Trimin1|165458|e_gw1.38.122.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|165458
Unique NameTrimin1|165458|e_gw1.38.122.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length522
Homology
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BLAST of jgi.p|Trimin1|165458 vs. uniprot
Match: A0A835Z220_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z220_9STRA)

HSP 1 Score: 999 bits (2584), Expect = 0.000e+0
Identity = 522/522 (100.00%), Postives = 522/522 (100.00%), Query Frame = 0 
Query:    1 MRDWGLTPDLECYEVALRTCGRKGEPQKAMRLLRDMKASGFPPTNGHYSNGKPSEVAAAGDAAVALLQEMRSEGVEPDSDSYFKAIKSCHDGRALDILAQQTAAGLAVEPRTYKEAIGACAKVGLWRDALRLFDDQAAAEPGAVASXXXXXXXXXXXXLMLGKRAAQLLRVLRQREHSSSNSSSGGERVSSRAYLFAIMACRGDQSTGGDWQQALQILHSIPCARVTKHQCHAALDALARGGRYKEASDLISVFMARTLVAPGVWEYTAVINAYVTGGKWQRALQLYDRMLDALPGASLLRSTHHARMKAYWEGHKRLEVLTAFEDMVEAGIAPTLMEFTLAMQACAAMVQHGDTKRYKAAANLLQEMQMLKVKPDAFLMELAADCFAAAGQAAMALQVVQEMKQMSMAVPAGLNTAVLRACAKSDQWRSVLRAMEDVIAAEPTPTQESYHLAILACCSAGRVQRAIEVLNDMLARTKGKVPPCVEQTYGVIITTAVQRKHYTLVPTLFESMAQAGVEPQAM 522
            MRDWGLTPDLECYEVALRTCGRKGEPQKAMRLLRDMKASGFPPTNGHYSNGKPSEVAAAGDAAVALLQEMRSEGVEPDSDSYFKAIKSCHDGRALDILAQQTAAGLAVEPRTYKEAIGACAKVGLWRDALRLFDDQAAAEPGAVASXXXXXXXXXXXXLMLGKRAAQLLRVLRQREHSSSNSSSGGERVSSRAYLFAIMACRGDQSTGGDWQQALQILHSIPCARVTKHQCHAALDALARGGRYKEASDLISVFMARTLVAPGVWEYTAVINAYVTGGKWQRALQLYDRMLDALPGASLLRSTHHARMKAYWEGHKRLEVLTAFEDMVEAGIAPTLMEFTLAMQACAAMVQHGDTKRYKAAANLLQEMQMLKVKPDAFLMELAADCFAAAGQAAMALQVVQEMKQMSMAVPAGLNTAVLRACAKSDQWRSVLRAMEDVIAAEPTPTQESYHLAILACCSAGRVQRAIEVLNDMLARTKGKVPPCVEQTYGVIITTAVQRKHYTLVPTLFESMAQAGVEPQAM
Sbjct:    1 MRDWGLTPDLECYEVALRTCGRKGEPQKAMRLLRDMKASGFPPTNGHYSNGKPSEVAAAGDAAVALLQEMRSEGVEPDSDSYFKAIKSCHDGRALDILAQQTAAGLAVEPRTYKEAIGACAKVGLWRDALRLFDDQAAAEPGAVASXXXXXXXXXXXXLMLGKRAAQLLRVLRQREHSSSNSSSGGERVSSRAYLFAIMACRGDQSTGGDWQQALQILHSIPCARVTKHQCHAALDALARGGRYKEASDLISVFMARTLVAPGVWEYTAVINAYVTGGKWQRALQLYDRMLDALPGASLLRSTHHARMKAYWEGHKRLEVLTAFEDMVEAGIAPTLMEFTLAMQACAAMVQHGDTKRYKAAANLLQEMQMLKVKPDAFLMELAADCFAAAGQAAMALQVVQEMKQMSMAVPAGLNTAVLRACAKSDQWRSVLRAMEDVIAAEPTPTQESYHLAILACCSAGRVQRAIEVLNDMLARTKGKVPPCVEQTYGVIITTAVQRKHYTLVPTLFESMAQAGVEPQAM 522
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|165458 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835Z220_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 413..522
e-value: 9.2E-13
score: 50.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 163..295
e-value: 3.3E-9
score: 38.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 296..411
e-value: 2.3E-8
score: 35.6
coord: 1..54
e-value: 6.5E-8
score: 34.1
coord: 57..162
e-value: 3.3E-7
score: 31.8
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 116..134
e-value: 0.43
score: 10.9
coord: 449..474
e-value: 0.019
score: 15.2
coord: 18..41
e-value: 0.02
score: 15.1
coord: 267..292
e-value: 6.8E-4
score: 19.7
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 267..292
e-value: 1.3E-4
score: 19.9
coord: 12..44
e-value: 1.8E-5
score: 22.6
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 9..43
score: 11.191545
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 263..293
score: 8.582755
NoneNo IPR availablePANTHERPTHR47933PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIALcoord: 233..520
coord: 1..292

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_38contigContig_38:38726..42576 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|165458mRNA_9256Tribonema minus UTEX_B_3156 mRNAContig_38 38726..42576 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|165458|e_gw1.38.122.1 ID=Trimin1|165458|e_gw1.38.122.1|Name=jgi.p|Trimin1|165458|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=522bp
MRDWGLTPDLECYEVALRTCGRKGEPQKAMRLLRDMKASGFPPTNGHYSN
GKPSEVAAAGDAAVALLQEMRSEGVEPDSDSYFKAIKSCHDGRALDILAQ
QTAAGLAVEPRTYKEAIGACAKVGLWRDALRLFDDQAAAEPGAVASRMYE
HALHACANLMLGKRAAQLLRVLRQREHSSSNSSSGGERVSSRAYLFAIMA
CRGDQSTGGDWQQALQILHSIPCARVTKHQCHAALDALARGGRYKEASDL
ISVFMARTLVAPGVWEYTAVINAYVTGGKWQRALQLYDRMLDALPGASLL
RSTHHARMKAYWEGHKRLEVLTAFEDMVEAGIAPTLMEFTLAMQACAAMV
QHGDTKRYKAAANLLQEMQMLKVKPDAFLMELAADCFAAAGQAAMALQVV
QEMKQMSMAVPAGLNTAVLRACAKSDQWRSVLRAMEDVIAAEPTPTQESY
HLAILACCSAGRVQRAIEVLNDMLARTKGKVPPCVEQTYGVIITTAVQRK
HYTLVPTLFESMAQAGVEPQAM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat