mRNA_7801 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|165357
Unique NamemRNA_7801
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|165357 vs. uniprot
Match: A0A835YVD5_9STRA (Glutathione S-transferase Mu 3-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVD5_9STRA)

HSP 1 Score: 462 bits (1189), Expect = 5.810e-165
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 1 
Query:    1 MPPAAAAAAVPTLGYMDARGIAEPIRCLLHYCNVNFNDKRYPDKAAWLREKHALGLPFPNLPYAGVKLTQTTAVLQHIGREQGLVGKSPAQVAEIDMLTHVALDMANGLICLCYSTPDQYHENLPNFIKQIPTWLDPLDAYLGTKDWFAGELSTADFVLYDRLSVFNAFQPGCVDSHASLKGFMERFRGLKVVSEYLASPEHMTRRVFGPESNWNFCEQN 660
            MPPAAAAAAVPTLGYMDARGIAEPIRCLLHYCNVNFNDKRYPDKAAWLREKHALGLPFPNLPYAGVKLTQTTAVLQHIGREQGLVGKSPAQVAEIDMLTHVALDMANGLICLCYSTPDQYHENLPNFIKQIPTWLDPLDAYLGTKDWFAGELSTADFVLYDRLSVFNAFQPGCVDSHASLKGFMERFRGLKVVSEYLASPEHMTRRVFGPESNWNFCEQN
Sbjct:    1 MPPAAAAAAVPTLGYMDARGIAEPIRCLLHYCNVNFNDKRYPDKAAWLREKHALGLPFPNLPYAGVKLTQTTAVLQHIGREQGLVGKSPAQVAEIDMLTHVALDMANGLICLCYSTPDQYHENLPNFIKQIPTWLDPLDAYLGTKDWFAGELSTADFVLYDRLSVFNAFQPGCVDSHASLKGFMERFRGLKVVSEYLASPEHMTRRVFGPESNWNFCEQN 220
[Close]
BLAST of jgi.p|Trimin1|165357 vs. uniprot
Match: A0A835Z2Z1_9STRA (Glutathione S-transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2Z1_9STRA)

HSP 1 Score: 243 bits (619), Expect = 5.770e-78
Identity = 118/213 (55.40%), Postives = 149/213 (69.95%), Query Frame = 1 
Query:   37 LGYMDARGIAEPIRCLLHYCNVNFNDKRYPDKAAWLREKHALGLPFPNLPY-----AGVKLTQTTAVLQHIGREQGLVGKSPAQVAEIDMLTHVALDMANGLICLCYSTPDQYHENLPNFIKQ-IPTWLDPLDAYLGTKDWFAGELSTADFVLYDRLSVFNAFQPGCVDSHASLKGFMERFRGLKVVSEYLASPEHMTRRVFG-PESNWNFCE 654
            LGY DARG+AE +RCLL YCNV F +K Y +   W +++HALGLPFPNLPY     +G+KLTQ+ A+LQH+GR  GLVGK+P Q+AE+++L ++A DM   L  +  + PD+Y      F K  +P WLD L+ YLGTK+W  G LSTADFV+YDRLSV N + PGCVD+ A LK + ERFR L  V +YLAS  H  R VFG P +NWNF E
Sbjct:   16 LGYWDARGVAEALRCLLTYCNVKFTEKVYTEMPQWQKDEHALGLPFPNLPYFIDSRSGLKLTQSNAILQHVGRSHGLVGKTPEQMAEVEVLVNLAFDMLMILSRVIIAPPDKYPRLYAEFAKNTVPAWLDQLETYLGTKEWLVGTLSTADFVIYDRLSVLNRYLPGCVDARAVLKAYAERFRTLPRVCDYLASAAHRERCVFGAPVTNWNFSE 228
[Close]
BLAST of jgi.p|Trimin1|165357 vs. uniprot
Match: A0A836CMK4_9STRA (Glutathione transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMK4_9STRA)

HSP 1 Score: 204 bits (520), Expect = 4.010e-63
Identity = 106/216 (49.07%), Postives = 138/216 (63.89%), Query Frame = 1 
Query:   34 TLGYMDARGIAEPIRCLLHYCNVNFNDKRYP-------DKAAWLREKHALGLPFPNLPY-----AGVKLTQTTAVLQHIGREQGLVGKSPAQVAEIDMLTHVALDMANGLICLCYSTPDQYHENLPNF-IKQIPTWLDPLDAYLGTKDWFAGELSTADFVLYDRLSVFNAFQPGCVDSHASLKGFMERFRGLKVVSEYLASPEHMTRRVFGPESNW 642
            TLGY   RG+AEP+RCLLH+CNV FND  Y        D + W   KH LGLPFPNLPY      G+K+TQ+ A+L+HIGRE  LVG +P + AE+DML  +A D+A GL  + Y+   ++ E + +   K  P WL  L  +LG+K+WFAG LS ADFVLY+RL V N   PG VD+HA+LK FM RF  L  V+E++AS EH + +     + W
Sbjct:    8 TLGYWSIRGLAEPLRCLLHHCNVKFNDVTYACGDAPGFDLSDWFNVKHKLGLPFPNLPYLIDEATGLKMTQSDAILRHIGREHNLVGSTPLEKAEVDMLVDLAKDIAMGLTRVVYNP--KFSELIGDLSTKTAPAWLQLLSDHLGSKEWFAGSLSIADFVLYERLDVLNHLIPGSVDAHANLKAFMTRFEALPRVAEFVASAEHKSLKFNNKMAVW 221
[Close]
BLAST of jgi.p|Trimin1|165357 vs. uniprot
Match: A0A1X7USE6_AMPQE (Glutathione transferase n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7USE6_AMPQE)

HSP 1 Score: 161 bits (407), Expect = 5.920e-46
Identity = 84/213 (39.44%), Postives = 117/213 (54.93%), Query Frame = 1 
Query:   37 LGYMDARGIAEPIRCLLHYCNVNFNDKRYPDKAA-------WLREKHALGLPFPNLPY---AGVKLTQTTAVLQHIGREQGLVGKSPAQVAEIDMLTHVALDMANGLICLCYSTPDQYHENLPNFIKQIPTWLDPLDAYLGTKDWFAG-ELSTADFVLYDRLSVFNAFQPGCVDSHASLKGFMERFRGLKVVSEYLASPEHMTRRVFGPESNW 642
            +GY   RG+A+PIR LL Y  + F +  Y    A       WL  KH LGLPFPNLPY     VK+TQT A+L ++GR+  L GK+ A +A +DML +VA+D  NG + LCYS+  Q       ++K +   L+ +  YLG K WFAG E++  DF  Y+       F P   D   +LK +M+RF  L  +  Y+ SPE +   +  P + W
Sbjct:   14 IGYWSIRGLAQPIRLLLKYAGIEFENVTYTQAEAPSFSREGWLSVKHTLGLPFPNLPYLIDGDVKITQTNAILTYLGRKANLYGKTEADMATVDMLLNVAMDFRNGFVRLCYSS--QMESMKEEYLKTVRAKLEEMSKYLGDKPWFAGNEITFPDFHFYEMFDQHKEFHPQLFDGLDNLKAYMDRFEALPAIKSYMDSPEFIRWPINNPIAQW 224
[Close]
BLAST of jgi.p|Trimin1|165357 vs. uniprot
Match: A0A7G9XZG5_9EUCA (Glutathione transferase n=1 Tax=Eriocheir hepuensis TaxID=168195 RepID=A0A7G9XZG5_9EUCA)

HSP 1 Score: 152 bits (384), Expect = 1.430e-42
Identity = 81/213 (38.03%), Postives = 118/213 (55.40%), Query Frame = 1 
Query:   31 PTLGYMDARGIAEPIRCLLHYCNVNFNDKRYP-------DKAAWLREKHALGLPFPNLPY---AGVKLTQTTAVLQHIGREQGLVGKSPAQVAEIDMLTHVALDMANGLICLCYSTPDQYHENLPNFIKQIPTWLDPLDAYLGTKDWFAGE-LSTADFVLYDRLSVFNAFQPGCVDSHASLKGFMERFRGLKVVSEYLASPEHMTRRVFGPES 636
            P LGY   R + +PIR LL Y  V + DKRY        DK  W   K  +G  FPNLPY     VK+TQT A+L+++GR+ GL GK+  +   +D+L + A+D+A+ L  +CY      ++  P F+K++P  +  L  +LG + WFAGE L+  DF++Y+ L       P C+D   +L+ F+ R   L  V EY+ASP  +   VF   S
Sbjct:    3 PILGYWKIRCLGQPIRLLLAYKRVEYEDKRYEVGDPPEYDKTCWFSVKFKMGFDFPNLPYYIDGNVKITQTLAILRYLGRKYGLEGKTEEEKIRVDVLANQAMDLADQLFTVCY----YQYDRKPQFLKELPAKMKQLSDFLGDRTWFAGETLTFVDFLIYEFLDEHRIVAPTCLDGVVNLQRFLARLEALPPVKEYMASPSFLPAPVFNKYS 211
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BLAST of jgi.p|Trimin1|165357 vs. uniprot
Match: E1U2Z2_CRAAR (Glutathione transferase n=2 Tax=Crassostrea TaxID=6564 RepID=E1U2Z2_CRAAR)

HSP 1 Score: 151 bits (382), Expect = 2.210e-42
Identity = 79/214 (36.92%), Postives = 123/214 (57.48%), Query Frame = 1 
Query:   28 VPTLGYMDARGIAEPIRCLLHYCNVNFNDKRYPD-------KAAWLREKHALGLPFPNLPY---AGVKLTQTTAVLQHIGREQGLVGKSPAQVAEIDMLTHVALDMANGLICLCYSTP-----DQYHENLPNFIKQIPTWLDPLDAYLGTKDWFAGE-LSTADFVLYDRLSVFNAFQPGCVDSHASLKGFMERFRGLKVVSEYLASPEHMTRRV 621
            +P LGY   RG+A+P+R LL+Y    F+D +Y         + AWL  K+ LGL FPNLPY     +K+TQ+ ++L++IG + GL+GK+P +  + DM+   A+D  NG++ LCY+       D Y  N+ + +KQ        D +LG K WFAG+ ++  DF +Y+ L      +PG +D + +L  F+ERF  L  +  Y+AS + M R +
Sbjct:    1 MPALGYWKIRGLAQPVRLLLNYVGEEFDDVQYEQGDAPEFSRDAWLSVKNTLGLAFPNLPYYIDGDIKVTQSNSILRYIGDKHGLLGKTPKEKVDCDMMVENAMDFRNGVVRLCYNKDYEKIKDDYFANVKDKLKQF-------DTFLGDKPWFAGDNITICDFPMYELLDQHRLMKPGILDDYPNLAKFVERFENLPKIKAYMASDKFMARPI 207
[Close]
BLAST of jgi.p|Trimin1|165357 vs. uniprot
Match: UPI001E1CCA9D (glutathione S-transferase Mu 2-like n=1 Tax=Portunus trituberculatus TaxID=210409 RepID=UPI001E1CCA9D)

HSP 1 Score: 150 bits (380), Expect = 5.560e-42
Identity = 83/213 (38.97%), Postives = 120/213 (56.34%), Query Frame = 1 
Query:   31 PTLGYMDARGIAEPIRCLLHYCNVNFNDKRYP-------DKAAWLREKHALGLPFPNLPY---AGVKLTQTTAVLQHIGREQGLVGKSPAQVAEIDMLTHVALDMANGLICLCYSTPDQYHENLPNFIKQIPTWLDPLDAYLGTKDWFAGE-LSTADFVLYDRLSVFNAFQPGCVDSHASLKGFMERFRGLKVVSEYLASPEHMTRRVFGPES 636
            P LGY   R +A+PIR LL Y  VN+ DK+Y        DK  W   K  LGL FPNLPY     VKL+QT A+L+++GR+ GL GK+  Q+  ID+L + A+D     + + Y     +++  P ++K++P  +     +LG   WFAGE L+ ADF++Y+ L       P C+D+   L+ FM RF  L+ + EY+A P  MT  +F   S
Sbjct:    3 PVLGYWKTRCLAQPIRLLLAYKRVNYEDKQYETGDPPEYDKTCWFSVKFNLGLDFPNLPYYIDGDVKLSQTLAILRYLGRKYGLEGKTEEQMRRIDILVNDAMDFEMQFVDVVY----YHYDRKPEYLKKLPEKIKEYSDFLGHHSWFAGEELTFADFLIYEFLDQHRVVFPSCLDAIPPLQRFMTRFESLESIREYMAGPTFMTAPLFSKYS 211
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BLAST of jgi.p|Trimin1|165357 vs. uniprot
Match: A0A6P8J063_ACTTE (Glutathione transferase n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8J063_ACTTE)

HSP 1 Score: 150 bits (378), Expect = 9.370e-42
Identity = 77/211 (36.49%), Postives = 120/211 (56.87%), Query Frame = 1 
Query:   31 PTLGYMDARGIAEPIRCLLHYCNVNFNDKRY-----PD--KAAWLREKHALGLPFPNLPY---AGVKLTQTTAVLQHIGREQGLVGKSPAQVAEIDMLTHVALDMANGLICLCYSTPDQYHENLPNFIKQIPTWLDPLDAYLGTKDWFAGELST-ADFVLYDRLSVFNAFQPGCVDSHASLKGFMERFRGLKVVSEYLASPEHMTRRVFGP 630
            P   Y D RG+A+PIR LLHY  +   DKRY     PD  + +WL+EK  LGL FPNLPY     +K+TQ+ A+L+HI R++ L G++  +   +DML +  +D  NG + LCY+    Y +  P +++ +   +     +LG + +F GE  T  DFV+Y+ L     F    ++ HA+LK ++ER   L  ++ Y+ S + +TR +  P
Sbjct:    3 PVFAYWDIRGLAQPIRLLLHYIELECEDKRYACGPAPDYSRESWLKEKFTLGLDFPNLPYYIDGDIKITQSNAILRHIARKKNLCGETEKEKVIVDMLENQLMDFRNGFVGLCYNAK-AYDDAKPKYLENVVPKIKAFADFLGEEKFFVGEKITFVDFVMYELLDQHKVFDASLLEPHANLKAYLERIEALPAIAAYMKSDKFITRPINNP 212
[Close]
BLAST of jgi.p|Trimin1|165357 vs. uniprot
Match: A0A443SD83_9ACAR (Glutathione transferase n=1 Tax=Leptotrombidium deliense TaxID=299467 RepID=A0A443SD83_9ACAR)

HSP 1 Score: 150 bits (378), Expect = 1.080e-41
Identity = 77/213 (36.15%), Postives = 127/213 (59.62%), Query Frame = 1 
Query:   37 LGYMDARGIAEPIRCLLHYCNVNFNDKRYP-------DKAAWLREKHALGLPFPNLPY---AGVKLTQTTAVLQHIGREQGLVGKSPAQVAEIDMLTHVALDMANGLICLCYSTPDQYHENLPNFIKQIPTWLDPLDAYLGTKDWFAGE-LSTADFVLYDRLSVFNAFQPGCVDSHASLKGFMERFRGLKVVSEYLASPEHMTRRVFGPESNW 642
            LGY D RG+ EPIR LLHY +V+F DKRY        D + W  EK+ LGL FPNLPY     +KL+Q+TA+L+++ R+  LVG++  +   +D+     +D+  GL+ + YS   +Y +N   ++K +P  L+ L  +LG + +  G+ L+  DF+LY+ L     F+   ++++ +LK ++ERF  L  + +Y+ S +     VFGP +++
Sbjct:    6 LGYWDLRGLTEPIRYLLHYADVDFEDKRYTVGPAPEFDTSEWTNEKNTLGLDFPNLPYIIEGDLKLSQSTAILRYLARKYKLVGETEEETIRLDLAEQQLVDVRTGLVKVAYSG-SEYEKNREEYLKTLPEKLELLSKFLGDRKFILGDKLTYVDFLLYEVLDFHRLFEATSLNAYENLKSYLERFEALPAIEKYMKSGKFSRLPVFGPMASF 217
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BLAST of jgi.p|Trimin1|165357 vs. uniprot
Match: Q70NR6_CRAGI (Glutathione transferase n=1 Tax=Crassostrea gigas TaxID=29159 RepID=Q70NR6_CRAGI)

HSP 1 Score: 149 bits (377), Expect = 1.250e-41
Identity = 79/207 (38.16%), Postives = 120/207 (57.97%), Query Frame = 1 
Query:   34 TLGYMDARGIAEPIRCLLHYCNVNFNDKRY-----PD--KAAWLREKHALGLPFPNLPYA---GVKLTQTTAVLQHIGREQGLVGKSPAQVAEIDMLTHVALDMANGLICLCYSTPDQYHENLPNFIKQIPTWLDPLDAYLGTKDWFAGE-LSTADFVLYDRLSVFNAFQPGCVDSHASLKGFMERFRGLKVVSEYLASPEHMTRRV 621
            TLGY + RG+ +PIR LL+Y    F+D +Y     PD  +  WL  K+ LGL FPN+PY     +K+TQ+ ++L++IG + GL+GK+P    + DM+   A+D  NG+I LCY   + Y +   ++   +   L   D +LG K WFAG+ ++  DF LY+ L      +PG +D + +L  F+ERF  L  +  Y+AS + M R V
Sbjct:    3 TLGYWNIRGLGQPIRLLLNYVGEEFDDVQYELGDAPDYSREEWLSVKNTLGLAFPNIPYYIDDDIKITQSNSILRYIGDKHGLLGKTPRDKVDCDMMVENAMDFRNGVIRLCYD--NDYEKIKDDYFANVKDKLRQFDTFLGDKPWFAGDGITICDFPLYELLDQHRLMKPGILDDYPNLTKFVERFENLPKIKAYMASDKFMARPV 207
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|165357 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YVD5_9STRA5.810e-165100.00Glutathione S-transferase Mu 3-like protein n=1 Ta... [more]
A0A835Z2Z1_9STRA5.770e-7855.40Glutathione S-transferase n=1 Tax=Tribonema minus ... [more]
A0A836CMK4_9STRA4.010e-6349.07Glutathione transferase n=1 Tax=Tribonema minus Ta... [more]
A0A1X7USE6_AMPQE5.920e-4639.44Glutathione transferase n=1 Tax=Amphimedon queensl... [more]
A0A7G9XZG5_9EUCA1.430e-4238.03Glutathione transferase n=1 Tax=Eriocheir hepuensi... [more]
E1U2Z2_CRAAR2.210e-4236.92Glutathione transferase n=2 Tax=Crassostrea TaxID=... [more]
UPI001E1CCA9D5.560e-4238.97glutathione S-transferase Mu 2-like n=1 Tax=Portun... [more]
A0A6P8J063_ACTTE9.370e-4236.49Glutathione transferase n=1 Tax=Actinia tenebrosa ... [more]
A0A443SD83_9ACAR1.080e-4136.15Glutathione transferase n=1 Tax=Leptotrombidium de... [more]
Q70NR6_CRAGI1.250e-4138.16Glutathione transferase n=1 Tax=Crassostrea gigas ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_37contigContig_37:7739..9254 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|165357|e_gw1.37.89.1
KEGG TC1.A.12.2.2,1.A.12.3.2
BRITEko00000,ko00001,ko01000,ko02000
KEGG rclassRC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944
KEGG ReactionR03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905
KEGG Pathwayko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418
KEGG koko:K00799
EC2.5.1.18
GOsGO:0001676,GO:0003674,GO:0003824,GO:0004364,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006518,GO:0006575,GO:0006629,GO:0006631,GO:0006633,GO:0006749,GO:0006790,GO:0006805,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009056,GO:0009058,GO:0009410,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019752,GO:0019899,GO:0032787,GO:0033218,GO:0034641,GO:0042178,GO:0042221,GO:0042277,GO:0042759,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043295,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044255,GO:0044272,GO:0044281,GO:0044283,GO:0044421,GO:0044424,GO:0044444,GO:0044464,GO:0045171,GO:0046394,GO:0046983,GO:0048037,GO:0050896,GO:0051186,GO:0051716,GO:0070887,GO:0071466,GO:0071704,GO:0072330,GO:0072341,GO:1900750,GO:1901564,GO:1901566,GO:1901576,GO:1901681,GO:1901685,GO:1901687
Preferred nameGSTM4
DescriptionGlutathione S-transferase Mu 1-like isoform X1
COG categoryO
Max annot lvl33208|Metazoa
EggNOG OGsKOG1695@1|root,KOG1695@2759|Eukaryota,3A1Z1@33154|Opisthokonta,3BQUN@33208|Metazoa,3D0SQ@33213|Bilateria,48QIH@7711|Chordata,48ZZS@7742|Vertebrata,3J9SA@40674|Mammalia,4JCS3@91561|Cetartiodactyla
Evalue3.42e-47
Seed ortholog59538.XP_005973635.1
Hectar predicted targeting categoryother localisation
TranscriptId165679
TrackFilteredModels1
ProteinId165357
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|165357gene_7801Tribonema minus UTEX_B_3156 geneContig_37 7739..9254 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|165357Trimin1|165357|e_gw1.37.89.1Tribonema minus UTEX_B_3156 polypeptideContig_37 7739..9254 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_7801_3exon_7801_3Tribonema minus UTEX_B_3156 exonContig_37 7739..8044 -
exon_7801_2exon_7801_2Tribonema minus UTEX_B_3156 exonContig_37 8883..9051 -
exon_7801_1exon_7801_1Tribonema minus UTEX_B_3156 exonContig_37 9067..9254 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_7801CDS_7801Tribonema minus UTEX_B_3156 CDSContig_37 9067..9254 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_7801 ID=mRNA_7801|Name=jgi.p|Trimin1|165357|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=663bp|location=Sequence derived from alignment at Contig_37:7739..9254- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCCACCAGCAGCAGCGGCGGCGGCGGTGCCCACCCTGGGCTATATGGA
CGCACGTGGCATCGCGGAGCCCATCCGCTGCCTGCTGCACTACTGCAACG
TCAACTTCAACGACAAGCGCTACCCAGACAAGGCCGCCTGGCTGCGCGAG
AAGCATGCACTGGGGCTGCCTTTCCCCAACCTGCCCTACGCAGGGGTCAA
GCTCACACAGACTACGGCTGTGCTGCAGCACATCGGGCGAGAGCAAGGGC
TGGTGGGCAAGTCGCCTGCCCAAGTGGCAGAAATCGACATGCTGACCCAC
GTGGCTCTGGACATGGCGAATGGGCTCATATGCCTCTGCTACTCGACACC
TGATCAGTACCACGAGAACCTCCCAAACTTCATCAAGCAGATACCCACCT
GGCTGGACCCACTGGACGCCTATCTGGGCACCAAGGACTGGTTTGCAGGC
GAGCTGAGCACTGCCGACTTTGTCCTCTATGACCGCCTCAGCGTGTTTAA
CGCTTTCCAGCCAGGCTGTGTGGACTCTCACGCCAGTCTCAAGGGGTTCA
TGGAGCGGTTCAGAGGGCTGAAAGTGGTGTCCGAGTACCTGGCGAGTCCT
GAGCACATGACGCGCAGGGTGTTCGGCCCAGAGTCGAACTGGAACTTCTG
CGAGCAGAATTGA
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protein sequence of jgi.p|Trimin1|165357

>Trimin1|165357|e_gw1.37.89.1 ID=Trimin1|165357|e_gw1.37.89.1|Name=jgi.p|Trimin1|165357|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=221bp
MPPAAAAAAVPTLGYMDARGIAEPIRCLLHYCNVNFNDKRYPDKAAWLRE
KHALGLPFPNLPYAGVKLTQTTAVLQHIGREQGLVGKSPAQVAEIDMLTH
VALDMANGLICLCYSTPDQYHENLPNFIKQIPTWLDPLDAYLGTKDWFAG
ELSTADFVLYDRLSVFNAFQPGCVDSHASLKGFMERFRGLKVVSEYLASP
EHMTRRVFGPESNWNFCEQN*
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mRNA from alignment at Contig_37:7739..9254-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_7801 ID=mRNA_7801|Name=jgi.p|Trimin1|165357|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1516bp|location=Sequence derived from alignment at Contig_37:7739..9254- (Tribonema minus UTEX_B_3156 )
ATGCCACCAGCAGCAGCGGCGGCGGCGGTGCCCACCCTGGGCTATATGGA
CGCACGTGGCATCGCGGAGCCCATCCGCTGCCTGCTGCACTACTGCAACG
TCAACTTCAACGACAAGCGCTACCCAGACAAGGCCGCCTGGCTGCGCGAG
AAGCATGCACTGGGGCTGCCTTTCCCCAACCTGCCCTAGTGGATCGACGA
CAGCGCAGGGGTCAAGCTCACACAGACTACGGCTGTGCTGCAGCACATCG
GGCGAGAGCAAGGGCTGGTGGGCAAGTCGCCTGCCCAAGTGGCAGAAATC
GACATGCTGACCCACGTGGCTCTGGACATGGCGAATGGGCTCATATGCCT
CTGCTACTCGACACCTGATCAGGTATGCCAGTGCACTTGTGTTCTGAAGT
CTAGTGGTGACTGCAATGCGAGCAGTCCTTCAAAGTTTCAGTGGAGGCAA
ACCCATGTGCTGAGGCAGAGGCACGTGGTGAGATATGGTGGACACATGTG
CCATACAGTACCCGGTAGTACCTGAACTGTTGTGAAATATGCACTCATAC
GCGCTATTGATATGCTGCATGCCGGTTGACGCCACCGTCCATCAAGCCAA
TGCGTTCATTTCCTCGTTGGCGTGCGCACACAGGTCAGAAGCAGTAGGTG
TGCAATGTAAACTTGCATACTATTATACTGTGCTACCGTTGGCAAAGACT
GCAATACTGTACTATCGCTGGCAGTCAGTATGCTGTAACATTGCAGCCTG
TCTGCGGCGGACATGGCGATGAGTCTATTGACTGTCAATCCAGATGGCTG
ACCCGCGCATGCGCCTGTGTTACTTGTATCCTAAACATATGCATGATTCA
AAACATAATAGGTGTATGTAAGTGCAAAACCAAGCTTGTCTGAGCCTGGA
GATGGAGAATGGTTGCGCTTGGATCAAGGTTAGAGCAAGACGAGGGTCGC
GACCTTTGCAGGTCAACTCTGACGCTCGTATACCCAGACTTGTGCTGCCT
GCAGTATCTTTTGACCCATGCTTCACTACACAGATCTTGAGTGGGTGCGC
CACTGCAAGACCAGATTTAGCACCATGCACTGGATCGCGGGCAAATGGCG
GATTGCTGGTCTAGTCACAAACTACGCCACCTACTCGCTAGAATCAAGTA
GGCCATGACTTATCTCATTGGCAATGTTTTCATGAAAATTGTGAACTTGT
GCCATCGCAGTACCACGAGAACCTCCCAAACTTCATCAAGCAGATACCCA
CCTGGCTGGACCCACTGGACGCCTATCTGGGCACCAAGGACTGGTTTGCA
GGCGAGCTGAGCACTGCCGACTTTGTCCTCTATGACCGCCTCAGCGTGTT
TAACGCTTTCCAGCCAGGCTGTGTGGACTCTCACGCCAGTCTCAAGGGGT
TCATGGAGCGGTTCAGAGGGCTGAAAGTGGTGTCCGAGTACCTGGCGAGT
CCTGAGCACATGACGCGCAGGGTGTTCGGCCCAGAGTCGAACTGGAACTT
CTGCGAGCAGAATTGA
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Coding sequence (CDS) from alignment at Contig_37:7739..9254-

>mRNA_7801 ID=mRNA_7801|Name=jgi.p|Trimin1|165357|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=663bp|location=Sequence derived from alignment at Contig_37:7739..9254- (Tribonema minus UTEX_B_3156 )
ATGCCACCAGCAGCAGCGGCGGCGGCGGTGCCCACCCTGGGCTATATGGA
CGCACGTGGCATCGCGGAGCCCATCCGCTGCCTGCTGCACTACTGCAACG
TCAACTTCAACGACAAGCGCTACCCAGACAAGGCCGCCTGGCTGCGCGAG
AAGCATGCACTGGGGCTGCCTTTCCCCAACCTGCCCTACGCAGGGGTCAA
GCTCACACAGACTACGGCTGTGCTGCAGCACATCGGGCGAGAGCAAGGGC
TGGTGGGCAAGTCGCCTGCCCAAGTGGCAGAAATCGACATGCTGACCCAC
GTGGCTCTGGACATGGCGAATGGGCTCATATGCCTCTGCTACTCGACACC
TGATCAGTACCACGAGAACCTCCCAAACTTCATCAAGCAGATACCCACCT
GGCTGGACCCACTGGACGCCTATCTGGGCACCAAGGACTGGTTTGCAGGC
GAGCTGAGCACTGCCGACTTTGTCCTCTATGACCGCCTCAGCGTGTTTAA
CGCTTTCCAGCCAGGCTGTGTGGACTCTCACGCCAGTCTCAAGGGGTTCA
TGGAGCGGTTCAGAGGGCTGAAAGTGGTGTCCGAGTACCTGGCGAGTCCT
GAGCACATGACGCGCAGGGTGTTCGGCCCAGAGTCGAACTGGAACTTCTG
CGAGCAGAATTGA
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