEMDVLDAE 1575
AAE + E E S +VE GL RD+K R P Y+SD+T+GLN+K L++T F+FFACLAPAVAFG L+ V T G +G +EM+ +T+ CG+VY+L +GQP+TIIGSTGPVLAFTA++Y T ++ LPFL YAWVGLWTS +L L ++ S SN+V+ Y TRFTDEIF GLISVIF+ EA++++ L N V + ALLS A +T A +L GLR+S Y K ARD++A+F PTI +VA R+G L+ L +P+ + RPW V L+D P WAR A+ +PA+M ++L+F DQNIT RLVN++++K+KKG+G H+D+ +AA S+LG+PWLVAATVRS+ H+++L +E +G E + +TETRV+ AIHA IGA++L+ R LA+IP VLMGLFLYLG ++GN+ R+ L F D + P+VP+VTD+ + T FT +Q+A+L A+VA+K S G+LFPV+IA L + + R F+++E+ VLD E
Sbjct: 71 AAEEIPESELS-----IVETPFVGLKRDLKQRLPFYVSDYTEGLNLKCLASTLFMFFACLAPAVAFGSLLNVKTQGAMGALEMLVSTSICGMVYALFSGQPVTIIGSTGPVLAFTAIMYSTCQQMALPFLSTYAWVGLWTSGILGLCAVTSTSNLVIRYLTRFTDEIFAGLISVIFVVEAMKNIVSLLFNSGVSSSAALLSIMTAISTCAFALSLAGLRSSSYFNKKARDLVANFGPTISIVACTIACTWLATRYGIG--LEYLTLPSQIAPSTPRPWVVSLMDTPVWARWASSLPAVMVSILMFFDQNITTRLVNSKDNKMKKGYGYHVDLLIVAANTLVFSMLGMPWLVAATVRSVNHLKSLTTFEDVKEGDVETTKVVGVTETRVTNFAIHACIGASVLYARDLLAKIPQCVLMGLFLYLGLSAIKGNEFLERIELFFMDKKKMPKVPYVTDISLGATKKFTLLQIASLLALVALKESKYGILFPVVIAALQIILVLAVRAKWFTEKEIAVLDRE 581
BLAST of jgi.p|Trimin1|354679 vs. uniprot
Match: A0A0G4GX26_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GX26_VITBC) HSP 1 Score: 451 bits (1159), Expect = 9.950e-150 Identity = 265/506 (52.37%), Postives = 330/506 (65.22%), Query Frame = 1
Query: 67 EGPKLVEGFGKGLARDIKTRAPSYLSDFTDGLNIKTLSATFFLFFACLAPAVAFGGLMGVTTAGQIGTIEMIAATAGCGVVYSLTAGQPLTIIGSTGPVLAFTAVLYKTAVRLGLPFLPLYAWVGLWTSALLALASLFSLSNMVLYFTRFTDEIFGGLISVIFIYEALRDLSGLYVNPAVPLATALLSSAVAATTFGTATALRGLRTSPYLVKGARDVLADFAPTIGVVAGAXXXXXXXXRHGAAGALQTLAVPAAFTTTAGRPWRV--PLLDLPPWARAAALVPALMSTVLLFMDQNITVRLVNAREHKLKKGFGLHLDMAAIAALVAGCSVLGLPWLVAATVRSLAHVRALARYERRDDGG-GEAIAAMTETRVSGLAIHAAIGAAILFLRPALARIPLAVLMGLFLYLGAGGLQGNQMAARVALLFTDPAQRPRVPWVTDVKVAKTHLFTGVQLAALSAMVAVKSSPAGVLFPVIIALLAPLRIALERCGLFSKQEMDVLDAE 1575
E LVE F +G+ARD K R Y SD DG+++K LS+ FFLFF CLAPAVAFG M T GQIG+IEMI AT G++Y+ + QPLTIIGSTGPVLAFT+ LYK + LPFLP Y +GLW + L +A++FS+SN + Y TR+TDEIF LISVIF+YEAL SGL+ N AV +TA LS+ + A TF A L GLR SP+ + RD ADF PTI V G+ R+G L TL++P+A TT+ GRPW + L LP W R A +PALM TVLLFMDQNITVRLVN+ +HKLKK G LD+A + SVLGLPWLVAATVRSL HVR++ ++ G A+ E RV+GL IH I +++ R LA +P AVL GLFL+LG L GN+M R L T+P P+ PW V + K HLFT Q+A L+A+ +K S GV+FPVIIALL P+R+ALER FS +E+ VLD+E
Sbjct: 76 EAAPLVEPFWRGIARDAKARYALYRSDIVDGISLKALSSIFFLFFGCLAPAVAFGSAMAAATGGQIGSIEMIVATGMLGLIYAAFSAQPLTIIGSTGPVLAFTSALYKGCQAMQLPFLPTYVCIGLWNTLYLGIAAVFSMSNSIKYLTRWTDEIFSLLISVIFMYEALVYFSGLFTNTAVSASTAALSTGIGAFTFIAAVLLSGLRKSPFFNRFIRDKTADFGPTIAVAGGSGLAYLAYLRYGIR--LPTLSMPSALTTSTGRPWLMLRSLSSLPLWVRWGAALPALMCTVLLFMDQNITVRLVNSNKHKLKKPNGYDLDLATLTVTTGISSVLGLPWLVAATVRSLNHVRSVMNFDYSKGGDDSSAVVGCDEQRVTGLGIHTLILTSVILFRQQLALLPEAVLKGLFLFLGVSTLAGNEMWQRTKLFVTEPKLAPKRPWTNVVPLRKVHLFTAAQIACLAAVWLLKESSIGVMFPVIIALLHPIRVALERYKAFSAEEVAVLDSE 579
BLAST of jgi.p|Trimin1|354679 vs. uniprot
Match: A0A7S3ZVQ7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZVQ7_9STRA) HSP 1 Score: 448 bits (1153), Expect = 4.350e-149 Identity = 274/516 (53.10%), Postives = 336/516 (65.12%), Query Frame = 1
Query: 76 KLVEGFGKGLARDIKTRAPSYLSDFTDGLNIKTLSATFFLFFACLAPAVAFGGLMGVTTAGQIGTIEMIAATAGCGVVYSLTAGQPLTIIGSTGPVLAFTAVLYKTAVRLGLPFLPLYAWVGLWTSALLALASLFSLSNMVLYFTRFTDEIFGGLISVIFIYEALRDLS-GLYVNPAVPLATALLSSAVAATTFGTATALRGLRTSPYLVKGARDVLADFAPTIGVVAGAXXXXXXXXRHGAAGALQTLAVPAAFTTTAGRPWRVPLLDLPPWARAAALVPALMSTVLLFMDQNITVRLVNAREHKLKKGFGLHLDMAAIAALVAGCSVLGLPWLVAATVRSLAHVRALARYE----RRDDGGGEAIAAMTETRVSGLAIHAAIGAAILFLRPALARIPLAVLMGLFLYLGAGGLQGNQMAARVALLFTDP--------AQRPRV---PWVTDVKVAKTHLFTGVQLAALSAMVAVKSSPAGVLFPVIIALLAPLRIALERCGLFSKQEMDVLDAE 1575
KLVEGFG G+ RD+K R P Y SD DG+++K++SA +LFFACLAPAVAFG + G TT G IG +E +A+TA CGVVY+L + QPLTIIGSTGPVLAFT+VLY + +LG+PFLPLYAW GLW+S L L +LFS SN V TRFTDEIF LIS IF+YEA RD+ G +NP++ + A +A A TTFG+AT L R + L +G R+ LADFAP IG+ G R G LQ LA+PA F+TT+GRPW VPL LP R A +PALM VLLF DQNITVR+VNA +KLKK G H D+ ++ L AGCSV+G PWLVAATVRS+ HVRA + YE D E RV+GLAIHAAIG A+LF R LAR P A LMGLFLYLG L+GNQM AR L P A + + PW V T FT +Q+ L++M+ +K+SP GV FP+IIA L PLR + + L +EM +LD +
Sbjct: 49 KLVEGFGVGIRRDVKARLPFYKSDIKDGVSVKSVSALLYLFFACLAPAVAFGSVQGATTKGAIGAVEYVASTAICGVVYALASAQPLTIIGSTGPVLAFTSVLYGLSTKLGVPFLPLYAWTGLWSSLYLFLGALFSTSNGVTLLTRFTDEIFSNLISTIFVYEAARDVVFGALLNPSMAASEAFAVAATACTTFGSATWLAARRGAESLKRGVRNFLADFAPAIGICLGILAGGWCGARAGVP--LQKLAMPATFSTTSGRPWLVPLGALPVKYRWLASLPALMVAVLLFFDQNITVRIVNAESNKLKKPVGYHQDLLVVSLLAAGCSVVGFPWLVAATVRSINHVRANSVYEDVIQEGDCESSLEFVGCKEQRVTGLAIHAAIGGALLFGRKTLARTPKAALMGLFLYLGTSALKGNQMFARSTELLGGPLVDLDALDASQSKAKDRPWAA-VPRNVTRGFTLLQIGLLASMMLLKNSPLGVGFPIIIAALGPLRSLMLKTKLVKPEEMALLDQD 561 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354679 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_18865 ID=mRNA_18865|Name=jgi.p|Trimin1|354679|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1633bp|location=Sequence derived from alignment at Contig_380:1573..4791+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCAGCAGGGCGCCGCGCAGCAGTTGCATGCAGCAGAGGCAGTTGCGGAback to top protein sequence of jgi.p|Trimin1|354679 >Trimin1|354679|estExt_Genemark1.C_Ctg_3800002 ID=Trimin1|354679|estExt_Genemark1.C_Ctg_3800002|Name=jgi.p|Trimin1|354679|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=526bp MQQGAAQQLHAAEAVAEPEGSHEGPKLVEGFGKGLARDIKTRAPSYLSDFback to top mRNA from alignment at Contig_380:1573..4791+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_18865 ID=mRNA_18865|Name=jgi.p|Trimin1|354679|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3219bp|location=Sequence derived from alignment at Contig_380:1573..4791+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_380:1573..4791+ >mRNA_18865 ID=mRNA_18865|Name=jgi.p|Trimin1|354679|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1578bp|location=Sequence derived from alignment at Contig_380:1573..4791+ (Tribonema minus UTEX_B_3156 )back to top |