Trimin1|349163|estExt_Genemark1.C_Ctg_370112 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|349163
Unique NameTrimin1|349163|estExt_Genemark1.C_Ctg_370112
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length99
Homology
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BLAST of jgi.p|Trimin1|349163 vs. uniprot
Match: A0A835YUP5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUP5_9STRA)

HSP 1 Score: 172 bits (436), Expect = 4.130e-54
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0 
Query:    1 MARSAILGLLLAAGASAFIMPAAPRVPAVTCQVASAAVADAVSTDIDYESQIKKMEMEAKERIKKAFDEATVKSDAEAKERWAALEEDMRKAAASVGL 98
            MARSAILGLLLAAGASAFIMPAAPRVPAVTCQVASAAVADAVSTDIDYESQIKKMEMEAKERIKKAFDEATVKSDAEAKERWAALEEDMRKAAASVGL
Sbjct:    1 MARSAILGLLLAAGASAFIMPAAPRVPAVTCQVASAAVADAVSTDIDYESQIKKMEMEAKERIKKAFDEATVKSDAEAKERWAALEEDMRKAAASVGL 98
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BLAST of jgi.p|Trimin1|349163 vs. uniprot
Match: A0A836C7K0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7K0_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 3.310e-24
Identity = 66/105 (62.86%), Postives = 75/105 (71.43%), Query Frame = 0 
Query:   10 LLAAGASAFIMPAAPR-VPAVTCQVASAAVADAVSTDIDYESQIKKMEMEAKERIKKAFDEATVK---------------SDAEAKERWAALEEDMRKAAASVGL 98
            LL A ASAF+MPAAPR +P  T QVAS+ VADA+++DIDYESQIK ME+EA ERIKKAFD A V                SDAEAKERWA LE +M+ AAASVGL
Sbjct:   12 LLVAAASAFVMPAAPRSLP--TRQVASSGVADALASDIDYESQIKTMELEATERIKKAFDTAIVXXXXXXXXXXXXXXXXSDAEAKERWAKLEGEMKAAAASVGL 114
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349163 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835YUP5_9STRA4.130e-54100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836C7K0_9STRA3.310e-2462.86Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_37contigContig_37:975108..976098 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349163mRNA_7902Tribonema minus UTEX_B_3156 mRNAContig_37 974690..976577 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|349163|estExt_Genemark1.C_Ctg_370112 ID=Trimin1|349163|estExt_Genemark1.C_Ctg_370112|Name=jgi.p|Trimin1|349163|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=99bp
MARSAILGLLLAAGASAFIMPAAPRVPAVTCQVASAAVADAVSTDIDYES
QIKKMEMEAKERIKKAFDEATVKSDAEAKERWAALEEDMRKAAASVGL*
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