Trimin1|165559|e_gw1.38.56.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|165559
Unique NameTrimin1|165559|e_gw1.38.56.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length145
Homology
BLAST of jgi.p|Trimin1|165559 vs. uniprot
Match: A0A835YVS6_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVS6_9STRA)

HSP 1 Score: 293 bits (751), Expect = 1.110e-100
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0
Query:    1 MSAASPAFRDQYAEQPTATKVKTITGEMQFLEAMAANGDKPVVLKFYDTFCRACKAVAPKFERMAQENPGVAFYQVEFRQDKPLCKSLGITMLPTIQIYQGSAGKIADMPVGPKRFHVAEATLAEVLNQNSNGHGATGSIHIPN 144
            MSAASPAFRDQYAEQPTATKVKTITGEMQFLEAMAANGDKPVVLKFYDTFCRACKAVAPKFERMAQENPGVAFYQVEFRQDKPLCKSLGITMLPTIQIYQGSAGKIADMPVGPKRFHVAEATLAEVLNQNSNGHGATGSIHIPN
Sbjct:    1 MSAASPAFRDQYAEQPTATKVKTITGEMQFLEAMAANGDKPVVLKFYDTFCRACKAVAPKFERMAQENPGVAFYQVEFRQDKPLCKSLGITMLPTIQIYQGSAGKIADMPVGPKRFHVAEATLAEVLNQNSNGHGATGSIHIPN 144          
BLAST of jgi.p|Trimin1|165559 vs. uniprot
Match: A0A835YYQ5_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYQ5_9STRA)

HSP 1 Score: 191 bits (484), Expect = 2.330e-59
Identity = 95/134 (70.90%), Postives = 109/134 (81.34%), Query Frame = 0
Query:   11 QYAEQPTATKVKTI-TGEMQFLEAMAANGDKPVVLKFYDTFCRACKAVAPKFERMAQENPGVAFYQVEFRQDKPLCKSLGITMLPTIQIYQGSAGKIADMPVGPKRFHVAEATLAEVLNQNSNGHGATGSIHIP 143
            Q  EQ    KVK I  G   FLEAMA+N D+PVV+KFYDTFCRACKA+APKFERMAQENPGV+FY+VEFR++KPLCKSLGITMLPTIQIY+G+AGK+A MPVGPKRFH+AE  LA VL Q  N    + +IHIP
Sbjct:   57 QRQEQSENRKVKLIENGTDGFLEAMASNADRPVVIKFYDTFCRACKAIAPKFERMAQENPGVSFYEVEFRENKPLCKSLGITMLPTIQIYRGAAGKVASMPVGPKRFHLAEEALASVLAQEGN----SAAIHIP 186          
BLAST of jgi.p|Trimin1|165559 vs. uniprot
Match: A0A6H5K275_9PHAE (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K275_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 1.140e-26
Identity = 54/129 (41.86%), Postives = 77/129 (59.69%), Query Frame = 0
Query:   13 AEQPTATK-------VKTITGEMQFLEAMAANGDKPVVLKFYDTFCRACKAVAPKFERMAQENP--GVAFYQVEFRQDKPLCKSLGITMLPTIQIYQGSAGKIADMPVGPKRFHVAEATLAEVLNQNSN 132
            A +PTA +       V+ I     ++ AMA + DK VV+KFYD FCRAC  + P++E +++  P     F+ VEF   K LCK LGI  LPT+QIY G+ G++AD+P GP RF   E  +A V++   +
Sbjct:   64 AARPTAAQEPERRPNVQAIDSNDDYVSAMAQHEDKLVVIKFYDQFCRACDEIRPRYEDLSRSQPEEDAVFFDVEFSGAKDLCKQLGIMRLPTVQIYDGTNGRVADLPAGPSRFTDVEEKIAAVISSKKS 192          
BLAST of jgi.p|Trimin1|165559 vs. uniprot
Match: A0A7S4A7N2_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A7N2_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 1.400e-20
Identity = 51/129 (39.53%), Postives = 74/129 (57.36%), Query Frame = 0
Query:    4 ASPAFRDQYAEQPTATKVKTITGEMQFLEAMAAN-GDKPVVLKFYDTFCRACKAVAPKFERMAQE-NPGVAFYQVEFRQDKPLCKSLGITMLPTIQIYQGSAGKIADMPVGPKRFHVAEATLAEVLNQN 130
            A P  R Q +  P       I  E  FL AM+ + GDK V +KFY  +CRACK +AP+FER+A+E     AFY++EF  +K LC+ L I  LP +Q ++G+ G +A +  GP +F      L ++L  +
Sbjct:  101 AKPLARKQSSHVPA------IVDEDTFLAAMSKSAGDKVVAIKFYAGWCRACKTIAPRFERLAKEFGEEAAFYEIEFSANKDLCRRLDIKKLPCVQFFRGAEGHVATVMCGPSKFPDVRLKLEDLLGHS 223          
BLAST of jgi.p|Trimin1|165559 vs. uniprot
Match: A0A7S3ATR9_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ATR9_9EUKA)

HSP 1 Score: 87.8 bits (216), Expect = 6.410e-19
Identity = 46/109 (42.20%), Postives = 66/109 (60.55%), Query Frame = 0
Query:   35 AANGDKPVVLKFYDTFCRACKAVAPKFERMAQENPGVAFYQVEFRQDKPLCKSLGITMLPTIQIYQGSAGKIADMPVGPKRFHVAEATLAEVLNQNSNGHGATGSIHIP 143
            A   ++ VV+KF+ ++CRACKA++PKF R+A + P V F+++ F  +K LCKSLGI +LP I+I  GS GK+     GP +     + L E L Q    HG   S  +P
Sbjct:   71 ATRENRVVVIKFFASWCRACKAMSPKFTRIADDWPDVEFHEIMFDNNKKLCKSLGIKILPYIEIIGGSGGKVEGFTCGPSKI----SRLQEKLEQ----HGLPPSEELP 171          
BLAST of jgi.p|Trimin1|165559 vs. uniprot
Match: A0A7J9CGA3_GOSGO (Thioredoxin domain-containing protein n=4 Tax=Gossypium TaxID=3633 RepID=A0A7J9CGA3_GOSGO)

HSP 1 Score: 85.1 bits (209), Expect = 2.540e-18
Identity = 37/93 (39.78%), Postives = 59/93 (63.44%), Query Frame = 0
Query:   24 ITGEMQFLEAMAANGDKPVVLKFYDTFCRACKAVAPKFERMAQENPGVAFYQVEFRQDKPLCKSLGITMLPTIQIYQGSAGKIADMPVGPKRF 116
            I    +FL A++  GD+ V+++FY T+C +CKA+ PK  R AQENP + F +V F ++KP+CKSL + +LP    Y+G+ G++        +F
Sbjct:    4 IHSTQEFLSALSEAGDRLVIVEFYGTWCASCKALFPKLCRTAQENPEILFLKVNFDENKPMCKSLNVKVLPYFHFYRGAHGQLESFSCSLAKF 96          
BLAST of jgi.p|Trimin1|165559 vs. uniprot
Match: F0YB20_AURAN (Thioredoxin domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YB20_AURAN)

HSP 1 Score: 83.2 bits (204), Expect = 4.280e-18
Identity = 42/98 (42.86%), Postives = 63/98 (64.29%), Query Frame = 0
Query:   21 VKTITGEMQFLEAMA-ANGDKPVVLKFYDTFCRACKAVAPKFERMAQENPG--VAFYQVEFRQDKPLCKSLGITMLPTIQIYQGSAGKIADMPVGPKR 115
            V  I G+  FL AM     D+ V +KFY ++CRACK++AP+FER+A+E  G  V F+++EF  +K LC+ L I  LP +Q ++GS G +  +  GP +
Sbjct:    1 VVPIDGDEAFLAAMQYCTDDRLVAVKFYASWCRACKSIAPRFERLAKEFAGDEVQFFEIEFAANKELCRRLNIKKLPCVQYFRGSLGCVDTVMCGPSK 98          
BLAST of jgi.p|Trimin1|165559 vs. uniprot
Match: A0A7S0CN45_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0CN45_MICPS)

HSP 1 Score: 86.3 bits (212), Expect = 9.960e-18
Identity = 44/127 (34.65%), Postives = 65/127 (51.18%), Query Frame = 0
Query:    9 RDQYAEQPTATKVKTITGEMQFLEAMAANGDKPVVLKFYDTFCRACKAVAPKFERMAQENPGVAFYQVEFRQDKPLCKSLGITMLPTIQIYQGSAGKIADMPVGPKRFHVAEATLAEVLNQNSNGHG 135
            +D + E+     VK   G   FL  +   GD  VV+ FY  +C AC+A+ PK  ++A ENP   F +VEF  +K +C+S+G+ +LP   +Y+G  GK+A       + H     LAE       G G
Sbjct:  116 KDAWWEKEAPENVKDCDGMDAFLGELQRAGDALVVVDFYARWCGACRALYPKLCKLAAENPDAVFLKVEFDDNKDMCRSMGVKVLPFFHMYRGKDGKVASFSASVSKVHRLRDALAEHGGDAGRGAG 242          
BLAST of jgi.p|Trimin1|165559 vs. uniprot
Match: A0A067KPT7_JATCU (Thioredoxin domain-containing protein n=2 Tax=Jatropha curcas TaxID=180498 RepID=A0A067KPT7_JATCU)

HSP 1 Score: 85.5 bits (210), Expect = 1.340e-17
Identity = 36/101 (35.64%), Postives = 63/101 (62.38%), Query Frame = 0
Query:   24 ITGEMQFLEAMAANGDKPVVLKFYDTFCRACKAVAPKFERMAQENPGVAFYQVEFRQDKPLCKSLGITMLPTIQIYQGSAGKIADMPVGPKRFHVAEATLA 124
            I    +FL A++ +GD+ V+++FY T+C +C+A+ PK  R A+ENP + F +V F ++KP+CKSL + +LP    Y+G+ G++        +F   +  +A
Sbjct:   96 IHSTQEFLSALSQSGDRLVIVEFYGTWCASCRALFPKLCRTAEENPDILFLKVNFDENKPMCKSLNVKVLPYFHFYRGAHGQLESFSCSLAKFQKIKDAIA 196          
BLAST of jgi.p|Trimin1|165559 vs. uniprot
Match: A0A2G5DWJ1_AQUCA (Thioredoxin domain-containing protein n=2 Tax=Thalictroideae TaxID=1463137 RepID=A0A2G5DWJ1_AQUCA)

HSP 1 Score: 85.1 bits (209), Expect = 1.810e-17
Identity = 37/102 (36.27%), Postives = 64/102 (62.75%), Query Frame = 0
Query:   24 ITGEMQFLEAMAANGDKPVVLKFYDTFCRACKAVAPKFERMAQENPGVAFYQVEFRQDKPLCKSLGITMLPTIQIYQGSAGKIADMPVGPKRFHVAEATLAE 125
            I    +FL+A++  G+K V+++FY T+C +C+A+ PK  + AQENP + F +V F ++KP+CKSL + +LP    Y+GS G++        +F   +  +A+
Sbjct:   97 IHSTQEFLDALSQAGEKLVIVEFYGTWCGSCRALFPKLCKTAQENPDIIFLKVNFDENKPMCKSLNVKVLPYFHFYRGSDGQLESFSCSLAKFQKIKDGIAK 198          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|165559 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YVS6_9STRA1.110e-100100.00Thioredoxin-like protein n=1 Tax=Tribonema minus T... [more]
A0A835YYQ5_9STRA2.330e-5970.90Thioredoxin-like protein n=1 Tax=Tribonema minus T... [more]
A0A6H5K275_9PHAE1.140e-2641.86Thioredoxin domain-containing protein n=2 Tax=Ecto... [more]
A0A7S4A7N2_9STRA1.400e-2039.53Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S3ATR9_9EUKA6.410e-1942.20Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7J9CGA3_GOSGO2.540e-1839.78Thioredoxin domain-containing protein n=4 Tax=Goss... [more]
F0YB20_AURAN4.280e-1842.86Thioredoxin domain-containing protein (Fragment) n... [more]
A0A7S0CN45_MICPS9.960e-1834.65Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
A0A067KPT7_JATCU1.340e-1735.64Thioredoxin domain-containing protein n=2 Tax=Jatr... [more]
A0A2G5DWJ1_AQUCA1.810e-1736.27Thioredoxin domain-containing protein n=2 Tax=Thal... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 10..134
e-value: 1.3E-21
score: 78.6
NoneNo IPR availablePIRSRPIRSR000077-4PIRSR000077-4coord: 29..129
e-value: 2.1E-8
score: 32.0
NoneNo IPR availablePIRSRPIRSR037293-1PIRSR037293-1coord: 33..105
e-value: 7.4E-9
score: 32.1
NoneNo IPR availablePANTHERPTHR43601:SF10THIOREDOXIN-LIKE 2-2, CHLOROPLASTICcoord: 18..126
NoneNo IPR availablePANTHERPTHR43601THIOREDOXIN, MITOCHONDRIALcoord: 18..126
NoneNo IPR availableCDDcd02947TRX_familycoord: 29..113
e-value: 2.808E-17
score: 69.8945
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 29..105
e-value: 4.3E-15
score: 55.6
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 9..128
score: 11.429628
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 12..129

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_38contigContig_38:224430..225742 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|165559mRNA_9282Tribonema minus UTEX_B_3156 mRNAContig_38 224430..225742 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|165559|e_gw1.38.56.1 ID=Trimin1|165559|e_gw1.38.56.1|Name=jgi.p|Trimin1|165559|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=145bp
MSAASPAFRDQYAEQPTATKVKTITGEMQFLEAMAANGDKPVVLKFYDTF
CRACKAVAPKFERMAQENPGVAFYQVEFRQDKPLCKSLGITMLPTIQIYQ
GSAGKIADMPVGPKRFHVAEATLAEVLNQNSNGHGATGSIHIPN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR036249Thioredoxin-like_sf