mRNA_9307 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|349182
Unique Name	mRNA_9307
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|349182 vs. uniprot
Match: A0A835YWZ7_9STRA (Myb-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWZ7_9STRA)

HSP 1 Score: 1137 bits (2941), Expect = 0.000e+0
Identity = 811/811 (100.00%), Postives = 811/811 (100.00%), Query Frame = 1

Query:    1 MASPQSTPAAAPRQWPHSCEQAQRHEQQQCALAAVHGGAADVAAALPCAGAAEQCDFAPPQQPVRAPLQAGADACLDAAXXXXXXXXXHAIAAAPSPLQAEQEQAWEAGATGGERGRGNTVDDRVLYPEGTAVRRQFVEGWFNGQREVEADDAADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSRPAAAAVGTREVVLRDWCITMSPLPRNDGSSSIRNLQNSGVAQPKYYIHGFADAGSSTSNESAAAVIDDTSGDDARSSNSRSSAPVKLQVEARIDQHTVATVGGARYGVRGAPSDAGAAARPPPHGALFAVRGGVPMQWRRAVARAYERAXXXXXXXXXXXXXXXXXXXGDRYGDVQLPTGTIAADKQASVSKVSRKRGAVATKAKNARSSTGLAALVAVKPEPQEVAAAGASPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDESGVKVTCTRSGRKRVPVLEWWRSQRLSVGPDSNGDEWTEQQEALLQQAQLRTDPGHANFWVQVAKGVPGKSAGQCSQRWFAQLEEHNDGAGGTSKGNQAGTKRKRGKSAAATPSAQDKPAASAAKTAQAASKGGKRGQTRAAAIASYLSSQAGHMDDVFQDSGGAQGKKKRKLSVPGVVSLPPNTLGATVPTPKAQGKTGKAGKSPANARQSQASGNVSKSYMVAVSKRMRKQPPPKAGAIMVKAKRPKAAKAVTTXTAAGAGYKLKGMVSSGGAKGPSDG 2433
            MASPQSTPAAAPRQWPHSCEQAQRHEQQQCALAAVHGGAADVAAALPCAGAAEQCDFAPPQQPVRAPLQAGADACLDAAXXXXXXXXXHAIAAAPSPLQAEQEQAWEAGATGGERGRGNTVDDRVLYPEGTAVRRQFVEGWFNGQREVEADDAADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSRPAAAAVGTREVVLRDWCITMSPLPRNDGSSSIRNLQNSGVAQPKYYIHGFADAGSSTSNESAAAVIDDTSGDDARSSNSRSSAPVKLQVEARIDQHTVATVGGARYGVRGAPSDAGAAARPPPHGALFAVRGGVPMQWRRAVARAYERAXXXXXXXXXXXXXXXXXXXGDRYGDVQLPTGTIAADKQASVSKVSRKRGAVATKAKNARSSTGLAALVAVKPEPQEVAAAGASPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDESGVKVTCTRSGRKRVPVLEWWRSQRLSVGPDSNGDEWTEQQEALLQQAQLRTDPGHANFWVQVAKGVPGKSAGQCSQRWFAQLEEHNDGAGGTSKGNQAGTKRKRGKSAAATPSAQDKPAASAAKTAQAASKGGKRGQTRAAAIASYLSSQAGHMDDVFQDSGGAQGKKKRKLSVPGVVSLPPNTLGATVPTPKAQGKTGKAGKSPANARQSQASGNVSKSYMVAVSKRMRKQPPPKAGAIMVKAKRPKAAKAVTTXTAAGAGYKLKGMVSSGGAKGPSDG
Sbjct:    1 MASPQSTPAAAPRQWPHSCEQAQRHEQQQCALAAVHGGAADVAAALPCAGAAEQCDFAPPQQPVRAPLQAGADACLDAAXXXXXXXXXHAIAAAPSPLQAEQEQAWEAGATGGERGRGNTVDDRVLYPEGTAVRRQFVEGWFNGQREVEADDAADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSRPAAAAVGTREVVLRDWCITMSPLPRNDGSSSIRNLQNSGVAQPKYYIHGFADAGSSTSNESAAAVIDDTSGDDARSSNSRSSAPVKLQVEARIDQHTVATVGGARYGVRGAPSDAGAAARPPPHGALFAVRGGVPMQWRRAVARAYERAXXXXXXXXXXXXXXXXXXXGDRYGDVQLPTGTIAADKQASVSKVSRKRGAVATKAKNARSSTGLAALVAVKPEPQEVAAAGASPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDESGVKVTCTRSGRKRVPVLEWWRSQRLSVGPDSNGDEWTEQQEALLQQAQLRTDPGHANFWVQVAKGVPGKSAGQCSQRWFAQLEEHNDGAGGTSKGNQAGTKRKRGKSAAATPSAQDKPAASAAKTAQAASKGGKRGQTRAAAIASYLSSQAGHMDDVFQDSGGAQGKKKRKLSVPGVVSLPPNTLGATVPTPKAQGKTGKAGKSPANARQSQASGNVSKSYMVAVSKRMRKQPPPKAGAIMVKAKRPKAAKAVTTXTAAGAGYKLKGMVSSGGAKGPSDG 811

[Close]

BLAST of jgi.p|Trimin1|349182 vs. uniprot
Match: D7G8K9_ECTSI (Myb-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8K9_ECTSI)

HSP 1 Score: 58.9 bits (141), Expect = 1.720e-5
Identity = 35/105 (33.33%), Postives = 47/105 (44.76%), Query Frame = 1

Query: 1624 RKRVPVLEWWRSQRLS----------------------------------VGPDSNGDE--WTEQQEALLQQAQLRTDPGHANFWVQVAKGVPGKSAGQCSQRWF 1830
            R   PVL+WWRSQRL+                                  VG D+NG+E  WT+ Q   L++AQ  T P  + FW  VA  V G++  +C Q+WF
Sbjct:   28 RGAAPVLDWWRSQRLTKTPSVGVVGAARFPLGQPSTGNHADMDSACRLKTVGRDANGEEEPWTKAQMHSLRRAQAETAPSTSAFWSAVACNVDGRNPQECQQKWF 132

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|349182 vs. uniprot

BLAST of jgi.p|Trimin1|349182 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A835YWZ7_9STRA	0.000e+0	100.00	Myb-like domain-containing protein n=1 Tax=Tribone...	[more]
D7G8K9_ECTSI	1.720e-5	33.33	Myb-like domain-containing protein n=1 Tax=Ectocar...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_38	contig	Contig_38:467264..476476 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|349182\|estExt_Genemark1.C_Ctg_380041
Max annot lvl	4776\|Peronosporales
EggNOG OGs	28U2F@1\|root,2R0T1@2759\|Eukaryota,3QCMF@4776\|Peronosporales
Evalue	6.86e-05
Seed ortholog	325452.fgenesh_scip_prom.46568.2438
Hectar predicted targeting category	other localisation
TranscriptId	349504
Track	FilteredModels1
ProteinId	349182

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|349182	gene_9307	Tribonema minus UTEX_B_3156	gene	Contig_38 467264..476476 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|349182	Trimin1\|349182\|estExt_Genemark1.C_Ctg_380041	Tribonema minus UTEX_B_3156	polypeptide	Contig_38 467264..476476 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_9307_1	exon_9307_1	Tribonema minus UTEX_B_3156	exon	Contig_38 467264..467698 +
exon_9307_2	exon_9307_2	Tribonema minus UTEX_B_3156	exon	Contig_38 468323..469019 +
exon_9307_3	exon_9307_3	Tribonema minus UTEX_B_3156	exon	Contig_38 469783..470340 +
exon_9307_4	exon_9307_4	Tribonema minus UTEX_B_3156	exon	Contig_38 471876..472123 +
exon_9307_5	exon_9307_5	Tribonema minus UTEX_B_3156	exon	Contig_38 472908..473039 +
exon_9307_6	exon_9307_6	Tribonema minus UTEX_B_3156	exon	Contig_38 474101..474259 +
exon_9307_7	exon_9307_7	Tribonema minus UTEX_B_3156	exon	Contig_38 474832..474907 +
exon_9307_8	exon_9307_8	Tribonema minus UTEX_B_3156	exon	Contig_38 475364..475473 +
exon_9307_9	exon_9307_9	Tribonema minus UTEX_B_3156	exon	Contig_38 476456..476476 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_9307	CDS_9307	Tribonema minus UTEX_B_3156	CDS	Contig_38 467264..467698 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_38:467264..476476+
coding sequence from alignment at Contig_38:467264..476476+

spliced messenger RNA

>mRNA_9307 ID=mRNA_9307|Name=jgi.p|Trimin1|349182|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2436bp|location=Sequence derived from alignment at Contig_38:467264..476476+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCTTCGCCGCAGAGCACGCCAGCGGCGGCGCCGAGACAATGGCCACA
CAGTTGCGAGCAGGCGCAGCGCCACGAGCAGCAGCAGTGTGCGCTTGCAG
CAGTACATGGCGGCGCTGCAGATGTGGCAGCAGCGCTGCCGTGCGCCGGC
GCCGCGGAGCAGTGCGATTTTGCGCCGCCGCAGCAGCCAGTGCGGGCGCC
GCTGCAGGCGGGAGCGGACGCGTGCCTTGACGCTGCTGCTGCAACGTCGG
CAGCGTCTGCGGCGCACGCGATCGCTGCCGCTCCATCACCATTACAGGCG
GAGCAGGAGCAGGCATGGGAAGCTGGGGCAACTGGTGGGGAGAGGGGCAG
GGGCAATACAGTGGATGACAGGGTGTTGTACCCGGAGGGGACTGCCGTGC
GCCGGCAATTTGTTGAGGGCTGGTTTAATGGCCAGCGCGAAGTTGAAGCC
GATGATGCTGCAGATGATACACAAGCCGCAGCGGCAGCAGCAGCGGCAGC
AGCAGCGGCAGCAGCGGCACTGGCGGCGCCAGCGACCGAACCACCGATGC
CAGCAGCAGCAGCAGCAGCAGCGCTGTCACGACCAGCAGCAGCTGCAGTT
GGCACACGCGAGGTTGTGCTCCGCGACTGGTGCATCACCATGTCTCCGCT
GCCGCGCAACGACGGCAGCAGCAGCATCCGCAACCTGCAGAACAGTGGCG
TAGCTCAGCCCAAGTACTACATCCACGGCTTTGCCGATGCGGGCAGCAGC
ACCAGCAACGAGAGCGCCGCTGCTGTCATCGACGATACTTCAGGAGATGA
CGCTCGCAGCAGCAACAGCAGGAGCAGCGCTCCAGTGAAACTGCAGGTGG
AGGCGCGGATCGACCAGCACACTGTCGCGACAGTCGGCGGCGCGCGCTAT
GGCGTGCGCGGCGCGCCTTCGGACGCGGGCGCCGCAGCGCGTCCACCGCC
CCACGGCGCGCTGTTTGCGGTGCGCGGAGGTGTGCCCATGCAGTGGCGGC
GCGCAGTGGCGCGCGCTTACGAGCGCGCTGCTGCCGCCGCCGCCGCTGAA
GTCGCGGCTTCAACTGAGGGACAGCAGGGGGGTGGTGGGGACCGCTATGG
CGATGTGCAGCTGCCGACGGGGACCATTGCTGCTGACAAACAGGCGTCAG
TGTCCAAGGTCTCGCGCAAACGCGGTGCCGTGGCCACCAAGGCAAAAAAT
GCGCGCAGCAGCACTGGCCTGGCAGCCCTAGTGGCAGTGAAACCGGAACC
GCAGGAGGTAGCGGCAGCAGGAGCGTCGCCAGCTGCGCCTTCAACTTCGC
GCAGCAGCGGCGCACGGAGAAAATCTGCAGCGAAAGCGGCAGCAGCAGCA
GCAGCAGCAGCGGCACCGGCTTCCCACTGCAGCGCTGCCTCCAGAAAAAC
TGCCGCGAAAGCACCCAAGTCACAGAAGCAGCGGCTTTCGGCAGCCGCTG
AGACCCCCATAGCCGCTAGCAAGAAGCCTTCAGAGAAGGGCAGCAGCCAT
GCAAAGGGGGGTGGCGGCAGCGCAGGACATGCCGCTGGTGCTGGCGGTGG
CGGCACCAACAGCGGCGGCGGCGGCGGTGGCGGCGATGAAAGCGGCGTGA
AGGTTACATGTACGCGCAGCGGCAGGAAGCGCGTGCCGGTGCTGGAGTGG
TGGCGCAGCCAACGGCTCAGCGTTGGCCCGGATAGCAACGGCGATGAATG
GACGGAGCAGCAGGAAGCGCTACTTCAACAGGCGCAGCTGCGCACCGACC
CGGGGCACGCCAACTTCTGGGTTCAAGTTGCAAAGGGCGTGCCCGGCAAG
AGCGCCGGCCAGTGCTCGCAGCGCTGGTTTGCGCAACTTGAAGAGCACAA
CGATGGAGCGGGCGGCACTAGCAAAGGCAATCAGGCGGGGACCAAGCGCA
AGAGGGGCAAAAGCGCCGCAGCAACGCCATCGGCACAGGACAAGCCGGCA
GCCTCCGCAGCGAAGACAGCGCAGGCGGCGTCAAAGGGCGGCAAGCGCGG
CCAGACACGCGCCGCCGCGATAGCGAGCTACCTGTCATCACAAGCGGGGC
ACATGGACGATGTGTTCCAGGATAGTGGCGGTGCGCAGGGAAAGAAGAAA
CGGAAGCTATCGGTTCCAGGCGTTGTGTCGCTGCCACCGAACACGTTGGG
CGCGACAGTACCAACCCCTAAAGCACAAGGCAAAACTGGCAAAGCCGGCA
AGAGCCCTGCCAATGCCCGGCAATCGCAGGCCAGCGGCAATGTGAGCAAG
AGCTACATGGTGGCAGTGTCCAAGCGCATGCGCAAGCAGCCACCGCCTAA
AGCAGGTGCCATCATGGTCAAAGCCAAACGCCCGAAAGCCGCAAAAGCCG
TCACGACCACCACTGCAGCCGGTGCAGGCTACAAACTCAAGGGCATGGTG
TCTAGTGGCGGTGCAAAGGGGCCCAGTGACGGGTGA

protein sequence of jgi.p|Trimin1|349182

>Trimin1|349182|estExt_Genemark1.C_Ctg_380041 ID=Trimin1|349182|estExt_Genemark1.C_Ctg_380041|Name=jgi.p|Trimin1|349182|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=812bp
MASPQSTPAAAPRQWPHSCEQAQRHEQQQCALAAVHGGAADVAAALPCAG
AAEQCDFAPPQQPVRAPLQAGADACLDAAAATSAASAAHAIAAAPSPLQA
EQEQAWEAGATGGERGRGNTVDDRVLYPEGTAVRRQFVEGWFNGQREVEA
DDAADDTQAAAAAAAAAAAAAAALAAPATEPPMPAAAAAAALSRPAAAAV
GTREVVLRDWCITMSPLPRNDGSSSIRNLQNSGVAQPKYYIHGFADAGSS
TSNESAAAVIDDTSGDDARSSNSRSSAPVKLQVEARIDQHTVATVGGARY
GVRGAPSDAGAAARPPPHGALFAVRGGVPMQWRRAVARAYERAAAAAAAE
VAASTEGQQGGGGDRYGDVQLPTGTIAADKQASVSKVSRKRGAVATKAKN
ARSSTGLAALVAVKPEPQEVAAAGASPAAPSTSRSSGARRKSAAKAAAAA
AAAAAPASHCSAASRKTAAKAPKSQKQRLSAAAETPIAASKKPSEKGSSH
AKGGGGSAGHAAGAGGGGTNSGGGGGGGDESGVKVTCTRSGRKRVPVLEW
WRSQRLSVGPDSNGDEWTEQQEALLQQAQLRTDPGHANFWVQVAKGVPGK
SAGQCSQRWFAQLEEHNDGAGGTSKGNQAGTKRKRGKSAAATPSAQDKPA
ASAAKTAQAASKGGKRGQTRAAAIASYLSSQAGHMDDVFQDSGGAQGKKK
RKLSVPGVVSLPPNTLGATVPTPKAQGKTGKAGKSPANARQSQASGNVSK
SYMVAVSKRMRKQPPPKAGAIMVKAKRPKAAKAVTTTTAAGAGYKLKGMV
SSGGAKGPSDG*

mRNA from alignment at Contig_38:467264..476476+

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_9307 ID=mRNA_9307|Name=jgi.p|Trimin1|349182|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=9213bp|location=Sequence derived from alignment at Contig_38:467264..476476+ (Tribonema minus UTEX_B_3156 )
ATGGCTTCGCCGCAGAGCACGCCAGCGGCGGCGCCGAGACAATGGCCACA
CAGTTGCGAGCAGGCGCAGCGCCACGAGCAGCAGCAGTGTGCGCTTGCAG
CAGTACATGGCGGCGCTGCAGATGTGGCAGCAGCGCTGCCGTGCGCCGGC
GCCGCGGAGCAGTGCGATTTTGCGCCGCCGCAGCAGCCAGTGCGGGCGCC
GCTGCAGGCGGGAGCGGACGCGTGCCTTGACGCTGCTGCTGCAACGTCGG
CAGCGTCTGCGGCGCACGCGATCGCTGCCGCTCCATCACCATTACAGGCG
GAGCAGGAGCAGGCATGGGAAGCTGGGGCAACTGGTGGGGAGAGGGGCAG
GGGCAATACAGTGGATGACAGGGTGTTGTACCCGGAGGGGACTGCCGTGC
GCCGGCAATTTGTTGAGGGCTGGTTTAATGGCCAGGTGCGTCGTGCATCC
GCTGCAGTTTGTGGCGCAGCGCAGGTGCTGTCGTGTGCACCATTGTGAGT
AGTTGTTGTTTGTCATAAAGAGCAGCGCGGGTTCATCACGCACTTGTGAT
AGAAGGCTGTCTAATCGTGTTGAATCTGGTGTAAAAATGTGGGAATTGGT
GATGTGTACGGTGAGGTGACTGCTGCGCATGCGGCAGGGCACTGCATTGA
GTCCGATGCAAACAGTGAGTCTGCAGGTGCCTTTGTGCTCCCTGTATGTG
TGCGCTGTCTGATCTCATCGAGAGAATGGCAGCATCAGGTATCACGCACA
AGCCGCCAGCAGCTGCATCACACGCACTCCAGCATGTTCAGCTGGTCTTA
AGGCGCCTGCACACAGTTGATGTGACTAGCTTGCTTGCTCTGATCGGAGA
TTTATGCTGTGTGTACTGAGCAGGTGGTGCTGCGCCATGCGGTAAACTCT
GAAAATAGCGCCAGCACCGCTCAGCAACAGCAGCAGCGAGTGCTGTGGCG
CGTTCTGTACACGGATGGAGACAGCGAGGACTTGCAGCTGGAGGACATGC
ATCAGATGGTAGCAAACTATGCCACTTGGTCAGCAGCAACACGATCGCCG
CTGTTGGAGCGCGAAGTTGAAGCCGATGATGCTGCAGATGATACACAAGC
CGCAGCGGCAGCAGCAGCGGCAGCAGCAGCGGCAGCAGCGGCACTGGCGG
CGCCAGCGACCGAACCACCGATGCCAGCAGCAGCAGCAGCAGCAGCGCTG
TCACGACCAGCAGCAGCTGCAGTTGGCACACGCGAGGTTGTGCTCCGCGA
CTGGTGCATCACCATGTCTCCGCTGCCGCGCAACGACGGCAGCAGCAGCA
TCCGCAACCTGCAGAACAGTGGCGTAGCTCAGCCCAAGTACTACATCCAC
GGCTTTGCCGATGCGGGCAGCAGCACCAGCAACGAGAGCGCCGCTGCTGT
CATCGACGATACTTCAGGAGATGACGCTCGCAGCAGCAACAGCAGGAGCA
GCGCTCCAGTGAAACTGCAGGTGGAGGCGCGGATCGACCAGCACACTGTC
GCGACAGTCGGCGGCGCGCGCTATGGCGTGCGCGGCGCGCCTTCGGACGC
GGGCGCCGCAGCGCGTCCACCGCCCCACGGCGCGCTGTTTGCGGTGCGCG
GAGGTGTGCCCATGCAGTGGCGGCGCGCAGTGGCGCGCGCTTACGAGCGC
GCTGCTGCCGCCGCCGCCGCTGAAGTCGCGGCTTCAACTGAGGGACAGCA
GGGGGGTGGTGGGGACCGCTATGGCGATGTGCAGCTGCCGACGGGGACCA
TTGCTGGTGGGTGTGTGGAATTTGTCTTCCTGGCAGCACTGGACTGTTGA
TGATCACTTGTATGGCGATTTGCTTTGCAAGGCAGTTGTGTGTGGCATGC
GCGCTCCGCCTCTCATCATGTGCGCTGCACATCGTTTCTGACGCTGCGTG
CCAGAATATGCACCTTCTTGGCTGTAAGCGGGCATCAGCTAACACGCGTG
TCACAAGGTTCAGAGTCAAGCTCAAGCTGTCATTTGGGAGAGCCTCAGAC
TCGCGTGCGTCCGCTTGCTCTGCGAGATCAGCACATTGACGTGTGTTGGC
GTCATGCAGCGTGTCTCAGCTACAATATTTATTAGAAGAACGGCAAGTAG
GTATTGCAGTAGCAGCGTTTTTGCAGAATGAGCTGGTCAGTTGTGTTCAG
GTACCTCAAGATACCTCCAAGTTCACTACTGCGGACCTTGACCAGTGATT
CCGACGTATATACACATTCGGCAGTATTTGTAAATTGCACCGCCACCATG
TACTCCGACACGACGCAACAAAAATTATGATTTGTCAATGAGCGCCTGAG
CTGTGTAACGCTGTTTCCTGCTCGTTGCAGGGCGATTGAGGAACAAGGCA
GGCAGCAGCACACCTGCTTCCACCAGCCAGGCCTCCAAGGCCGATGTACA
ATCTACAGTCTCCCGGAAAACTGGTGCCGTCGCCACACTGCCATCTGCTC
ATGGCAGCGCAACAAAGAAGAAACCTGCAGCAGGCAAAGCATCAGCGGCG
GCGCCCCCCTCTGCATCAGCTGACAAACAGGCGTCAGTGTCCAAGGTCTC
GCGCAAACGCGGTGCCGTGGCCACCAAGGCAAAAAATGCGCGCAGCAGCA
CTGGCCTGGCAGCCCTAGTGGCAGTGAAACCGGAACCGCAGGAGGTAGCG
GCAGCAGGAGCGTCGCCAGCTGCGCCTTCAACTTCGCGCAGCAGCGGCGC
ACGGAGAAAATCTGCAGCGAAAGCGGCAGCAGCAGCAGCAGCAGCAGCGG
CACCGGCTTCCCACTGCAGCGCTGCCTCCAGAAAAACTGCCGCGAAAGCA
CCCAAGTCACAGAAGCAGCGGCTTTCGGCAGCCGCTGAGACCCCCATAGC
CGCTAGCAAGAAGCCTTCAGAGAAGGGCAGCAGCCATGCAAAGGGGGGTG
GCGGCAGCGCAGGACATGCCGCTGGTGCTGGCGGTGGCGGCACCAACAGC
GGCGGCGGCGGCGGTGGCGGCGATGAAAGCGGCGTGAAGGTTACATGTAC
GCGCAGCGGCAGGAAGCGCGTGCCGGTGCTGGAGTGGTGGCGCAGCCAAC
GGCTCAGCGTTGGCCCGGATAGCAACGGTGAGGCCCCTGAGTTGAAGTTG
CTCACTCAAAGCTACTTGTCATGTATGGTGGATTTGGCTACATCAGGGGG
GTTGCGTCAAACCTCCTCACTTGTTGGCGACCAATATGCTCGTAGTTTGA
AGTATATACCTGACAGTGAGTTGCAGTGGCTGGCTACCATGCAATTACAG
CGATCAATGCCAGAACTCATTTTGTCGCTGTGTGAGGACCGAAGAGCTGC
TCAGCAGTGGCCTGGACAGTAGGTTTCAGATCAATCTGTGTCGTGCGTGT
CCAAGCCATCTCATGAATGGTGAGGTCAATTCAGGGCACAGCCTCGCATT
GTACAATTTAGTCTTGCGCAGGTCTGGAACAAGCAGCATTGAGGGTTTGC
GCCGCCTGTGTCTTGCGTCTGGTGATTATTGCCAGTAAATCAAGTGCTGC
ATACTGTATGAAGAGGTAGAGGTAACTACACTAGCCTTCTCAGCGCTCAC
TGCTTCAATGACGCATAGAGTGTTTATGTCATCCTGCGTGCAGCCTGCTC
GAAAGGAGTGGTGACTTTTCTCAATGTTTGTTAGTTTTTACATGCTGAAG
TGCATACTGGCATGTTGTGGCCAATTGCAAGCTGGGGTACCCTTGAATTA
TATTTTCAAGTTTCTTACTGTTACCTGCAACAGCAGCTTTGAGGTCTATT
CAGTATGTAAATGCGACTTGTACGCCCAGTGCATTTTCGCATGTCGGTCC
ACATTCAAACTGATAGCCCAGATGCGGTGTTTGAACTCACTTTACACATT
CAAGTTCAACTTGCTTGTTCTGGCCAACCTCCGCATACGGTTTGACGATG
CCTTGGTGCATCCATTGCTGTTGCGCGCTGTGCAGCGGAGCTGCTTTCAC
CGTCACCAATGAGGCCCAGCCTTGCTTCTGCAACTTCAACCGGCAAACGG
CGACGCTCCGCAGCTGCTCTAGCAGTCAAGCAAGAGCCCCAGGAGAGCAC
CAGCAAGCGCAGAAAAGGAGCAGCGGAAGGTGTTTTGAAGTGGCGGCCGC
GCATAATTTCAAAAGAAGTACTGCCAGCCTATTGCAGTGCAGATGCTGAC
ACCCCGCTGAATATATATACATTGACATATCGAAGTCAAACAGCAACGTG
CCTGAAATGTTGACTTGTTCTTGCTGCTGCAGTCAGCAGGCTTGCTGTCG
GTTGAGCCAGTAGCTTCAAGTGGACTGCAGGTAAATAGGCATACTTGACG
TCCAACTCATGTGATGCTGATCGTGAAAAGGAAGGTCTCGTCACGCAAAT
TCTCAAGTACATAAGCTGTTCATTGAAGCAACCATCTGAATTCAGCCCCA
CACACAGCCACCGTTGTGACACTGACGCATAAAACAATCATTGTGCCCCC
GACTTAGAGCGGCCGAAGTGCCAGCCCCAAACGTGAATTTCGGGTGAATA
CTGGTTATATTTTTGAACATCCTCCTTTCTAGACTAGACTCATTTCTTTT
CTAGACCAGATGGATTAACCCTTGGGCATGTGTAAGTTGGTTTGTCGATA
TTTGTGTCACAGGCGATGAATGGACGGAGCAGCAGGAAGCGCTACTTCAA
CAGGCGCAGCTGCGCACCGACCCGGGGCACGCCAACTTCTGGGTTCAAGT
TGCAAAGGGCGTGCCCGGCAAGAGCGCCGGCCAGTGCTCGCAGCGCTGGT
TTGCGCAACTTGAAGAGCACAACGATGGAGCGGGCGGCACTAGCAAAGGC
AATCAGGCGGGGACCAAGCGCAAGAGGGGCAAAAGCGCCGCAGCAACGCC
ATCGGCACAGGTACGTTGCCGCTTCTGCATGTCTGTGTGACGTAGGGCAC
TGAAGTGCTTGGTGACCTGCAACATCATGAAGAAATGGTGGTTGTGCCGC
ACTGCATTGACTGCAGCGCTAGTGACGCAAGTTGTCTCAAGTATCTCGAG
TACATGAACACATGTCAATGTTTGTATCACAAGCTGTCCCGTCTGCACCG
GCGCTGGGATGCGCTGGTGTGATAATGAAAGGCAAATGCAAGTCGAATTG
CTTGCTTGTACCTGATTCATAAAACCACCAGAGAGACCTCAAGTTTTTTG
GGTTAGAAGCATTTCCAGTTGCTGGTGCCAGGGGCTTGATGCCCTGGTGA
CGAAGGCTTGAAGCAGAAGTAGCGATGATACTGTTTTCAGGGACAATTGT
GGTTCATGACAATGAGCAGTATCTTGTGCGGCACCACGGCAGCGTCCGTA
CATCTGGTGCACGCATATGAGCGTGATGGCTGTTCAGTACCATGCAATAC
GTGGTCAAACGCGGCGCATGAACATCTGCAAGTTGAAGTTTTGAATCAAA
TCCCACTGTGATGCCAAGCGCAGGATGTGCAATCAGAGAGGCGCTAACAC
CATGGCTGTACACACACTGGCACATGACACTCACTCTGTAAGTACTGCAG
AGGCTGTGCCATGAGGTATTGCCGATAATGCAGCAGCAAGAGTTGAAGTA
GGCACTTGCACTATTACGTCATGATGGAAGGACGTCATGCGGCATCAGAC
CAGCACTGACAGGGTTGCCACTGGCACTATCATGGCTCAAACAGGACAAG
CCGGCAGCCTCCGCAGCGAAGACAGCGCAGGCGGCGTCAAAGGGCGGCAA
GCGCGGCCAGACACGCGCCGCCGCGATAGCGAGCTACCTGTCATCACAAG
CGGGGCACATGGACGATGTGTTCCAGGTGCTTCATAAGCATGTAGTTGCA
TGTTATCTGCACATGTGTTGTCTTGGCAATGCATGTGCGCGCATGTCTGA
AGCCCTTGTTTCAGAGTGTTGCATGCGTAAAGCGTGGTCAGGCATGTACA
GACGCGACACCGAGCTATCAACTCTTCCCGGAAGCACCTTCAATATGTTA
CAGCAGCGCGGCACGTAGACAGAGTGCTGTACCTCAGATGCCTTTCGAAC
GTGCAGTGACTTACATGCACAACAACAGTTGTGAGGTATGCCTTCGCTTT
TGTGTTGTGCAGCAACTTATACTGACTGCTTAGCAGGGCCTGCAAGCAAA
GTGGTTTAGGTCGCTACCAAACCCCAAGTCTTGGGTGCCAACGCCTACCA
ACCTGCATCTTAGGCATGGATGGAATGCAGCACTTATGTTTTTGCTGCCT
TTCATAGCATGCATGAGTCCTCTGGCAGCCAGAGTAGCATTCAGATGGTG
ATCATTAGACATTAATGGCCCCTTATATTCAGCAATACCATGCCACATTC
GTTCAGCGCTCAAAAGTGTGGCATGGCCGCTTTAAAAAGTGATCCGACAC
TTGTTGTCATGACGGCCAAAGACGGACGGTGGACAAACAATGGGCATCAA
GGTCAAAACAACTTCAAAATCCTTACAGCACTGTCATTTGCTGCACAAGC
AGCCTCGTTGTCGTGCAGAACGCACAAGCATGTCTCAGCAGTCAACAAAT
TGGTGCAGTTGATGGCGCCGTTGTACTGCAAGCAGACCTGTCATGCCTCC
CTACACCCGCGCCTTGACCTATGCGCGTCACCTGCTGTACTGCGCTCTGG
TGATTCCCGCACTTTAACATCGTGGGTTCATGCGCTTTGACTGCCTGTTT
GCCCGGTGAAAGCCTGTGGTCTTGTCCCTGCTTCCACAAAAAGAGCAACA
ACGGGCACTTGAAGTTGCCGCAGCAAATATTATCACTTCCCATCTGCTGC
CTTGCCTGGTAATATCTGTACTAGACTATCGTACTGATTTACTTGCTTTG
GTGTCGCCTGTGATGCATGTGACACCACTGCCTGCAGGATAGTGGCGGTG
CGCAGGGAAAGAAGAAACGGAAGCTATCGGTTCCAGGCGTTGTGTCGCTG
CCACCGAACACGTTGGGCGCGACAGTACCAACCCCTAAAGCACAAGGCAA
AACTGGCAAAGCCGGCAAGAGCCCTGCCAATGCCCGGCAATCGCAGGTAT
GGAGGGATAACCGAGTCGTTACATAGAGCCCTAGTGTCACCCCTCGCCTT
GCAGACAGGTTTTGAATTACTGCACCCTAGGAGGCAGGGCCTGCTGGGGT
TATCATGCATGATAGCCATGCTTGTGTGATTGATAAGGCTGTGCTGTACC
GCCTGCACATTGCTGCTCACCTTTCCTCAACATCTCTGCATCCTGCAAAC
GGCACAGGGTGCGTAAAGATCAATTCTGCTGTTACTCTACTTGCTCGTAT
GTCGCTGTTCAAATTGACGACTGTTGTTGACCGTTGTCAAGCTCCAAGAA
CTCCATCATTAACTTAAGGACCTTAAGTGCTTGGTGAGTACTCAGCACTC
CACTCTACTGGAACTCCAATGTCACCACTACCCTCTTTTAGGAAGTGGAC
TTCAAAAATCACGAGAGTATTGCGGCTGGAATTCCCCTCAGTTGGGACCA
TCCTGCCTCCACTGAATGTGCGTCGACAGCTCTGAATATGCTTTGCGCAA
AAGCTTGCTGCACCATCGTGGTAGAGCTGTGAGCTCACTACCTCTGCTGA
ATGCTGCTGCTGCTATAGGCCAGCGGCAATGTGAGCAAGAGCTACATGGT
GGCAGTGTCCAAGCGCATGCGCAAGCAGCCACCGCCTAAAGCAGGTGATT
TTGCACTTTATTTGTGCACTCAATATTCTACTTTGCGCACTGCATGCCAC
TGACGCGGTCTCAATGTTTTTGTTACAATGCGCAATGTGCTCAGCTGCTC
ATGCTGGATATGGCTTTGCCCTTCCTTCGCATCACCATTTCTGGTCGTTC
TGTGCCCCCATGCCATCATCCATTCCATTTGGGTCATACCATTCTGAACA
GCAGCAGACTGGCGTCTGCACCAAAGCTAGGGCTGCACAGCTGTAGGACT
CGAGTGCAAGCACGTAGTTGTGATCCAAATGAACACTGAGGTGTGGCTGA
TTGAGTAGCATTCCTCTGCATTTGTTGCTGAGCTTCTCCGCTACGAAATT
GCTGTTGCTTGTCAGGTGGGCTTGTACCGCCTGTGCTGCCGCTGTGAGCA
CCTTGCACTACTCTAATCTTATGATTACAAACTGGGCCTGGCTGCTGCAG
GTGCCATCATGGTCAAAGCCAAACGCCCGAAAGCCGCAAAAGCCGTCACG
ACCACCACTGCAGCCGGTGCAGGCTACAAACTCAAGGGCATGGTGTCTAG
TGGCGGTGCAGTGAGGCTTGAAGAACAAGCTGCGAGCAGCAGTGAATATG
ACGGCTTTGCAAATGAGTCTGGCTCTGAGTCTGACACAGAATGAAACTAC
TCTCATGTACCTCTATTATATTCCACTTGTGGCTGTGGAAATGCCATGCT
GTGTACTTCCAGCATACTGCTATAAAACTTGCTGTATCTGTGTGCTGGTG
CAGGGGTTAGTGCCATGCACGTGCGTCTGCACACATGCGCCTGCCACAAT
GTGCTTACGACAGCAAAAACAAGTCATACATGCATGTCGGCAATCTTGAG
GAAAAGTGTCATAAATAAATGTTATGGTGTCAATCTCCATCGGTAACATT
GAATCTCACATGACGATACATTATTCATGGCAAAAGTCCACACCGACAGG
AATTGAACCTGTTTCTCCAGGCTATTGCCTGGTGTGCTTCCATTGCACCA
CGGTGTGCGGTGGGTGCTGACAATCAATGCACATTCATGCTTTGACGCAA
GCAATGGCACACATACACATACGTAGAGACAGAGCTTCCGCATGCATCAA
TTCATCAAGTATCATAATGGTACATGTAATTTTACGTCACATCAGTGTAT
GCAACTTCAAGCATTGCGTGATGTGTCCAGCCAAGGTCTCTCTTGGTGGT
AGTGAACCGACAAGGGCCAGCACCAGGCCCCCGCACCACGACAAGGTGGA
GACTTTATTTGCGGGGGCGAACCTAGGTACACCAGAATATACAAAGAACG
CACGATGAGCAGCAGACAAGCACACAGTGACGGGAAGCGCAGGATCACAT
GCCCGCAGCAGATGGAGGCTGCAAGGTGGCCCGAATCAGATATGCGTTTC
TAGAAAAGCCACGACACTTGCATAGGTGGTGCACTCAACTACATTGGTGC
TTGACAAGCTGCATCCAGACAAGCGCATGCTGCTGAACACAGGCACGGCC
CGGAAAGAGCGAGGAAGGCAATCCCTCCCCTCTTTCCTGAAGAAGGGGCC
CAGTGACGGGTGA

Coding sequence (CDS) from alignment at Contig_38:467264..476476+

>mRNA_9307 ID=mRNA_9307|Name=jgi.p|Trimin1|349182|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2436bp|location=Sequence derived from alignment at Contig_38:467264..476476+ (Tribonema minus UTEX_B_3156 )
ATGGCTTCGCCGCAGAGCACGCCAGCGGCGGCGCCGAGACAATGGCCACA
CAGTTGCGAGCAGGCGCAGCGCCACGAGCAGCAGCAGTGTGCGCTTGCAG
CAGTACATGGCGGCGCTGCAGATGTGGCAGCAGCGCTGCCGTGCGCCGGC
GCCGCGGAGCAGTGCGATTTTGCGCCGCCGCAGCAGCCAGTGCGGGCGCC
GCTGCAGGCGGGAGCGGACGCGTGCCTTGACGCTGCTGCTGCAACGTCGG
CAGCGTCTGCGGCGCACGCGATCGCTGCCGCTCCATCACCATTACAGGCG
GAGCAGGAGCAGGCATGGGAAGCTGGGGCAACTGGTGGGGAGAGGGGCAG
GGGCAATACAGTGGATGACAGGGTGTTGTACCCGGAGGGGACTGCCGTGC
GCCGGCAATTTGTTGAGGGCTGGTTTAATGGCCAGCGCGAAGTTGAAGCC
GATGATGCTGCAGATGATACACAAGCCGCAGCGGCAGCAGCAGCGGCAGC
AGCAGCGGCAGCAGCGGCACTGGCGGCGCCAGCGACCGAACCACCGATGC
CAGCAGCAGCAGCAGCAGCAGCGCTGTCACGACCAGCAGCAGCTGCAGTT
GGCACACGCGAGGTTGTGCTCCGCGACTGGTGCATCACCATGTCTCCGCT
GCCGCGCAACGACGGCAGCAGCAGCATCCGCAACCTGCAGAACAGTGGCG
TAGCTCAGCCCAAGTACTACATCCACGGCTTTGCCGATGCGGGCAGCAGC
ACCAGCAACGAGAGCGCCGCTGCTGTCATCGACGATACTTCAGGAGATGA
CGCTCGCAGCAGCAACAGCAGGAGCAGCGCTCCAGTGAAACTGCAGGTGG
AGGCGCGGATCGACCAGCACACTGTCGCGACAGTCGGCGGCGCGCGCTAT
GGCGTGCGCGGCGCGCCTTCGGACGCGGGCGCCGCAGCGCGTCCACCGCC
CCACGGCGCGCTGTTTGCGGTGCGCGGAGGTGTGCCCATGCAGTGGCGGC
GCGCAGTGGCGCGCGCTTACGAGCGCGCTGCTGCCGCCGCCGCCGCTGAA
GTCGCGGCTTCAACTGAGGGACAGCAGGGGGGTGGTGGGGACCGCTATGG
CGATGTGCAGCTGCCGACGGGGACCATTGCTGCTGACAAACAGGCGTCAG
TGTCCAAGGTCTCGCGCAAACGCGGTGCCGTGGCCACCAAGGCAAAAAAT
GCGCGCAGCAGCACTGGCCTGGCAGCCCTAGTGGCAGTGAAACCGGAACC
GCAGGAGGTAGCGGCAGCAGGAGCGTCGCCAGCTGCGCCTTCAACTTCGC
GCAGCAGCGGCGCACGGAGAAAATCTGCAGCGAAAGCGGCAGCAGCAGCA
GCAGCAGCAGCGGCACCGGCTTCCCACTGCAGCGCTGCCTCCAGAAAAAC
TGCCGCGAAAGCACCCAAGTCACAGAAGCAGCGGCTTTCGGCAGCCGCTG
AGACCCCCATAGCCGCTAGCAAGAAGCCTTCAGAGAAGGGCAGCAGCCAT
GCAAAGGGGGGTGGCGGCAGCGCAGGACATGCCGCTGGTGCTGGCGGTGG
CGGCACCAACAGCGGCGGCGGCGGCGGTGGCGGCGATGAAAGCGGCGTGA
AGGTTACATGTACGCGCAGCGGCAGGAAGCGCGTGCCGGTGCTGGAGTGG
TGGCGCAGCCAACGGCTCAGCGTTGGCCCGGATAGCAACGGCGATGAATG
GACGGAGCAGCAGGAAGCGCTACTTCAACAGGCGCAGCTGCGCACCGACC
CGGGGCACGCCAACTTCTGGGTTCAAGTTGCAAAGGGCGTGCCCGGCAAG
AGCGCCGGCCAGTGCTCGCAGCGCTGGTTTGCGCAACTTGAAGAGCACAA
CGATGGAGCGGGCGGCACTAGCAAAGGCAATCAGGCGGGGACCAAGCGCA
AGAGGGGCAAAAGCGCCGCAGCAACGCCATCGGCACAGGACAAGCCGGCA
GCCTCCGCAGCGAAGACAGCGCAGGCGGCGTCAAAGGGCGGCAAGCGCGG
CCAGACACGCGCCGCCGCGATAGCGAGCTACCTGTCATCACAAGCGGGGC
ACATGGACGATGTGTTCCAGGATAGTGGCGGTGCGCAGGGAAAGAAGAAA
CGGAAGCTATCGGTTCCAGGCGTTGTGTCGCTGCCACCGAACACGTTGGG
CGCGACAGTACCAACCCCTAAAGCACAAGGCAAAACTGGCAAAGCCGGCA
AGAGCCCTGCCAATGCCCGGCAATCGCAGGCCAGCGGCAATGTGAGCAAG
AGCTACATGGTGGCAGTGTCCAAGCGCATGCGCAAGCAGCCACCGCCTAA
AGCAGGTGCCATCATGGTCAAAGCCAAACGCCCGAAAGCCGCAAAAGCCG
TCACGACCACCACTGCAGCCGGTGCAGGCTACAAACTCAAGGGCATGGTG
TCTAGTGGCGGTGCAAAGGGGCCCAGTGACGGGTGA