Trimin1|349151|estExt_Genemark1.C_Ctg_370068 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|349151
Unique NameTrimin1|349151|estExt_Genemark1.C_Ctg_370068
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length354
Homology
BLAST of jgi.p|Trimin1|349151 vs. uniprot
Match: A0A835YYD8_9STRA (PapD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYD8_9STRA)

HSP 1 Score: 655 bits (1691), Expect = 5.130e-237
Identity = 353/353 (100.00%), Postives = 353/353 (100.00%), Query Frame = 0
Query:    1 MPEVSISPEVVFFSLARQGKPSCEITVSATAAGGHATFKVKTTEPSRYLVQPNQGLLEAGGSRSITIYMVEREASKLLDVAEEGTLGPCKDKFLVQVAPVEPEAFAAVTALEGARHTEEVTRLWANVNKASVKNKRIAVQFRHQASAASLPNQDALSSSRASDASHKPGVPGQAGSGRGLGAGGSIAEEVDALRTKYNDLVTYTANLTEERDTLRRSLEDAKRSLQKEMAARMALESKALKENLQPLSSDAGSGLAQLKAATPPARRQSGIGMRVVLLLVLLCAAYGWFTSTTRAAPKDAAQLPAPGDGAPPPGLHTPPAAEMVPEKAADTPNETFQEAPAAEATEQLQSDEL 353
            MPEVSISPEVVFFSLARQGKPSCEITVSATAAGGHATFKVKTTEPSRYLVQPNQGLLEAGGSRSITIYMVEREASKLLDVAEEGTLGPCKDKFLVQVAPVEPEAFAAVTALEGARHTEEVTRLWANVNKASVKNKRIAVQFRHQASAASLPNQDALSSSRASDASHKPGVPGQAGSGRGLGAGGSIAEEVDALRTKYNDLVTYTANLTEERDTLRRSLEDAKRSLQKEMAARMALESKALKENLQPLSSDAGSGLAQLKAATPPARRQSGIGMRVVLLLVLLCAAYGWFTSTTRAAPKDAAQLPAPGDGAPPPGLHTPPAAEMVPEKAADTPNETFQEAPAAEATEQLQSDEL
Sbjct:    1 MPEVSISPEVVFFSLARQGKPSCEITVSATAAGGHATFKVKTTEPSRYLVQPNQGLLEAGGSRSITIYMVEREASKLLDVAEEGTLGPCKDKFLVQVAPVEPEAFAAVTALEGARHTEEVTRLWANVNKASVKNKRIAVQFRHQASAASLPNQDALSSSRASDASHKPGVPGQAGSGRGLGAGGSIAEEVDALRTKYNDLVTYTANLTEERDTLRRSLEDAKRSLQKEMAARMALESKALKENLQPLSSDAGSGLAQLKAATPPARRQSGIGMRVVLLLVLLCAAYGWFTSTTRAAPKDAAQLPAPGDGAPPPGLHTPPAAEMVPEKAADTPNETFQEAPAAEATEQLQSDEL 353          
BLAST of jgi.p|Trimin1|349151 vs. uniprot
Match: A0A6H5KZG7_9PHAE (MSP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZG7_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 5.940e-36
Identity = 108/289 (37.37%), Postives = 149/289 (51.56%), Query Frame = 0
Query:    2 PEVSISPEVVFFSLARQGKPSCEITVSATAAGGHATFKVKTTEPSRYLVQPNQGLLEAGGSRSITIYMVEREASKLLD--VAEEGTLGPCKDKFLVQVAPVEPEAFAAVTALEGARHTEEVTRLWANVNKASVKNKRIAVQFRHQASAA---SLPNQDALSSSRASDA----SHKPGV----PGQAGSGRGL-------------------------GAGGS--------------IAEEVDALRTKYNDLVTYTANLTEERDTLRRSLEDAKRSLQKEMAARMALESK 238
            P V I+P+ + F L    +P C + VS  AAG    FKVKTTEP RYLV+PNQG++  G   ++ +Y++E+E + L+   V    +LG   DKFLVQ   +     A +T++  A+ TE +T++WA  NK +++NK++ V+    + AA   S  N  A +S   S A    S   G     PG   S  G+                         G GGS              + E    L  KY+DLV YTANLTEERD L  SLE+AK++LQ+EMA R+ALESK
Sbjct:   11 PLVDITPDTLSFELFPNSQPGCVLYVS-NAAGVTVAFKVKTTEPRRYLVRPNQGMIGPGEREAVNVYLIEKECNLLIHEGVQTPSSLGKVSDKFLVQTVGLGDGEAALLTSVAAAKQTEALTKIWATFNKTAIRNKKLNVRVSLASGAAKSLSAANNTAAASVAQSPARTVGSDSGGATFASPGSQTSPSGVAARGAYGSRNGGXXXXXXXXXXXGGGGGGSRGGVSRAGGVGGAGLDENSRVLANKYDDLVNYTANLTEERDELNASLEEAKKALQREMATRIALESK 298          
BLAST of jgi.p|Trimin1|349151 vs. uniprot
Match: D7G412_ECTSI (MSP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G412_ECTSI)

HSP 1 Score: 108 bits (270), Expect = 3.990e-24
Identity = 56/142 (39.44%), Postives = 87/142 (61.27%), Query Frame = 0
Query:    2 PEVSISPEVVFFSLARQGKPSCEITVSATAAGGHATFKVKTTEPSRYLVQPNQGLLEAGGSRSITIYMVEREASKLLD--VAEEGTLGPCKDKFLVQVAPVEPEAFAAVTALEGARHTEEVTRLWANVNKASVKNKRIAVQF 141
            P V I+P+ + F L    +P C + VS  AAG    FKVKTTEP RYLV+PNQG++  G   ++ +Y++E+E + L+   V    +LG   DKFLVQ   +     A +T++  A+ TE +T++WA  NK +++NK++ V+ 
Sbjct:   11 PLVDITPDTLSFELFPNSQPGCVLYVS-NAAGVTVAFKVKTTEPRRYLVRPNQGMIGPGEREAVNVYLIEKECNLLIHEGVQTPSSLGKVSDKFLVQTVGLGEGEAALLTSVAAAKQTEALTKIWATFNKTAIRNKKLNVRI 151          
BLAST of jgi.p|Trimin1|349151 vs. uniprot
Match: A0A7S0UGK8_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UGK8_9STRA)

HSP 1 Score: 107 bits (268), Expect = 4.000e-23
Identity = 89/246 (36.18%), Postives = 131/246 (53.25%), Query Frame = 0
Query:    9 EVVFFSLARQGKPSCEITVSATAAGGHAT----FKVKTTEPSRYLVQPNQGLLEAGGSRSITIYMVEREASKLL---DVAEEGTLGPCKDKFLVQVAPVEPEAFAAVTALEGARHTE---EVTRLWANVNKAS----VKNKRIAVQFRHQASAASLPNQDALSSSRASDASHKPGVPGQAGSGRGLG--AGGSIAEEVDALRTKYNDLVTYTANLTEERDTLRRSLEDAKRSLQKEMAARMALESK 238
            E+VF     +  P C +T+     GG +T    FKVKTT+P RYLV+PNQGL+  G S +I+I +VE++   LL   D   +  L   KDKFLVQ    +    +++ A +    TE    +T +W +V        ++NK++ V  RH   ++  P          SDA+  P    +A S   LG  +   I+ E+  LR KY++LV+++ NLT ERD L  +LE  KR   +E+AAR ALE+K
Sbjct:   13 ELVFSLSPNEATPRCMMTLKH---GGGSTESIAFKVKTTQPRRYLVRPNQGLIAPGTSETISILLVEKDKQVLLQNYDRLGQSGLDHSKDKFLVQSCAAD----SSLAAKKSGSQTELYDALTAMWNSVTSGGSSTPLQNKKLHV--RHVVDSSPAP--------ATSDAASTPKPKLEAASHSNLGDMSADQISSELSNLRRKYDELVSFSVNLTAERDILSNTLEQTKRDYNREIAARSALENK 241          
BLAST of jgi.p|Trimin1|349151 vs. uniprot
Match: K0R3I0_THAOC (MSP domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R3I0_THAOC)

HSP 1 Score: 108 bits (269), Expect = 4.440e-23
Identity = 87/239 (36.40%), Postives = 129/239 (53.97%), Query Frame = 0
Query:   33 GGHATFKVKTTEPSRYLVQPNQGLLEAGGSRSITIYMVEREASKLLDVAE---EGTLGPCKDKFLVQVAPVEPEAFAAV----TALEGARHTEEV----TRLWANV----NKASVKNKRIAVQFRHQASAASLPNQDALSSSRASDASHKPGVPGQAGSGRGLGAG----GSIAEEVDALRTKYNDLVTYTANLTEERDTLRRSLEDAKRSLQKEMAARMALESKALKENLQPLSSDAG 252
            GG+  FKVKTT+P RYLV+PNQG++  G S +++I +V+++  +L        +  L   KDKFLVQ   V P+ FAA     +  EG ++ +E+    T +W       ++ SV NK++ V+     SA S     A +SS  S      G+P    SG+   A       + +EV +LR KY++LV ++ NLT ERD L  +LE  KR L +E A R ALE + LK   +  S+ +G
Sbjct:   47 GGYLAFKVKTTQPRRYLVRPNQGIVAPGSSETVSILLVDKDRQQLRATYNRLGQSALDHSKDKFLVQSCAV-PDDFAAQFKNESRGEGGQYKKELVDALTSMWNKATSGGSEISVFNKKLHVKHSVGGSAGSGGTPAASASSPXSSGG---GLPATFDSGKRNNADKMSPDQLQDEVSSLRRKYDELVAFSVNLTAERDILNNTLEQTKRDLNRESATRTALEKQGLKVGSRSASTRSG 281          
BLAST of jgi.p|Trimin1|349151 vs. uniprot
Match: A0A1Z5K8X9_FISSO (Vesicle-associated membrane protein-associated protein A n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K8X9_FISSO)

HSP 1 Score: 102 bits (254), Expect = 2.790e-21
Identity = 82/239 (34.31%), Postives = 117/239 (48.95%), Query Frame = 0
Query:   13 FSLARQGK-PSCEITVS-ATAAGGHATFKVKTTEPSRYLVQPNQGLLEAGGSRSITIYMVEREASKLLDVAE---EGTLGPCKDKFLVQVAPVEPEAFAAVTALEGARHTEEVTRLWANV-NKASVKNKRIAVQFRHQASAASLPNQDALSSSRASDASHKPGVPGQAGSGRGLGAGGSIA---------------EEVDALRTKYNDLVTYTANLTEERDTLRRSLEDAKRSLQKEMA 230
            F+L+ Q + PSC + +    A+     FKVKTT+P RYLV+PNQGL+E GG++++ I +VE+E + LL   E   + TL   KDKFLVQ       A    + L   +  +E+T LWA V N  S     +A +  H                       K  V G   SG G GA G+ +                E+  +R KY++LV ++ NLT ERD L  +LE  KR L +E++
Sbjct:   23 FTLSNQEQSPSCSLELRHPDASSAPIAFKVKTTQPRRYLVRPNQGLIEPGGAQTVQILLVEKEKNSLLQSYERLGQPTLDQSKDKFLVQSV-----AILDASKLASLKDYDELTSLWATVGNSPSTSTSAVANKKLHV----------------------KHVVAGNKKSGSGDGAHGNSSISREPIENLTQDQAKAELTNMRRKYDELVAFSVNLTAERDMLNNTLEQTKRDLNRELS 234          
BLAST of jgi.p|Trimin1|349151 vs. uniprot
Match: A0A1E7FVV3_9STRA (MSP domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FVV3_9STRA)

HSP 1 Score: 100 bits (248), Expect = 1.920e-20
Identity = 81/209 (38.76%), Postives = 116/209 (55.50%), Query Frame = 0
Query:   38 FKVKTTEPSRYLVQPNQGLLEAGGSRSITIYMVEREASKLLDVAE---EGTLGPCKDKFLVQVAPVEPEAFAAVTALEGARHTEEVTRLWANV----NKASVKNKRIAVQFRHQASAA-SLPNQDALSSSRASDASHKPGVPGQAGSGRGLGAGGSIAEEVDALRTKYNDLVTYTANLTEERDTLRRSLEDAKRSLQKEMAARMALESK 238
            FKVKTT+P RYLV+PNQGL+  G S +I+I +VE++   LL   E   +  L   KDKFLVQ   V+ + FAA          + +T +W +V    + A+++NK++ V  RH  S + SL      S S+       P +     S     +   I+ E+  LR KY++LV+++ NLT ERD L  +LE  KR   +EMAAR ALE+K
Sbjct:   15 FKVKTTQPRRYLVRPNQGLIAPGTSETISILLVEKDKQALLQSYERLGQSGLDHSKDKFLVQSCTVD-KTFAAKKLGSQTDLYDALTTMWNSVTSGGSSAALQNKKLHV--RHIVSTSPSLAGTSNTSGSKGV----APRLETTQHSNMVEMSADQISSELSNLRRKYDELVSFSVNLTAERDILSNTLEQTKRDYNREMAARSALENK 216          
BLAST of jgi.p|Trimin1|349151 vs. uniprot
Match: A0A7R9WSF8_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WSF8_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 3.260e-20
Identity = 73/213 (34.27%), Postives = 117/213 (54.93%), Query Frame = 0
Query:   35 HATFKVKTTEPSRYLVQPNQGLLEAGGSRSITIYMVEREASKLLDVAE---EGTLGPCKDKFLVQVAPVEPEAFAAVTALEGARHTEEVTRLWANVN----KASVKNKRIAVQFRHQASAASLP--NQDALSSSRASDASHKPGVPGQAGSGRGLGAGGSIAEEVDALRTKYNDLVTYTANLTEERDTLRRSLEDAKRSLQKEMAARMALESK 238
            H  +K+KTT+P RYLV+PNQG++  GGS +++I ++E++   LL   E   +  L   KDKFLVQ   V   AF++    +     E +T +W +V+    +ASV ++++ V+ +   ++ + P      ++ S   +AS +  V   +           +  E+  LR KY+DLV+++ NLT ERD L  +LE  KR   +E A R ALESK
Sbjct:   41 HIAYKIKTTQPRRYLVRPNQGMIAPGGSDTVSILLIEKDKQILLQSYEKLGQTGLDHSKDKFLVQSCVVS-SAFSSKLTKDSTELYEALTSMWNSVSNKDSQASVSHRKMHVRHQVVDNSPTSPANGSKTVAKSFKREASSQANVDTMSTD--------QLKSELTNLRRKYDDLVSFSMNLTAERDILSNTLEQTKRDYNREQATRSALESK 244          
BLAST of jgi.p|Trimin1|349151 vs. uniprot
Match: A0A7S2XZQ3_9STRA (Hypothetical protein (Fragment) n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZQ3_9STRA)

HSP 1 Score: 100 bits (248), Expect = 4.040e-20
Identity = 90/264 (34.09%), Postives = 128/264 (48.48%), Query Frame = 0
Query:   38 FKVKTTEPSRYLVQPNQGLLEAGGSRSITIYMVEREASKLLDVAE-----EGTLGPCKDKFLVQVAPVEPEAFA-AVTALEGARHTEEVTRLWANVNKASVKNKRIAVQFRHQASAASLPNQDALSSSRASD------------------------------------------ASHKP----GVPGQAGSGRGLGAGGSIAE----EVDALRTKYNDLVTYTANLTEERDTLRRSLEDAKRSLQKEMAARMALESKALKENLQ 245
            FK+KTT+P RYLV+PNQGL+  G S++I I +V+++   LL+ A+     EG      DKFLVQ   +E   +   + +L     T+E+ +LW  V K  V+NKR+ V F      A +      SSSR  +                                          A++KP    G+     S     +  SI E    E+  LR KY+DLVT+T NLT ERD L + L+D+KR LQ+EM AR+A E+KA +  L+
Sbjct:   84 FKIKTTQPKRYLVRPNQGLILPGQSQTIEISLVDKDRIYLLNAAQAAGSTEGINRESTDKFLVQCFSMEVGYYRDRLQSLAPKEATDEIGKLWGVVGKKHVRNKRMRVLFNLPPPNAGVSTSG--SSSRRVELKDPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTATNKPNPFSGL--VKNSPAATASSSSIPEAQYAEMAKLRKKYDDLVTFTVNLTAERDMLNKELQDSKRDLQREMLARIATENKANRSGLR 343          
BLAST of jgi.p|Trimin1|349151 vs. uniprot
Match: A0A7S3LDL8_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LDL8_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 3.530e-19
Identity = 74/237 (31.22%), Postives = 113/237 (47.68%), Query Frame = 0
Query:    3 EVSISPEVVFFSLARQGKPSCEITVSATA-AGGHATFKVKTTEPSRYLVQPNQGLLEAGGSRSITIYMVEREASKLLDV---AEEGTLGPCKDKFLVQVAPVEPEAFAAVTALEGARHTEEVTRLWANVNKAS---VKNKRIAVQFRHQASAASLPNQDALSSSRASDASHKPGVPGQAGSGRG--LGAGGSIAEEVDALRTKYNDLVTYTANLTEERDTLRRSLEDAKRSLQKEMA 230
            E+S   E+ F   + +  P   IT+     + G   FKVKTT+P RYLV+PNQG++ AG +  + I +VE++ + L        +  L  CKDKFLVQ   + P    +    +G   TE  T+L +N N  S   + NK++ V                             G+  +  + RG  + AG     E++ ++ KY++LV ++ NLT ERD L  +LE  KR L + MA
Sbjct:    7 EISPESEIKFELSSGEATPKAVITLKHPGGSAGSVAFKVKTTQPRRYLVRPNQGIITAGKTEEVQILLVEKDKNSLYQSFLRLGQAALDNCKDKFLVQSTFLRPSDSLSAGDYDGL--TEFWTKLASNPNDPSLPPISNKKLTVIH--------------------------TGISSEGSTERGGTVPAGAGAETELEQMKKKYDELVAFSVNLTAERDVLNNTLEQTKRDLNRYMA 215          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349151 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YYD8_9STRA5.130e-237100.00PapD-like protein n=1 Tax=Tribonema minus TaxID=30... [more]
A0A6H5KZG7_9PHAE5.940e-3637.37MSP domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G412_ECTSI3.990e-2439.44MSP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S0UGK8_9STRA4.000e-2336.18Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
K0R3I0_THAOC4.440e-2336.40MSP domain-containing protein n=1 Tax=Thalassiosir... [more]
A0A1Z5K8X9_FISSO2.790e-2134.31Vesicle-associated membrane protein-associated pro... [more]
A0A1E7FVV3_9STRA1.920e-2038.76MSP domain-containing protein n=1 Tax=Fragilariops... [more]
A0A7R9WSF8_9STRA3.260e-2034.27Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S2XZQ3_9STRA4.040e-2034.09Hypothetical protein (Fragment) n=2 Tax=Fibrocapsa... [more]
A0A7S3LDL8_9STRA3.530e-1931.22Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 204..238
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 150..181
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 299..353
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 150..164
NoneNo IPR availablePANTHERPTHR10809:SF12VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN B/Ccoord: 35..230
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10Immunoglobulinscoord: 3..139
e-value: 1.2E-20
score: 75.5
IPR000535Major sperm protein (MSP) domainPFAMPF00635Motile_Spermcoord: 4..107
e-value: 3.9E-14
score: 52.4
IPR000535Major sperm protein (MSP) domainPROSITEPS50202MSPcoord: 3..142
score: 19.127388
IPR016763Vesicle-associated membrane-protein-associated proteinPANTHERPTHR10809VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEINcoord: 35..230
IPR008962PapD-like superfamilySUPERFAMILY49354PapD-likecoord: 4..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_37contigContig_37:585927..596223 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349151mRNA_7859Tribonema minus UTEX_B_3156 mRNAContig_37 585419..596223 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|349151|estExt_Genemark1.C_Ctg_370068 ID=Trimin1|349151|estExt_Genemark1.C_Ctg_370068|Name=jgi.p|Trimin1|349151|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=354bp
MPEVSISPEVVFFSLARQGKPSCEITVSATAAGGHATFKVKTTEPSRYLV
QPNQGLLEAGGSRSITIYMVEREASKLLDVAEEGTLGPCKDKFLVQVAPV
EPEAFAAVTALEGARHTEEVTRLWANVNKASVKNKRIAVQFRHQASAASL
PNQDALSSSRASDASHKPGVPGQAGSGRGLGAGGSIAEEVDALRTKYNDL
VTYTANLTEERDTLRRSLEDAKRSLQKEMAARMALESKALKENLQPLSSD
AGSGLAQLKAATPPARRQSGIGMRVVLLLVLLCAAYGWFTSTTRAAPKDA
AQLPAPGDGAPPPGLHTPPAAEMVPEKAADTPNETFQEAPAAEATEQLQS
DEL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR000535MSP_dom
IPR016763VAP
IPR008962PapD-like_sf