mRNA_7898 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|349161 vs. uniprot
Match: A0A836CFA8_9STRA (CwfJ C-terminus 1-domain-containing protein-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFA8_9STRA) HSP 1 Score: 1483 bits (3840), Expect = 0.000e+0 Identity = 825/825 (100.00%), Postives = 825/825 (100.00%), Query Frame = 1
Query: 1 MVKILVAGEVQGKYKTLFSKVAALNGGKAGPFDLLLCVGAFTSSDADGDLAPYLPIEESGEPAQAKPPIPTYFFEPGDSALLAPLLQQHDTDVQELAPDLFYLGRGGIRTVGKLTVAFLSETHTPEDLEAARTNANRGGYRGADVLLTSEWPRGFDADLPDAAIAHLKSVGVAAAGVGSAAAADMAVATRPRYHFGGGAGAYYQRAPYRNAMNDGSAAGIAGRCAHVTRFIAFHXXXXXXXXXXXXXXXXXXXXXXGLGPCAEGAVDKARRWLHAVSVEPIAFMGREALAEEPAGTTDNPYLAVQGGAGGGLKRAXXXXXXXXXXXGRGEFGGEEEDGGPLLKSAAVPAWVDKVAQDDSKSTSTGTFRWGAKAEGGGGRXXXXXXXXXRPPERSGGSAHSAPPEAVDPTNTVVYVGNVMQRNLDQADLSRKFATVGPLKSVRIADGALFGFVEFGRHDDAARALQVLDGTDLKGNALRLRWGQSRSGAGXXXXXXXXXXXXXXXXXXXXVTVFVGNLPKGDDLKDIHIRRELVRAGVAEADITDIRVTSKGYAFVQFASHAAAANAIVVAQGADIMGSSARCSWGTAQQSSADRGGGPHEGDQQRECWFCLASPTLEEHLVTNVAEEAYVALPKGGLVPDHVLIVPIAHIQRYSELSDACVKEVEAFKAALKAYYARQKCELFCFERCTGTKGANHMHIQAIPVPEGEAARGARMVLKADGLRFGMSFKEVPAGADLRQALQAKNYLYAEVPGEAPGSIIRLVHETSEALNDRGRPSIPLQFARDIAARLLLMPDRAQWKTCELSKDKETELAERFKEQFAEYSP 2475
MVKILVAGEVQGKYKTLFSKVAALNGGKAGPFDLLLCVGAFTSSDADGDLAPYLPIEESGEPAQAKPPIPTYFFEPGDSALLAPLLQQHDTDVQELAPDLFYLGRGGIRTVGKLTVAFLSETHTPEDLEAARTNANRGGYRGADVLLTSEWPRGFDADLPDAAIAHLKSVGVAAAGVGSAAAADMAVATRPRYHFGGGAGAYYQRAPYRNAMNDGSAAGIAGRCAHVTRFIAFHXXXXXXXXXXXXXXXXXXXXXXGLGPCAEGAVDKARRWLHAVSVEPIAFMGREALAEEPAGTTDNPYLAVQGGAGGGLKRAXXXXXXXXXXXGRGEFGGEEEDGGPLLKSAAVPAWVDKVAQDDSKSTSTGTFRWGAKAEGGGGRXXXXXXXXXRPPERSGGSAHSAPPEAVDPTNTVVYVGNVMQRNLDQADLSRKFATVGPLKSVRIADGALFGFVEFGRHDDAARALQVLDGTDLKGNALRLRWGQSRSGAGXXXXXXXXXXXXXXXXXXXXVTVFVGNLPKGDDLKDIHIRRELVRAGVAEADITDIRVTSKGYAFVQFASHAAAANAIVVAQGADIMGSSARCSWGTAQQSSADRGGGPHEGDQQRECWFCLASPTLEEHLVTNVAEEAYVALPKGGLVPDHVLIVPIAHIQRYSELSDACVKEVEAFKAALKAYYARQKCELFCFERCTGTKGANHMHIQAIPVPEGEAARGARMVLKADGLRFGMSFKEVPAGADLRQALQAKNYLYAEVPGEAPGSIIRLVHETSEALNDRGRPSIPLQFARDIAARLLLMPDRAQWKTCELSKDKETELAERFKEQFAEYSP
Sbjct: 1 MVKILVAGEVQGKYKTLFSKVAALNGGKAGPFDLLLCVGAFTSSDADGDLAPYLPIEESGEPAQAKPPIPTYFFEPGDSALLAPLLQQHDTDVQELAPDLFYLGRGGIRTVGKLTVAFLSETHTPEDLEAARTNANRGGYRGADVLLTSEWPRGFDADLPDAAIAHLKSVGVAAAGVGSAAAADMAVATRPRYHFGGGAGAYYQRAPYRNAMNDGSAAGIAGRCAHVTRFIAFHXXXXXXXXXXXXXXXXXXXXXXGLGPCAEGAVDKARRWLHAVSVEPIAFMGREALAEEPAGTTDNPYLAVQGGAGGGLKRAXXXXXXXXXXXGRGEFGGEEEDGGPLLKSAAVPAWVDKVAQDDSKSTSTGTFRWGAKAEGGGGRXXXXXXXXXRPPERSGGSAHSAPPEAVDPTNTVVYVGNVMQRNLDQADLSRKFATVGPLKSVRIADGALFGFVEFGRHDDAARALQVLDGTDLKGNALRLRWGQSRSGAGXXXXXXXXXXXXXXXXXXXXVTVFVGNLPKGDDLKDIHIRRELVRAGVAEADITDIRVTSKGYAFVQFASHAAAANAIVVAQGADIMGSSARCSWGTAQQSSADRGGGPHEGDQQRECWFCLASPTLEEHLVTNVAEEAYVALPKGGLVPDHVLIVPIAHIQRYSELSDACVKEVEAFKAALKAYYARQKCELFCFERCTGTKGANHMHIQAIPVPEGEAARGARMVLKADGLRFGMSFKEVPAGADLRQALQAKNYLYAEVPGEAPGSIIRLVHETSEALNDRGRPSIPLQFARDIAARLLLMPDRAQWKTCELSKDKETELAERFKEQFAEYSP 825
BLAST of jgi.p|Trimin1|349161 vs. uniprot
Match: D8LD91_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD91_ECTSI) HSP 1 Score: 314 bits (804), Expect = 1.320e-94 Identity = 234/791 (29.58%), Postives = 308/791 (38.94%), Query Frame = 1
Query: 100 LLLCVGAFTSSDADG-DLAPYLPIEESGEPAQAKPPIPTYFFEPGDSALLAPLLQQHDTDVQELAPDLFYLGRGGIRTVGKLTVAFLSETHTPEDLEAARTNANRGGYRGADVLLTSEWPRGFDADLPDAAIAHLKSVGVAAAGVGSAAAADMAVATRPRYHFGGGAGAYYQRAPYRNAMNDGSAAGIAGRCAHVTRFIAFHXXXXXXXXXXXXXXXXXXXXXXGLGPCAEGAV---DKARRWLHAVSVEPIAFMGREALAEEPAGTTDNPYLAVQGGAGGGLKRAXXXXXXXXXXXGRGEFGGEEEDGGPLLKSAAVPAWVDKVAQDDSKSTSTGTFRWGAKAEGGGGRXXXXXXXXXRPPERSGGSAHSAPPEAVDPTNTVVYVGNVMQRNLDQADLSRKFATVGPLKSVRIADGALFGFVEFGRHDDAARALQVLDGTDLKGNALRLRWGQSRSGAGXXXXXXXXXXXXXXXXXXXXVTVFVGNLPKGDDLKDIHIRRELVRAGVAEADITDIRVTSKGYAFVQFASHAAAANAIVVAQGADIMGSSARCSWGTAQQSSADRGGGPHEGDQQRECWFCLASPTLEEHLVTNVAEEAYVALPKGGLVPDHVLIVPIAHIQRYSELSDACVKEVEAFKAALKAYYARQKCELFCFERCTGTKGANHMHIQAIPVPEGEAARGARMVLKADGLRFGMSFKEVPAGADLRQALQAKNYLYAEVPGEAPGSIIRLVHETSEALNDRGRPSIPLQFARDIAARLLLMPDRAQWKTCELSKDKETELAERFKEQF 2460
++ VG TS D+ G D A P+ P P +P YFFE G S L+ L++H LE+ R + GY GAD+LL++EW RG + DLP+ L + VA A VGS A A +AVA +PRYHF GA++QR PYRN + G C H TRFI+ LG A G+ DK ++W+HA+++EPIAFM ++ L++ A TTD PY+ V DP N V+VGN+ ++ L F GPL + G +SG G GGPH+ D + ECWFCLASP LE+HLV +VA+E Y+A PKGGLVP HVLIVP++H QRYSELS KE E +K + K Y CE F FERC TKGA+H+HIQA+P+P GE +RGAR++++++G R GM+F+EVP ADLR L+ Y YAE+PG+ GS +RL+H R +PLQF RD+AA+LL MP+RA W+ C L K KE A+ FKE F
Sbjct: 1 MVFAVGPLTSPDSGGGDEAALSPVLAGETP----PAVPVYFFEAGGSESLSAKLEEHPY------------------------------------LESCRKVSAMAGYGGADLLLSTEWGRGMEVDLPERCFQELSAASVAPAAVGSEAVAKLAVAVKPRYHFAASEGAFFQRPPYRNYGSSG--------CMHTTRFIS-------------------------LGELAAGSAAPKDKTKKWVHALNLEPIAFMKKDDLSKRSADTTDCPYVPV------------------------------------------------------------------------------------------------------DPNNRTVFVGNLRSGDVSAEQLEALFRAAGPLSGLP---------------------------------------GAGKSGFG----------------------------------------------------------------------------------------------------------GGPHKADGRLECWFCLASPQLEDHLVCSVADEIYLAQPKGGLVPGHVLIVPVSHQQRYSELSAEGAKEAEQYKESFKRYCLSCGCEPFFFERCVPTKGAHHLHIQAVPIPAGEGSRGARILMRSEGTRHGMTFQEVPEDADLRATLKDGPYFYAELPGDVVGSRVRLIHRGGNIDARGNRRHVPLQFGRDVAAKLLSMPERAHWRDCSLPKAKEILQADIFKEAF 471
BLAST of jgi.p|Trimin1|349161 vs. uniprot
Match: A0A4D9DA10_9STRA (RRM domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DA10_9STRA) HSP 1 Score: 296 bits (757), Expect = 4.800e-85 Identity = 261/844 (30.92%), Postives = 366/844 (43.36%), Query Frame = 1
Query: 7 KILVAGEVQGKYKTLFSKVAALNGGKAGPFDLLLCVGAF--TSSDADGDLAPYLPIEESGEPAQAKPPIPTYFFEPGDSALLAPLLQQHDTDVQELAPDLFYLGRGGIRTVGKLTVAFLSETHTPEDLEAARTNANRGGYRGADVLLTSEWPRGFDADLPDAAIAHLKSVGVA-AAGVGSAAAADMAVATRPRYHFGGGAGAYYQRAPYRNAMNDGSAAGIAGRCAHVTRFIAFHXXXXXXXXXXXXXXXXXXXXXXGLGPCAEGAVDKARRWLHAVSVEPIAFMGREALAEEPAGTTDNPYLAVQGGAGGGLKRAXXXXXXXXXXXGRGEFGGE------EEDGGPLLKSAAVPAWVDKVAQDDSKSTSTGTFRWGAKAEGGGGRXXXXXXXXXRPPERSGGSAHSAPPEAVDPTNTVVYVGNVMQRNLDQADLSRKFATVGPLKSVRIADGALFGFVEFGRHDDAARALQVLDGTDLKGNALRLRWGQSRSGAGXXXXXXXXXXXXXXXXXXXXVTVFVGNLPKGDDLKDIHIRRELVRAGVAEADITDIRVTSKGYAFVQFASHAAAANAIVVAQGADIMGSSARCSWGTAQQSSADRGGGPHEGDQQRECWFCLASPTLEEHLVTNVAEEAYVALPKGGLVPDHVLIVPIAHIQRYSELSDACVKEVEAFKAALKAYYARQKC------------ELFCFERCTGTKGANHMHIQAIPVPEGEAARGARMVLKADGLRFGMSFKEVPAGADLRQA--LQAKNYLYAEVPGEAPGSIIRLVHETSEALNDRGRPSIPLQFARDIAARLLLMPDRAQWKTCELSKDKETELAERFKEQFAEY 2469
KILVAGEV+G+ LF++VA LN KAGPFD L G F + + +G +A E + P+ TYF E G SA A ++ P YLG GG+ VGKLTV FLS+ HT +D+E A+ + GAD+ L+++W +G A L ++GV AAG GS+ AD+AV RPRYHF G Y+QR PY+N A+ + +HVTRF++ L P AE A DKAR+WLHA+S+EPI +M AL +EPA T++PY + KR G+GE G +G L AV + +K +G F W AVDP+NT ++V N + DL R F+ G + +RI +G F FV F RH++A +AL G L +R+ W +S XXXXXXXXX G A + AA A+ ECWFCL S L+ V E Y+A+PKG L P+H+L++PI+H+ ++LS+ E E +KAAL+ YA K + FER T+GA H H+Q IPVP +AA G R + G G+ F+ + AG LR+ + + Y+Y EVPG + RL++ L G+ +PL F RD+ A LL P + WK C+L +++E + E K ++ ++
Sbjct: 2 KILVAGEVRGRLDLLFTRVATLNASKAGPFDTLFVTGEFFPPADEPEGGMA--TTAFEDYVMGVKEVPLSTYFIE-GPSAS-AEAKYGSVAPGSDVFPKCTYLGPGGLELVGKLTVGFLSQRHTDKDIEKIVEPASSSTFLGADIFLSTDWGQGVAAGY------DLSAMGVRDAAGTGSSTVADLAVVLRPRYHFAARPGIYFQRPPYKN-----HASKPKSKLSHVTRFLS-------------------------LAPAAE-AKDKARKWLHAISIEPIPYMTLAALVDEPADVTESPYSVFRTAGTASHKREGSG--------GQGEAGRVGSLKRVRAEGREGLSHQAVQQIQEXXX---AKRADSGMFFWXXXXX-------------------XXXXXXXXXXXAVDPSNTTLHVAN-LPPGFSADDLQRGFSHYGVVARIRIPEGKDFAFVSFTRHEEARQALDAR-GITLGCAGVRVSWSKSMPRQTGMPPAPPLPMPXXXXXXXXXXXXXXXXXXXGH---------------YGPASLAGPPTARLPPGXXXXXXRAAEASG--------------------------------------EECWFCLGSEKAAVDLLVTVGESLYMAVPKGPLSPEHLLLIPISHVAGLAQLSEGEWAEFERYKAALRGMYAEGKTGEGEGQGQREGQSMVLFERRLQTRGARHTHVQVIPVPNDKAA-GVREAFEEKGAALGVFFESLTAGTTLREMGLREEEQYMYVEVPGLGGKGVARLLYR----LPPGGK--LPLTFGRDVMADLLGAPGKVNWKNCQLGREEEAAMVEGLKARWEKW 712
BLAST of jgi.p|Trimin1|349161 vs. uniprot
Match: A0A6H5KVH2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVH2_9PHAE) HSP 1 Score: 200 bits (508), Expect = 1.310e-54 Identity = 127/307 (41.37%), Postives = 168/307 (54.72%), Query Frame = 1
Query: 1 MVKILVAGEVQGKYKTLFSKVAALNGGKAGPFDLLLCVGAFTSSDAD-GDLAPYLPIEESGEPAQAKPPIPTYFFEPGDSALLAPLLQQHDTDVQELAPDLFYLGRGGIRTVGKLTVAFLSETHTPEDLEAARTNANRGGYRGADVLLTSEWPRGFDADLPDAAIAHLKSVGVAAAGVGSAAAADMAVATRPRYHFGGGAGAYYQRAPYRNAMNDGSAAGIAGRCAHVTRFIAFHXXXXXXXXXXXXXXXXXXXXXXGLGPCAEGAV---DKARRWLHAVSVEPIAFMGREALAEEPAGTTDNPYLA 909
MVK+LVAG+V+G L +KVA N +AGPFD++ VG TS D+ GD A P+ P P +P YFFE G S L+ L++H Q++A +LFYLGRGGI+TVGKLTVAFLS +H P+ +EA +G + DLP+ L + GVA A VGS A A +AVA +PRYHF GA++QR PYRN + G C H TRFI+ LG A G+ DK ++W+HA+++EPIAFM +E L++ A TTD PY+A
Sbjct: 1 MVKVLVAGDVKGSVAQLLAKVAQYNKSRAGPFDMVFAVGPLTSPDSGCGDEAALSPVLAGETP----PAVPVYFFEAGGSESLSAKLEEHP--FQQVASNLFYLGRGGIKTVGKLTVAFLSTSHKPDGVEA----------------------KGMEVDLPERCFQELSAGGVAPAAVGSEAVAKLAVAVKPRYHFAASEGAFFQRPPYRNYGSSG--------CMHTTRFIS-------------------------LGELAAGSAAPKDKTKKWVHALNLEPIAFMKKEDLSKRSADTTDCPYVA 246
BLAST of jgi.p|Trimin1|349161 vs. uniprot
Match: F0YKH2_AURAN (RRM domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YKH2_AURAN) HSP 1 Score: 179 bits (454), Expect = 5.250e-44 Identity = 159/501 (31.74%), Postives = 220/501 (43.91%), Query Frame = 1
Query: 7 KILVAGEVQGKYKTLFSKVAALNGGKAGPFDLLLCVGAFTSSDADGDLAPYLPIEESGEPAQAKPPIPTYFFE-PGDSALLAPLLQQHDTDVQELAPDLFYLGRGGIRTVGK---------LTVAFLSETHTPEDLEAARTNANRGGYRGADVLLTSEWPRGFDADLPDAAIAHLKSVGVAAAGVGSAAAADMAVATRPRYHFGGGAGAYYQRAPYRNAMNDGSAAGIAGRCAHVTRFIAFHXXXXXXXXXXXXXXXXXXXXXXGLGPCAEGAVDKARRWLHAVSVEPIAFMGREALAEEPAGTTDNPYLAVQGGAGGGLKRAXXXXXXXXXXXGRGEFGGEEEDGGPLLKSAAVPAWVDKVAQDDSKSTSTGTFRWGAKAEGGGGRXXXXXXXXXRPPERSGGSAHSAPPEAVDPTNTVVYVGNVMQRNLDQADLSRKF-ATVGP--LKSVRIADGALFGFVEFGRHDDAARALQVL--DGTDLKGNALRLRWGQSRSGA 1464
KIL G+V+G+++ F +VA + GPFD L CVGAF + DA ++ + P+PT+ E P SA+ A L P++ YLG G+ TV + ++VAF + L A G+ G DV L+S+WPRG D DAA+A L+ +GV A VG A+ AVA RPRYHF G GA++ RAPYRNA + A R +HVTRF+A LG A+ DK R+WLHAV V+PI + ALA EPAG TD+PY+ + G A P + AA+ A D+ + + RWG + GG + P R G++ T ++VG + D A L+ A +G L R G +GF +FG DDAA+AL L G + G L + WG + + A
Sbjct: 2 KILCCGDVEGRFEETFKRVAKIEAAN-GPFDALFCVGAFFAGDAVTEVP--------------EAPVPTWVLELPAGSAVAAG---------DSLGPNVTYLGACGVTTVSERAGGSGAKVMSVAFAGGAGSVAGLLDA---CGAPGFMGCDVFLSSDWPRGCDVGADDAAVASLRDLGVYAHAVGDDRVAEAAVACRPRYHFAGTHGAFWARAPYRNARDP-----PAHRKSHVTRFVA-------------------------LGQAAKSK-DKRRKWLHAVDVDPIPYCALAALAAEPAGCTDSPYVCL------GPSVA------------------------PTPRMAALAA--DEARDSAKRKNAPSALRWGDVSGGG------------KRPRRDEGAS------------TTLFVGG-LPPYCDDAKLAETLRAALGDVDLAGARAPPGKGYGFADFGARDDAAKALDRLLAAGLAIDGRRLTVDWGTATAPA 387
BLAST of jgi.p|Trimin1|349161 vs. uniprot
Match: A0A7S2F7S3_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F7S3_9STRA) HSP 1 Score: 172 bits (435), Expect = 1.680e-43 Identity = 124/341 (36.36%), Postives = 174/341 (51.03%), Query Frame = 1
Query: 1531 TVFVGNLPKGDDLKDIHIRRELVRAGVAEADITDIRVT-SKGYAFVQFASHAAAANAIVVAQGADIMGS--SARCSWGTAQQ---SSADRGGGPHEGD----QQRECWFCLASPTLEEHLVTNVAEEAYVALPKGGLVPDHVLIVPIAHIQRYSELSDACVKEVEAFKAALKAYYARQ-KCELFCFERCTGTKGANHMHIQAIPV-------PEGEAARGARMVLKAD--------GLRFGMSFKEVPAGADLR-QALQAKNYLYAEVPGEAPGSI----IRLVHETSEALNDRGRPSIPLQFARDIAARLLLMPDRAQWKTCELSKDKETELAERFKEQF 2460
TVF+G L G + E G+A A + +IRV K YAF++F +HAAA+ A G + GS WGT+++ S+A++ H + ++ +CWFCLASP LE HL+ +VAE Y+A+PKGG+VP HVL+VPI H+ R S+L + E+ +K L A ++ + FERC T+G HMH QAIPV P + L + G + GM+F++V A + + L A Y Y EV G S+ +R+VH N PS L FAR + A L P+RA WK C + +E LA RFK F
Sbjct: 19 TVFLGGLMPGVMSDALTRSLESSVPGLAAA-LVEIRVPPGKNYAFIEFKTHAAASEARSSLDGVRLPGSHNELNARWGTSKKDSNSNAEKRPHTHRHNTPSFERHDCWFCLASPQLEAHLIVSVAEHVYLAIPKGGMVPQHVLLVPIDHVTRQSDLGPPVLSELLRYKQGLAASFSADLDSAMVVFERCADTRGTYHMHQQAIPVARHLLTLPHADKDNSNATALNNNLHSIFRNAGAQIGMNFEDVKASDETDVKGLDADRYYYIEVWGLKGASLTSPAVRMVHRVPAGAN----PS--LNFARQVLADLFRTPERAHWKACVVPPPEEEALAMRFKAGF 352
BLAST of jgi.p|Trimin1|349161 vs. uniprot
Match: K3X1K7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X1K7_GLOUD) HSP 1 Score: 176 bits (446), Expect = 3.460e-43 Identity = 91/221 (41.18%), Postives = 141/221 (63.80%), Query Frame = 1
Query: 1807 QQRECWFCLASPTLEEHLVTNVAEEAYVALPKGGLVPDHVLIVPIAHIQRYSELSDACVKEVEAFKAALKAYYARQKCELFCFERCTGTKGANHMHIQAIPVPEGEAARGARMVLKADGLRFGMSFKEVPAGADLRQALQAKNYLYAEVPGEAPGSIIRLVHETSEALNDRGRPSIPLQFARDIAARLLLMPDRAQWKTCELSKDKETELAERFKEQFAEY 2469
++ ECWFCLA+P++E HL+ ++ +EAY+A+PKG + PDH+LIVPIAH +L KEVE FK+AL+ ++A Q ++ F+R T GA H H+Q I +P +AA AR V + +G ++ + F+ + ADL+Q K + YAEVPGE G+++RL++ G+ +QF R AA +L MP RA WK C + K +E ++ ++FKEQ+ ++
Sbjct: 360 ERTECWFCLATPSVERHLIVSIGQEAYLAMPKGAINPDHLLIVPIAHEASSMKLRADTWKEVERFKSALREFFASQDKDMIVFDRNIQTIGATHCHLQVIGIPRAKAAI-ARRVFEGEGEKYNVRFEVLEKDADLQQTTDGKPFFYAEVPGEE-GNVVRLLNFVE------GKHY--MQFGRHAAACVLEMPRRANWKYCVVPKPEEEQMTKQFKEQWKQF 570
BLAST of jgi.p|Trimin1|349161 vs. uniprot
Match: A0A2D4CI85_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CI85_PYTIN) HSP 1 Score: 171 bits (432), Expect = 2.230e-41 Identity = 87/221 (39.37%), Postives = 132/221 (59.73%), Query Frame = 1
Query: 1807 QQRECWFCLASPTLEEHLVTNVAEEAYVALPKGGLVPDHVLIVPIAHIQRYSELSDACVKEVEAFKAALKAYYARQKCELFCFERCTGTKGANHMHIQAIPVPEGEAARGARMVLKADGLRFGMSFKEVPAGADLRQALQAKNYLYAEVPGEAPGSIIRLVHETSEALNDRGRPSIPLQFARDIAARLLLMPDRAQWKTCELSKDKETELAERFKEQFAEY 2469
++ ECWFCLA+P++E HL+ ++ +EAY+A+PKG + DHVLIVPIAH + LS +C+KE+ FKAAL+ Y A Q E+ F+R T GA H H+Q + +P E GA V + +G ++ + F+E+ A ++ A Q K+Y YAEVP + G + RL++ + +QF R AA L P RA WK C + K +E + + FK+ + +
Sbjct: 355 ERTECWFCLATPSVERHLIVSIGQEAYLAMPKGAINEDHVLIVPIAHEASTTRLSASCLKEITRFKAALREYNAAQDKEMILFDRNIATIGATHCHLQVVGIPR-ERDSGAYSVFQHEGEKYNVKFRELSADEEVEDATQGKSYFYAEVP-DGKGGVARLLNIVEDKQY--------MQFGRHAAACALGAPRRANWKYCVVPKPEEEAMTKAFKKMWEPF 565
BLAST of jgi.p|Trimin1|349161 vs. uniprot
Match: A0A2P4YVE0_9STRA (Nuclear protein n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YVE0_9STRA) HSP 1 Score: 168 bits (426), Expect = 1.900e-40 Identity = 97/235 (41.28%), Postives = 140/235 (59.57%), Query Frame = 1
Query: 1792 PHEGDQQRECWFCLASPTLEEHLVTNVAEEAYVALPKGGLVPDHVLIVPIAHIQRYSELSDACVKEVEAFKAALKAYYARQKCELFCFERCTGTKGANHMHIQAIPVPEGEAARGARMVLKADGLRFGMSFKEVP--AGA-------DLRQALQAKNYLYAEVPGEAPGSIIRLVHETSEALNDRGRPSIPLQFARDIAARLLLMPDRAQWKTCELSKDKETELAERFKEQFAEY 2469
PH +++ ECWFCLA+PTLE HL+ ++ +EAY+A+PKG + DH+LIVPIAH LS+A +E+E FKAAL+ Y+A Q EL +R T GA H H+Q + VP+ +AA AR V + +G ++ + F E+ AGA LRQ K++LY E+P + G +L+H G+ + QF R A+ LL MP RA WK C + K +E +L + FK Q+ +
Sbjct: 366 PHV-EERTECWFCLATPTLERHLIVSIGQEAYLAMPKGAICGDHLLIVPIAHEASTLALSEATWQEMERFKAALRRYFASQDKELLVIDRNVTTLGATHCHLQVVGVPKEKAAT-ARRVFETEGEKYHVKFHELQGEAGAASTGPLEQLRQRTNGKSFLYTELP-DGDGGTTQLLHHVE------GKHYV--QFGRHAASCLLEMPRRANWKFCVVPKPEEEKLTQTFKSQWKPF 589
BLAST of jgi.p|Trimin1|349161 vs. uniprot
Match: W2PY00_PHYPN (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2PY00_PHYPN) HSP 1 Score: 167 bits (424), Expect = 3.500e-40 Identity = 99/252 (39.29%), Postives = 139/252 (55.16%), Query Frame = 1
Query: 1780 RGGGPHEGDQQR----------ECWFCLASPTLEEHLVTNVAEEAYVALPKGGLVPDHVLIVPIAHIQRYSELSDACVKEVEAFKAALKAYYARQKCELFCFERCTGTKGANHMHIQAIPVPEGEAARGARMVLKADGLRFGMSFKEVPAGAD------------LRQALQAKNYLYAEVPGEAPGSIIRLVHETSEALNDRGRPSIPLQFARDIAARLLLMPDRAQWKTCELSKDKETELAERFKEQFAEY 2469
R GG G QQR ECWFCL++PTLE HL+ ++ +EAY+A+PKG + DH+LIVPIAH +LSD +E+E FKAAL+ Y+A Q EL +R T GA H H+Q + VP+ +A AR + + +G ++ + F E+ AD LRQ K +LY E+P + G RL+H G+ + QF R ++ LL MP RA WK C + K +E +L + FK Q+ Y
Sbjct: 347 RKGGLLPGQQQRNNRPLVEDRTECWFCLSTPTLERHLIVSIGQEAYLAMPKGAICGDHLLIVPIAHEASTLKLSDDTWREMERFKAALRRYFASQDKELLVIDRNVATLGATHCHLQVVGVPKDKAG-AARRIFETEGEKYHVKFHELLRDADEKTDAATGPLELLRQQTDDKPFLYVELP-DGQGGTTRLLHHVE------GKHYV--QFGRHASSCLLEMPRRANWKFCVVPKPEEVKLTQTFKSQWKPY 588 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349161 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_7898 ID=mRNA_7898|Name=jgi.p|Trimin1|349161|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2522bp|location=Sequence derived from alignment at Contig_37:943854..955063- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGTGAAGATCCTGGTCGCTGGCGAAGTGCAGGGGAAGTATAAGACTCTback to top protein sequence of jgi.p|Trimin1|349161 >Trimin1|349161|estExt_Genemark1.C_Ctg_370108 ID=Trimin1|349161|estExt_Genemark1.C_Ctg_370108|Name=jgi.p|Trimin1|349161|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=826bp MVKILVAGEVQGKYKTLFSKVAALNGGKAGPFDLLLCVGAFTSSDADGDLback to top mRNA from alignment at Contig_37:943854..955063- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_7898 ID=mRNA_7898|Name=jgi.p|Trimin1|349161|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=11210bp|location=Sequence derived from alignment at Contig_37:943854..955063- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_37:943854..955063- >mRNA_7898 ID=mRNA_7898|Name=jgi.p|Trimin1|349161|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2478bp|location=Sequence derived from alignment at Contig_37:943854..955063- (Tribonema minus UTEX_B_3156 )back to top |