Trimin1|165506|e_gw1.38.43.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|165506
Unique NameTrimin1|165506|e_gw1.38.43.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length174
Homology
BLAST of jgi.p|Trimin1|165506 vs. uniprot
Match: A0A835Z872_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=4 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z872_9STRA)

HSP 1 Score: 305 bits (780), Expect = 1.050e-103
Identity = 159/174 (91.38%), Postives = 162/174 (93.10%), Query Frame = 0
Query:    1 MGDPGPDAVKVADLCAGIGGFSRAVQMAGGRVVYAMDHNAAAKPVYDANRGVSAELSTRDLYTSEMWEQLAASGAGMVVTGPPCTDFAPARLVRADKGERREGTRAALTPLLVHQLTQMQMPLVVQENVVSIESMTRGQVAFALARERGYHLFFLRLNASDFGPAYQRRRLFVV 174
            MGDPGPDAVKV DLCAGIGGFSRAVQMAGGRVVYAMD NAAAKPVYDANRGV AELSTRDLYTSEMWE+LAASGAGMVVTGPPCT+   ARLVRADKGERREG RAALTPLLVHQLTQMQMPLVV ENVVSIESMTRGQ AFALARERGYH+ FLRL ASDFGP YQRRRLFVV
Sbjct:    1 MGDPGPDAVKVTDLCAGIGGFSRAVQMAGGRVVYAMDRNAAAKPVYDANRGVGAELSTRDLYTSEMWEELAASGAGMVVTGPPCTESTSARLVRADKGERREG-RAALTPLLVHQLTQMQMPLVVLENVVSIESMTRGQEAFALARERGYHICFLRLYASDFGPPYQRRRLFVV 173          
BLAST of jgi.p|Trimin1|165506 vs. uniprot
Match: A0A835YZ35_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ35_9STRA)

HSP 1 Score: 141 bits (355), Expect = 1.220e-35
Identity = 79/172 (45.93%), Postives = 95/172 (55.23%), Query Frame = 0
Query:    3 DPGPDAVKVADLCAGIGGFSRAVQMAGGRVVYAMDHNAAAKPVYDANRGVSAELSTRDLYTSEMWEQLAASGAGMVVTGPPCTDFAPARLVRADKGERREGTRAALTPLLVHQLTQMQMPLVVQENVVSIESMTRGQVAFALARERGYHLFFLRLNASDFGPAYQRRRLFVV 174
            DPGPDA KVADLCAG+GGFSRAVQ+AGGRVVYAMD+NA+ KP+YDANRG  AEL+  DLY  + W  L +SGAG+ V G PC D++ AR V A+KG                                                   YH+ FLR+ ASD GP Y++ RL  V
Sbjct:  440 DPGPDAPKVADLCAGLGGFSRAVQLAGGRVVYAMDNNASVKPLYDANRGAGAELTISDLYLPDTWTALVSSGAGVAVAGTPCRDWSSARHVDANKG---------------------------------------------------YHVSFLRMRASDHGPPYKKHRLIAV 560          
BLAST of jgi.p|Trimin1|165506 vs. uniprot
Match: UPI000EFA37C4 (DNA (cytosine-5-)-methyltransferase n=1 Tax=Brucella intermedia TaxID=94625 RepID=UPI000EFA37C4)

HSP 1 Score: 63.9 bits (154), Expect = 8.670e-9
Identity = 55/167 (32.93%), Postives = 79/167 (47.31%), Query Frame = 0
Query:    9 VKVADLCAGIGGFSRAVQMAGGRVVYAMDHNAAAKPVYDANRGVSA-ELSTRDLYTSEMWEQLAASGAGMVVTGPPCTDFAPARLVRADKGERREGTRAALTPLLVHQLTQMQMPLVVQENVVSIESMTRGQVAFALARERGYHLFFLRLNASDFGPAYQRRRLFVV 174
            ++V DL  G GG S  ++ +G  VV A D    A   Y AN G  A +   +D+    +   +A     M+V GPPC D++ A       GER+EG  A +T      +   +    + ENV   ++      A A+    GY L   +L+AS +G A  RRRLFVV
Sbjct:   10 LRVVDLFCGAGGLSLGLKNSGLDVVQAYDAWQPAIDTYRANVGHHAWKHDLKDILG--VGSMIAQLQPDMIVGGPPCQDYSIA-------GERQEGQNAVMTKAFAMMVAIARPRWFLMENVEQAKNSKAWAEARAILVRAGYGLTECKLDASYYGVAQARRRLFVV 167          
BLAST of jgi.p|Trimin1|165506 vs. uniprot
Match: A0A841M0W5_9HYPH (Cytosine-specific methyltransferase n=4 Tax=Paenochrobactrum gallinarii TaxID=643673 RepID=A0A841M0W5_9HYPH)

HSP 1 Score: 63.5 bits (153), Expect = 1.150e-8
Identity = 54/167 (32.34%), Postives = 78/167 (46.71%), Query Frame = 0
Query:    9 VKVADLCAGIGGFSRAVQMAGGRVVYAMDHNAAAKPVYDANRGVSAELSTRDLYTS-EMWEQLAASGAGMVVTGPPCTDFAPARLVRADKGERREGTRAALTPLLVHQLTQMQMPLVVQENVVSIESMTRGQVAFALARERGYHLFFLRLNASDFGPAYQRRRLFVV 174
            ++  +L  G GG S  +Q AG  ++ A D  + A   Y  N G    +S RDL    EM   +A     ++  GPPC D++ A       G+R EG  A LT      +   +    V ENV         Q A A+  + GY L   +L+AS +G A +R+RLFV+
Sbjct:    1 MRAVELFCGAGGMSLGLQRAGVDIIQAYDAWSPAVETYRHNLG--HHVSQRDLKDIFEMGPLIADLSPDLICGGPPCQDYSVA-------GKRIEGENAGLTKTFAMLVCIARPEWFVMENVPQAARSDAWQNARAMLVKAGYGLSECKLDASWYGVAQKRKRLFVI 158          
BLAST of jgi.p|Trimin1|165506 vs. uniprot
Match: A0A7V6U0Q0_9HYPH (Cytosine-specific methyltransferase n=1 Tax=Brucella intermedia TaxID=94625 RepID=A0A7V6U0Q0_9HYPH)

HSP 1 Score: 61.2 bits (147), Expect = 7.210e-8
Identity = 52/167 (31.14%), Postives = 76/167 (45.51%), Query Frame = 0
Query:    9 VKVADLCAGIGGFSRAVQMAGGRVVYAMDHNAAAKPVYDANRGVSAELSTRDLYTS-EMWEQLAASGAGMVVTGPPCTDFAPARLVRADKGERREGTRAALTPLLVHQLTQMQMPLVVQENVVSIESMTRGQVAFALARERGYHLFFLRLNASDFGPAYQRRRLFVV 174
            V+V DL AG  G S  ++ AG  V+ A D+   A   Y  N G    +   DL     +   +A     M+  GPPC D++ A       GER+EG  A++T      +T  +    + ENV           A  + +  GY L   +L+AS FG A  R+RLF++
Sbjct:    8 VRVVDLFAGAAGMSLGLRNAGFDVIQAYDNWQPAVDTYRENIG--HHIWKHDLNDILGVGSMIANLQPDMIAGGPPCQDYSVA-------GERQEGKNASMTKAFAMLVTISRPAWFLMENVDQAAKSQAWAEARTILQRAGYGLTEAKLDASYFGVAQARKRLFII 165          
BLAST of jgi.p|Trimin1|165506 vs. uniprot
Match: A0A345E2Z1_9EURY (DNA cytosine methyltransferase n=1 Tax=Haloplanus rubicundus TaxID=1547898 RepID=A0A345E2Z1_9EURY)

HSP 1 Score: 60.5 bits (145), Expect = 1.330e-7
Identity = 52/170 (30.59%), Postives = 78/170 (45.88%), Query Frame = 0
Query:   13 DLCAGIGGFSRAVQMAGGRVVYAMDHNAAAKPVYDANRG---VSAELS--TRDLYTSEMWEQLAASGAGMVVTGPPCTDFAPARLVRADKGERREGTRAALTPLLVHQLTQMQMPLVVQENVVSIESMTRGQVAFAL---ARERGYHLFFLRLNASDFGPAYQRRRLFVV 174
            DL  G GGFS     AG  VV A D+  +A   Y  N     + A+++   R++          A    +VV GPPC  F+ A +   D        R++L    +  +  +Q   +V ENV   +++  G    AL   AR+ GY +  ++LNA+D+G    R RLF V
Sbjct:    9 DLFCGAGGFSLGFSHAGFDVVAATDYQESAGKTYTHNLDAPFLQADVADLAREIEPLVTLGNFDAGAIDVVVGGPPCKGFSTAGVYNPDD------PRSSLLHHYIRAVEHLQPRAIVVENVPGAKAVRDGTYVDALLRNARDLGYKIRMMKLNAADYGVPQLRERLFFV 172          
BLAST of jgi.p|Trimin1|165506 vs. uniprot
Match: UPI000B2EFF44 (DNA (cytosine-5-)-methyltransferase n=1 Tax=Prevotella lascolaii TaxID=1776379 RepID=UPI000B2EFF44)

HSP 1 Score: 59.7 bits (143), Expect = 2.740e-7
Identity = 55/176 (31.25%), Postives = 83/176 (47.16%), Query Frame = 0
Query:    4 PGPDAVKVA--DLCAGIGGFSRAVQMAGGRVVYAMDHNAAAKPVYDANRGVSAELSTRDLYTSEMWEQLAASGAGMVVTGPPCTDFAPARLVRADKGERREGTRAALTPLLVHQLTQMQMPLVVQENVVSIESMTRGQVAFALA---RERGYHLFFLRLNASDFGPAYQRRRLFVV 174
            P P+  K    DL AG+GGF  A+Q  GG+ VY+ +  AAA+  Y AN G   E+   D+ T E  ++       ++  G PC  F+ A + +    E    TR  L   +   L + +      ENV  + +   G+    +    R  GY +    L+ASDFG A  RRR+++V
Sbjct:  124 PAPENPKFTFIDLFAGMGGFRIAMQQLGGKCVYSSEFKAAAQQAYIANYG---EMPFGDI-TKESTKRYIPDHFDILCAGFPCQAFSAAGVRKGFADE----TRGTLFFEVARILKEKRPKGFFLENVEGLVNHDGGRTLHIILDTLRSLGYKVSHRVLDASDFGVAQARRRIYIV 291          
BLAST of jgi.p|Trimin1|165506 vs. uniprot
Match: UPI001F373FFB (DNA (cytosine-5-)-methyltransferase n=1 Tax=[Ochrobactrum] teleogrylli TaxID=2479765 RepID=UPI001F373FFB)

HSP 1 Score: 58.9 bits (141), Expect = 4.630e-7
Identity = 54/168 (32.14%), Postives = 74/168 (44.05%), Query Frame = 0
Query:    9 VKVADLCAGIGGFSRAVQMAGGRVVYAMDHNAAAKPVYDANRG--VSAELSTRDLYTSEMWEQLAASGAGMVVTGPPCTDFAPARLVRADKGERREGTRAALTPLLVHQLTQMQMPLVVQENVVSIESMTRGQVAFALARERGYHLFFLRLNASDFGPAYQRRRLFVV 174
            V+V DL  G GG S  ++ AG  V+ A D+   A   Y AN G  V A      L    M   L      M+  GPPC D++ A       GER+EG  A +T      +T  +    + ENV           A  +    GY L   +L+AS +G A  R+RLF++
Sbjct:   27 VRVIDLFCGAGGMSCGLRNAGFDVIRAYDNWQPAISTYRANIGSHVWAHNLNDILGIGPMLSSLQPD---MIAGGPPCQDYSVA-------GERQEGENANMTKAFAMLVTIARPQWFLMENVEQARRSRVWAEARTILVRAGYGLTEAKLDASYYGVAQSRKRLFII 184          
BLAST of jgi.p|Trimin1|165506 vs. uniprot
Match: A0A0H2LWU9_VARPD (DNA (cytosine-5-)-methyltransferase n=1 Tax=Variovorax paradoxus TaxID=34073 RepID=A0A0H2LWU9_VARPD)

HSP 1 Score: 55.8 bits (133), Expect = 4.480e-6
Identity = 53/168 (31.55%), Postives = 82/168 (48.81%), Query Frame = 0
Query:    9 VKVADLCAGIGGFSRAVQMAGGRVVYAMDHNAAAKPVYDANRGVSAELSTRDLYTSEMWEQLAASGAGMVVTGPPCTDFAPARLVRADKGERREGTR-AALTPLLVHQLTQMQMPLVVQENVVSIESMTRGQVAFALARER-GYHLFFLRLNASDFGPAYQRRRLFVV 174
            V VAD+ AG+GGFS   ++AG RVV+A +H  AA  ++  N     E + +DL  ++ W  + +    +++  P C   +PAR       + +  T  A ++ +  HQ         V ENV    +      A+  A    GY L  + LNA+D G   +R+RLFVV
Sbjct:    3 VDVADMFAGLGGFSEGARLAGCRVVWAANHWRAAVDMHALNHP-ETEHACQDLEQAD-WRTVPSHD--VLLASPACQGHSPARGAEKPHHDAQRSTAWAVVSAVEYHQPVAF-----VAENVRQFATKWVLYRAWCEAMHALGYALAPMVLNAADSGVPQERKRLFVV 161          
BLAST of jgi.p|Trimin1|165506 vs. uniprot
Match: A0A0U3RVY6_9EURY (DNA-cytosine modification methylase n=4 Tax=Thermococcus TaxID=2263 RepID=A0A0U3RVY6_9EURY)

HSP 1 Score: 55.5 bits (132), Expect = 6.230e-6
Identity = 49/172 (28.49%), Postives = 79/172 (45.93%), Query Frame = 0
Query:    9 VKVADLCAGIGGFSRAVQMAGGRVVYAMDHNAAAKPVYDAN--RGVSAELSTRDLYTSEMWEQLAASGAGMVVTGPPCTDFAPARLVRADKGERR--EGTRAALTPLLVHQLTQMQMPLVVQENVVSIESMTRGQVAFALARE---RGYHLFFLRLNASDFGPAYQRRRLFV 173
            ++V DL AG GGFSR  + AG ++V A+++       Y AN    V      + L + ++ +++      +++ GPPC  F    L R +    R        L    +  L   + P+ V E V  +     G +  AL +E    GY ++F  LNA D+G    RRR+F+
Sbjct:    1 MRVIDLFAGAGGFSRGFKEAGFKIVAAVENFPPKAKSYQANFPEAVIFVEDIKRLDSEKLKKEIGE--VEVIIGGPPCEPFTAINLKRKENPIDRLYNDPTGRLVLHFIRFLKVFKPPIFVMEEVPQV---MEGPLREALRKEFKKAGYEVYFNVLNAYDYGTPQIRRRVFI 167          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|165506 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A835Z872_9STRA1.050e-10391.38S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A835YZ35_9STRA1.220e-3545.93Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
UPI000EFA37C48.670e-932.93DNA (cytosine-5-)-methyltransferase n=1 Tax=Brucel... [more]
A0A841M0W5_9HYPH1.150e-832.34Cytosine-specific methyltransferase n=4 Tax=Paenoc... [more]
A0A7V6U0Q0_9HYPH7.210e-831.14Cytosine-specific methyltransferase n=1 Tax=Brucel... [more]
A0A345E2Z1_9EURY1.330e-730.59DNA cytosine methyltransferase n=1 Tax=Haloplanus ... [more]
UPI000B2EFF442.740e-731.25DNA (cytosine-5-)-methyltransferase n=1 Tax=Prevot... [more]
UPI001F373FFB4.630e-732.14DNA (cytosine-5-)-methyltransferase n=1 Tax=[Ochro... [more]
A0A0H2LWU9_VARPD4.480e-631.55DNA (cytosine-5-)-methyltransferase n=1 Tax=Variov... [more]
A0A0U3RVY6_9EURY6.230e-628.49DNA-cytosine modification methylase n=4 Tax=Thermo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001525C-5 cytosine methyltransferasePRINTSPR00105C5METTRFRASEcoord: 120..134
score: 26.73
coord: 163..174
score: 29.57
coord: 10..26
score: 37.59
IPR001525C-5 cytosine methyltransferasePFAMPF00145DNA_methylasecoord: 10..174
e-value: 1.6E-18
score: 67.2
IPR001525C-5 cytosine methyltransferasePROSITEPS51679SAM_MT_C5coord: 9..174
score: 25.827986
IPR029063S-adenosyl-L-methionine-dependent methyltransferase superfamilyGENE3D3.40.50.150Vaccinia Virus protein VP39coord: 6..174
e-value: 2.4E-27
score: 97.4
IPR029063S-adenosyl-L-methionine-dependent methyltransferase superfamilySUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 9..174
NoneNo IPR availablePANTHERPTHR46098TRNA (CYTOSINE(38)-C(5))-METHYLTRANSFERASEcoord: 8..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_38contigContig_38:335905..336426 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|165506mRNA_9294Tribonema minus UTEX_B_3156 mRNAContig_38 335905..336426 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|165506|e_gw1.38.43.1 ID=Trimin1|165506|e_gw1.38.43.1|Name=jgi.p|Trimin1|165506|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=174bp
MGDPGPDAVKVADLCAGIGGFSRAVQMAGGRVVYAMDHNAAAKPVYDANR
GVSAELSTRDLYTSEMWEQLAASGAGMVVTGPPCTDFAPARLVRADKGER
REGTRAALTPLLVHQLTQMQMPLVVQENVVSIESMTRGQVAFALARERGY
HLFFLRLNASDFGPAYQRRRLFVV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001525C5_MeTfrase
IPR029063SAM-dependent_MTases_sf