mRNA_9311 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|165483
Unique NamemRNA_9311
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|165483 vs. uniprot
Match: A0A836CF65_9STRA (Putative RNA lariat debranching enzyme n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF65_9STRA)

HSP 1 Score: 789 bits (2037), Expect = 4.080e-289
Identity = 372/372 (100.00%), Postives = 372/372 (100.00%), Query Frame = 1
Query:    1 MLNVVVEGCSHGELDPIYASVARIEEAASIKVDLLLCCGDFQSLRDAGDFEGMAVPAHHRHLASFHDYYHGRKVAPVLTIFIGGNHEASNYLQELHYGGWVAPNIYFLGFSGVVNVGGIRIGGLTGIYNHRHYSLGHFEAPPYSPDTLRSVYHVREYDVYKLAQLTGKVDIMMSHDWPRGIARHGNVGRLLQRKSYFREEIEDNTLGSPPAEQLLHMLKPAYWFSAHLHTKFAALVKHDDGTETRFLALDKCLPNREFLQLVSLPRPTGRGAPVLRYDPEWLAIVKKTHHLLSSHRGNVYLPTECERVTDEEIADVRKRFDRVPHNFNPPPRPHNGGAGALQGDPQVLDRVCSFIMHTGRLCVYVYVCGPRA 1116
            MLNVVVEGCSHGELDPIYASVARIEEAASIKVDLLLCCGDFQSLRDAGDFEGMAVPAHHRHLASFHDYYHGRKVAPVLTIFIGGNHEASNYLQELHYGGWVAPNIYFLGFSGVVNVGGIRIGGLTGIYNHRHYSLGHFEAPPYSPDTLRSVYHVREYDVYKLAQLTGKVDIMMSHDWPRGIARHGNVGRLLQRKSYFREEIEDNTLGSPPAEQLLHMLKPAYWFSAHLHTKFAALVKHDDGTETRFLALDKCLPNREFLQLVSLPRPTGRGAPVLRYDPEWLAIVKKTHHLLSSHRGNVYLPTECERVTDEEIADVRKRFDRVPHNFNPPPRPHNGGAGALQGDPQVLDRVCSFIMHTGRLCVYVYVCGPRA
Sbjct:    1 MLNVVVEGCSHGELDPIYASVARIEEAASIKVDLLLCCGDFQSLRDAGDFEGMAVPAHHRHLASFHDYYHGRKVAPVLTIFIGGNHEASNYLQELHYGGWVAPNIYFLGFSGVVNVGGIRIGGLTGIYNHRHYSLGHFEAPPYSPDTLRSVYHVREYDVYKLAQLTGKVDIMMSHDWPRGIARHGNVGRLLQRKSYFREEIEDNTLGSPPAEQLLHMLKPAYWFSAHLHTKFAALVKHDDGTETRFLALDKCLPNREFLQLVSLPRPTGRGAPVLRYDPEWLAIVKKTHHLLSSHRGNVYLPTECERVTDEEIADVRKRFDRVPHNFNPPPRPHNGGAGALQGDPQVLDRVCSFIMHTGRLCVYVYVCGPRA 372          
BLAST of jgi.p|Trimin1|165483 vs. uniprot
Match: A0A4D9D7I0_9STRA (DBR1 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D7I0_9STRA)

HSP 1 Score: 421 bits (1083), Expect = 2.250e-140
Identity = 220/412 (53.40%), Postives = 272/412 (66.02%), Query Frame = 1
Query:    4 LNVVVEGCSHGELDPIYASVARIEEAASIKVDLLLCCGDFQSLRDAGDFEGMAVPAHHRHLASFHDYYHGRKVAPVLTIFIGGNHEASNYLQELHYGGWVAPNIYFLGFSGVVNVGGIRIGGLTGIYNHRHYSLGHFEAPPYSPDTLRSVYHVREYDVYKLAQL---------TGKVDIMMSHDWPRGIARHGNVGRLLQRKSYFREEIEDNTLGSPPAEQLLHMLKPAYWFSAHLHTKFAALVKHDDGTE--------TRFLALDKCLPNREFLQLVSLPRPTGRGA-PV-LRYDPEWLAIVKKTHHLLSSHRGNVYLPTECERVTDEEIADVRKR----------------------FDRVPHNFNPPPRPHNGGAGALQGDPQVLDRVCSFIMHTGRLCVYVYVCGPRA 1116
            L +VVEGC HGELD IYAS+A IE+ +   VDLL+CCGDFQ++R+  D + M VP+ +  +ASFH YY G KVAPVLTIFIGGNHEASN+LQEL+YGGWVAPNIY+LG SGVV+VGG+RI G++GIYN R Y  GHFE PPYSP TLRS+YHVREY+V+KLAQL         +  VD+M+SHDWPRGI  HG++G+LL+ K YFR+E E NTLGS  AE LL++L+P+YWF+ HLH KFAA+V+H   T         T+FLALDKCLPNR+FLQLV +PRP  R   PV L YD EWLAI++ TH LLS     V LP E  RV  +++  VR R                      F +      P       G G+L+G PQ  D +   +    R+ V    C P+A
Sbjct:   85 LRIVVEGCCHGELDQIYASIALIEQESGQNVDLLICCGDFQAVRNKEDLKSMNVPSKYLTMASFHRYYSGEKVAPVLTIFIGGNHEASNHLQELYYGGWVAPNIYYLGCSGVVSVGGVRIAGISGIYNGRDYHRGHFEVPPYSPSTLRSIYHVREYEVFKLAQLASGSGARGDSAHVDVMLSHDWPRGIYHHGDMGQLLRTKPYFRKECETNTLGSQAAELLLNLLQPSYWFAGHLHCKFAAVVRHSSSTSQMSTPAKVTKFLALDKCLPNRDFLQLVEIPRPPDRWEQPVRLEYDLEWLAILRSTHSLLSRAEREVVLPRESRRVAPDDLEWVRARLAAACKRRGDDPSQALEIQPDAFVKTAPVHEPSSTDGLHGGGSLRGSPQT-DALLKLLELGHRVTVPYTPCPPQA 495          
BLAST of jgi.p|Trimin1|165483 vs. uniprot
Match: A0A1L8DFX6_9DIPT (Putative rna lariat debranching enzyme (Fragment) n=1 Tax=Nyssomyia neivai TaxID=330878 RepID=A0A1L8DFX6_9DIPT)

HSP 1 Score: 394 bits (1012), Expect = 1.120e-132
Identity = 192/335 (57.31%), Postives = 239/335 (71.34%), Query Frame = 1
Query:    4 LNVVVEGCSHGELDPIYASVARIEEAASIKVDLLLCCGDFQSLRDAGDFEGMAVPAHHRHLASFHDYYHGRKVAPVLTIFIGGNHEASNYLQELHYGGWVAPNIYFLGFSGVVNVGGIRIGGLTGIYNHRHYSLGHFEAPPYSPDTLRSVYHVREYDVYKLAQLTGKVDIMMSHDWPRGIARHGNVGRLLQRKSYFREEIEDNTLGSPPAEQLLHMLKPAYWFSAHLHTKFAALVKHDDGTETRFLALDKCLPNREFLQLVSLPRPTGRGAPV-LRYDPEWLAIVKKTHHLLSSHRGNVYLP----TECERVT--DEEIADVRKRFDRVPHNFNP 987
            + + VEGC+HGEL+ IY +V  IE+   IKVDLL+CCGDFQS R+  D   MAVP  +R + +F+ YY G K AP+LT+FIGGNHEASNYLQEL YGGWVAP IY+LG++GV+ VGG+RI GL+GI+    Y  GHFE PPYS  T+RSVYH+R  +V++L QL+GKVD+ +SHDWPRGI  HGN  +L++ K +FREEIE NTLG+   E LL+ LKP YWFSAHLH KFAA V+HD+GT T+FLALDKCLPNR FLQ++ +     +   + L YD EWL IVK T+HLLS      Y+P    TE  + T  DEE A V      +P NF P
Sbjct:    1 MRIAVEGCAHGELEKIYDTVEYIEKEQGIKVDLLICCGDFQSTRNLEDLNCMAVPPKYRDICTFYKYYSGEKKAPILTMFIGGNHEASNYLQELPYGGWVAPRIYYLGYAGVITVGGVRIAGLSGIFKAHDYHKGHFEMPPYSDSTVRSVYHIRNLEVFRLKQLSGKVDVCLSHDWPRGIYHHGNAEQLMRFKPFFREEIERNTLGNETCEDLLNFLKPNYWFSAHLHCKFAATVQHDEGTTTKFLALDKCLPNRRFLQILEVGEDVAKQEELKLYYDHEWLTIVKLTNHLLSVKHVTNYMPGPGGTERYQFTPTDEEKASVEMNLV-IPENFVP 334          
BLAST of jgi.p|Trimin1|165483 vs. uniprot
Match: D7FTN4_ECTSI (DBR1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTN4_ECTSI)

HSP 1 Score: 392 bits (1006), Expect = 5.050e-131
Identity = 195/338 (57.69%), Postives = 247/338 (73.08%), Query Frame = 1
Query:   88 IKVDLLLCCGDFQSLRDAGDFEGMAVPAHHRHLASFHDYYHGRKVAPVLTIFIGGNHEASNYLQELHYGGWVAPNIYFLGFSGVVNVGGIRIGGLTGIYNHRHYSLGHFEAPPYSPDTLRSVYHVREYDVYKLAQLTGKVDIMMSHDWPRGIARHGNVGRLLQRKSYFREEIEDNTLGSPPAEQLLHMLKPAYWFSAHLHTKFAALVKHD--------DGTE----TRFLALDKCLPNREFLQLVSLPRPTGR----GAP--------VLRYDPEWLAIVKKTHHLLSSHRGNVYLPTECERVTDEEIADVRKRFDR---------VPHNFN---PPP 993
            IKVDLL+CCGDFQ LR+  DF+G+A P  ++HL +FH YY G  VAPVLTIFIGGNHEAS+YLQELHYGGWVAPNIYFLGF+GVV VGG+RI G+TGI+N R Y  G  E PPY+ DTLRSVY+VRE +V+KLAQLTG VD+++SHDWPRGI R+G+   L ++K +F+ E+EDNTLGS  AEQLLH ++P YWF+AHLH KF A+V+H         +G+E    TRFL+LDKCLP+R+FLQLVS+PRP G+    GA         +L YD EWL+IV+++H+LLS+ RG+V +P E  RV  E++A +R+             +P NF    PPP
Sbjct:   21 IKVDLLICCGDFQCLRNTQDFDGLACPDKYKHLGTFHKYYSGELVAPVLTIFIGGNHEASSYLQELHYGGWVAPNIYFLGFAGVVRVGGVRIAGMTGIFNGRSYKEGRHERPPYNRDTLRSVYYVRELEVFKLAQLTGHVDLVLSHDWPRGIVRYGDARYLFRKKPFFKAEVEDNTLGSAAAEQLLHKVQPDYWFAAHLHVKFPAVVRHGSPREGQGREGSEVKGVTRFLSLDKCLPHRDFLQLVSVPRPEGQEQGPGAAGGGEGDEVLLEYDVEWLSIVQESHYLLSNSRGHVDMPFETPRVQVEQMASIREALAARGLPGGPLVIPENFAMTAPPP 358          
BLAST of jgi.p|Trimin1|165483 vs. uniprot
Match: UPI001EB035F3 (lariat debranching enzyme B-like n=2 Tax=Haliotis TaxID=6452 RepID=UPI001EB035F3)

HSP 1 Score: 394 bits (1013), Expect = 5.350e-130
Identity = 187/339 (55.16%), Postives = 246/339 (72.57%), Query Frame = 1
Query:    4 LNVVVEGCSHGELDPIYASVARIEEAASIKVDLLLCCGDFQSLRDAGDFEGMAVPAHHRHLASFHDYYHGRKVAPVLTIFIGGNHEASNYLQELHYGGWVAPNIYFLGFSGVVNVGGIRIGGLTGIYNHRHYSLGHFEAPPYSPDTLRSVYHVREYDVYKLAQLTGKVDIMMSHDWPRGIARHGNVGRLLQRKSYFREEIEDNTLGSPPAEQLLHMLKPAYWFSAHLHTKFAALVKHD--DGTE--TRFLALDKCLPNREFLQLVSLPRPTGRGAPVLRYDPEWLAIVKKTHHLLSSHRGNVYLPTECE------RVTDEEIADVRKRFD---RVPHNF 981
            + + VEGC HGELD IY ++  +E+  ++ VDLLL CGDFQ++R+  D   MAVP  ++ L +F+ YY G KVAPVLTIFIGGNHEASNYLQEL YGGWVAPNIY++G+ G+V VGGIRIGGL+GIY  + +  GHFE PPY+  T RSVYHVR  +V++  Q++  +DI +SHDWPRG+   G+V  L+++KS+F+EEIE NTLGSPPAE+LLH L+P+YWFSAHLH KFAALV+H   DG E  T+FL+LDKCLP R+FLQ++ +P  T +   +   DPEWL I+K T+HLL+      Y+P          +VTD+E+  +R  FD    +P+NF
Sbjct:    1 MKIAVEGCCHGELDKIYETIQHLEKKNNMTVDLLLICGDFQAVRNRADLPCMAVPPKYQRLNTFYKYYSGEKVAPVLTIFIGGNHEASNYLQELPYGGWVAPNIYYMGYGGIVQVGGIRIGGLSGIYKGKDFQRGHFERPPYNDSTKRSVYHVRNLEVFRFKQISRPIDIFLSHDWPRGVYHFGDVNGLVRQKSFFKEEIETNTLGSPPAEELLHFLQPSYWFSAHLHVKFAALVQHKAMDGVEKTTKFLSLDKCLPKRKFLQVIDVPHDTSQAMKI-HLDPEWLMILKLTNHLLNLSPSTRYMPGPGSNDRWDFKVTDQEMETIRDNFDGNLALPYNF 338          
BLAST of jgi.p|Trimin1|165483 vs. uniprot
Match: UPI001E2708D9 (lariat debranching enzyme n=1 Tax=Melitaea cinxia TaxID=113334 RepID=UPI001E2708D9)

HSP 1 Score: 390 bits (1001), Expect = 1.110e-129
Identity = 183/328 (55.79%), Postives = 241/328 (73.48%), Query Frame = 1
Query:    4 LNVVVEGCSHGELDPIYASVARIEEAASIKVDLLLCCGDFQSLRDAGDFEGMAVPAHHRHLASFHDYYHGRKVAPVLTIFIGGNHEASNYLQELHYGGWVAPNIYFLGFSGVVNVGGIRIGGLTGIYNHRHYSLGHFEAPPYSPDTLRSVYHVREYDVYKLAQLTGKVDIMMSHDWPRGIARHGNVGRLLQRKSYFREEIEDNTLGSPPAEQLLHMLKPAYWFSAHLHTKFAALVKHDDGTETRFLALDKCLPNREFLQLVSLPRPTGRGAPVLRYDPEWLAIVKKTHHLLSSHRGNVYLPT--ECERV----TDEEIADVRKRFDRV 969
            + + VEGC+HGEL+ IY  +  ++E  ++K+DLL+CCGDFQS+R+  D  GMAVP  ++ + +F+ YY G KVAP+LT+FIGGNHEASNYLQEL YGGWVAPNIY+LG +GVV  G +RIGGL+GI+    Y  G +E PPY+  +LRSVYH+R  DVY+L+Q+  K+D+M+SHDWPRGI  +G+   LL+RK +FRE+IE N LGSPPAE+L+H LKP YWF+AHLH +FAA+V H++  ET+FLALDKCLP R  LQ++ LP     G  +L+YD EWLAI+K T+HLLS    N +LP     ER     T +EI  V K F+ +
Sbjct:    1 MKIAVEGCAHGELETIYECIEFLQEEQNVKIDLLICCGDFQSVRNNDDLRGMAVPEKYQSICTFYKYYSGEKVAPILTLFIGGNHEASNYLQELPYGGWVAPNIYYLGRAGVVRFGNLRIGGLSGIFKGHDYLQGLWECPPYTQSSLRSVYHIRALDVYRLSQVKTKIDVMLSHDWPRGITNYGDRNELLRRKPFFREDIESNRLGSPPAEKLIHELKPKYWFAAHLHCQFAAVVGHENDEETKFLALDKCLPKRRHLQILDLPS-NYNGDMLLKYDSEWLAILKNTNHLLSVKNINCHLPGPGSDERYDFTPTPDEIQAVEKAFESL 327          
BLAST of jgi.p|Trimin1|165483 vs. uniprot
Match: UPI0008743B2A (lariat debranching enzyme n=1 Tax=Anoplophora glabripennis TaxID=217634 RepID=UPI0008743B2A)

HSP 1 Score: 389 bits (1000), Expect = 1.480e-129
Identity = 186/335 (55.52%), Postives = 241/335 (71.94%), Query Frame = 1
Query:    4 LNVVVEGCSHGELDPIYASVARIEEAASIKVDLLLCCGDFQSLRDAGDFEGMAVPAHHRHLASFHDYYHGRKVAPVLTIFIGGNHEASNYLQELHYGGWVAPNIYFLGFSGVVNVGGIRIGGLTGIYNHRHYSLGHFEAPPYSPDTLRSVYHVREYDVYKLAQLTGKVDIMMSHDWPRGIARHGNVGRLLQRKSYFREEIEDNTLGSPPAEQLLHMLKPAYWFSAHLHTKFAALVKHDDGTETRFLALDKCLPNREFLQLVSLPRPTGRGAPVLRYDPEWLAIVKKTHHLLSSHRGNVYLP----TECERVT--DEEIADVRKRFD---RVPHNF 981
            + + +EGC+HGEL+ IY ++  +EE  SIK+DLL+CCGDFQS R+ GD   MAVP  +  + SF+ YY G K AP+LTIFIGGNHE+SNYLQEL YGGWVAPNIY++G +GVVNVGG+RIGGL+GIY  R Y+ GHFE  PY  +T RSVYH+R  ++++L QL+G +DI +SHDWP GI + GN+ +LL+RK +F++++E   LG+ P E+LL+ LKP+YWFSAHLH KFAALV HDD + T+FLALDKCLP R+FLQ+V +P  T     V  YD EWL I+  T+HLL     N Y+P     E    T  +E    V  RF+   RVP+NF
Sbjct:    1 MKIAIEGCAHGELENIYETIQLLEEKESIKIDLLICCGDFQSSRNEGDLLCMAVPPKYAKICSFYKYYTGEKKAPILTIFIGGNHESSNYLQELPYGGWVAPNIYYMGCAGVVNVGGVRIGGLSGIYKSRDYTKGHFEKAPYDENTKRSVYHIRNLEIFRLKQLSGPLDIFLSHDWPNGIYKFGNISQLLKRKPFFKDDVESGQLGNKPIEELLYQLKPSYWFSAHLHCKFAALVTHDDTSITKFLALDKCLPKRKFLQIVDVPHDTESKIEV-NYDLEWLTILFLTNHLLCVKNINTYMPGPGGNERYNFTPSEENKQQVLARFNNELRVPNNF 334          
BLAST of jgi.p|Trimin1|165483 vs. uniprot
Match: R7U1B4_CAPTE (DBR1 domain-containing protein n=1 Tax=Capitella teleta TaxID=283909 RepID=R7U1B4_CAPTE)

HSP 1 Score: 390 bits (1002), Expect = 2.140e-129
Identity = 190/340 (55.88%), Postives = 239/340 (70.29%), Query Frame = 1
Query:    4 LNVVVEGCSHGELDPIYASVARIEEAASIKVDLLLCCGDFQSLRDAGDFEGMAVPAHHRHLASFHDYYHGRKVAPVLTIFIGGNHEASNYLQELHYGGWVAPNIYFLGFSGVVNVGGIRIGGLTGIYNHRHYSLGHFEAPPYSPDTLRSVYHVREYDVYKLAQLTGKVDIMMSHDWPRGIARHGNVGRLLQRKSYFREEIEDNTLGSPPAEQLLHMLKPAYWFSAHLHTKFAALVKHDDGTE-----TRFLALDKCLPNREFLQLVSLPRPTGRGAPVLRYDPEWLAIVKKTHHLLSSHRGNVYLPTE--CER----VTDEEIADVRKRFDR---VPHNF 981
            + + VEGC HGELD IY ++A IEE    KVDLLL CGDFQ++R+  DF  +AVP   R + +F+ YY G   APVLT+ IGGNHEASNY+QEL YGGW+A NIY+LG++GVV  GG+RIGGL+GI+  R ++ GHFE PPY+ DT RS YHVR  DV++L Q+   VDIM+SHDWP+ I  HGN  RLLQ+K +F++E+E  TLGS PAEQLLH LKP+YWFSAHLH KFAA V HD   E     T+FLALDKCLP R+FLQ++  P    +    L  DPEWL I++ T+HL++  RG  Y+P     ER     TDEE++D+R+ F     VP NF
Sbjct:    1 MKIAVEGCCHGELDKIYETIAFIEEKEKYKVDLLLICGDFQAVRNPSDFHALAVPPKFRKMNTFYKYYSGEAKAPVLTVLIGGNHEASNYMQELPYGGWLAENIYYLGYAGVVQFGGLRIGGLSGIFKGRDFNKGHFEHPPYNEDTKRSCYHVRSLDVFRLKQIQKPVDIMLSHDWPQNIYHHGNTRRLLQKKKFFQQEVEAGTLGSAPAEQLLHHLKPSYWFSAHLHVKFAARVAHDVAEEDPRKDTKFLALDKCLPRRKFLQIIDFPDQEDKSLE-LELDPEWLCILRSTNHLMNLGRGAQYMPGPGCSERYDFSTTDEELSDIRETFGSTFSVPDNF 339          
BLAST of jgi.p|Trimin1|165483 vs. uniprot
Match: A0A821WMQ8_9NEOP (Hypothetical protein n=5 Tax=Pieris TaxID=7115 RepID=A0A821WMQ8_9NEOP)

HSP 1 Score: 389 bits (999), Expect = 2.690e-129
Identity = 179/301 (59.47%), Postives = 232/301 (77.08%), Query Frame = 1
Query:    4 LNVVVEGCSHGELDPIYASVARIEEAASIKVDLLLCCGDFQSLRDAGDFEGMAVPAHHRHLASFHDYYHGRKVAPVLTIFIGGNHEASNYLQELHYGGWVAPNIYFLGFSGVVNVGGIRIGGLTGIYNHRHYSLGHFEAPPYSPDTLRSVYHVREYDVYKLAQLTGKVDIMMSHDWPRGIARHGNVGRLLQRKSYFREEIEDNTLGSPPAEQLLHMLKPAYWFSAHLHTKFAALVKHDDGTETRFLALDKCLPNREFLQLVSLPRPTGRGAPVLRYDPEWLAIVKKTHHLLSSHRGNVYLP 906
            + + VEGC+HGEL+ IY  V  ++E   IKVDLL+CCGDFQS+R+  D   MAVP  + ++ +F+ YY G KVAP+LTIFIGGNHEASNYLQEL +GGWVAPNIY+LG +GVV  G +R+GGL+GI+ +  Y  G +E+PPY+P++LRSVYH+R  DV++L+QL  KV +M+SHDWPRGI  +G+   LL+RK +FRE+IE N LGSPPAEQLL+ +KP YWF+AHLH +FAALVKHDD +ET+FLALDKCLP R  LQ++ LP     G   L++D EWLAI+K T+HLLS    + +LP
Sbjct:    1 MKIAVEGCAHGELEKIYECVETLQEREGIKVDLLICCGDFQSVRNNDDLRAMAVPEKYHNICTFYKYYSGEKVAPILTIFIGGNHEASNYLQELPFGGWVAPNIYYLGRAGVVQFGNLRLGGLSGIFKNHDYLQGLWESPPYTPNSLRSVYHIRSLDVFRLSQLKEKVHVMLSHDWPRGITNYGDKNNLLRRKPFFREDIESNKLGSPPAEQLLNQVKPDYWFAAHLHCQFAALVKHDDNSETKFLALDKCLPKRRHLQILDLPSEFA-GDKQLKHDLEWLAILKNTNHLLSVKNIDCHLP 300          
BLAST of jgi.p|Trimin1|165483 vs. uniprot
Match: C3YYS1_BRAFL (DBR1 domain-containing protein n=5 Tax=Branchiostoma TaxID=7737 RepID=C3YYS1_BRAFL)

HSP 1 Score: 390 bits (1002), Expect = 3.630e-129
Identity = 189/341 (55.43%), Postives = 246/341 (72.14%), Query Frame = 1
Query:    4 LNVVVEGCSHGELDPIYASVARIEEAASIKVDLLLCCGDFQSLRDAGDFEGMAVPAHHRHLASFHDYYHGRKVAPVLTIFIGGNHEASNYLQELHYGGWVAPNIYFLGFSGVVNVGGIRIGGLTGIYNHRHYSLGHFEAPPYSPDTLRSVYHVREYDVYKLAQLTGKVDIMMSHDWPRGIARHGNVGRLLQRKSYFREEIEDNTLGSPPAEQLLHMLKPAYWFSAHLHTKFAALVKHD-DGTET----RFLALDKCLPNREFLQLVSLPRPTGRGAPV-LRYDPEWLAIVKKTHHLLSSHRGNVYLPTECE------RVTDEEIADVRKRFD---RVPHNF 981
            + + VEGC+HG L+ IY ++  +E+   I+V+LLLCCGDFQ++R+A D E MAVP   R + SFH YY G K AP LTIFIGGNHEASNYL EL YGGWVAPNIY+LG++GVVNVGGIRIGG++GIY    Y  GH+EAPPY+ +  RS YH+R  +V+++ QL   +DIMMSHDWPRG+   GN   LL +KS+FR EIE NTLGSPPAE+LL  LKPAYWFS HLH KF A ++H+ +G ET    +FLALDKCLP R+FLQ++ +PR      P+ L+YD EWLA+++ T+HL S+ R  + +P++         V+ EE+  V+K F+   +VP NF
Sbjct:    1 MKIAVEGCAHGALEEIYGTLQYLEQQEGIQVELLLCCGDFQAVRNADDLECMAVPKKFRFMESFHKYYSGEKKAPYLTIFIGGNHEASNYLAELPYGGWVAPNIYYLGYAGVVNVGGIRIGGVSGIYKSHDYRKGHYEAPPYNENNKRSAYHIRSLEVFRMKQLKRPIDIMMSHDWPRGVYHCGNTKELLAKKSFFRNEIETNTLGSPPAEELLRALKPAYWFSGHLHCKFVAAIEHEKEGQETPKVTKFLALDKCLPRRDFLQVIDVPR--NEFEPLELQYDAEWLAVLQGTNHLFSTSRVPMNMPSQFTDDRWDYSVSSEEMEGVKKAFNGDLKVPENF 339          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|165483 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CF65_9STRA4.080e-289100.00Putative RNA lariat debranching enzyme n=1 Tax=Tri... [more]
A0A4D9D7I0_9STRA2.250e-14053.40DBR1 domain-containing protein n=2 Tax=Monodopsida... [more]
A0A1L8DFX6_9DIPT1.120e-13257.31Putative rna lariat debranching enzyme (Fragment) ... [more]
D7FTN4_ECTSI5.050e-13157.69DBR1 domain-containing protein n=2 Tax=Ectocarpus ... [more]
UPI001EB035F35.350e-13055.16lariat debranching enzyme B-like n=2 Tax=Haliotis ... [more]
UPI001E2708D91.110e-12955.79lariat debranching enzyme n=1 Tax=Melitaea cinxia ... [more]
UPI0008743B2A1.480e-12955.52lariat debranching enzyme n=1 Tax=Anoplophora glab... [more]
R7U1B4_CAPTE2.140e-12955.88DBR1 domain-containing protein n=1 Tax=Capitella t... [more]
A0A821WMQ8_9NEOP2.690e-12959.47Hypothetical protein n=5 Tax=Pieris TaxID=7115 Rep... [more]
C3YYS1_BRAFL3.630e-12955.43DBR1 domain-containing protein n=5 Tax=Branchiosto... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_38contigContig_38:490667..494862 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|165483|e_gw1.38.79.1
BRITEko00000,ko01000,ko03009
KEGG koko:K18328
GOsGO:0000003,GO:0000375,GO:0000377,GO:0000398,GO:0003006,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006139,GO:0006396,GO:0006397,GO:0006401,GO:0006725,GO:0006807,GO:0007124,GO:0007275,GO:0008150,GO:0008152,GO:0008380,GO:0008419,GO:0009056,GO:0009057,GO:0009790,GO:0009791,GO:0009793,GO:0009987,GO:0010154,GO:0010467,GO:0016049,GO:0016070,GO:0016071,GO:0016074,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022414,GO:0030447,GO:0031070,GO:0032196,GO:0032197,GO:0032501,GO:0032502,GO:0034470,GO:0034641,GO:0034655,GO:0034660,GO:0040007,GO:0043144,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044182,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0045292,GO:0046483,GO:0046700,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0061458,GO:0070783,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575
Preferred nameDBR1
DescriptionRNA lariat debranching enzyme activity
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGsKOG2863@1|root,KOG2863@2759|Eukaryota
Evalue8.27e-132
Seed ortholog2880.D7FTN4
Hectar predicted targeting categoryother localisation
TranscriptId165805
TrackFilteredModels1
ProteinId165483
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|165483gene_9311Tribonema minus UTEX_B_3156 geneContig_38 490667..494862 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|165483Trimin1|165483|e_gw1.38.79.1Tribonema minus UTEX_B_3156 polypeptideContig_38 490667..494862 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_9311_5exon_9311_5Tribonema minus UTEX_B_3156 exonContig_38 490667..490980 -
exon_9311_4exon_9311_4Tribonema minus UTEX_B_3156 exonContig_38 491760..492002 -
exon_9311_3exon_9311_3Tribonema minus UTEX_B_3156 exonContig_38 492702..492846 -
exon_9311_2exon_9311_2Tribonema minus UTEX_B_3156 exonContig_38 493536..493773 -
exon_9311_1exon_9311_1Tribonema minus UTEX_B_3156 exonContig_38 494684..494862 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_9311CDS_9311Tribonema minus UTEX_B_3156 CDSContig_38 494684..494862 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_9311 ID=mRNA_9311|Name=jgi.p|Trimin1|165483|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1119bp|location=Sequence derived from alignment at Contig_38:490667..494862- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCTGAACGTGGTGGTGGAGGGCTGCAGCCATGGTGAGCTGGATCCTAT
CTACGCTTCCGTAGCAAGGATAGAGGAGGCCGCTAGCATCAAAGTGGACC
TGCTGCTGTGCTGTGGAGACTTTCAGTCGCTGCGGGATGCGGGAGACTTT
GAGGGAATGGCGGTTCCCGCACACCACAGGCACCTGGCGTCCTTTCATGA
CTACTACCATGGTCGCAAAGTTGCCCCCGTGCTGACCATATTCATTGGGG
GGAATCACGAAGCCAGCAACTACTTGCAGGAACTGCACTACGGGGGTTGG
GTGGCTCCCAATATATATTTCCTGGGGTTCAGCGGCGTGGTCAATGTGGG
GGGCATCAGAATAGGGGGGCTTACGGGGATATACAACCACAGGCATTACA
GCCTAGGACATTTTGAGGCGCCGCCATACTCGCCAGACACGCTGCGCAGC
GTGTACCACGTGCGTGAGTACGATGTGTACAAGCTGGCGCAGCTCACGGG
CAAGGTGGACATTATGATGAGCCACGACTGGCCGCGCGGCATAGCGCGCC
ATGGCAACGTAGGGCGCCTGCTGCAGAGGAAATCCTACTTTCGCGAGGAG
ATTGAGGACAACACCCTTGGCAGCCCCCCTGCTGAGCAGCTGCTGCACAT
GCTCAAGCCCGCCTACTGGTTCAGCGCGCACTTGCACACAAAGTTTGCGG
CGCTGGTGAAGCATGATGACGGGACTGAGACGCGCTTTCTGGCGCTGGAC
AAGTGTTTGCCGAATCGCGAGTTCCTGCAGCTCGTGTCGCTGCCGAGACC
GACAGGCAGGGGCGCGCCAGTGCTCAGGTACGACCCGGAGTGGCTGGCCA
TAGTCAAGAAGACGCACCACCTGCTCTCCAGCCACCGCGGCAACGTCTAC
CTGCCCACAGAGTGCGAGCGCGTAACGGACGAGGAGATAGCGGACGTGCG
CAAGCGCTTCGACCGCGTGCCGCACAACTTCAACCCGCCGCCGCGGCCGC
ACAACGGCGGCGCCGGCGCGCTGCAGGGGGACCCACAGGTACTTGATCGT
GTGTGCTCGTTTATTATGCATACTGGAAGGCTCTGTGTGTATGTGTATGT
GTGTGGCCCGAGGGCATGA
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protein sequence of jgi.p|Trimin1|165483

>Trimin1|165483|e_gw1.38.79.1 ID=Trimin1|165483|e_gw1.38.79.1|Name=jgi.p|Trimin1|165483|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=373bp
MLNVVVEGCSHGELDPIYASVARIEEAASIKVDLLLCCGDFQSLRDAGDF
EGMAVPAHHRHLASFHDYYHGRKVAPVLTIFIGGNHEASNYLQELHYGGW
VAPNIYFLGFSGVVNVGGIRIGGLTGIYNHRHYSLGHFEAPPYSPDTLRS
VYHVREYDVYKLAQLTGKVDIMMSHDWPRGIARHGNVGRLLQRKSYFREE
IEDNTLGSPPAEQLLHMLKPAYWFSAHLHTKFAALVKHDDGTETRFLALD
KCLPNREFLQLVSLPRPTGRGAPVLRYDPEWLAIVKKTHHLLSSHRGNVY
LPTECERVTDEEIADVRKRFDRVPHNFNPPPRPHNGGAGALQGDPQVLDR
VCSFIMHTGRLCVYVYVCGPRA*
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mRNA from alignment at Contig_38:490667..494862-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_9311 ID=mRNA_9311|Name=jgi.p|Trimin1|165483|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4196bp|location=Sequence derived from alignment at Contig_38:490667..494862- (Tribonema minus UTEX_B_3156 )
ATGCTGAACGTGGTGGTGGAGGGCTGCAGCCATGGTGAGCTGGATCCTAT CTACGCTTCCGTAGCAAGGATAGAGGAGGCCGCTAGCATCAAAGTGGACC TGCTGCTGTGCTGTGGAGACTTTCAGTCGCTGCGGGATGCGGGAGACTTT GAGGGAATGGCGGTTCCCGCACACCACAGGTGATCTATGGGTTGTAAAAC TCGTTGCCTTCACTACCTGATTTCTGGCTCGAGTCATGCAGGTACAGTAG TGCCTTTGCCGTGAGGCACTCATGTACTGAGTGCGAAATCTTCCCAGCTC AGCAACACTTTCTACGAGCGCTTCAGTAGGAGTTGCCTGTCACGAAGTTC ACAACCAGAGGGCTATGTCGAGGGCGGGAAAAACCCGCGAACATCTCGGT GCAAGGTCAATCTTCTCCCTGTATTCAATGCGTATATAGTACACTTCAGA CCAGGTCCTCACGCCTGAAATCATGCCTCTCAATGCCACTCACATTCTGC TTCGCATATTCACGGCTACTGGTGTTTGGTGGTGATAGGACATGAAGTTG TGAGAGATTTGCTAGAGGATATACGGGCCCAATGCAACGCCTCGTATGTT GAACAAACAGAGATTTCGATCTGATTCGGCTTCAGTTAACGTGGGTCTCA TGGGTCAGTGTGGATGATTCCTGGGACTTCTCACCCTTGCGTACGTTGTC AACACAACTTTGTGCAACGCCATTTGTATGTGTTGAACTCTGAAGGCTAT ACCTGTGTGTAAATCCGCACGTACGCGTATCCTGTACTTTGGATGCAACG CCCGCCGCTGCGACTTAACGAGGCTTGCACATGACATTTTCTGAAGAAAT ATGGTGACGACACGGGCTATTTTAGGAATATGGCGGCGACAAAGTAATCG AAGAACACATCATTATGGGACTGATCGCATGCCACTACTTACATCAACTT CACATATGTATTCATGATGATTGCCTATAATGTCCAACAACAATTTCTAC AAGAGGAGCACAGCGCTGGCCTTTGTGTCATGGCTCAACTGCAATGGACA ACAACTTCCGCCTTTCCTGCGCTTGTGCCTGTGATGCAGGCACCTGGCGT CCTTTCATGACTACTACCATGGTCGCAAAGTTGCCCCCGTGCTGACCATA TTCATTGGGGGGAATCACGAAGCCAGCAACTACTTGCAGGAACTGCACTA CGGGGGTTGGGTGGCTCCCAATATATATTTCCTGGGGTTCAGCGGCGTGG TCAATGTGGGGGGCATCAGAATAGGGGGGCTTACGGGGATATACAACCAC AGGCATTACAGCCTAGGACATTTTGAGGTGAGACCACATGTATGCAAGTC GTTAAGGCTCTGGCAACGTTTTTCACTGCTGACAAGCATGTAATGCTCAT GTGTAAGCATGAACAACACAGTCGTGCCTTTTGTATCCTGTACTGAATGA ACGAGAATGATGAACAAAAAGCAGTAAACAAATGGAAAACATGCCACACA GCGTCATTGTGCTGTAGATGAGTAGGCCTGATTGTGAGAGGTGCCACCAC AGGGTGAATTTGTCTACAACTGGACTATCGCATGTAAGATGCCCCTGTTA CAGACGCCGCCACACTCTCCGGACATGCTGCACCTCACTTACCACATGCA AGAGTATGATGCGTGCCACCGTCACTGTTGCATGTGCTGTTGCTATGGTA CCACCTTCACTGTTGCATGTGAGGTGTCTGTTGCAGGCGCCGCCGTACTC GCCGGACATGCTGCACATTGTGTACCACGTGTGCGAGAACGATCTTGTAC CCACTTCACTGTTGCACGTGACAAGCCTGTTGCGACATGTACCAACTTCA CTGCCGCATGTGACGTGCCTGTCGCAGGCACCGCCATGTTCGCCTGATAC GCTGCGCAGCGTGTACCACGTGCGCGAATTTGACGTGTGCCAACGTTACT GTTGTATGTGCTGTACCTGTTGTTATGGTACCAACTTCACTGTTGCGTGT GACGTGCCTGTTGCAGGCGCCGCCATACTCGCCAGACACGCTGCGCAGCG TGTACCACGTGCGTGAGTACGATGTGTACAAGCTGGCGCAGCTCACGGGC AAGGTGGACATTATGATGAGCCACGACTGGCCGCGCGGCATAGCGCGCCA TGGCAACGTAGGTGAGCACTGCCTGCGACGCGCTCTTTGCACAAGAAACG TTCTACAAGAGGTCAGATAAACTATCCAATGTACACATGATCCAGGCTCA GCGACCATGGCAACGTAGGTGAGCCATGATGATGGCAGGGAGTGTTGATG AGCGACGTCCCACAAGAGGTCAGATGCAATATCTATTGCAAGGATGATCC AGGCTCAGCGACCGCGAGAAGCTCGTGTACCTCGCCAAACACATTTATGA CATGCTGTTGAAGTTTGGAAATGTGTGCGAGGTGTAGCACTGCAACTTCA CACGTGTGCTTGTGAATGCGCACCACCCCAGTTACGTGACACTGAGTTTA GCATCGGCAGTTTGATCCACTGCTGGAGACGGTTCGAGGCTGAGCGCTGT GCTCTTTGCTTAGGGCTAGGGCTAGGGTTAGATTTGGTTAGGCACGCTGC CAATCCCCGATCAGCCTCACTGCTTATGGCTGCGGGCCGGGCGCCCCCTT GAGCAGCTGCACACAATATCACAATGTACCCCTATCTATTTCACGCGATG CAAGATCGCTCGCACCACCACCCACAACTGCTGACCTGGTATGTATGACA TACCCTCATGTACTGTACTCTTTGTATATAATCCATACACTGCAAGATCG CTGGCTCTGTTGCCTACGACTGCTAACATGGCATGTATGACATATCTTCC CGGCACGCAGGGCGCCTGCTGCAGAGGAAATCCTACTTTCGCGAGGAGAT TGAGGACAACACCCTTGGCAGCCCCCCTGCTGAGCAGCTGCTGCACATGC TCAAGCCCGCCTACTGGTTCAGCGCGCACTTGCACACAAAGTTTGCGGCG CTGGTGAAGCATGATGACGGGACTGAGACGCGCTTTCTGGCGCTGGACAA GTGTTTGCCGAATCGCGAGTTCCTGCAGCTCGTGTCGCTGCCGAGACCGA CAGGTACTGGTCGCCATCATCATTTTGGCTTCGCTGTTTGAGGGAATGAT TTTCCTCGCAAATTTTGTGTCGTGCATGGAAGTGTATTGCAGTCTGCAGG TCGTGCCGCTGCCGAGAGCGATGGTACTGCTGCAGATCATCGTATCCGCT GCTTGTCAGGGGAACATGTTCCCCCCCCCGCAAATTCTGTGTTGTGCATG GCCGTACATTGCAGTTACACTCAGCATTTCAATTTGGATGAGTCTAAGTA GTGCTTCCTGACGGAGCGCCTGATCTGCTTTGCTGTGGGTTGCTCTGGCG CTCGGCTCACTCATCTTTGCAATAATAGGCCCCACCATAAGGCCATGCGA TACACCCACGTCTTGGTTAATTGACTTCTTGCCGTATACGAGTGTGCGCC GTCCTCATTGGGATCAAGTATTTGTCTCGCAAACTATGTGCCTACTTGCA TCAACAGTACTCCCCGCTGCTTCTGCCTTTGTCTTCCCGGTAGACACACC CCGCCAGACACGCGGTGCAACAGTACCATGCTCAGCACCAGCAAGAATTC ACCTCATCACCTGCTCGCCAGCCGCTATCCCCGCATCGTCTACTATCAGA ACCTGCGTACCTTACAGTTTATATGTACCTTAAGTGTGTGGCCCCTGCGC TGCCTGCAAACATGCCAGAAACCTGAGTATGCCTGTATCGATGTATCTCA TCCTTGAAACCCCTATGCCTCACTGCATATCCCTGTCCCATGCGCGTGTG CGCTGCCGCACCGCCTGCAGACACGCCAGAAGGCAGGGGCGCGCCAGTGC TCAGGTACGACCCGGAGTGGCTGGCCATAGTCAAGAAGACGCACCACCTG CTCTCCAGCCACCGCGGCAACGTCTACCTGCCCACAGAGTGCGAGCGCGT AACGGACGAGGAGATAGCGGACGTGCGCAAGCGCTTCGACCGCGTGCCGC ACAACTTCAACCCGCCGCCGCGGCCGCACAACGGCGGCGCCGGCGCGCTG CAGGGGGACCCACAGGTACTTGATCGTGTGTGCTCGTTTATTATGCATAC TGGAAGGCTCTGTGTGTATGTGTATGTGTGTGGCCCGAGGGCATGA
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Coding sequence (CDS) from alignment at Contig_38:490667..494862-

>mRNA_9311 ID=mRNA_9311|Name=jgi.p|Trimin1|165483|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1119bp|location=Sequence derived from alignment at Contig_38:490667..494862- (Tribonema minus UTEX_B_3156 )
ATGCTGAACGTGGTGGTGGAGGGCTGCAGCCATGGTGAGCTGGATCCTAT
CTACGCTTCCGTAGCAAGGATAGAGGAGGCCGCTAGCATCAAAGTGGACC
TGCTGCTGTGCTGTGGAGACTTTCAGTCGCTGCGGGATGCGGGAGACTTT
GAGGGAATGGCGGTTCCCGCACACCACAGGCACCTGGCGTCCTTTCATGA
CTACTACCATGGTCGCAAAGTTGCCCCCGTGCTGACCATATTCATTGGGG
GGAATCACGAAGCCAGCAACTACTTGCAGGAACTGCACTACGGGGGTTGG
GTGGCTCCCAATATATATTTCCTGGGGTTCAGCGGCGTGGTCAATGTGGG
GGGCATCAGAATAGGGGGGCTTACGGGGATATACAACCACAGGCATTACA
GCCTAGGACATTTTGAGGCGCCGCCATACTCGCCAGACACGCTGCGCAGC
GTGTACCACGTGCGTGAGTACGATGTGTACAAGCTGGCGCAGCTCACGGG
CAAGGTGGACATTATGATGAGCCACGACTGGCCGCGCGGCATAGCGCGCC
ATGGCAACGTAGGGCGCCTGCTGCAGAGGAAATCCTACTTTCGCGAGGAG
ATTGAGGACAACACCCTTGGCAGCCCCCCTGCTGAGCAGCTGCTGCACAT
GCTCAAGCCCGCCTACTGGTTCAGCGCGCACTTGCACACAAAGTTTGCGG
CGCTGGTGAAGCATGATGACGGGACTGAGACGCGCTTTCTGGCGCTGGAC
AAGTGTTTGCCGAATCGCGAGTTCCTGCAGCTCGTGTCGCTGCCGAGACC
GACAGGCAGGGGCGCGCCAGTGCTCAGGTACGACCCGGAGTGGCTGGCCA
TAGTCAAGAAGACGCACCACCTGCTCTCCAGCCACCGCGGCAACGTCTAC
CTGCCCACAGAGTGCGAGCGCGTAACGGACGAGGAGATAGCGGACGTGCG
CAAGCGCTTCGACCGCGTGCCGCACAACTTCAACCCGCCGCCGCGGCCGC
ACAACGGCGGCGCCGGCGCGCTGCAGGGGGACCCACAGGTACTTGATCGT
GTGTGCTCGTTTATTATGCATACTGGAAGGCTCTGTGTGTATGTGTATGT
GTGTGGCCCGAGGGCATGA
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